Pregenerated sensors for ESYT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037681Ensembl transcript IDs: ENSMUST00000042158.13, ENSMUST00000187520.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCCGCCATAACCGCTCTGTTGCATTCTTTACAGAGCATCAGGGATaGCTGGCTCAGAGGGCAAAGGTCATCTGTTGCACAAGCCTGCCC | + |
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Preference number: 1 (lower is better) Translates to: CRHNRSVAFFTEHQG*LAQRAKVICCTSLP Trigger: GGGCAGGCTTGTGCAACAGATGACCTTTGCCCTCTGAGCCAGCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGCGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 90 bp | GTCATACATTGTAGTGTTGTCTGGCCTGAACTCACAGAGACTACCTaGCTCAGCCTCCCAGGGCTGGGACTAAAGACATTTGCCGCCATA | + |
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Preference number: 1 (lower is better) Translates to: VIHCSVVWPELTETT*LSLPGLGLKTFAAI Trigger: TATGGCGGCAAATGTCTTTAGTCCCAGCCCTGGGAGGCTGAGGCAGGTAGTCTCTGTGAGTTCAGGCCAGACAACACTACAATGTATGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CCA 90 bp | GACGGTGCTACACAGGAAGAGACCATTCCAGTATGGACTGGCCATTaGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: DGATQEETIPVWTGH*KGRHSIWTVLCPQD Trigger: ATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAATGGCCAGTCCATACTGGAATGGTCTCTTCCTGTGTAGCACCGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR TCA 90 bp | TGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACACTaGGAATTGTTAAAATGGACGGTGCTACACAGGAAGAGACCATTC | + |
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Preference number: 1 (lower is better) Translates to: CRPGWPRTQRSTCLH*ELLKWTVLHRKRPF Trigger: GAATGGTCTCTTCCTGTGTAGCACCGTCCATTTTAACAATTCTCAGTGTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 90 bp | GAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTaGGGAATGAACACACATCTGCGCAAGAATACAGTAGCAGAAACC | + |
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Preference number: 1 (lower is better) Translates to: ERTAQYLDCSVSSGC*GMNTHLRKNTVAET Trigger: GGTTTCTGCTACTGTATTCTTGCGCAGATGTGTGTTCATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 90 bp | TTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATaGTGCGGAATGAACACACATCTGCGCAAGAATACAGTAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: LERTAQYLDCSVSSG*CGMNTHLRKNTVAE Trigger: TTCTGCTACTGTATTCTTGCGCAGATGTGTGTTCATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR TCA 90 bp | GCAAATGTAGGCTTACAAGCAACCAGGGTTAGCTCTGGGTGGCTTTaGCTTTGGATGCTTTTTATTTCCACAAGAGTGCTCTCCTGTGCT | + |
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Preference number: 1 (lower is better) Translates to: ANVGLQATRVSSGWL*LWMLFISTRVLSCA Trigger: AGCACAGGAGAGCACTCTTGTGGAAATAAAAAGCATCCAAAGTCAAAGCCACCCAGAGCTAACCCTGGTTGCTTGTAAGCCTACATTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CCA 90 bp | TGTCTGAATGGGTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTaGTCTTACAAACTGAAATGTGTAAAAGGCACTTGTTTAAATACA | + |
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Preference number: 1 (lower is better) Translates to: CLNGWLTLETEQKSI*SYKLKCVKGTCLNT Trigger: TGTATTTAAACAAGTGCCTTTTACACATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCCATTCAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CCA 90 bp | AAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACACGTATGGACTGGCCATTaGAAAGGACGGCACAGTATC | + |
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Preference number: 2 (lower is better) Translates to: KFLCRPGWPRTQRSTCLHVWTGH*KGRHSI Trigger: GATACTGTGCCGTCCTTTCCAATGGCCAGTCCATAC...GTGTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CAA 90 bp | GGACGGTGCTACACAGGAAGAGACCATTCCAGTATGGACTGGCCATaGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GRCYTGRDHSSMDWP*ERTAQYLDCSVSSG Trigger: TCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAATGGCCAGTCCATACTGGAATGGTCTCTTCCTGTGTAGCACCGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR GCA 90 bp | CAAGTTCTGGGACCAGGCCCAGGCAGAACATTGCCATTTTTGTTGAGACTCAGTGCAAAGGTCATCTGTTaGACAAGCCTGCCCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: QVLGPGPGRTLPFLLRLSAKVIC*TSLPRT Trigger: GGTTCTGGGCAGGCTTGTGCAACAGATGACCTTTGC...ACTGAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCCTGGTCCCAGAACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGAATCTCTTAACATGTCTTTaGGCGAACAGCAGGACTTCG | + |
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Preference number: 2 (lower is better) Translates to: GKDGTVSGLFCVLRMLRNLLTCL*ANSRTS Trigger: CGAAGTCCTGCTGTTCGCCCAAAGACATGTTAAGAG...ATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGAATGTGAAAAGTCACCTCTaGGGTTTTGGAGCCTCATTA | + |
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Preference number: 2 (lower is better) Translates to: GKDGTVSGLFCVLRMLRNVKSHL*GFGASL Trigger: TAATGAGGCTCCAAAACCTCAGAGGTGACTTTTCAC...ATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR TCA 90 bp | AAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACACAAGGAAAAGCATCATTaGAGACAACAGGAACATAGC | + |
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Preference number: 2 (lower is better) Translates to: KFLCRPGWPRTQRSTCLHKEKHH*RQQEHS Trigger: GCTATGTTCCTGTTGTCTTCAATGATGCTTTTCCTT...GTGTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGATTATTGTCTGAATaGGTGGCTTACCCTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: GFLYVACPRSSSVDQAGLGLLSE*VAYPRN Trigger: GTTTCTAGGGTAAGCCACCCATTCAGACAATAATCC...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CAA 90 bp | AAGGTCATCTGTTGCACAAGCCTGCCCAGAACCTACAGAAAGTGTTaGATGCCCACGTGTGCTGTGACACGTGACATCCTACACAGAATA | + |
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Preference number: 2 (lower is better) Translates to: KVICCTSLPRTYRKC*MPTCAVTRDILHRI Trigger: TATTCTGTGTAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCTGGGCAGGCTTGTGCAACAGATGACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR TCA 90 bp | AGAACCTACAGAAAGTGTTTGATGCCCACGTGTGCTGTGACACGTGACATCCTAAGCTCTGGGTGGCTTTaGCTTTGGATGCTTTTTATT | + |
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Preference number: 2 (lower is better) Translates to: RTYRKCLMPTCAVTRDILSSGWL*LWMLFI Trigger: AATAAAAAGCATCCAAAGTCAAAGCCACCCAGAGCT...TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGTTCAGACATAGACCTTaGTTTGGGGCTGGGCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMFRHRP*FGAGLK Trigger: TTTGAGCCCAGCCCCAAACCAAGGTCTATGTCTGAA...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR GCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGAACAGAAACAGTCCCTaGTTTTACATGACCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMNRNSP*FYMTFL Trigger: GAGGAAGGTCATGTAAAAGCAGGGACTGTTTCTGTT...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | AGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACCCTCTTAACATGTCTTaGGGCGAACAGCAGGACTTC | + |
