RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESYT2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021171

Ensembl transcript IDs: ENSMUST00000100986.4, ENSMUST00000220720.2, ENSMUST00000220804.2, ENSMUST00000220816.2

Found 383 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTGGAGGAGCTCCTaGCTAGGTCACGATGCCCGAGAGGGCTGGCCTCAGGGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: WLRCGLERPRGWRSS*LGHDAREGWPQGAG
Trigger: CCCAGCCCCCTGAGGCCAGCCCTCTCGGGCATCGTGACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 90 bp GGGTGGGTTCCTTGGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTaGAGGAGCTCCTGCCTAGGTCACGATGCCCGAGAGGGCTGGCCT +
Preference number: 1 (lower is better)
Translates to: GWVPWLRCGLERPRG*RSSCLGHDAREGWP
Trigger: AGGCCAGCCCTCTCGGGCATCGTGACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 90 bp GGGGCTGGGGCTTCTCCTCCATGGCAGGCTTATCATCGACTCCCATaGCTGGTGTTGACGGAGCAGTGTTGGCACCACCGGTGCCTGGCG +
Preference number: 1 (lower is better)
Translates to: GAGASPPWQAYHRLP*LVLTEQCWHHRCLA
Trigger: CGCCAGGCACCGGTGGTGCCAACACTGCTCCGTCAACACCAGTCATGGGAGTCGATGATAAGCCTGCCATGGAGGAGAAGCCCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 90 bp CTTCTCCTCCATGGCAGGCTTATCATCGACTCCCATGACTGGTGTTaGCGGAGCAGTGTTGGCACCACCGGTGCCTGGCGACGCAGACAT +
Preference number: 1 (lower is better)
Translates to: LLLHGRLIIDSHDWC*RSSVGTTGAWRRRH
Trigger: ATGTCTGCGTCGCCAGGCACCGGTGGTGCCAACACTGCTCCGTCAACACCAGTCATGGGAGTCGATGATAAGCCTGCCATGGAGGAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 90 bp CAATGGGCAGTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTTaGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTGGAGGAGCTCC +
Preference number: 1 (lower is better)
Translates to: QWAVICLRQCLGWVP*LRCGLERPRGWRSS
Trigger: GGAGCTCCTCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 90 bp GTCTCAGCTCCTGAGTGGCAATGGGCAGTGATATGTCTGAGGCAATaGTTGGGGTGGGTTCCTTGGCTGCGATGTGGCTTGGAGAGGCCA +
Preference number: 1 (lower is better)
Translates to: VSAPEWQWAVICLRQ*LGWVPWLRCGLERP
Trigger: TGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGGAGCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 90 bp CTGCAGGAGTGCACAACCACGATGAGCTTATTCCTTTGGGAGCTGTaGCGGATAGTCAGCTGGATCTGCCCCAGAGGAGATTGTCCCAGG +
Preference number: 1 (lower is better)
Translates to: LQECTTTMSLFLWEL*RIVSWICPRGDCPR
Trigger: CCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGTGCACTCCTGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 90 bp TGCACCTCCAGGATGCAGGACAAGGCAGAAACAAGTCCAGGTATCTaGTTTCCAGCAGGTGCAGCTGACAGAGCTCCACACAGCACAGGA +
Preference number: 1 (lower is better)
Translates to: CTSRMQDKAETSPGI*FPAGAADRAPHSTG
Trigger: TCCTGTGCTGTGTGGAGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTTGTCCTGCATCCTGGAGGTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 90 bp TCCCTGCACAAAGTGGGGCTGGGGGTGAGGGAGCTCTGCATTCACTaGCTCTCCAGCTTGCATAGTCTAACTGACAGGTGGAATGAACCT +
Preference number: 1 (lower is better)
Translates to: SLHKVGLGVRELCIH*LSSLHSLTDRWNEP
Trigger: AGGTTCATTCCACCTGTCAGTTAGACTATGCAAGCTGGAGAGCCAGTGAATGCAGAGCTCCCTCACCCCCAGCCCCACTTTGTGCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR TCA 90 bp CCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATaGGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGTGGACTTATG +
Preference number: 1 (lower is better)
Translates to: PYSSLLALRRIFCHV*GEAREGVCPVCGLM
Trigger: CATAAGTCCACACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR CCA 90 bp TTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGTaGACTTATGGCCAGGTTCTCCCATCAAGAGCAAGTGCAGTGCTC +
Preference number: 1 (lower is better)
Translates to: LSRMRGSSGRCLSCV*TYGQVLPSRASAVL
Trigger: GAGCACTGCACTTGCTCTTGATGGGAGAACCTGGCCATAAGTCCACACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR TCA 90 bp TATATTCAGCCTGCTACCAGGTTGCTGACTGGGCGCCCTGCGGATTaGTGCCATGTCTGGGGTTCAGTGTTGGGTCTCTGTTGTTGGTAT +
Preference number: 1 (lower is better)
Translates to: YIQPATRLLTGRPAD*CHVWGSVLGLCCWY
Trigger: ATACCAACAACAGAGACCCAACACTGAACCCCAGACATGGCATCAATCCGCAGGGCGCCCAGTCAGCAACCTGGTAGCAGGCTGAATATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 90 bp ACCACGATGAGCTTATTCCTTTGGGAGCTGTGCCGGATAGTCAGCTaGATCTGCCCCAGAGGAGATTGTCCCAGGGTTGTCCCATTTTCA +
Preference number: 1 (lower is better)
Translates to: TTMSLFLWELCRIVS*ICPRGDCPRVVPFS
Trigger: TGAAAATGGGACAACCCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 90 bp ATGAGGTTTCTGCAGGAGTGCACAACCACGATGAGCTTATTCCTTTaGGAGCTGTGCCGGATAGTCAGCTGGATCTGCCCCAGAGGAGAT +
Preference number: 1 (lower is better)
Translates to: MRFLQECTTTMSLFL*ELCRIVSWICPRGD
Trigger: ATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGTGCACTCCTGCAGAAACCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 90 bp CTATGCAGGAAGTGGTTTAATATATTCAGCCTGCTACCAGGTTGCTaGCTGGGCGCCCTGCGGATTGATGCCATGTCTGGGGTTCAGTGT +
Preference number: 1 (lower is better)
Translates to: LCRKWFNIFSLLPGC*LGALRIDAMSGVQC
Trigger: ACACTGAACCCCAGACATGGCATCAATCCGCAGGGCGCCCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 90 bp CTGGCCTTTAACACTTGGGTCTTCTTGGTGTGGCCTCCCATACCCTaGGATTACAGATGTGAGGTACAACGCCTAGCATGTGTGCATCTC +
Preference number: 1 (lower is better)
Translates to: LAFNTWVFLVWPPIP*DYRCEVQRLACVHL
Trigger: GAGATGCACACATGCTAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 90 bp CATTTTCAAGTTGACGTAGCCTTTGTCTCAGCTCCTGAGTGGCAATaGGCAGTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTTGG +
Preference number: 1 (lower is better)
Translates to: HFQVDVAFVSAPEWQ*AVICLRQCLGWVPW
Trigger: CCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGGAGCTGAGACAAAGGCTACGTCAACTTGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 90 bp TGCCATGTCTGGGGTTCAGTGTTGGGTCTCTGTTGTTGGTATCTCTaGCACTCAATAGCAGCTGTAGTCAGGTCAGAGTTGGTGAATGGC +
Preference number: 1 (lower is better)
Translates to: CHVWGSVLGLCCWYL*HSIAAVVRSELVNG
Trigger: GCCATTCACCAACTCTGACCTGACTACAGCTGCTATTGAGTGCCAGAGATACCAACAACAGAGACCCAACACTGAACCCCAGACATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 90 bp GCTCTGGAAGATTTGGTTGCCCACCCGGATAATTCCATAGGGGTCTaGTTTTCCCTTGACAAGGCCTTTAAGGTAGGTGTCTTTGCCCTG +
Preference number: 1 (lower is better)
Translates to: ALEDLVAHPDNSIGV*FSLDKAFKVGVFAL
Trigger: CAGGGCAAAGACACCTACCTTAAAGGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATTATCCGGGTGGGCAACCAAATCTTCCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
3UTR TCA 90 bp CGGAAGGTTCCTTGCAGAATCCAAATACAAGATCAGCAGTGCAGATaGAAGGCCATCACTGGCTTGGTCCTTGTCAGCTCTGATGTCTGC +
Preference number: 1 (lower is better)
Translates to: RKVPCRIQIQDQQCR*KAITGLVLVSSDVC
Trigger: GCAGACATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCTTTCATCTGCACTGCTGATCTTGTATTTGGATTCTGCAAGGAACCTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 90 bp GCAGCTGTAGTCAGGTCAGAGTTGGTGAATGGCAGTCCATATTGTTaGTCCAAGGCACATCCCTCATTTCTGTCACCAAGGCCACTTTGT +
Preference number: 1 (lower is better)
Translates to: AAVVRSELVNGSPYC*SKAHPSFLSPRPLC
Trigger: ACAAAGTGGCCTTGGTGACAGAAATGAGGGATGTGCCTTGGATCAACAATATGGACTGCCATTCACCAACTCTGACCTGACTACAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 90 bp TCCAAATACAAGATCAGCAGTGCAGATGAAAGGCCATCACTGGCTTaGTCCTTGTCAGCTCTGATGTCTGCCAGCACCTTGTCAAGGTTT +
Preference number: 1 (lower is better)
Translates to: SKYKISSADERPSLA*SLSALMSASTLSRF
Trigger: AAACCTTGACAAGGTGCTGGCAGACATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCTTTCATCTGCACTGCTGATCTTGTATTTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 90 bp CAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCAGCGAAACACTaGAGTCGAAGCTCTGATCAAACACAGGGTTCAATGTCTTCTTTG +
Preference number: 1 (lower is better)
Translates to: QPHPMFSFAPQAAKH*SRSSDQTQGSMSSL
Trigger: CAAAGAAGACATTGAACCCTGTGTTTGATCAGAGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 90 bp AGGTTTGCAGCATCAGGCATCAGTGTGAGCCACTCTAACTTCAAATaGAGCTTTCCTTTGGGAACCTCGTCCAGAGTGAACCATTCATCT +
Preference number: 1 (lower is better)
Translates to: RFAASGISVSHSNFK*SFPLGTSSRVNHSS
Trigger: AGATGAATGGTTCACTCTGGACGAGGTTCCCAAAGGAAAGCTGCATTTGAAGTTAGAGTGGCTCACACTGATGCCTGATGCTGCAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 90 bp CAGGATGGTAGGAAACTGGATTCCAGAACTGTGGGTTCACTGTTGTaGTTCCCTGACTGTGAAGTGAGTTCCTTGGTCAGAAGCAATTCT +
Preference number: 1 (lower is better)
Translates to: QDGRKLDSRTVGSLL*FPDCEVSSLVRSNS
Trigger: AGAATTGCTTCTGACCAAGGAACTCACTTCACAGTCAGGGAAGCACAACAGTGAACCCACAGTTCTGGAATCCAGTTTCCTACCATCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 90 bp AGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTTAGACTaGAGATGCTACTTGAAGACTCAGATGATGCACGTGGGGGCACTG +
Preference number: 1 (lower is better)
Translates to: SGLVLLDLLSPFHLD*RCYLKTQMMHVGAL
Trigger: CAGTGCCCCCACGTGCATCATCTGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 90 bp TCTCTGGCACTCAATAGCAGCTGTAGTCAGGTCAGAGTTGGTGAATaGCAGTCCATATTGTTGATCCAAGGCACATCCCTCATTTCTGTC +
Preference number: 1 (lower is better)
Translates to: SLALNSSCSQVRVGE*QSILLIQGTSLISV
Trigger: GACAGAAATGAGGGATGTGCCTTGGATCAACAATATGGACTGCCATTCACCAACTCTGACCTGACTACAGCTGCTATTGAGTGCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 90 bp TGCTCATCTTTAACCTCAACCTCAAGGTCCTGGCGCCTGGGGTTATaGATGAAGAAAGTGAAGTTTTCCTCCCATACAGGCTCACTAGTT +
Preference number: 1 (lower is better)
Translates to: CSSLTSTSRSWRLGL*MKKVKFSSHTGSLV
Trigger: AACTAGTGAGCCTGTATGGGAGGAAAACTTCACTTTCTTCATTCATAACCCCAGGCGCCAGGACCTTGAGGTTGAGGTTAAAGATGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 90 bp TCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCAGGTCACTaGACATGTTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAA +
Preference number: 1 (lower is better)
Translates to: SEAKIVRRKSELPGH*TCFGSWQKCSHLWK
Trigger: TTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 90 bp TACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTaGGCTTCCAGGTCACTGAACATGTTTTGGATCCTGGCAGAAATG +
Preference number: 1 (lower is better)
Translates to: YRLQGIRSQNSQKEV*ASRSLNMFWILAEM
Trigger: CATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR GCA 90 bp ACTGAGCCATCTCTCACAAGATGTAAAAAGCATAGAATAACAGACTaGCTTTATTGTGGACACACTGTGATGCACTGGTGGCACTGGGGC +
Preference number: 1 (lower is better)
Translates to: TEPSLTRCKKHRITD*LYCGHTVMHWWHWG
Trigger: GCCCCAGTGCCACCAGTGCATCACAGTGTGTCCACAATAAAGGCAGTCTGTTATTCTATGCTTTTTACATCTTGTGAGAGATGGCTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR CCA 90 bp TGGCAAGTCAGCCCTCCTCATGCAGCACTCAGAACTACAACTAAGTaGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTTAGACTG +
Preference number: 1 (lower is better)
Translates to: WQVSPPHAALRTTTK*TSITRPSVSFPLRL
Trigger: CAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGAGTGCTGCATGAGGAGGGCTGACTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 90 bp GGAGGAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTaGTATGTTTGGTCACATAAGCTTCCCATAGGTTTAATTCCAAGA +
Preference number: 1 (lower is better)
Translates to: GGECKRSTRYSSQAL*YVWSHKLPIGLIPR
Trigger: TCTTGGAATTAAACCTATGGGAAGCTTATGTGACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTCCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR TCA 90 bp GTAGTACATATGGTTGCAAGGCTGCTTCTGTTTTCACCTGAAACTTaGAAACACCTTTGTACTTTAAGGCACAGGATAAGCCACCACATG +
Preference number: 1 (lower is better)
Translates to: VVHMVARLLLFSPET*KHLCTLRHRISHHM
Trigger: CATGTGGTGGCTTATCCTGTGCCTTAAAGTACAAAGGTGTTTTCAAGTTTCAGGTGAAAACAGAAGCAGCCTTGCAACCATATGTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR GCA 90 bp CCTAAACACCTCTGCATAGGGACTGCCTGTACAAGAAATATAGAGTaGAAAATACAAATGGTAGTACATATGGTTGCAAGGCTGCTTCTG +
Preference number: 1 (lower is better)
Translates to: PKHLCIGTACTRNIE*KIQMVVHMVARLLL
Trigger: CAGAAGCAGCCTTGCAACCATATGTACTACCATTTGTATTTTGCACTCTATATTTCTTGTACAGGCAGTCCCTATGCAGAGGTGTTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR TCA 90 bp ACAAATGGTAGTACATATGGTTGCAAGGCTGCTTCTGTTTTCACCTaGAACTTGAAAACACCTTTGTACTTTAAGGCACAGGATAAGCCA +
Preference number: 1 (lower is better)
Translates to: TNGSTYGCKAASVFT*NLKTPLYFKAQDKP
Trigger: TGGCTTATCCTGTGCCTTAAAGTACAAAGGTGTTTTCAAGTTTCAGGTGAAAACAGAAGCAGCCTTGCAACCATATGTACTACCATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR TCA 90 bp ATGATGATTGTAACAATTTTCATAACTGTGATTTTGCTACTGGTATaGATCATGAGAATCATTCCAACTGAGCTATCTTCTCAGTCCTGG +
Preference number: 1 (lower is better)
Translates to: MMIVTIFITVILLLV*IMRIIPTELSSQSW
Trigger: CCAGGACTGAGAAGATAGCTCAGTTGGAATGATTCTCATGATTCATACCAGTAGCAAAATCACAGTTATGAAAATTGTTACAATCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp CAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGGATGCCCGAGAGGGCTaGCCTCAGGGGGCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: QDLLSRMRGSSGRCLSCVDAREG*PQGAGA
Trigger: AGCCCCAGCCCCCTGAGGCCAGCCCTCTCGGGCATC...CACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp GCAATGGGCAGTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTaGGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTGGAGGAGCTC +
Preference number: 2 (lower is better)
Translates to: AMGSDMSEAMLGVGS*AAMWLGEAKRLEEL
Trigger: GAGCTCCTCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp AGGCTGGCCTTTAACACTTGGGTCTTCTTGGTGTGGCCTCCCATACCCTGGGATTCCAGCAGGTGCAGCTaGCAGAGCTCCACACAGCAC +
Preference number: 2 (lower is better)
Translates to: RLAFNTWVFLVWPPIPWDSSRCS*QSSTQH
Trigger: GTGCTGTGTGGAGCTCTGTCAGCTGCACCTGCTGGA...ATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR TCA 90 bp CTGTGCCGGATAGTCAGCTGGATCTGCCCCAGAGGAGATTGTCCCAGGGTTGTCGGTCCTTGTCAGCTCTaGTGTCTGCCAGCACCTTGT +
Preference number: 2 (lower is better)
Translates to: LCRIVSWICPRGDCPRVVGPCQL*CLPAPC
Trigger: ACAAGGTGCTGGCAGACATCAGAGCTGACAAGGACC...GACAACCCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp TCAGCTCCTGAGTGGCAATGGGCAGTGATATGTCTGAGGCAATGCTaGGGGTGGGTTCCTTGGCTGCGATGTGGCTTGGAGAGGCCAAGA +
Preference number: 2 (lower is better)
Translates to: SAPEWQWAVICLRQC*GWVPWLRCGLERPR
Trigger: TCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGGAGCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR GCA 90 bp GCCACATCCAATGTTCTCCTTTGCACCTCAGGCAGCGAAACACTGAAGTCGAAGGGTGGGTTCCTTGGCTaGGATGTGGCTTGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: ATSNVLLCTSGSETLKSKGGFLG*DVAWRG
Trigger: GCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACC...CTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGATGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCAGAGAGGCCAAGAGGCTaGAGGAGCTCCTGCCTAGGT +
Preference number: 2 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQAERPRG*RSSCLG
Trigger: ACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTC...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp CAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGCCACTGGTGAAGCACTaGAGGAAGCTCAACAGGGAG +
Preference number: 2 (lower is better)
Translates to: QDLLSRMRGSSGRCLSCVPLVKH*RKLNRE
Trigger: CTCCCTGTTGAGCTTCCTCCAGTGCTTCACCAGTGG...CACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 90 bp AATGAGGTTTCTGCAGGAGTGCACAACCACGATGAGCTTATTCCTTaGGGAGCTGTGCCGGATAGTCAGCTGGATCTGCCCCAGAGGAGA +
Preference number: 2 (lower is better)
Translates to: NEVSAGVHNHDELIP*GAVPDSQLDLPQRR
Trigger: TCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGTGCACTCCTGCAGAAACCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp ATATATTCAGCCTGCTACCAGGTTGCTGACTGGGCGCCCTGCGGATaGATGCCATGTCTGGGGTTCAGTGTTGGGTCTCTGTTGTTGGTA +
Preference number: 2 (lower is better)
Translates to: IYSACYQVADWAPCG*MPCLGFSVGSLLLV
Trigger: TACCAACAACAGAGACCCAACACTGAACCCCAGACATGGCATCAATCCGCAGGGCGCCCAGTCAGCAACCTGGTAGCAGGCTGAATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR TCA 90 bp CAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGGATCAGCAGTGCAGATaGAAGGCCATCACTGGCTTG +
Preference number: 2 (lower is better)
Translates to: QDLLSRMRGSSGRCLSCVDQQCR*KAITGL
Trigger: CAAGCCAGTGATGGCCTTTCATCTGCACTGCTGATC...CACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp CCTTTGCACCTCAGGCAGCGAAACACTGAAGTCGAAGCTCTGATCAAACACAGGTGCCGGATAGTCAGCTaGATCTGCCCCAGAGGAGAT +
Preference number: 2 (lower is better)