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Preference number: 3 (lower is better) Translates to: RSSSVDQAGLGLRDPPAYPLNMS*GEQQDF Trigger: GAAGTCCTGCTGTTCGCCCAAAGACATGTTAAGAGG...GTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 72 bp | CAGGGATGGCTGGCTCAGAGGGCAAAGGTCATCTGTTaGACAAGCCTGCCCAGAACCTACAGAAAGTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: QGWLAQRAKVIC*TSLPRTYRKCL Trigger: CAAACACTTTCTGTAGGTTCTGGGCAGGCTTGTGCAACAGATGACCTTTGCCCTCTGAGCCAGCCATCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CCA 72 bp | GCTCTGTTGCATTCTTTACAGAGCATCAGGGATGGCTaGCTCAGAGGGCAAAGGTCATCTGTTGCACAAGCC | + |
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Preference number: 3 (lower is better) Translates to: ALLHSLQSIRDG*LRGQRSSVAQA Trigger: GGCTTGTGCAACAGATGACCTTTGCCCTCTGAGCCAGCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGAATGGCCCAGGCAGAACATaGCCATTTTTGTTGAGACTC | + |
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Preference number: 3 (lower is better) Translates to: GKDGTVSGLFCVLRMLRNGPGRT*PFLLRL Trigger: GAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCC...ATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACACTGGGTGGCTTTGACTTaGGATGCTTTTTATTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: KFLCRPGWPRTQRSTCLHWVALT*DAFYFH Trigger: GTGGAAATAAAAAGCATCCAAAGTCAAAGCCACCCA...GTGTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | ATTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGGCCATAACCGCTCTGTaGCATTCTTTACAGAGCATC | + |
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Preference number: 3 (lower is better) Translates to: IGKDGTVSGLFCVLRMLRAITAL*HSLQSI Trigger: GATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGC...CCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 72 bp | TTATTTCCACAAGAGTGCTCTCCTGTGCTCAGTAACTaGCCAGGAGTTACTCTAAACAGGCTCCCTCCCCCA | + |
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Preference number: 3 (lower is better) Translates to: LFPQECSPVLSN*PGVTLNRLPPP Trigger: TGGGGGAGGGAGCCTGTTTAGAGTAACTCCTGGGCAGTTACTGAGCACAGGAGAGCACTCTTGTGGAAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | CAAGTTCTGGGACCAGGCCCAGGCAGAACATTGCCATTTTTGTTGAGACTCAGTACCTACAGAAAGTGTTaGATGCCCACGTGTGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: QVLGPGPGRTLPFLLRLSTYRKC*MPTCAV Trigger: CACAGCACACGTGGGCATCAAACACTTTCTGTAGGT...ACTGAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCCTGGTCCCAGAACTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | ATTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGTCATACATTGTAGTGTaGTCTGGCCTGAACTCACAG | + |
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Preference number: 3 (lower is better) Translates to: IGKDGTVSGLFCVLRMLRSYIVV*SGLNSQ Trigger: CTGTGAGTTCAGGCCAGACAACACTACAATGTATGA...CCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 72 bp | ACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATaGTGCGGAATGAACACACATCTGCGCAAGAATACA | + |
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Preference number: 3 (lower is better) Translates to: TAQYLDCSVSSG*CGMNTHLRKNT Trigger: TGTATTCTTGCGCAGATGTGTGTTCATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACACAGAACATTGCCATTTTaGTTGAGACTCAGTCATACA | + |
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Preference number: 3 (lower is better) Translates to: KFLCRPGWPRTQRSTCLHRTLPF*LRLSHT Trigger: TGTATGACTGAGTCTCAACAAAAATGGCAATGTTCT...GTGTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR TCA 72 bp | TGGGACCAGGCCCAGGCAGAACATTGCCATTTTTGTTaGGACTCAGTCATACATTGTAGTGTTGTCTGGCCT | + |
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Preference number: 3 (lower is better) Translates to: WDQAQAEHCHFC*DSVIHCSVVWP Trigger: AGGCCAGACAACACTACAATGTATGACTGAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCCTGGTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR GCA 72 bp | GCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTaGGGAATGAACACACATCTGCGCAAGAATACAGTA | + |
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Preference number: 3 (lower is better) Translates to: AQYLDCSVSSGC*GMNTHLRKNTV Trigger: TACTGTATTCTTGCGCAGATGTGTGTTCATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR TCA 72 bp | GGCTTACAAGCAACCAGGGTTAGCTCTGGGTGGCTTTaGCTTTGGATGCTTTTTATTTCCACAAGAGTGCTC | + |
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Preference number: 3 (lower is better) Translates to: GLQATRVSSGWL*LWMLFISTRVL Trigger: GAGCACTCTTGTGGAAATAAAAAGCATCCAAAGTCAAAGCCACCCAGAGCTAACCCTGGTTGCTTGTAAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CCA 72 bp | TGCAGCCTCCTGAACCTAGAGTTCAGACATAGACCTTaGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: CSLLNLEFRHRP*FGAGLKISYGN Trigger: ATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCTATGTCTGAACTCTAGGTTCAGGAGGCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR-3UTR CAA 90 bp | GGATTATTGTCTGAATGGGTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGACATAGACCTTGGTTaGGGGCTGGGCTCAAAATTT | + |
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Preference number: 3 (lower is better) Translates to: GLLSEWVAYPRNRTEVYLDIDLG*GLGSKF Trigger: AAATTTTGAGCCCAGCCCCAAACCAAGGTCTATGTC...CAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCCATTCAGACAATAATCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CCA 72 bp | CAACAGGAACATAGCAGGGATTATTGTCTGAATGGGTaGCTTACCCTAGAAACAGAACAGAAGTCTATCTGG | + |
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Preference number: 3 (lower is better) Translates to: QQEHSRDYCLNG*LTLETEQKSIW Trigger: CCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCCATTCAGACAATAATCCCTGCTATGTTCCTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR TCA 72 bp | CAGGGCACTGATGTGAACAAAGTGAAAAGTCACCTCTaGGGTTTTGGAGCCTCATTAGAGATACAAATACCA | + |
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Preference number: 3 (lower is better) Translates to: QGTDVNKVKSHL*GFGASLEIQIP Trigger: TGGTATTTGTATCTCTAATGAGGCTCCAAAACCTCAGAGGTGACTTTTCACTTTGTTCACATCAGTGCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CCA 72 bp | GGGTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTaGTCTTACAAACTGAAATGTGTAAAAGGCACTTGT | + |
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Preference number: 3 (lower is better) Translates to: GWLTLETEQKSI*SYKLKCVKGTC Trigger: ACAAGTGCCTTTTACACATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCAGCTCGGGCAGTAGCTaGCCCGACAGGCGCGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: GFLYVACPRSSSVDQAGLSSGSS*PDRRGP Trigger: CGGACCGCGCCTGTCGGGCCAGCTACTGCCCGAGCT...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCGCAGGGGCTCCAGAATaGCACGCAGGGTCCCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GFLYVACPRSSSVDQAGLAGAPE*HAGSPA Trigger: TGCAGGGGACCCTGCGTGTCATTCTGGAGCCCCTGC...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | AGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACCCTCGTGAGTGGCCATaGGAATGGGAAGGCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: RSSSVDQAGLGLRDPPAYPREWP*EWEGRA Trigger: CGCCCTGCCTTCCCATTCGCATGGCCACTCACGAGG...GTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | GGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGAATTTTGGGCTCCGGGCCTaGCCCCTGGGGCTCAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: GKDGTVSGLFCVLRMLRNFGLRA*PLGLRH Trigger: ATGCCTGAGCCCCAGGGGCCAGGCCCGGAGCCCAAA...ATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AACTGCCCAGGAGTTACTCTAAACAGGCTCCCTCCCCCACATCCCCGTGCTGGGCGCCCATCTTCTCTCTaGCAGCAGGTAGATGCGGAC | + |