Translates to: PLHLRQRNTEVEALIKHRCRIVS*ICPRGD
Trigger: ATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCA...CCTGTGTTTGATCAGAGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp CCCTGCGGATTGATGCCATGTCTGGGGTTCAGTGTTGGGTCTCTGTaGTTGGTATCTCTGGCACTCAATAGCAGCTGTAGTCAGGTCAGA +
Preference number: 2 (lower is better)
Translates to: PCGLMPCLGFSVGSL*LVSLALNSSCSQVR
Trigger: TCTGACCTGACTACAGCTGCTATTGAGTGCCAGAGATACCAACAACAGAGACCCAACACTGAACCCCAGACATGGCATCAATCCGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CCA 90 bp TCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATGACACTTGGGTCTTCTTaGTGTGGCCTCCCATACCCT +
Preference number: 2 (lower is better)
Translates to: SQALQQLAGTAQDLLSRMTLGSS*CGLPYP
Trigger: AGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGT...CATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR TCA 90 bp AGTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTTGGCTGCGATGTGGCTTAATTCCATAGGGGTCTaGTTTTCCCTTGACAAGGCC +
Preference number: 2 (lower is better)
Translates to: SDMSEAMLGVGSLAAMWLNSIGV*FSLDKA
Trigger: GGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATT...AAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTCTGCTACCAGGTTGCTaGCTGGGCGCCCTGCGGATT +
Preference number: 2 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGLLPGC*LGALRI
Trigger: AATCCGCAGGGCGCCCAGTCAGCAACCTGGTAGCAG...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CCA 90 bp TGCCTTTATTGTGGACACACTGTGATGCACTGGTGGCACTGGGGCAGAGATGGGTTGCTCTGGAAGATTTaGTTGCCCACCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: CLYCGHTVMHWWHWGRDGLLWKI*LPTRII
Trigger: AATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAA...CCCATCTCTGCCCCAGTGCCACCAGTGCATCACAGTGTGTCCACAATAAAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp CAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGGGGCTTCTCCTCCATaGCAGGCTTATCATCGACTC +
Preference number: 2 (lower is better)
Translates to: QNEDIQEISSLTAACWHCGASPP*QAYHRL
Trigger: GAGTCGATGATAAGCCTGCCATGGAGGAGAAGCCCC...GCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp CAGGAAGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTaGCACCTCAGGCAGCGAAACACTGAAGTCGAAGCTCTGATCAAA +
Preference number: 2 (lower is better)
Translates to: QEATTVLHSHIQCSP*HLRQRNTEVEALIK
Trigger: TTTGATCAGAGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp TTGTTGATCCAAGGCACATCCCTCATTTCTGTCACCAAGGCCACTTaGTCCATGGGCTTATTGGGCAAAGACAAGGATGGGTCCAGCGTA +
Preference number: 2 (lower is better)
Translates to: LLIQGTSLISVTKAT*SMGLLGKDKDGSSV
Trigger: TACGCTGGACCCATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGATGTGCCTTGGATCAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR TCA 90 bp TTTAGGACACTGGAGTGTGCCTTGATGGCAAGTCAGCCCTCCTCATGCAGCACTTGGCATGGCACAAAATaGGGATATCCAGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: FRTLECALMASQPSSCSTWHGTK*GYPGNL
Trigger: GAGATTTCCTGGATATCCTCATTTTGTGCCATGCCA...AGTGCTGCATGAGGAGGGCTGACTTGCCATCAAGGCACACTCCAGTGTCCTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR TCA 90 bp TGGAAGGAAGTAGTTTCAGACTTCCCTGCACAAAGTGGGGCTGGGGGTGAGGGATTGCATCAAGGAGAGTaGTTAGAAGGATGTTCCCAA +
Preference number: 2 (lower is better)
Translates to: WKEVVSDFPAQSGAGGEGLHQGE*LEGCSQ
Trigger: TTGGGAACATCCTTCTAATCACTCTCCTTGATGCAA...TCCCTCACCCCCAGCCCCACTTTGTGCAGGGAAGTCTGAAACTACTTCCTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR TCA 90 bp TTATTGTGGACACACTGTGATGCACTGGTGGCACTGGGGCAGAGATGGGTAAAGAAAACAAAACCCAGGTaGATGCAGGTACCCACAGAG +
Preference number: 2 (lower is better)
Translates to: LLWTHCDALVALGQRWVKKTKPR*MQVPTE
Trigger: CTCTGTGGGTACCTGCATTCACCTGGGTTTTGTTTT...CTTTACCCATCTCTGCCCCAGTGCCACCAGTGCATCACAGTGTGTCCACAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR TCA 90 bp AGTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTTGGCTGCGATGTGGCTTTGGCGCCTGGGGTTATaGATGAAGAAAGTGAAGTTT +
Preference number: 2 (lower is better)
Translates to: SDMSEAMLGVGSLAAMWLWRLGL*MKKVKF
Trigger: AAACTTCACTTTCTTCATTCATAACCCCAGGCGCCA...AAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp GCAGACTTCTTCAAGACACCGGGGTTAAAGTCTAATGGGTTACTCGGAAGGTTCAGGCCATCACTGGCTTaGTCCTTGTCAGCTCTGATG +
Preference number: 2 (lower is better)
Translates to: ADFFKTPGLKSNGLLGRFRPSLA*SLSALM
Trigger: CATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCT...GAACCTTCCGAGTAACCCATTAGACTTTAACCCCGGTGTCTTGAAGAAGTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp GAAGGTGTCTGTCCTGTGTGTGGACTTATGGCCAGGTTCTCCCATCAAGAGCAATTTTCCTCCCTTCTTTaGAGACAGAGGGCCGTTTCA +
Preference number: 2 (lower is better)
Translates to: EGVCPVCGLMARFSHQEQFSSLL*RQRAVS
Trigger: TGAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAAAA...TTGCTCTTGATGGGAGAACCTGGCCATAAGTCCACACACAGGACAGACACCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp TCAGGCATCAGTGTGAGCCACTCTAACTTCAAATGCAGCTTTCCTTaGGGAACCTCGTCCAGAGTGAACCATTCATCTAAAAGGCGCTCC +
Preference number: 2 (lower is better)
Translates to: SGISVSHSNFKCSFP*GTSSRVNHSSKRRS
Trigger: GGAGCGCCTTTTAGATGAATGGTTCACTCTGGACGAGGTTCCCAAAGGAAAGCTGCATTTGAAGTTAGAGTGGCTCACACTGATGCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp AGCAGCTGTAGTCAGGTCAGAGTTGGTGAATGGCAGTCCATATTGTaGATCCAAGGCACATCCCTCATTTCTGTCACCAAGGCCACTTTG +
Preference number: 2 (lower is better)
Translates to: SSCSQVRVGEWQSIL*IQGTSLISVTKATL
Trigger: CAAAGTGGCCTTGGTGACAGAAATGAGGGATGTGCCTTGGATCAACAATATGGACTGCCATTCACCAACTCTGACCTGACTACAGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR TCA 90 bp GAAGGTGTCTGTCCTGTGTGTGGACTTATGGCCAGGTTCTCCCATCAAGAGCAATGCCACGTGATACACTaGAAAATAGACCTACGTCCA +
Preference number: 2 (lower is better)
Translates to: EGVCPVCGLMARFSHQEQCHVIH*KIDLRP
Trigger: TGGACGTAGGTCTATTTTTCAGTGTATCACGTGGCA...TTGCTCTTGATGGGAGAACCTGGCCATAAGTCCACACACAGGACAGACACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCATGCCACGTGATACACTaGAAAATAGACCTACGTCCA +
Preference number: 2 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQACHVIH*KIDLRP
Trigger: TGGACGTAGGTCTATTTTTCAGTGTATCACGTGGCA...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp GAAGGTGTCTGTCCTGTGTGTGGACTTATGGCCAGGTTCTCCCATCAAGAGCAACAGATGAGTATACTGTaGTTCTCCAGAGCCTTGACA +
Preference number: 2 (lower is better)
Translates to: EGVCPVCGLMARFSHQEQQMSIL*FSRALT
Trigger: TGTCAAGGCTCTGGAGAATCACAGTATACTCATCTG...TTGCTCTTGATGGGAGAACCTGGCCATAAGTCCACACACAGGACAGACACCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR TCA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTACCTGGGGTGTGCTGTaGAGAGCCACAGACTGTGTT +
Preference number: 2 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGTWGVL*RATDCV
Trigger: AACACAGTCTGTGGCTCTTCACAGCACACCCCAGGT...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCACTGAAGTCGAAGCTCTaGTCAAACACAGGGTTCAAT +
Preference number: 2 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQALKSKL*SNTGFN
Trigger: ATTGAACCCTGTGTTTGATCAGAGCTTCGACTTCAG...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR GCA 90 bp CAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCAGTGCACCTCCAGGATaGAGGACAAGGCAGAAACAA +
Preference number: 2 (lower is better)
Translates to: QNEDIQEISSLTAACWHCSAPPG*RTRQKQ
Trigger: TTGTTTCTGCCTTGTCCTGCATCCTGGAGGTGCACT...GCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR GCA 90 bp GCAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTCACCCTTTGTTACTATaGATCCATCCCATTTCACCT +
Preference number: 2 (lower is better)
Translates to: AGSFVTYEGKLGKVSVLCHPLLL*IHPISP
Trigger: AGGTGAAATGGGATGGATGCATAGTAACAAAGGGTG...ACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp AGACTGCCTTTATTGTGGACACACTGTGATGCACTGGTGGCACTGGGGCAGAGATCCACATTGACAACCTaGAAGGAAGTAGTTTCAGAC +
Preference number: 2 (lower is better)
Translates to: RLPLLWTHCDALVALGQRSTLTT*KEVVSD
Trigger: GTCTGAAACTACTTCCTTCCAGGTTGTCAATGTGGA...TCTCTGCCCCAGTGCCACCAGTGCATCACAGTGTGTCCACAATAAAGGCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp AGCTTCCAGGTCACTGAACATGTTTTGGATCCTGGCAGAAATGCTCCCACCTCTTGGATTCCAGAACTGTaGGTTCACTGTTGTGCTTCC +
Preference number: 2 (lower is better)
Translates to: SFQVTEHVLDPGRNAPTSWIPEL*VHCCAS
Trigger: GGAAGCACAACAGTGAACCCACAGTTCTGGAATCCA...AGAGGTGGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 90 bp AATAGCAGCTGTAGTCAGGTCAGAGTTGGTGAATGGCAGTCCATATaGTTGATCCAAGGCACATCCCTCATTTCTGTCACCAAGGCCACT +
Preference number: 2 (lower is better)
Translates to: NSSCSQVRVGEWQSI*LIQGTSLISVTKAT
Trigger: AGTGGCCTTGGTGACAGAAATGAGGGATGTGCCTTGGATCAACAATATGGACTGCCATTCACCAACTCTGACCTGACTACAGCTGCTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 90 bp ACTGTGGGTTCACTGTTGTGCTTCCCTGACTGTGAAGTGAGTTCCTaGGTCAGAAGCAATTCTGTGTGCAATACCATGATGGTGGGTAAG +
Preference number: 2 (lower is better)
Translates to: TVGSLLCFPDCEVSS*VRSNSVCNTMMVGK
Trigger: CTTACCCACCATCATGGTATTGCACACAGAATTGCTTCTGACCAAGGAACTCACTTCACAGTCAGGGAAGCACAACAGTGAACCCACAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 90 bp CTTCAGGATGGTAGGAAACTGGATTCCAGAACTGTGGGTTCACTGTaGTGCTTCCCTGACTGTGAAGTGAGTTCCTTGGTCAGAAGCAAT +
Preference number: 2 (lower is better)
Translates to: LQDGRKLDSRTVGSL*CFPDCEVSSLVRSN
Trigger: ATTGCTTCTGACCAAGGAACTCACTTCACAGTCAGGGAAGCACAACAGTGAACCCACAGTTCTGGAATCCAGTTTCCTACCATCCTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR TCA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCATTCTTCAAAGCTCTCTaGACTGCAGACTTCTTCAAG +
Preference number: 2 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQAFFKAL*TADFFK
Trigger: CTTGAAGAAGTCTGCAGTTCAGAGAGCTTTGAAGAA...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR GCA 90 bp ACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGGCAGCTTGCTGGCACTaGGCAGGATCTTTTGTCACG +
Preference number: 2 (lower is better)
Translates to: TKWTSITRPSVSFPLRLEAACWH*AGSFVT
Trigger: CGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGC...CTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR GCA 90 bp GCAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTACTCGGAAGGTTCCTTaGAGAATCCAAATACAAGAT +
Preference number: 2 (lower is better)
Translates to: AGSFVTYEGKLGKVSVLCTRKVP*RIQIQD
Trigger: ATCTTGTATTTGGATTCTGCAAGGAACCTTCCGAGT...ACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR GCA 90 bp ACAACCACGATGAGCTTATTCCTTTGGGAGCTGTGCCGGATAGTCAGCTGGATCTCTTCATTTTTAAGGTaGTGTTTGGACCCGAGTTGC +
Preference number: 2 (lower is better)
Translates to: TTTMSLFLWELCRIVSWISSFLR*CLDPSC
Trigger: GCAACTCGGGTCCAAACAGCACCTTAAAAATGAAGA...GATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp ACTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGATGCTACTTGAAGACTCAAGGTGTAGCCCAGGCTaGCCTTTAACACTTGGGTCT +
Preference number: 2 (lower is better)
Translates to: TRPSVSFPLRLEMLLEDSRCSPG*PLTLGS
Trigger: AGACCCAAGTGTTAAAGGCCAGCCTGGGCTACACCT...TGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 90 bp TTACTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGATGCTACTaGAAGACTCAGATGATGCACGTGGGGGCACTGTATCTGAACTCA +
Preference number: 2 (lower is better)
Translates to: LLDLLSPFHLDWRCY*KTQMMHVGALYLNS
Trigger: TGAGTTCAGATACAGTGCCCCCACGTGCATCATCTGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 90 bp ACCCGGAGGGCAATCTTCATTTTTAAGGTGCTGTTTGGACCCGAGTaGCTAAGCTGGAACCGCTGGTTTATAGTCATGTTGTCACTTGTA +
Preference number: 2 (lower is better)
Translates to: TRRAIFIFKVLFGPE*LSWNRWFIVMLSLV
Trigger: TACAAGTGACAACATGACTATAAACCAGCGGTTCCAGCTTAGCAACTCGGGTCCAAACAGCACCTTAAAAATGAAGATTGCCCTCCGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 90 bp AGGAGAACCCTAGCAGTGTTCCAGACGGCTGCCACATACTCAACATaGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCT +
Preference number: 2 (lower is better)
Translates to: RRTLAVFQTAATYST*YCVFKRPFHLSIKA
Trigger: AGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACAATGTTGAGTATGTGGCAGCCGTCTGGAACACTGCTAGGGTTCTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CCA 90 bp TGCCTTTATTGTGGACACACTGTGATGCACTGGTGGCACTGGGGCAGAGATGGGCACTTCATTCCATTTTaGACTAAGGTTCTCTTTGAT +
Preference number: 2 (lower is better)
Translates to: CLYCGHTVMHWWHWGRDGHFIPF*TKVLFD
Trigger: ATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTG...CCCATCTCTGCCCCAGTGCCACCAGTGCATCACAGTGTGTCCACAATAAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp AGACTGCCTTTATTGTGGACACACTGTGATGCACTGGTGGCACTGGGGCAGAGAGAAATCATCCTTGTCTaGATCTTCATCAAACAGTTC +
Preference number: 2 (lower is better)
Translates to: RLPLLWTHCDALVALGQREIILV*IFIKQF
Trigger: GAACTGTTTGATGAAGATCCAGACAAGGATGATTTC...TCTCTGCCCCAGTGCCACCAGTGCATCACAGTGTGTCCACAATAAAGGCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp AGAGCCAGAGGAGCTAGAGTTTTAGGCAGCTGTGAGCCATCTGACAAAGGTGTTAGTCTAACTGACAGGTaGAATGAACCTCAGTGTAAG +
Preference number: 2 (lower is better)
Translates to: RARGARVLGSCEPSDKGVSLTDR*NEPQCK
Trigger: CTTACACTGAGGTTCATTCCACCTGTCAGTTAGACT...AACACCTTTGTCAGATGGCTCACAGCTGCCTAAAACTCTAGCTCCTCTGGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR GCA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACACAAGTCCAGGTATCTaGTTTCCAGCAGGTGCAGCT +
Preference number: 2 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYTSPGI*FPAGAA
Trigger: AGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGT...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR GCA 90 bp AAATACATGCGGACATATGGGTCAGAGCCATCTTCCGAGAAGGCAATGAGGTTTCAAAGCTCTCTGAACTaGAGACTTCTTCAAGACACC +
Preference number: 2 (lower is better)
Translates to: KYMRTYGSEPSSEKAMRFQSSLN*RLLQDT
Trigger: GGTGTCTTGAAGAAGTCTGCAGTTCAGAGAGCTTTG...AAACCTCATTGCCTTCTCGGAAGATGGCTCTGACCCATATGTCCGCATGTATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp CCTTTGCACCTCAGGCAGCGAAACACTGAAGTCGAAGCTCTGATCAAACACAGGCTGGACAAGAGGATTTaGGTTGCTGTTTATTTTCTT +
Preference number: 2 (lower is better)
Translates to: PLHLRQRNTEVEALIKHRLDKRI*VAVYFL
Trigger: AAGAAAATAAACAGCAACCCAAATCCTCTTGTCCAG...CCTGTGTTTGATCAGAGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp ACAGGTGGAATGAACCTCAGTGTAAGTCTCTGTGATGGACAACAGAGTGTTTTTAATTCCATAGGGGTCTaGTTTTCCCTTGACAAGGCC +
Preference number: 2 (lower is better)
Translates to: TGGMNLSVSLCDGQQSVFNSIGV*FSLDKA
Trigger: GGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATT...AAAAACACTCTGTTGTCCATCACAGAGACTTACACTGAGGTTCATTCCACCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp TCAGAACTACAACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTGGCCTCCCATACCCTaGGATTACAGATGTGAGGTA +
Preference number: 2 (lower is better)
Translates to: SELQLSGLVLLDLLSPFHWPPIP*DYRCEV
Trigger: TACCTCACATCTGTAATCCCAGGGTATGGGAGGCCA...GTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR CCA 90 bp GCTAAGCTGGAACCGCTGGTTTATAGTCATGTTGTCACTTGTAAGCAGTTGACTTTGCTCTGGAAGATTTaGTTGCCCACCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: AKLEPLVYSHVVTCKQLTLLWKI*LPTRII
Trigger: AATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAA...AGTCAACTGCTTACAAGTGACAACATGACTATAAACCAGCGGTTCCAGCTTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp CAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCAAATTAGCCATTCACTaGCTTCTCACTGTATTTTCC +
Preference number: 2 (lower is better)
Translates to: QNEDIQEISSLTAACWHCKLAIH*LLTVFS
Trigger: GGAAAATACAGTGAGAAGTCAGTGAATGGCTAATTT...GCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR GCA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTCTGGTAATAAATACATaGGGACATATGGGTCAGAGC +
Preference number: 2 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGLVINT*GHMGQS
Trigger: GCTCTGACCCATATGTCCGCATGTATTTATTACCAG...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR GCA 90 bp AAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCTTAATATATTCAGCCTaGTACCAGGTTGCTGACTGG +
Preference number: 2 (lower is better)
Translates to: KGHFISLSRLQDGRKLDSLIYSA*YQVADW
Trigger: CCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAA...GGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CCA 90 bp ACCTGCCTTTCTCCTGCAACTAAAATGCCACCCTTGAATATTTTATGTGCATATCTGTGTGTGGACTTATaGCCAGGTTCTCCCATCAAG +
Preference number: 2 (lower is better)
Translates to: TCLSPATKMPPLNILCAYLCVDL*PGSPIK