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Preference number: 4 (lower is better) Translates to: NCPGVTLNRLPPPHPRAGRPSSL*QQVDAD Trigger: GTCCGCATCTACCTGCTGCCAGAGAGAAGATGGGCG...CCCAGCACGGGGATGTGGGGGAGGGAGCCTGTTTAGAGTAACTCCTGGGCAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | AACTGCCCAGGAGTTACTCTAAACAGGCTCCCTCCCCCACATCCCCGTGCTGGGCTGTCACAGCTCCTATaGAGGGCTTGTCCACCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NCPGVTLNRLPPPHPRAGLSQLL*RACPPA Trigger: TGCTGGTGGACAAGCCCTTCATAGGAGCTGTGACAG...CCCAGCACGGGGATGTGGGGGAGGGAGCCTGTTTAGAGTAACTCCTGGGCAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGCCAGGGAGTTGAGTaGGGACATGCTGGGAGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GFLYVACPRSSSVDQAGLGQGVE*GHAGSH Trigger: GTGGCTCCCAGCATGTCCTCACTCAACTCCCTGGCC...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | AGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACTCACCCAGCCGTCCCTaGCTGGAATCCCCAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: RSSSVDQAGLGLRDPPAYSPSRP*LESPAS Trigger: TGAAGCTGGGGATTCCAGGCAGGGACGGCTGGGTGA...GTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCGCACAGTCACACGGTTaGGCAGCACCAGGTGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GFLYVACPRSSSVDQAGLAQSHG*AAPGGQ Trigger: CTGCCCACCTGGTGCTGCCCAACCGTGTGACTGTGC...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | ATTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGCACTGTCCTTGCCTTTaGGCTCCGGGCCTGGCCCCT | + |
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Preference number: 4 (lower is better) Translates to: IGKDGTVSGLFCVLRMLRHCPCL*APGLAP Trigger: AGGGGCCAGGCCCGGAGCCCAAAGGCAAGGACAGTG...CCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCACACTCCAGCCGCAGGTaGAGCCGCCCACTGGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSHSSRR*SRPLVV Trigger: CACGACCAGTGGGCGGCTGCACCTGCGGCTGGAGTG...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGTGGGAGCCACCCTCGTaGGTGGCCATGCGAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWWEPPS*VAMRMG Trigger: TCCCATTCGCATGGCCACTCACGAGGGTGGCTCCCA...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGATCCAGGCTGGCAAATaGTGGCCCCGCAGCTCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWIQAGK*WPRSSR Trigger: CCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGAT...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | ACATTTGCCGCCATAACCGCTCTGTTGCATTCTTTACAGAGCATCAGGGATGGCTCCACCTCCAGGTCCTaGCCAGGTACCTCGTACACC | + |
|
Preference number: 4 (lower is better) Translates to: TFAAITALLHSLQSIRDGSTSRS*PGTSYT Trigger: GGTGTACGAGGTACCTGGGCAGGACCTGGAGGTGGA...GCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGCGGCAAATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCAGGTGCAGCCGCCCACTaGTCGTGTCATTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSGAAAH*SCHSGQ Trigger: TTGCCCTGAATGACACGACCAGTGGGCGGCTGCACC...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCAGTCGGGTCCAGTGTATaGGCTTCCCAGCTCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSVGSSV*ASQLSS Trigger: GGACGAGAGCTGGGAAGCCCATACACTGGACCCGAC...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCTGCAGGTGCGGCTTTTaGAGGAAGAACACTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GFLYVACPRSSSVDQAGLCRCGF*RKNTVT Trigger: TGTGACAGTGTTCTTCCTTCAAAAGCCGCACCTGCA...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | GGGTTTCTCTATGTAGCCTGTCCCAGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGTCTTCTGTTTTACTaGGGTCTTCTTCCGACTCGC | + |
|
Preference number: 4 (lower is better) Translates to: GFLYVACPRSSSVDQAGLGLLFY*GLLPTR Trigger: GCGAGTCGGAAGAAGACCTCAGTAAAACAGAAGACC...GAGGCCAGCCTGGTCTACAGAGGAACTTCTGGGACAGGCTACATAGAGAAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCACTCCTTCCTTCTGTGTaGGCCGAGAGGCCTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSLLPSV*AERPAV Trigger: AACAGCAGGCCTCTCGGCTCACACAGAAGGAAGGAG...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | AAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACACGGTTTCTCGGCAGGTTaGAGGCATTCTCTAAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KFLCRPGWPRTQRSTCLHGFSAG*RHSLRR Trigger: TCTTCTTAGAGAATGCCTGCAACCTGCCGAGAAACC...GTGTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CAA 72 bp | TCAGGGATGGCTGGCTCAGAGGGCAAAGGTCATCTGTaGCACAAGCCTGCCCAGAACCTACAGAAAGTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGMAGSEGKGHL*HKPAQNLQKVF Trigger: AAACACTTTCTGTAGGTTCTGGGCAGGCTTGTGCAACAGATGACCTTTGCCCTCTGAGCCAGCCATCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCATGAACTCGCGCTCGTaGTCCAGGAATTCGAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSEHYCVIKAGQPQPPKFMNSRS*SRNSKA Trigger: CGCCTTCGAATTCCTGGAGCACGAGCGCGAGTTCAT...GAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCATCTCCAAGGCAGATCTaGAGGCTGCCCAGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSSPRQI*RLPRKS Trigger: TGACTTCCTGGGCAGCCTGCAGATCTGCCTTGGAGA...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGTCGGCTGCCACGCTGTaGACAAAGAAGGAGAACACC | + |
|
Preference number: 4 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWSAATL*TKKENT Trigger: GGTGTTCTCCTTCTTTGTGCACAGCGTGGCAGCCGA...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | GGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGAATCAGCTCCACTGCTGGTaGATGGTGTTAAGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GKDGTVSGLFCVLRMLRNQLHCW*MVLSFC Trigger: GCAGAAACTTAACACCATGCACCAGCAGTGGAGCTG...ATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | ACATTTGCCGCCATAACCGCTCTGTTGCATTCTTTACAGAGCATCAGGGATGGCGAAATGTATCCAGGCTaGCAAATGCTGGCCCCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TFAAITALLHSLQSIRDGEMYPG*QMLAPQ Trigger: CTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTC...GCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGCGGCAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGAGCCAATGCTCACCTTaGCGTAGGGGTCTGACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWSQCSP*RRGLTC Trigger: GCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCT...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCATCTGAAGTTCCACGCTaGTCTCACAGTCCCCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSSEVPR*SHSPRC Trigger: ACATCGGGGACTGTGAGATCAGCGTGGAACTTCAGA...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS-3UTR TCA 90 bp | AGACCTTGGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAATAATGCCACATACGCTCATGGGTCTGGGTaGCTTGATGGGCCCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RPWFGAGLKISYGNNATYAHGSG*LDGPWR Trigger: TCTCCAGGGCCCATCAAGTCACCCAGACCCATGAGC...GTATGTGGCATTATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGCACTGCGACATCCAGTaGTCTCTTCTGCACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWHCDIQ*SLLHFS Trigger: GGAGAAGTGCAGAAGAGATCACTGGATGTCGCAGTG...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | CAGAGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCAATGCTGCAAGCCAATaGTCACCTTGGCGTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSEHYCVIKAGQPQPPKFNAASQ*SPWRRG Trigger: ACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATT...GAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCATCCACACAGGGTCCTTaGTGTGGGGACAAGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CHIPEVCPLGFPRACNSSSTQGP*CGDKSY Trigger: GTAAGACTTGTCCCCACAGCAAGGACCCTGTGTGGA...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | ACATTTGCCGCCATAACCGCTCTGTTGCATTCTTTACAGAGCATCAGGGATGGCAGGGGTCAGCTCCACTaGTGGTGCATGGTGTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFAAITALLHSLQSIRDGRGQLH*WCMVLS Trigger: ACTTAACACCATGCACCAGCAGTGGAGCTGACCCCT...GCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGCGGCAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGCAGGCTGGCAAATGCTaGCCCCGCAGCTCACGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMQAGKC*PRSSRL Trigger: CAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTG...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACATACTTCATTCCAGGTaGGGTTCAGGTTCTTGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSSSVDQAGLGLRDPPAYILHSR*GSGSCR Trigger: TCTACAAGAACCTGAACCCCACCTGGAATGAAGTAT...GTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | CAAGTTCTGGGACCAGGCCCAGGCAGAACATTGCCATTTTTGTTGAGACTCAGTAAGAAGGAGAACACCTaGCTCCACACAGGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLGPGPGRTLPFLLRLSKKENT*LHTGSL Trigger: CAAGGACCCTGTGTGGAGCCAGGTGTTCTCCTTCTT...ACTGAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCCTGGTCCCAGAACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AGAACCTACAGAAAGTGTTTGATGCCCACGTGTGCTGTGACACGTGACATCCTAGGGGCTTTACAACCCTaGTTGGTGGCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTYRKCLMPTCAVTRDILGALQP*LVATFL Trigger: CAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCC...TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AGACCTTGGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAATAATGCCACATACAGCCACCCTCGTGAGTaGCCATGCGAATGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RPWFGAGLKISYGNNATYSHPRE*PCEWEG Trigger: GCCTTCCCATTCGCATGGCCACTCACGAGGGTGGCT...GTATGTGGCATTATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| 3UTR CAA 72 bp | TGTTGCACAAGCCTGCCCAGAACCTACAGAAAGTGTTaGATGCCCACGTGTGCTGTGACACGTGACATCCTA | + |
|
Preference number: 4 (lower is better) Translates to: CCTSLPRTYRKC*MPTCAVTRDIL Trigger: TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCTGGGCAGGCTTGTGCAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | AGACCTTGGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAATAATGCCACATACCTGTCCAGGCCTGAGTaGTCCAGCTGGAAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPWFGAGLKISYGNNATYLSRPE*SSWKHC Trigger: ACAGTGCTTCCAGCTGGATCACTCAGGCCTGGACAG...GTATGTGGCATTATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | GGATTATTGTCTGAATGGGTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGAGGCTGTCCAGGCCTaGGTGATCCAGCTGGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GLLSEWVAYPRNRTEVYLEAVQA*VIQLEA Trigger: TGCTTCCAGCTGGATCACTCAGGCCTGGACAGCCTC...CAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCCATTCAGACAATAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | ACATTTGCCGCCATAACCGCTCTGTTGCATTCTTTACAGAGCATCAGGGATGGCTCCAGTGATCTCTTCTaGACTTCTCCCATGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TFAAITALLHSLQSIRDGSSDLF*TSPMGT Trigger: TGTCCCCATGGGAGAAGTGCAGAAGAGATCACTGGA...GCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGCGGCAAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGTCTGGGCTGTCCATCTaGAGTCAGTTCATACCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWSGLSI*SQFIPL Trigger: CAGTGGTATGAACTGACTGCAGATGGACAGCCCAGA...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AGAACCTACAGAAAGTGTTTGATGCCCACGTGTGCTGTGACACGTGACATCCTAGTGAAGGTTCTGAGGTaGATGCTCTTCTCCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RTYRKCLMPTCAVTRDILVKVLR*MLFSRI Trigger: GATCCGGGAGAAGAGCATCCACCTCAGAACCTTCAC...TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | CAGAGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCGGTCAGCTCCACTGCTaGTGCATGGTGTTAAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSEHYCVIKAGQPQPPKFGQLHC*CMVLSF Trigger: GAAACTTAACACCATGCACCAGCAGTGGAGCTGACC...GAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGGAGTGGCCATGCGAATaGGAAGGCAGGGCGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMEWPCE*EGRAAH Trigger: ATGAGCCGCCCTGCCTTCCCATTCGCATGGCCACTC...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | GGATTATTGTCTGAATGGGTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGAGGAAGTTGTCCTTCTaGGCCAGCTTCTTGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSEWVAYPRNRTEVYLRKLSF*ASFLAS Trigger: GGAGGCCAAGAAGCTGGCCCAGAAGGACAACTTCCT...CAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCCATTCAGACAATAATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CCA 90 bp | AGAACCTACAGAAAGTGTTTGATGCCCACGTGTGCTGTGACACGTGACATCCTAACAGGGTCCTTGCTGTaGGGACAAGTCTTACTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RTYRKCLMPTCAVTRDILTGSLL*GQVLLV Trigger: TACAAGTAAGACTTGTCCCCACAGCAAGGACCCTGT...TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR GCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGCTGCTCCGGCAATGCTaGAAGCCAATGCTCACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMLLRQC*KPMLTL Trigger: CAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAG...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS-3UTR GCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGGGCAGATCTGCAGGCTaGCCAGGAAGTCATCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMGRSAG*PGSHPC Trigger: ACAAGGATGACTTCCTGGGCAGCCTGCAGATCTGCC...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR TCA 90 bp | CAAGTTCTGGGACCAGGCCCAGGCAGAACATTGCCATTTTTGTTGAGACTCAGTTGCTGGCCTTATTTTTaGCAAACCTGGAGAGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVLGPGPGRTLPFLLRLSCWPYF*QTWRVF Trigger: AAAAACTCTCCAGGTTTGTCAAAAATAAGGCCAGCA...ACTGAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCCTGGTCCCAGAACTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGTCTTGGAGGCTCCTTTaGTGTAAGAGGCAGGGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMSWRLL*CKRQGS Trigger: CGAACCCTGCCTCTTACATCAAAGGAGCCTCCAAGA...