Trigger: CTTGATGGGAGAACCTGGCCATAAGTCCACACACAG...ATATGCACATAAAATATTCAAGGGTGGCATTTTAGTTGCAGGAGAAAGGCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTCCTTTCCACTTAGACTaGAGATGCTACTTGAAGACT +
Preference number: 2 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGPFHLD*RCYLKT
Trigger: AGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGG...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 90 bp TTTGGGCAAAATATAATGTATGTTTCTTTTTCCCAAGACAGAGTTTaGAGGTGTAGCCCAGGCTGGCCTTTAACACTTGGGTCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: FGQNIMYVSFSQDRV*RCSPGWPLTLGSSW
Trigger: CCAAGAAGACCCAAGTGTTAAAGGCCAGCCTGGGCTACACCTCAAAACTCTGTCTTGGGAAAAAGAAACATACATTATATTTTGCCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR GCA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTCATTTGTGCATCTTTTaGTTACAGACAAGCATAGCT +
Preference number: 2 (lower is better)
Translates to: HKMRISRKSQALQQLAGTHLCIF*LQTSIA
Trigger: AGCTATGCTTGTCTGTAAGCAAAAGATGCACAAATG...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTAAGAATCTATTTACATaGTGTAGTGCACCTCCAGGA +
Preference number: 2 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGKNLFT*CSAPPG
Trigger: TCCTGGAGGTGCACTACACCATGTAAATAGATTCTT...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR CCA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGTGTCTGTCCTGTGTGTaGACTTATGGCCAGGTTCTC +
Preference number: 2 (lower is better)
Translates to: HGQATSFNITCLSPATKMCLSCV*TYGQVL
Trigger: GAGAACCTGGCCATAAGTCCACACACAGGACAGACA...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CCA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTGTCAGAGTTGGTGAATaGCAGTCCATATTGTTGATC +
Preference number: 2 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGVRVGE*QSILLI
Trigger: GATCAACAATATGGACTGCCATTCACCAACTCTGAC...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CCA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCATTTCTATGCAGGAAGTaGTTTAATATATTCAGCCTG +
Preference number: 2 (lower is better)
Translates to: TGFRASEAKIVRRKSELPFLCRK*FNIFSL
Trigger: CAGGCTGAATATATTAAACCACTTCCTGCATAGAAA...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 90 bp ACTAAAGCCTCATACACTTCATTCCATTTTGGACTAAGGTTCTCTTaGATGACTTTGCTCTGGAAGATTTGGTTGCCCACCCGGATAATT +
Preference number: 2 (lower is better)
Translates to: TKASYTSFHFGLRFS*MTLLWKIWLPTRII
Trigger: AATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTGTATGAGGCTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
3UTR-3UTR CCA 90 bp TGTGCATATATGTTCATGTGTGTACCTACACAAACTTTCTCACAATCCTACTCAGAGGAAGGTGTCAGATaGCAGGAGAGAGATTACTCT +
Preference number: 2 (lower is better)
Translates to: CAYMFMCVPTQTFSQSYSEEGVR*QERDYS
Trigger: AGAGTAATCTCTCTCCTGCCATCTGACACCTTCCTC...TGAGTAGGATTGTGAGAAAGTTTGTGTAGGTACACACATGAACATATATGCACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGTGGCATGGCACAAAATaGGGATATCCAGGAAATCTC +
Preference number: 2 (lower is better)
Translates to: HGQATSFNITCLSPATKMWHGTK*GYPGNL
Trigger: GAGATTTCCTGGATATCCTCATTTTGTGCCATGCCA...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR TCA 90 bp ATTTGTTTCTTAGCTTACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGATATGTTGGACACTTaGTACAAAGCTTATATGACC +
Preference number: 2 (lower is better)
Translates to: ICFLAYRLQGIRSQNSQKDMLDT*YKAYMT
Trigger: GGTCATATAAGCTTTGTATCAAGTGTCCAACATATC...CTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGTAAGCTAAGAAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR GCA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGGGTAGTACATATGGTTaGAAGGCTGCTTCTGTTTTC +
Preference number: 2 (lower is better)
Translates to: HGQATSFNITCLSPATKMGSTYG*KAASVF
Trigger: GAAAACAGAAGCAGCCTTGCAACCATATGTACTACC...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR CCA 90 bp TATAGGAAAGGCAAATTCATATCCAGAAACAGTATCCACTCCAGTAAGAGCAAATGTTGTTGGTATCTCTaGCACTCAATAGCAGCTGTA +
Preference number: 2 (lower is better)
Translates to: YRKGKFISRNSIHSSKSKCCWYL*HSIAAV
Trigger: TACAGCTGCTATTGAGTGCCAGAGATACCAACAACA...TTTGCTCTTACTGGAGTGGATACTGTTTCTGGATATGAATTTGCCTTTCCTATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 90 bp AAATTCATATCCAGAAACAGTATCCACTCCAGTAAGAGCAAAGCATaGTTCTTTCTATGCAGGAAGTGGTTTAATATATTCAGCCTGCTA +
Preference number: 2 (lower is better)
Translates to: KFISRNSIHSSKSKA*FFLCRKWFNIFSLL
Trigger: TAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAAAGAACAATGCTTTGCTCTTACTGGAGTGGATACTGTTTCTGGATATGAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CCA 90 bp TGTGCATATATGTTCATGTGTGTACCTACACAAACTTTCTCACAATCCTACTCACACTTCATTCCATTTTaGACTAAGGTTCTCTTTGAT +
Preference number: 2 (lower is better)
Translates to: CAYMFMCVPTQTFSQSYSHFIPF*TKVLFD
Trigger: ATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTG...TGAGTAGGATTGTGAGAAAGTTTGTGTAGGTACACACATGAACATATATGCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp CCTTGGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTaGAGGAGCTCCTGCCTAGGTCACGATGCCCGAGAG +
Preference number: 3 (lower is better)
Translates to: PWLRCGLERPRG*RSSCLGHDARE
Trigger: CTCTCGGGCATCGTGACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 72 bp CATGGCAGGCTTATCATCGACTCCCATGACTGGTGTTaGCGGAGCAGTGTTGGCACCACCGGTGCCTGGCGA +
Preference number: 3 (lower is better)
Translates to: HGRLIIDSHDWC*RSSVGTTGAWR
Trigger: TCGCCAGGCACCGGTGGTGCCAACACTGCTCCGTCAACACCAGTCATGGGAGTCGATGATAAGCCTGCCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp GGCTGGAGGAGCTCCTGCCTAGGTCACGATGCCCGAGAGGGCTGGCCTCAGGGGTCTGGACAAGAGGATTaGGGTTGCTGTTTATTTTCT +
Preference number: 3 (lower is better)
Translates to: GWRSSCLGHDAREGWPQGSGQED*GCCLFS
Trigger: AGAAAATAAACAGCAACCCAAATCCTCTTGTCCAGA...CCCCTGAGGCCAGCCCTCTCGGGCATCGTGACCTAGGCAGGAGCTCCTCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 72 bp GCTTCTCCTCCATGGCAGGCTTATCATCGACTCCCATaGCTGGTGTTGACGGAGCAGTGTTGGCACCACCGG +
Preference number: 3 (lower is better)
Translates to: ASPPWQAYHRLP*LVLTEQCWHHR
Trigger: CCGGTGGTGCCAACACTGCTCCGTCAACACCAGTCATGGGAGTCGATGATAAGCCTGCCATGGAGGAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp GTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTTaGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTGG +
Preference number: 3 (lower is better)
Translates to: VICLRQCLGWVP*LRCGLERPRGW
Trigger: CCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 72 bp CCTGAGTGGCAATGGGCAGTGATATGTCTGAGGCAATaGTTGGGGTGGGTTCCTTGGCTGCGATGTGGCTTG +
Preference number: 3 (lower is better)
Translates to: PEWQWAVICLRQ*LGWVPWLRCGL
Trigger: CAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp CAATGGGCAGTGATATGTCTGAGGCAATGCTTGGGGTaGGTTCCTTGGCTGCGATGTGGCTTGGAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: QWAVICLRQCLG*VPWLRCGLERP
Trigger: TGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 72 bp AGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATaGGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SLLALRRIFCHV*GEAREGVCPVC
Trigger: ACACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR GCA 72 bp TTCCTTTGGGAGCTGTGCCGGATAGTCAGCTGGATCTaGCCCAGAGGAGATTGTCCCAGGGTTGTCCCATTT +
Preference number: 3 (lower is better)
Translates to: FLWELCRIVSWI*PRGDCPRVVPF
Trigger: AAATGGGACAACCCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp AGCTTATTCCTTTGGGAGCTGTGCCGGATAGTCAGCTaGATCTGCCCCAGAGGAGATTGTCCCAGGGTTGTC +
Preference number: 3 (lower is better)
Translates to: SLFLWELCRIVS*ICPRGDCPRVV
Trigger: GACAACCCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCACTGCCCCAGAGGAGATaGTCCCAGGGTTGTCCCATT +
Preference number: 3 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQALPQRR*SQGCPI
Trigger: AATGGGACAACCCTGGGACAATCTCCTCTGGGGCAG...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TCACTAGGAGAGATAGGGAGTAAACCATTTCCTTTTTCACCCCTTGATTCCTGGCAGCCTGCTACCAGGTaGCTGACTGGGCGCCCTGCG +
Preference number: 3 (lower is better)
Translates to: SLGEIGSKPFPFSPLDSWQPATR*LTGRPA
Trigger: CGCAGGGCGCCCAGTCAGCAACCTGGTAGCAGGCTG...CCAGGAATCAAGGGGTGAAAAAGGAAATGGTTTACTCCCTATCTCTCCTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR GCA 72 bp AGGATGCAGGACAAGGCAGAAACAAGTCCAGGTATCTaGTTTCCAGCAGGTGCAGCTGACAGAGCTCCACAC +