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| 3UTR CAA 72 bp | GCCATTTTTGTTGAGACTCAGTCATACATTGTAGTGTaGTCTGGCCTGAACTCACAGAGACTACCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AIFVETQSYIVV*SGLNSQRLPAS Trigger: TGAGGCAGGTAGTCTCTGTGAGTTCAGGCCAGACAACACTACAATGTATGACTGAGTCTCAACAAAAATGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS-3UTR TCA 90 bp | GTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGGTCTTACAAACTGAAATGGGATCTTGTTCTCCATaGTCATGCTTAGGTAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VAYPRNRTEVYLVLQTEMGSCSP*SCLGRA Trigger: GGCCCTACCTAAGCATGATCATGGAGAACAAGATCC...CATTTCAGTTTGTAAGACCAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS-3UTR TCA 90 bp | GGATTATTGTCTGAATGGGTGGCTTACCCTAGAAACAGAACAGAAGTCTATCTGCAGTTCATACCACTGTaGGAAGCCCTTAATCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSEWVAYPRNRTEVYLQFIPL*EALNQI Trigger: GATCTGATTAAGGGCTTCTCACAGTGGTATGAACTG...CAGATAGACTTCTGTTCTGTTTCTAGGGTAAGCCACCCATTCAGACAATAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS GCA 90 bp | GGCAAATGCTGGCCCCGCAGCTCACGGCTGATGAACTCGCGCTCGTaGTCCAGGAATTCGAAGGCGGCCTCCAAGCGCCCCAGCTTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GKCWPRSSRLMNSRS*SRNSKAASKRPSFP Trigger: CGGGAAGCTGGGGCGCTTGGAGGCCGCCTTCGAATTCCTGGAGCACGAGCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 90 bp | AGCCCTCTGGCACTGTCCTTGCCTTTGGGCTCCGGGCCTGGCCCCTaGGGCTCAGGCATAGGTTCAGGGTCTGTGGTGGCTGCGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: SPLALSLPLGSGPGP*GSGIGSGSVVAALI Trigger: TATCAGCGCAGCCACCACAGACCCTGAACCTATGCCTGAGCCCCAGGGGCCAGGCCCGGAGCCCAAAGGCAAGGACAGTGCCAGAGGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 90 bp | CAGTGGAGAGGCCACTATCATTCTCCGTCAGCGCTTCCTGGTCAGTaGGTAGTGAGAGCCACTCCAGCCGCAGGTGCAGCCGCCCACTGG | + |
|
Preference number: 5 (lower is better) Translates to: QWRGHYHSPSALPGQ*VVRATPAAGAAAHW Trigger: CCAGTGGGCGGCTGCACCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCAGGAAGCGCTGACGGAGAATGATAGTGGCCTCTCCACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS TCA 90 bp | GAGTGGCCATGCGAATGGGAAGGCAGGGCGGCTCATGGGTCTGGGTaGCTTGATGGGCCCTGGAGAGTGGAGACCTGGGACAGTCAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EWPCEWEGRAAHGSG*LDGPWRVETWDSQE Trigger: TTCCTGACTGTCCCAGGTCTCCACTCTCCAGGGCCCATCAAGTCACCCAGACCCATGAGCCGCCCTGCCTTCCCATTCGCATGGCCACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | CACTCCACACGCTCCACATCTGGGAAATGTATCCAGGCTGGCAAATaGTGGCCCCGCAGCTCACGGCTGATGAACTCGCGCTCGTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSTRSTSGKCIQAGK*WPRSSRLMNSRSCS Trigger: GGAGCACGAGCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTCCCAGATGTGGAGCGTGTGGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | AGCGCTTCCTGGTCAGTGAGTAGTGAGAGCCACTCCAGCCGCAGGTaGAGCCGCCCACTGGTCGTGTCATTCAGGGCAAACCACTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: SASWSVSSESHSSRR*SRPLVVSFRANHSS Trigger: GGATGAGTGGTTTGCCCTGAATGACACGACCAGTGGGCGGCTGCACCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCAGGAAGCGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CCA 90 bp | TCCACACGCTCCACATCTGGGAAATGTATCCAGGCTGGCAAATGCTaGCCCCGCAGCTCACGGCTGATGAACTCGCGCTCGTGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STRSTSGKCIQAGKC*PRSSRLMNSRSCSR Trigger: CCTGGAGCACGAGCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTCCCAGATGTGGAGCGTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 90 bp | AGGATGGCAGTGGAGAGGCCACTATCATTCTCCGTCAGCGCTTCCTaGTCAGTGAGTAGTGAGAGCCACTCCAGCCGCAGGTGCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RMAVERPLSFSVSAS*SVSSESHSSRRCSR Trigger: GCGGCTGCACCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCAGGAAGCGCTGACGGAGAATGATAGTGGCCTCTCCACTGCCATCCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS-3UTR CAA 90 bp | ATTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGGCACTGTCCTTGCCTTaGGGCTCCGGGCCTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IGKDGTVSGLFCVLRMLRALSLP*GSGPGP Trigger: GGGGCCAGGCCCGGAGCCCAAAGGCAAGGACAGTGC...CCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 90 bp | ACTGGACGCCGCTCACACCGCCCCGGATCTTCTGAAGTTCCACGCTaGTCTCACAGTCCCCGATGTAGCAGATCTGCAGGTCCAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TGRRSHRPGSSEVPR*SHSPRCSRSAGPGS Trigger: TGACCCTGGACCTGCAGATCTGCTACATCGGGGACTGTGAGATCAGCGTGGAACTTCAGAAGATCCGGGGCGGTGTGAGCGGCGTCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 90 bp | AACCGAAGCACCAGCCTCATGGAGATGAGGCTGTCCAGGCCTGAGTaGTCCAGCTGGAAGCACTGTTCGAGGGTGAGGTCAGCACAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NRSTSLMEMRLSRPE*SSWKHCSRVRSAQG Trigger: CCCCTGTGCTGACCTCACCCTCGAACAGTGCTTCCAGCTGGATCACTCAGGCCTGGACAGCCTCATCTCCATGAGGCTGGTGCTTCGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 90 bp | CTCGTCCCTCCACACGTAGGAACCGAAGCACCAGCCTCATGGAGATaGGGCTGTCCAGGCCTGAGTGATCCAGCTGGAAGCACTGTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: LVPPHVGTEAPASWR*GCPGLSDPAGSTVR Trigger: TCGAACAGTGCTTCCAGCTGGATCACTCAGGCCTGGACAGCCTCATCTCCATGAGGCTGGTGCTTCGGTTCCTACGTGTGGAGGGACGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | GGCAATGCTGCAAGCCAATGCTCACCTTGGCGTAGGGGTCTGACTTaGCTCCGAGCCCTAGGAAGTTGTCCTTCTGGGCCAGCTTCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GNAASQCSPWRRGLT*LRALGSCPSGPASW Trigger: CCAAGAAGCTGGCCCAGAAGGACAACTTCCTAGGGCTCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 90 bp | GCAAATGGACTCGGATCACACCACAGGGGAGAGGGACGCGCAGGTTaGTTACATCGAGCCCCTTCTTCACAGGCACAGTCACACGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANGLGSHHRGEGRAG*LHRAPSSQAQSHGW Trigger: CCAACCGTGTGACTGTGCCTGTGAAGAAGGGGCTCGATGTAACCAACCTGCGCGTCCCTCTCCCCTGTGGTGTGATCCGAGTCCATTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AGAAGTTCCTCTGTAGACCAGGCTGGCCTCGGACTCAGAGATCCACCTGCCTACCCGAGCCCTAGGAAGTaGTCCTTCTGGGCCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RSSSVDQAGLGLRDPPAYPSPRK*SFWASF Trigger: GAAGCTGGCCCAGAAGGACAACTTCCTAGGGCTCGG...GTAGGCAGGTGGATCTCTGAGTCCGAGGCCAGCCTGGTCTACAGAGGAACTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | TCAGGTTCTTGTAGATGGTTCTGCTCCGGCAATGCTGCAAGCCAATaGTCACCTTGGCGTAGGGGTCTGACTTGCCTCCGAGCCCTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSCRWFCSGNAASQ*SPWRRGLTCLRALG Trigger: TCCTAGGGCTCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAGAACCATCTACAAGAACCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | GCCTGGCCCCTGGGGCTCAGGCATAGGTTCAGGGTCTGTGGTGGCTaGGCTGATATTGTCAATGCTCTTGGAGGCTCCTTTGATGTAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AWPLGLRHRFRVCGG*ADIVNALGGSFDVR Trigger: TCTTACATCAAAGGAGCCTCCAAGAGCATTGACAATATCAGCGCAGCCACCACAGACCCTGAACCTATGCCTGAGCCCCAGGGGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 90 bp | TGTAGATGGTTCTGCTCCGGCAATGCTGCAAGCCAATGCTCACCTTaGCGTAGGGGTCTGACTTGCCTCCGAGCCCTAGGAAGTTGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRWFCSGNAASQCSP*RRGLTCLRALGSCP Trigger: AGGACAACTTCCTAGGGCTCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAGAACCATCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AACTGCCCAGGAGTTACTCTAAACAGGCTCCCTCCCCCACATCCCCGTGCTGGGTTGGTGGCCACCTTCTaGATGAACAGAGGACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: NCPGVTLNRLPPPHPRAGLVATF*MNRGPF Trigger: GAAAGGTCCTCTGTTCATCAAGAAGGTGGCCACCAA...CCCAGCACGGGGATGTGGGGGAGGGAGCCTGTTTAGAGTAACTCCTGGGCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | GGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGAATATGGGTCTGGGTGACTaGATGGGCCCTGGAGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GKDGTVSGLFCVLRMLRNMGLGD*MGPGEW Trigger: CCACTCTCCAGGGCCCATCAAGTCACCCAGACCCAT...ATTCCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCACTCTTCTCCCGGATCTaGGGCTCCAGCTTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CHIPEVCPLGFPRACNSSLFSRI*GSSFSR Trigger: CCGGGAGAAGCTGGAGCCCAAGATCCGGGAGAAGAG...