Preference number: 3 (lower is better)
Translates to: RMQDKAETSPGI*FPAGAADRAPH
Trigger: GTGTGGAGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTTGTCCTGCATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR GCA 72 bp TGCACAACCACGATGAGCTTATTCCTTTGGGAGCTGTaGCGGATAGTCAGCTGGATCTGCCCCAGAGGAGAT +
Preference number: 3 (lower is better)
Translates to: CTTTMSLFLWEL*RIVSWICPRGD
Trigger: ATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp CCCAGGCTGGCCTTTAACACTTGGGTCTTCTTGGTGTaGCCTCCCATACCCTGGGATTACAGATGTGAGGTA +
Preference number: 3 (lower is better)
Translates to: PRLAFNTWVFLV*PPIPWDYRCEV
Trigger: TACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 72 bp TGTAGCCCAGGCTGGCCTTTAACACTTGGGTCTTCTTaGTGTGGCCTCCCATACCCTGGGATTACAGATGTG +
Preference number: 3 (lower is better)
Translates to: CSPGWPLTLGSS*CGLPYPGITDV
Trigger: CACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCTGGGCTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 72 bp AAGCTCGGGAAGGTGTCTGTCCTGTGTGTGGACTTATaGCCAGGTTCTCCCATCAAGAGCAAGTGCAGTGCT +
Preference number: 3 (lower is better)
Translates to: KLGKVSVLCVDL*PGSPIKSKCSA
Trigger: AGCACTGCACTTGCTCTTGATGGGAGAACCTGGCCATAAGTCCACACACAGGACAGACACCTTCCCGAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR CCA 72 bp GTTGACGTAGCCTTTGTCTCAGCTCCTGAGTGGCAATaGGCAGTGATATGTCTGAGGCAATGCTTGGGGTGG +
Preference number: 3 (lower is better)
Translates to: VDVAFVSAPEWQ*AVICLRQCLGW
Trigger: CCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGGAGCTGAGACAAAGGCTACGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATGTCCCAAGACAGAGTTTaGAGGTGTAGCCCAGGCTGG +
Preference number: 3 (lower is better)
Translates to: SQALQQLAGTAQDLLSRMSQDRV*RCSPGW
Trigger: CCAGCCTGGGCTACACCTCAAAACTCTGTCTTGGGA...CATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR TCA 72 bp AGAGGAAGGTGTCAGATGGCAGGAGAGAGATTACTCTaGCGGTATGACTACCTGGGGTGTGCTGTGAAGAGC +
Preference number: 3 (lower is better)
Translates to: RGRCQMAGERLL*RYDYLGCAVKS
Trigger: GCTCTTCACAGCACACCCCAGGTAGTCATACCGTCAGAGTAATCTCTCTCCTGCCATCTGACACCTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR TCA 72 bp AAGTGGTTTAATATATTCAGCCTGCTACCAGGTTGCTaGCTGGGCGCCCTGCGGATTGATGCCATGTCTGGG +
Preference number: 3 (lower is better)
Translates to: KWFNIFSLLPGC*LGALRIDAMSG
Trigger: CCCAGACATGGCATCAATCCGCAGGGCGCCCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR GCA 72 bp CAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTaGGCAGGATCTTTTGTCACGTATGAGGGGAAGCTC +
Preference number: 3 (lower is better)
Translates to: QEISSLTAACWH*AGSFVTYEGKL
Trigger: GAGCTTCCCCTCATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR GCA 72 bp TACCCTACAGTGGGTAATCCAGATGGGACCATTCACTaGAGCAGGCTGCACTCTCTGTATCTGCCTGAGGTT +
Preference number: 3 (lower is better)
Translates to: YPTVGNPDGTIH*SRLHSLYLPEV
Trigger: AACCTCAGGCAGATACAGAGAGTGCAGCCTGCTGCAGTGAATGGTCCCATCTGGATTACCCACTGTAGGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR GCA 72 bp ATACCACTGGGTCCAGCCCTTGGCGAGTTCTTCAGATaGCAGAACAACCAGCACTTTGCCAAGAAGCCCTTT +
Preference number: 3 (lower is better)
Translates to: IPLGPALGEFFR*QNNQHFAKKPF
Trigger: AAAGGGCTTCTTGGCAAAGTGCTGGTTGTTCTGGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGTGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp CATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATaGGCTTATTGGGCAAAGACAAGGATGGGTCCAGCG +
Preference number: 3 (lower is better)
Translates to: HPSFLSPRPLCP*AYWAKTRMGPA
Trigger: CGCTGGACCCATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CAA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCAGCACCTTGTCAAGGTTaGCAGCATCAGGCATCAGTG +
Preference number: 3 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQAAPCQG*QHQASV
Trigger: CACTGATGCCTGATGCTGCAAACCTTGACAAGGTGC...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp CCCTTGGCGAGTTCTTCAGATGCCAGAACAACCAGCACTTTGCCAAGAAGCCCTATCCAATGTTCTCCTTaGCACCTCAGGCAGCGAAAC +
Preference number: 3 (lower is better)
Translates to: PLASSSDARTTSTLPRSPIQCSP*HLRQRN
Trigger: GTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGAT...AGGGCTTCTTGGCAAAGTGCTGGTTGTTCTGGCATCTGAAGAACTCGCCAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATGAAGGTGTGTTCCATGTaGAGGTGCCACGTGATACAC +
Preference number: 3 (lower is better)
Translates to: SQALQQLAGTAQDLLSRMKVCSM*RCHVIH
Trigger: GTGTATCACGTGGCACCTCAACATGGAACACACCTT...CATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTAAGCCTTACAGCAGCTaGCTGGCACTGCGCAGGATC +
Preference number: 3 (lower is better)
Translates to: HKMRISRKSQALQQLAGTKPYSS*LALRRI
Trigger: GATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTT...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp ACAACCACGATGAGCTTATTCCTTTGGGAGCTGTGCCGGATAGTCAGCTGGATCATGTCTGCCAGCACCTaGTCAAGGTTTGCAGCATCA +
Preference number: 3 (lower is better)
Translates to: TTTMSLFLWELCRIVSWIMSAST*SRFAAS
Trigger: TGATGCTGCAAACCTTGACAAGGTGCTGGCAGACAT...GATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp AACACTTGGGTCTTCTTGGTGTGGCCTCCCATACCCTaGGATTACAGATGTGAGGTACAACGCCTAGCATGT +
Preference number: 3 (lower is better)
Translates to: NTWVFLVWPPIP*DYRCEVQRLAC
Trigger: ACATGCTAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 72 bp TTTTCCCAAGACAGAGTTTTGAGGTGTAGCCCAGGCTaGCCTTTAACACTTGGGTCTTCTTGGTGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: FSQDRVLRCSPG*PLTLGSSWCGL
Trigger: GAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCTGGGCTACACCTCAAAACTCTGTCTTGGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CCA 72 bp GATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTaGCACTGCGCAGGATCTTTTGTCACGTATGAGGGG +
Preference number: 3 (lower is better)
Translates to: DIQEISSLTAAC*HCAGSFVTYEG
Trigger: CCCCTCATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR GCA 72 bp CTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGATaGTACTTGAAGACTCAGATGATGCACGTGGGGGCA +
Preference number: 3 (lower is better)
Translates to: LDLLSPFHLDWR*YLKTQMMHVGA
Trigger: TGCCCCCACGTGCATCATCTGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR GCA 72 bp GCATCAGGCATCAGTGTGAGCCACTCTAACTTCAAATaGAGCTTTCCTTTGGGAACCTCGTCCAGAGTGAAC +
Preference number: 3 (lower is better)
Translates to: ASGISVSHSNFK*SFPLGTSSRVN
Trigger: GTTCACTCTGGACGAGGTTCCCAAAGGAAAGCTGCATTTGAAGTTAGAGTGGCTCACACTGATGCCTGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 72 bp TCTTTCTATGCAGGAAGTGGTTTAATATATTCAGCCTaGTACCAGGTTGCTGACTGGGCGCCCTGCGGATTG +
Preference number: 3 (lower is better)
Translates to: SFYAGSGLIYSA*YQVADWAPCGL
Trigger: CAATCCGCAGGGCGCCCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 72 bp GATTACTCTGACGGTATGACTACCTGGGGTGTGCTGTaGAGAGCCACAGACTGTGTTACAACTGTACGTGTT +
Preference number: 3 (lower is better)
Translates to: DYSDGMTTWGVL*RATDCVTTVRV
Trigger: AACACGTACAGTTGTAACACAGTCTGTGGCTCTTCACAGCACACCCCAGGTAGTCATACCGTCAGAGTAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR TCA 72 bp GATTTGGTTGCCCACCCGGATAATTCCATAGGGGTCTaGTTTTCCCTTGACAAGGCCTTTAAGGTAGGTGTC +
Preference number: 3 (lower is better)
Translates to: DLVAHPDNSIGV*FSLDKAFKVGV
Trigger: GACACCTACCTTAAAGGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATTATCCGGGTGGGCAACCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
3UTR TCA 72 bp TTAACCTCAACCTCAAGGTCCTGGCGCCTGGGGTTATaGATGAAGAAAGTGAAGTTTTCCTCCCATACAGGC +
Preference number: 3 (lower is better)
Translates to: LTSTSRSWRLGL*MKKVKFSSHTG
Trigger: GCCTGTATGGGAGGAAAACTTCACTTTCTTCATTCATAACCCCAGGCGCCAGGACCTTGAGGTTGAGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 72 bp GTCAGGTCAGAGTTGGTGAATGGCAGTCCATATTGTTaGTCCAAGGCACATCCCTCATTTCTGTCACCAAGG +
Preference number: 3 (lower is better)
Translates to: VRSELVNGSPYC*SKAHPSFLSPR
Trigger: CCTTGGTGACAGAAATGAGGGATGTGCCTTGGATCAACAATATGGACTGCCATTCACCAACTCTGACCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR GCA 72 bp TCACCTCTTTACAGTAACAACAGACCTGTCTTCATCTaGGAGAAGGTGTGTTCCATGTTGAGGTGCCACGTG +