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | TGCCACATACCAGAGGTTTGTCCCCTAGGCTTTCCCAGAGCATGTAACTCTTCAGCTCCTATGAAGGGCTaGTCCACCAGCAGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CHIPEVCPLGFPRACNSSAPMKG*STSRGS Trigger: GGAGCCCCTGCTGGTGGACAAGCCCTTCATAGGAGC...TGAAGAGTTACATGCTCTGGGAAAGCCTAGGGGACAAACCTCTGGTATGTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | ATTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGTTCTGGGCCAGCTTCTaGGCCTCCAGCAAATGGACT | + |
|
Preference number: 5 (lower is better) Translates to: IGKDGTVSGLFCVLRMLRFWASF*ASSKWT Trigger: AGTCCATTTGCTGGAGGCCAAGAAGCTGGCCCAGAA...CCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AGACCTTGGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAATAATGCCACATACGGCACAGTCACACGGTaGGGCAGCACCAGGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RPWFGAGLKISYGNNATYGTVTR*GSTRWA Trigger: TGCCCACCTGGTGCTGCCCAACCGTGTGACTGTGCC...GTATGTGGCATTATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | CAAATACTTCATTCCAGGTGGGGTTCAGGTTCTTGTAGATGGTTCTaGTCCGGCAATGCTGCAAGCCAATGCTCACCTTGGCGTAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QILHSRWGSGSCRWF*SGNAASQCSPWRRG Trigger: ACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAGAACCATCTACAAGAACCTGAACCCCACCTGGAATGAAGTATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS-3UTR CAA 90 bp | ATTGGAAAGGACGGCACAGTATCTGGACTGTTCTGTGTCCTCAGGATGCTGCGGTGTATGATGATCTTATaGGCCCACTCCACACGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGKDGTVSGLFCVLRMLRCMMIL*AHSTRS Trigger: GGAGCGTGTGGAGTGGGCCAATAAGATCATCATACA...CCGCAGCATCCTGAGGACACAGAACAGTCCAGATACTGTGCCGTCCTTTCCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | ACATTTGCCGCCATAACCGCTCTGTTGCATTCTTTACAGAGCATCAGGGATGGCCTCCACACAGGGTCCTaGCTGTGGGGACAAGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: TFAAITALLHSLQSIRDGLHTGS*LWGQVL Trigger: TAAGACTTGTCCCCACAGCAAGGACCCTGTGTGGAG...GCCATCCCTGATGCTCTGTAAAGAATGCAACAGAGCGGTTATGGCGGCAAATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 90 bp | GTCACATCTGCAAGGCCTTCGTTTAGGGGTGGGGCTTTACAACCCTaGTTGGTGGCCACCTTCTTGATGAACAGAGGACCTTTCTTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VTSARPSFRGGALQP*LVATFLMNRGPFFR Trigger: TCTAAAGAAAGGTCCTCTGTTCATCAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCCACCCCTAAACGAAGGCCTTGCAGATGTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AGTGAACACTATTGTGTTATTAAGGCAGGCCAGCCTCAGCCTCCCAAGTTCTGGCTGCAGGTGCGGCTTTaGAAGGAAGAACACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: SEHYCVIKAGQPQPPKFWLQVRL*KEEHCH Trigger: GTGACAGTGTTCTTCCTTCAAAAGCCGCACCTGCAG...CCAGAACTTGGGAGGCTGAGGCTGGCCTGCCTTAATAACACAATAGTGTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AGAACCTACAGAAAGTGTTTGATGCCCACGTGTGCTGTGACACGTGACATCCTAGGCATGTCCAGCAGGTaGGTCAAGCCTGTCCAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RTYRKCLMPTCAVTRDILGMSSR*VKPVQL Trigger: TAACTGGACAGGCTTGACCAACCTGCTGGACATGCC...TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 90 bp | AGTCTTACTTGTAAAGGTCTTCTTGCCTACAGTGAGCTTGACGTATaGAGAAGGGTCTCTGCTGGCCTTATTCGGCAGGTTGCAGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: SLTCKGLLAYSELDV*RRVSAGLIRQVAGI Trigger: AATGCCTGCAACCTGCCGAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187520.2 |
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| CDS-3UTR CAA 90 bp | AGAACCTACAGAAAGTGTTTGATGCCCACGTGTGCTGTGACACGTGACATCCTAAGCTTCTCCCGGATCTaGTTCTCCATGATCATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTYRKCLMPTCAVTRDILSFSRI*FSMIML Trigger: AAGCATGATCATGGAGAACAAGATCCGGGAGAAGCT...TAGGATGTCACGTGTCACAGCACACGTGGGCATCAAACACTTTCTGTAGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | CAAGTTCTGGGACCAGGCCCAGGCAGAACATTGCCATTTTTGTTGAGACTCAGTAACCTGGAGAGTTTTTaGGCTCGATATTCACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: QVLGPGPGRTLPFLLRLSNLESF*ARYSPF Trigger: GAATGGTGAATATCGAGCCAAAAAACTCTCCAGGTT...ACTGAGTCTCAACAAAAATGGCAATGTTCTGCCTGGGCCTGGTCCCAGAACTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AGACCTTGGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAATAATGCCACATACTTGCCTACAGTGAGCTaGACGTATGAAGAAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: RPWFGAGLKISYGNNATYLPTVS*TYEEGS Trigger: AGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAA...GTATGTGGCATTATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 90 bp | AGTCTTACTTGTAAAGGTCTTCTTGCCTACAGTGAGCTTGACGTATaGAGAAGGGTCTCTGCTGGCCTTATTTTTGACAAACCTGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLTCKGLLAYSELDV*RRVSAGLIFDKPGE Trigger: CTCTCCAGGTTTGTCAAAAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 90 bp | TCTGCAGTCAGTTCATACCACTGTGAGAAGCCCTTAATCAGATCTTaGTTTGATAAGTCAATCAGCACTTTCCCCAACTCCTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAVSSYHCEKPLIRS*FDKSISTFPNSFLL Trigger: CAGAAGGAAGGAGTTGGGGAAAGTGCTGATTGACTTATCAAAGCAAGATCTGATTAAGGGCTTCTCACAGTGGTATGAACTGACTGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS-3UTR CAA 90 bp | AGACCTTGGTTTGGGGCTGGGCTCAAAATTTCCTATGGAAATAATGCCACATACCTGCTGGCCTTATTTTaGACAAACCTGGAGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPWFGAGLKISYGNNATYLLALF*TNLESF Trigger: AAAACTCTCCAGGTTTGTCAAAAATAAGGCCAGCAG...GTATGTGGCATTATTTCCATAGGAAATTTTGAGCCCAGCCCCAAACCAAGGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | TGGCCCCGCAGCTCACGGCTGATGAACTCGCGCTCGTaGTCCAGGAATTCGAAGGCGGCCTCCAAGCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: WPRSSRLMNSRS*SRNSKAASKRP Trigger: GGGGCGCTTGGAGGCCGCCTTCGAATTCCTGGAGCACGAGCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 72 bp | GTGAGAGCCACTCCAGCCGCAGGTGCAGCCGCCCACTaGTCGTGTCATTCAGGGCAAACCACTCATCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: VRATPAAGAAAH*SCHSGQTTHPP Trigger: TGGTGGATGAGTGGTTTGCCCTGAATGACACGACCAGTGGGCGGCTGCACCTGCGGCTGGAGTGGCTCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS TCA 72 bp | GGCCACTATCATTCTCCGTCAGCGCTTCCTGGTCAGTaGGTAGTGAGAGCCACTCCAGCCGCAGGTGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GHYHSPSALPGQ*VVRATPAAGAA Trigger: GGCTGCACCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCAGGAAGCGCTGACGGAGAATGATAGTGGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS GCA 72 bp | CGCTCCACATCTGGGAAATGTATCCAGGCTGGCAAATaGTGGCCCCGCAGCTCACGGCTGATGAACTCGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSTSGKCIQAGK*WPRSSRLMNSR Trigger: GCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTCCCAGATGTGGAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS GCA 72 bp | TGGTCAGTGAGTAGTGAGAGCCACTCCAGCCGCAGGTaGAGCCGCCCACTGGTCGTGTCATTCAGGGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: WSVSSESHSSRR*SRPLVVSFRAN Trigger: GTTTGCCCTGAATGACACGACCAGTGGGCGGCTGCACCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 72 bp | ACATCGAGCCCCTTCTTCACAGGCACAGTCACACGGTaGGGCAGCACCAGGTGGGCAGCAATGAGGTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TSSPFFTGTVTR*GSTRWAAMRSS Trigger: GGAGGACCTCATTGCTGCCCACCTGGTGCTGCCCAACCGTGTGACTGTGCCTGTGAAGAAGGGGCTCGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS CAA 90 bp | AGGTTGGTTACATCGAGCCCCTTCTTCACAGGCACAGTCACACGGTaGGGCAGCACCAGGTGGGCAGCAATGAGGTCCTCCAGCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLVTSSPFFTGTVTR*GSTRWAAMRSSSRL Trigger: CAGCCTGCTGGAGGACCTCATTGCTGCCCACCTGGTGCTGCCCAACCGTGTGACTGTGCCTGTGAAGAAGGGGCTCGATGTAACCAACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS CAA 90 bp | GACTTGCCTCCGAGCCCTAGGAAGTTGTCCTTCTGGGCCAGCTTCTaGGCCTCCAGCAAATGGACTCGGATCACACCACAGGGGAGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DLPPSPRKLSFWASF*ASSKWTRITPQGRG Trigger: CCCTCTCCCCTGTGGTGTGATCCGAGTCCATTTGCTGGAGGCCAAGAAGCTGGCCCAGAAGGACAACTTCCTAGGGCTCGGAGGCAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS GCA 72 bp | GCAAGCCAATGCTCACCTTGGCGTAGGGGTCTGACTTaGCTCCGAGCCCTAGGAAGTTGTCCTTCTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ASQCSPWRRGLT*LRALGSCPSGP Trigger: TGGCCCAGAAGGACAACTTCCTAGGGCTCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS CCA 72 bp | TCCACATCTGGGAAATGTATCCAGGCTGGCAAATGCTaGCCCCGCAGCTCACGGCTGATGAACTCGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: STSGKCIQAGKC*PRSSRLMNSRS Trigger: CGAGCGCGAGTTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTCCCAGATGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
||
| CDS CCA 72 bp | CTCGGATCACACCACAGGGGAGAGGGACGCGCAGGTTaGTTACATCGAGCCCCTTCTTCACAGGCACAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSHHRGEGRAG*LHRAPSSQAQS Trigger: TGACTGTGCCTGTGAAGAAGGGGCTCGATGTAACCAACCTGCGCGTCCCTCTCCCCTGTGGTGTGATCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 72 bp | TTCTGCTCCGGCAATGCTGCAAGCCAATGCTCACCTTaGCGTAGGGGTCTGACTTGCCTCCGAGCCCTAGGA | + |
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Preference number: 6 (lower is better) Translates to: FCSGNAASQCSP*RRGLTCLRALG Trigger: TCCTAGGGCTCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 72 bp | GTGGAGAGGCCACTATCATTCTCCGTCAGCGCTTCCTaGTCAGTGAGTAGTGAGAGCCACTCCAGCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VERPLSFSVSAS*SVSSESHSSRR Trigger: CCTGCGGCTGGAGTGGCTCTCACTACTCACTGACCAGGAAGCGCTGACGGAGAATGATAGTGGCCTCTCCAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 72 bp | ACTCGGATCACACCACAGGGGAGAGGGACGCGCAGGTaGGTTACATCGAGCCCCTTCTTCACAGGCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: TRITPQGRGTRR*VTSSPFFTGTV Trigger: GACTGTGCCTGTGAAGAAGGGGCTCGATGTAACCAACCTGCGCGTCCCTCTCCCCTGTGGTGTGATCCGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CAA 90 bp | AGCAAATGGACTCGGATCACACCACAGGGGAGAGGGACGCGCAGGTaGGTTACATCGAGCCCCTTCTTCACAGGCACAGTCACACGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SKWTRITPQGRGTRR*VTSSPFFTGTVTRL Trigger: CAACCGTGTGACTGTGCCTGTGAAGAAGGGGCTCGATGTAACCAACCTGCGCGTCCCTCTCCCCTGTGGTGTGATCCGAGTCCATTTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 72 bp | ACCAGCCTCATGGAGATGAGGCTGTCCAGGCCTGAGTaGTCCAGCTGGAAGCACTGTTCGAGGGTGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: TSLMEMRLSRPE*SSWKHCSRVRS Trigger: TGACCTCACCCTCGAACAGTGCTTCCAGCTGGATCACTCAGGCCTGGACAGCCTCATCTCCATGAGGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 72 bp | AAGCACCAGCCTCATGGAGATGAGGCTGTCCAGGCCTaGGTGATCCAGCTGGAAGCACTGTTCGAGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: KHQPHGDEAVQA*VIQLEALFEGE Trigger: CTCACCCTCGAACAGTGCTTCCAGCTGGATCACTCAGGCCTGGACAGCCTCATCTCCATGAGGCTGGTGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | CACTCTAGCTCATCGTCCAGCACCTTCAGGCAGAGCTaGTCGGCTGCCACGCTGTGCACAAAGAAGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: HSSSSSSTFRQS*SAATLCTKKEN Trigger: GTTCTCCTTCTTTGTGCACAGCGTGGCAGCCGAGCAGCTCTGCCTGAAGGTGCTGGACGATGAGCTAGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CCA 72 bp | CTCCACACGCTCCACATCTGGGAAATGTATCCAGGCTaGCAAATGCTGGCCCCGCAGCTCACGGCTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: LHTLHIWEMYPG*QMLAPQLTADE Trigger: TTCATCAGCCGTGAGCTGCGGGGCCAGCATTTGCCAGCCTGGATACATTTCCCAGATGTGGAGCGTGTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CAA 72 bp | CCCAGCCGTCCCTGCCTGGAATCCCCAGCTTCAGTGTaGAGGCTGACATCTGTCAGGTCAAAGCAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PSRPCLESPASV*RLTSVRSKQEE Trigger: CTCTTCCTGCTTTGACCTGACAGATGTCAGCCTCAACACTGAAGCTGGGGATTCCAGGCAGGGACGGCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | TGTAGATGGTTCTGCTCCGGCAATGCTGCAAGCCAATaGTCACCTTGGCGTAGGGGTCTGACTTGCCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: CRWFCSGNAASQ*SPWRRGLTCLR Trigger: TCGGAGGCAAGTCAGACCCCTACGCCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAGAACCATCTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 72 bp | ATCTGCAGGTCCAGGGTCACTTTCCTCCGGTTGCGTTaGTCCGTGTGTACCTTGACGCCGTTCACCTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: ICRSRVTFLRLR*SVCTLTPFTLG Trigger: TCCCAAGGTGAACGGCGTCAAGGTACACACGGACAAACGCAACCGGAGGAAAGTGACCCTGGACCTGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | CTGGGGCTCAGGCATAGGTTCAGGGTCTGTGGTGGCTaGGCTGATATTGTCAATGCTCTTGGAGGCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGLRHRFRVCGG*ADIVNALGGSF Trigger: AAAGGAGCCTCCAAGAGCATTGACAATATCAGCGCAGCCACCACAGACCCTGAACCTATGCCTGAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 72 bp | GCAAGGCCTTCGTTTAGGGGTGGGGCTTTACAACCCTaGTTGGTGGCCACCTTCTTGATGAACAGAGGACCT | + |
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Preference number: 6 (lower is better) Translates to: ARPSFRGGALQP*LVATFLMNRGP Trigger: AGGTCCTCTGTTCATCAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCCACCCCTAAACGAAGGCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | CATTCCAGGTGGGGTTCAGGTTCTTGTAGATGGTTCTaGTCCGGCAATGCTGCAAGCCAATGCTCACCTTGG | + |