Preference number: 3 (lower is better)
Translates to: SPLYSNNRPVFI*EKVCSMLRCHV
Trigger: CACGTGGCACCTCAACATGGAACACACCTTCTCGCAGATGAAGACAGGTCTGTTGTTACTGTAAAGAGGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 72 bp AGGAAACTGGATTCCAGAACTGTGGGTTCACTGTTGTaGTTCCCTGACTGTGAAGTGAGTTCCTTGGTCAGA +
Preference number: 3 (lower is better)
Translates to: RKLDSRTVGSLL*FPDCEVSSLVR
Trigger: TCTGACCAAGGAACTCACTTCACAGTCAGGGAAGCACAACAGTGAACCCACAGTTCTGGAATCCAGTTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 72 bp TTTCAAGTTGACGTAGCCTTTGTCTCAGCTCCTGAGTaGCAATGGGCAGTGATATGTCTGAGGCAATGCTTG +
Preference number: 3 (lower is better)
Translates to: FQVDVAFVSAPE*QWAVICLRQCL
Trigger: CAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTCAGGAGCTGAGACAAAGGCTACGTCAACTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACAACACTTGGGTCTTCTaGGTGTGGCCTCCCATACCC +
Preference number: 3 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYNTWVF*VWPPIP
Trigger: GGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTT...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR CAA 90 bp AAATACATGCGGACATATGGGTCAGAGCCATCTTCCGAGAAGGCAATGAGGTTTGATGAGCTTATTCCTTaGGGAGCTGTGCCGGATAGT +
Preference number: 3 (lower is better)
Translates to: KYMRTYGSEPSSEKAMRFDELIP*GAVPDS
Trigger: ACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATC...AAACCTCATTGCCTTCTCGGAAGATGGCTCTGACCCATATGTCCGCATGTATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTGTCACCAAGGCCACTTaGTCCATGGGCTTATTGGGC +
Preference number: 3 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGVTKAT*SMGLLG
Trigger: GCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGAC...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CAA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGGAATGGCAGTCCATATaGTTGATCCAAGGCACATCC +
Preference number: 3 (lower is better)
Translates to: FWILAEMLPPLETKLLGQEWQSI*LIQGTS
Trigger: GGATGTGCCTTGGATCAACAATATGGACTGCCATTC...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CAA 90 bp ATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGTTCTCTTTGATGACTTaGCTCTGGAAGATTTGGTTG +
Preference number: 3 (lower is better)
Translates to: MRISRKSQALQQLAGTAQFSLMT*LWKIWL
Trigger: CAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAA...CTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 72 bp CAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTaGGCTTCCAGGTCACTGAACATGTTTTGGATCCTG +
Preference number: 3 (lower is better)
Translates to: QGIRSQNSQKEV*ASRSLNMFWIL
Trigger: CAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 72 bp TCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTaGATTCCAGAACTGTGGGTTCACTGTTGTGCTTCC +
Preference number: 3 (lower is better)
Translates to: SSLYQGFRMVGN*IPELWVHCCAS
Trigger: GGAAGCACAACAGTGAACCCACAGTTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR-3UTR CAA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCAGGTTCAATGTCTTCTTaGATACATGTGTTTTCCTTC +
Preference number: 3 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQAGSMSS*IHVFSF
Trigger: GAAGGAAAACACATGTATCAAAGAAGACATTGAACC...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR TCA 72 bp ATCTATTTTATATCTTTAGGACACTGGAGTGTGCCTTaGTGGCAAGTCAGCCCTCCTCATGCAGCACTCAGA +
Preference number: 3 (lower is better)
Translates to: IYFISLGHWSVP*WQVSPPHAALR
Trigger: TCTGAGTGCTGCATGAGGAGGGCTGACTTGCCATCAAGGCACACTCCAGTGTCCTAAAGATATAAAATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR TCA 72 bp GTTCCTTGGTCAGAAGCAATTCTGTGTGCAATACCATaGTGGTGGGTAAGGTATAGTGATGTCCATGGATGG +
Preference number: 3 (lower is better)
Translates to: VPWSEAILCAIP*WWVRYSDVHGW
Trigger: CCATCCATGGACATCACTATACCTTACCCACCATCATGGTATTGCACACAGAATTGCTTCTGACCAAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 72 bp AAAATAGTCAGAAGGAAGTCTGAGCTTCCAGGTCACTaGACATGTTTTGGATCCTGGCAGAAATGCTCCCAC +
Preference number: 3 (lower is better)
Translates to: KIVRRKSELPGH*TCFGSWQKCSH
Trigger: GTGGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACTTCCTTCTGACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 72 bp GAGTCTGTGCCCTTTGTCATCCTGCTTGAATTAGGTTaGTGTAGTCTTCCATTGGCTGAAATCCCAGGACAT +
Preference number: 3 (lower is better)
Translates to: ESVPFVILLELG*CSLPLAEIPGH
Trigger: ATGTCCTGGGATTTCAGCCAATGGAAGACTACATCAACCTAATTCAAGCAGGATGACAAAGGGCACAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 72 bp AGCCCTCCTCATGCAGCACTCAGAACTACAACTAAGTaGACTAGTATTACTAGACCTTCTGTCTCCTTTCCA +
Preference number: 3 (lower is better)
Translates to: SPPHAALRTTTK*TSITRPSVSFP
Trigger: TGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGAGTGCTGCATGAGGAGGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR CAA 90 bp CAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCCCTAAGAAATCATCCTaGTCTGGATCTTCATCAAAC +
Preference number: 3 (lower is better)
Translates to: QNEDIQEISSLTAACWHCPKKSS*SGSSSN
Trigger: GTTTGATGAAGATCCAGACAAGGATGATTTCTTAGG...GCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp CTAGGCCAGCAGTATTTAAGGTTCCAGAAACAGGAAGCAAAAATTTTCCTAGTGGTCTGGGGTTCAGTGTaGGGTCTCTGTTGTTGGTAT +
Preference number: 3 (lower is better)
Translates to: LGQQYLRFQKQEAKIFLVVWGSV*GLCCWY
Trigger: ATACCAACAACAGAGACCCAACACTGAACCCCAGAC...CACTAGGAAAATTTTTGCTTCCTGTTTCTGGAACCTTAAATACTGCTGGCCTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 72 bp GTATCGAATCTTACTCTCTTGAGCCTTGTGACCGACTaGCATCTGGACAAGAGGATTTGGGTTGCTGTTTAT +
Preference number: 3 (lower is better)
Translates to: VSNLTLLSLVTD*HLDKRIWVAVY
Trigger: ATAAACAGCAACCCAAATCCTCTTGTCCAGATGTCAGTCGGTCACAAGGCTCAAGAGAGTAAGATTCGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CCA 72 bp GTATTACTAGACCTTCTGTCTCCTTTCCACTTAGACTaGAGATGCTACTTGAAGACTCAGATGATGCACGTG +
Preference number: 3 (lower is better)
Translates to: VLLDLLSPFHLD*RCYLKTQMMHV
Trigger: CACGTGCATCATCTGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR-3UTR CAA 90 bp TCATTCCATTTTGGACTAAGGTTCTCTTTGATGACTTTGCTCTGGAAGATTTGGAAGGTGTGTTCCATGTaGAGGTGCCACGTGATACAC +
Preference number: 3 (lower is better)
Translates to: SFHFGLRFSLMTLLWKIWKVCSM*RCHVIH
Trigger: GTGTATCACGTGGCACCTCAACATGGAACACACCTT...CCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTACATTTGTGCATCTTTaGCTTACAGACAAGCATAGC +
Preference number: 3 (lower is better)
Translates to: HKMRISRKSQALQQLAGTTFVHL*LTDKHS
Trigger: GCTATGCTTGTCTGTAAGCAAAAGATGCACAAATGT...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TGTCTGGATCTTCATCAAACAGTTCAATCTCCAATTCTTGTCCAGGGTGTTCATTTTGCTCTGGAAGATTaGGTTGCCCACCCGGATAAT +
Preference number: 3 (lower is better)
Translates to: CLDLHQTVQSPILVQGVHFALED*VAHPDN
Trigger: ATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAA...ATGAACACCCTGGACAAGAATTGGAGATTGAACTGTTTGATGAAGATCCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
3UTR CCA 72 bp ATTTTTAAGGTGCTGTTTGGACCCGAGTTGCTAAGCTaGAACCGCTGGTTTATAGTCATGTTGTCACTTGTA +
Preference number: 3 (lower is better)
Translates to: IFKVLFGPELLS*NRWFIVMLSLV
Trigger: TACAAGTGACAACATGACTATAAACCAGCGGTTCCAGCTTAGCAACTCGGGTCCAAACAGCACCTTAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGGTCTGGAGGCCTTTCTaGCTTTTCAAGATGGAGGAC +
Preference number: 3 (lower is better)
Translates to: HGQATSFNITCLSPATKMVWRPF*LFKMED
Trigger: GTCCTCCATCTTGAAAAGCAAGAAAGGCCTCCAGAC...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp TGTGCATATATGTTCATGTGTGTACCTACACAAACTTTCTCACAATCCTACTCAATTTTCCTCCCTTCTTaGGAGACAGAGGGCCGTTTC +
Preference number: 3 (lower is better)
Translates to: CAYMFMCVPTQTFSQSYSIFLPS*ETEGRF
Trigger: GAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAAAAT...TGAGTAGGATTGTGAGAAAGTTTGTGTAGGTACACACATGAACATATATGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAAAGTAAGAGCAAAGCATaGTTCTTTCTATGCAGGAAG +
Preference number: 3 (lower is better)
Translates to: AISSLYQGFRMVGNWIPESKSKA*FFLCRK
Trigger: CTTCCTGCATAGAAAGAACAATGCTTTGCTCTTACT...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 72 bp AGGTACAGAGGAAGGGAAGCAAGCATTCTTAACCACTaGGCCATCTGTCAGTCAGGAATATATTTTAAAAGC +