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Preference number: 6 (lower is better) Translates to: HSRWGSGSCRWF*SGNAASQCSPW Trigger: CCAAGGTGAGCATTGGCTTGCAGCATTGCCGGAGCAGAACCATCTACAAGAACCTGAACCCCACCTGGAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CCA 72 bp | TGCAGGCATTCTCTAAGAAGACCACGAGGATGGCAGTaGAGAGGCCACTATCATTCTCCGTCAGCGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CRHSLRRPRGWQ*RGHYHSPSALP Trigger: AGGAAGCGCTGACGGAGAATGATAGTGGCCTCTCCACTGCCATCCTCGTGGTCTTCTTAGAGAATGCCTGCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 72 bp | TCTGATAACTCATTGATCCCCGGCATGTCCAGCAGGTaGGTCAAGCCTGTCCAGTTAATCTGCAGGTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: SDNSLIPGMSSR*VKPVQLICRCG Trigger: GCCGCACCTGCAGATTAACTGGACAGGCTTGACCAACCTGCTGGACATGCCGGGGATCAATGAGTTATCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CAA 72 bp | GGTGGGGCTTTACAACCCTGGTTGGTGGCCACCTTCTaGATGAACAGAGGACCTTTCTTTAGAGCGTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: GGALQPWLVATF*MNRGPFFRASG Trigger: ACCCGACGCTCTAAAGAAAGGTCCTCTGTTCATCAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CAA 72 bp | AGGCCTTCGTTTAGGGGTGGGGCTTTACAACCCTGGTaGGTGGCCACCTTCTTGATGAACAGAGGACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPSFRGGALQPW*VATFLMNRGPF Trigger: GAAAGGTCCTCTGTTCATCAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCCACCCCTAAACGAAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CAA 72 bp | CCACTGCTGGTGCATGGTGTTAAGTTTCTGCAGCCGTaGACCAGCACTCTGAGACAGTGTCGGAGACACACA | + |
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Preference number: 6 (lower is better) Translates to: PLLVHGVKFLQP*TSTLRQCRRHT Trigger: TGTGTGTCTCCGACACTGTCTCAGAGTGCTGGTCAACGGCTGCAGAAACTTAACACCATGCACCAGCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | TCCCCAACTCCTTCCTTCTGTGTGAGCCGAGAGGCCTaGTGTTTTTCACTGCGACATCCAGTGATCTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SPTPSFCVSREA*CFSLRHPVISS Trigger: AGAAGAGATCACTGGATGTCGCAGTGAAAAACAGCAGGCCTCTCGGCTCACACAGAAGGAAGGAGTTGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | ATGAAGAAGGGTCTCTGCTGGCCTTATTCGGCAGGTTaGAGGCATTCTCTAAGAAGACCACGAGGATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: MKKGLCWPYSAG*RHSLRRPRGWQ Trigger: CTGCCATCCTCGTGGTCTTCTTAGAGAATGCCTGCAACCTGCCGAATAAGGCCAGCAGAGACCCTTCTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187520.2 |
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| CDS CAA 90 bp | TCGTTTAGGGGTGGGGCTTTACAACCCTGGTTGGTGGCCACCTTCTaGATGAACAGAGGACCTTTCTTTAGAGCGTCGGGTCCAGTGTAT | + |
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Preference number: 6 (lower is better) Translates to: SFRGGALQPWLVATF*MNRGPFFRASGPVY Trigger: ATACACTGGACCCGACGCTCTAAAGAAAGGTCCTCTGTTCATCAAGAAGGTGGCCACCAACCAGGGTTGTAAAGCCCCACCCCTAAACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 72 bp | GTCAAGCCTGTCCAGTTAATCTGCAGGTGCGGCTTTTaGAGGAAGAACACTGTCACAGCTCCTATGAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: VKPVQLICRCGF*RKNTVTAPMKG Trigger: GCCCTTCATAGGAGCTGTGACAGTGTTCTTCCTTCAAAAGCCGCACCTGCAGATTAACTGGACAGGCTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 72 bp | AAGGAGAACACCTGGCTCCACACAGGGTCCTTGCTGTaGGGACAAGTCTTACTTGTAAAGGTCTTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: KENTWLHTGSLL*GQVLLVKVFLP Trigger: AGGCAAGAAGACCTTTACAAGTAAGACTTGTCCCCACAGCAAGGACCCTGTGTGGAGCCAGGTGTTCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 72 bp | GGTCAAGCCTGTCCAGTTAATCTGCAGGTGCGGCTTTaGAAGGAAGAACACTGTCACAGCTCCTATGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GQACPVNLQVRL*KEEHCHSSYEG Trigger: CCCTTCATAGGAGCTGTGACAGTGTTCTTCCTTCAAAAGCCGCACCTGCAGATTAACTGGACAGGCTTGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CCA 72 bp | ATACTTCATTCCAGGTGGGGTTCAGGTTCTTGTAGATaGTTCTGCTCCGGCAATGCTGCAAGCCAATGCTCA | + |
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Preference number: 6 (lower is better) Translates to: ILHSRWGSGSCR*FCSGNAASQCS Trigger: TGAGCATTGGCTTGCAGCATTGCCGGAGCAGAACCATCTACAAGAACCTGAACCCCACCTGGAATGAAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 90 bp | TGGGGACAAGTCTTACTTGTAAAGGTCTTCTTGCCTACAGTGAGCTaGACGTATGAAGAAGGGTCTCTGCTGGCCTTATTCGGCAGGTTG | + |
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Preference number: 6 (lower is better) Translates to: WGQVLLVKVFLPTVS*TYEEGSLLALFGRL Trigger: CAACCTGCCGAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGACTTGTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187520.2 |
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| CDS TCA 72 bp | TGTAAAGGTCTTCTTGCCTACAGTGAGCTTGACGTATaGAGAAGGGTCTCTGCTGGCCTTATTCGGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: CKGLLAYSELDV*RRVSAGLIRQV Trigger: AACCTGCCGAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187520.2 |
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| CDS CAA 72 bp | TTGCTGTGGGGACAAGTCTTACTTGTAAAGGTCTTCTaGCCTACAGTGAGCTTGACGTATGAAGAAGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: LLWGQVLLVKVF*PTVSLTYEEGS Trigger: AGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGACTTGTCCCCACAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042158.13 ENSMUST00000187520.2 |
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| CDS CAA 72 bp | GTCTTACTTGTAAAGGTCTTCTTGCCTACAGTGAGCTaGACGTATGAAGAAGGGTCTCTGCTGGCCTTATTC | + |
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Preference number: 6 (lower is better) Translates to: VLLVKVFLPTVS*TYEEGSLLALF Trigger: GAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187520.2 |
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| CDS CAA 90 bp | TGGGGACAAGTCTTACTTGTAAAGGTCTTCTTGCCTACAGTGAGCTaGACGTATGAAGAAGGGTCTCTGCTGGCCTTATTTTTGACAAAC | + |
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Preference number: 6 (lower is better) Translates to: WGQVLLVKVFLPTVS*TYEEGSLLALFLTN Trigger: GTTTGTCAAAAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGACTTGTCCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS CAA 72 bp | GTCTTACTTGTAAAGGTCTTCTTGCCTACAGTGAGCTaGACGTATGAAGAAGGGTCTCTGCTGGCCTTATTT | + |
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Preference number: 6 (lower is better) Translates to: VLLVKVFLPTVS*TYEEGSLLALF Trigger: AAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACAAGTAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS TCA 72 bp | TGTAAAGGTCTTCTTGCCTACAGTGAGCTTGACGTATaGAGAAGGGTCTCTGCTGGCCTTATTTTTGACAAA | + |
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Preference number: 6 (lower is better) Translates to: CKGLLAYSELDV*RRVSAGLIFDK Trigger: TTTGTCAAAAATAAGGCCAGCAGAGACCCTTCTTCATACGTCAAGCTCACTGTAGGCAAGAAGACCTTTACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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| CDS GCA 72 bp | AGTTCATACCACTGTGAGAAGCCCTTAATCAGATCTTaGTTTGATAAGTCAATCAGCACTTTCCCCAACTCC | + |
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Preference number: 6 (lower is better) Translates to: SSYHCEKPLIRS*FDKSISTFPNS Trigger: GGAGTTGGGGAAAGTGCTGATTGACTTATCAAAGCAAGATCTGATTAAGGGCTTCTCACAGTGGTATGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042158.13 |
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