Preference number: 3 (lower is better)
Translates to: RYRGREASILNH*AICQSGIYFKS
Trigger: GCTTTTAAAATATATTCCTGACTGACAGATGGCTCAGTGGTTAAGAATGCTTGCTTCCCTTCCTCTGTACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR GCA 72 bp TCTCTCACAAGATGTAAAAAGCATAGAATAACAGACTaGCTTTATTGTGGACACACTGTGATGCACTGGTGG +
Preference number: 3 (lower is better)
Translates to: SLTRCKKHRITD*LYCGHTVMHWW
Trigger: CCACCAGTGCATCACAGTGTGTCCACAATAAAGGCAGTCTGTTATTCTATGCTTTTTACATCTTGTGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR CCA 72 bp TGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTaGTATGTTTGGTCACATAAGCTTCCCATAGGTTTA +
Preference number: 3 (lower is better)
Translates to: CKRSTRYSSQAL*YVWSHKLPIGL
Trigger: TAAACCTATGGGAAGCTTATGTGACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
3UTR-3UTR CAA 90 bp ACTGAAAAGCTTAACATTAAGTCCACATTGACAACCTGGAAGGAAGTAGTTTCATTTGCTCTGGAAGATTaGGTTGCCCACCCGGATAAT +
Preference number: 3 (lower is better)
Translates to: TEKLNIKSTLTTWKEVVSFALED*VAHPDN
Trigger: ATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAA...TGAAACTACTTCCTTCCAGGTTGTCAATGTGGACTTAATGTTAAGCTTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CAA 90 bp ACAGGTGGAATGAACCTCAGTGTAAGTCTCTGTGATGGACAACAGAGTGTTTTTTTCTCTTTGATGACTTaGCTCTGGAAGATTTGGTTG +
Preference number: 3 (lower is better)
Translates to: TGGMNLSVSLCDGQQSVFFSLMT*LWKIWL
Trigger: CAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAA...AAAAACACTCTGTTGTCCATCACAGAGACTTACACTGAGGTTCATTCCACCTGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CAA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACACAAGAGGATTTGGGTaGCTGTTTATTTTCTTCCCT +
Preference number: 3 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYTRGFG*LFIFFP
Trigger: AGGGAAGAAAATAAACAGCAACCCAAATCCTCTTGT...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR GCA 72 bp CTCTGCATAGGGACTGCCTGTACAAGAAATATAGAGTaGAAAATACAAATGGTAGTACATATGGTTGCAAGG +
Preference number: 3 (lower is better)
Translates to: LCIGTACTRNIE*KIQMVVHMVAR
Trigger: CCTTGCAACCATATGTACTACCATTTGTATTTTGCACTCTATATTTCTTGTACAGGCAGTCCCTATGCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR GCA 72 bp ATCCACTCCAGTAAGAGCAAAGCATTGTTCTTTCTATaGAGGAAGTGGTTTAATATATTCAGCCTGCTACCA +
Preference number: 3 (lower is better)
Translates to: IHSSKSKALFFL*RKWFNIFSLLP
Trigger: TGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAAAGAACAATGCTTTGCTCTTACTGGAGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CCA 72 bp ACTGAAAAGCTTAACATTAAGTCCACATTGACAACCTaGAAGGAAGTAGTTTCAGACTTCCCTGCACAAAGT +
Preference number: 3 (lower is better)
Translates to: TEKLNIKSTLTT*KEVVSDFPAQS
Trigger: ACTTTGTGCAGGGAAGTCTGAAACTACTTCCTTCCAGGTTGTCAATGTGGACTTAATGTTAAGCTTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR-3UTR CAA 90 bp ATTTGTTTCTTAGCTTACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGTCCATGGATGGTGATTaGGCAGACACTTTATATATA +
Preference number: 3 (lower is better)
Translates to: ICFLAYRLQGIRSQNSQKSMDGD*ADTLYI
Trigger: TATATATAAAGTGTCTGCCAAATCACCATCCATGGA...CTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGTAAGCTAAGAAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR TCA 72 bp AATAAAAATTGTATTAACATCTGGCATGGCACAAAATaGGGATATCCAGGAAATCTCAAGCCTTACAGCAGC +
Preference number: 3 (lower is better)
Translates to: NKNCINIWHGTK*GYPGNLKPYSS
Trigger: GCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTGCCATGCCAGATGTTAATACAATTTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR GCA 90 bp AGGCTGGCCTTTAACACTTGGGTCTTCTTGGTGTGGCCTCCCATACCCTGGGATAAGCTGCGCGCCAGCTaGCCCAGCAGCCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: RLAFNTWVFLVWPPIPWDKLRAS*PSSPGK
Trigger: CTTGCCGGGGCTGCTGGGGCAGCTGGCGCGCAGCTT...ATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp GCAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGCAGCAGCGCGAAGCTaGGCGCCAGCTGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: AGSFVTYEGKLGKVSVLCAAARS*APAAPA
Trigger: TGCTGGGGCAGCTGGCGCGCAGCTTCGCGCTGCTGC...ACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR GCA 90 bp AAGGCAGAAACAAGTCCAGGTATCTGCTTTCCAGCAGGTGCAGCTGACAGAGCTGCAGCAGCGCGAAGCTaGGCGCCAGCTGCCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KAETSPGICFPAGAADRAAAARS*APAAPA
Trigger: TGCTGGGGCAGCTGGCGCGCAGCTTCGCGCTGCTGC...AGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp TCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATGGATGCCCGAGAGGGCTaGCCTCAGGGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SQALQQLAGTAQDLLSRMDAREG*PQGAGA
Trigger: AGCCCCAGCCCCCTGAGGCCAGCCCTCTCGGGCATC...CATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp AGTCTGAGCTTCCAGGTCACTGAACATGTTTTGGATCCTGGCAGAAATGCTCCCGATGCCCGAGAGGGCTaGCCTCAGGGGGCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SLSFQVTEHVLDPGRNAPDAREG*PQGAGA
Trigger: AGCCCCAGCCCCCTGAGGCCAGCCCTCTCGGGCATC...GGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCAAAGCTGCGCGCCAGCTaGCCCAGCAGCCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: TGFRASEAKIVRRKSELPKLRAS*PSSPGK
Trigger: CTTGCCGGGGCTGCTGGGGCAGCTGGCGCGCAGCTT...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp GCAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTCCCAGGCGCACAGCTTaGTCCTCGTCCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: AGSFVTYEGKLGKVSVLCPRRTA*SSSSNS
Trigger: GCTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGG...ACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR GCA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTAAGCTGCGCGCCAGCTaGCCCAGCAGCCCCGGCAAG +
Preference number: 4 (lower is better)
Translates to: HKMRISRKSQALQQLAGTKLRAS*PSSPGK
Trigger: CTTGCCGGGGCTGCTGGGGCAGCTGGCGCGCAGCTT...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR CCA 90 bp CAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGGAGAGGCCAAGAGGCTaGAGGAGCTCCTGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: QDLLSRMRGSSGRCLSCVERPRG*RSSCLG
Trigger: ACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTC...CACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp AGTGATATGTCTGAGGCAATGCTTGGGGTGGGTTCCTaGGCTGCGATGTGGCTTGGAGAGGCCAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SDMSEAMLGVGS*AAMWLGEAKRL
Trigger: CAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 72 bp GAGTGGCAATGGGCAGTGATATGTCTGAGGCAATGCTaGGGGTGGGTTCCTTGGCTGCGATGTGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: EWQWAVICLRQC*GWVPWLRCGLE
Trigger: CTCCAAGCCACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCTCAGACATATCACTGCCCATTGCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp TTTAGGACACTGGAGTGTGCCTTGATGGCAAGTCAGCCCTCCTCATGCAGCACTTCAGTGTCTGGAAAATaGACCCAGGCGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: FRTLECALMASQPSSCSTSVSGK*TQAGRS
Trigger: CGACCTGCCCGCCTGGGTTCATTTTCCAGACACTGA...AGTGCTGCATGAGGAGGGCTGACTTGCCATCAAGGCACACTCCAGTGTCCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp CATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGCCCAGGCGCACAGCTTaGTCCTCGTCCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: HPSFLSPRPLCPWAYWAKPRRTA*SSSSNS
Trigger: GCTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGG...CTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp AGGCTGGCCTTTAACACTTGGGTCTTCTTGGTGTGGCCTCCCATACCCTGGGATAGGCAATGCTTGGGGTaGGTTCCTTGGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: RLAFNTWVFLVWPPIPWDRQCLG*VPWLRC
Trigger: ACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCT...ATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp GCGAGTTCTTCAGATGCCAGAACAACCAGCACTTTGCCAAGAAGCCCTTTATCTCCAGCAGCACCCAACTaGAGCTCAGCCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: ASSSDARTTSTLPRSPLSPAAPN*SSAPGS
Trigger: GCTACCTGGGGCTGAGCTTCAGTTGGGTGCTGCTGG...AGATAAAGGGCTTCTTGGCAAAGTGCTGGTTGTTCTGGCATCTGAAGAACTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCACCAGCAGCACCCAACTaGAGCTCAGCCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: TGFRASEAKIVRRKSELPPAAPN*SSAPGS
Trigger: GCTACCTGGGGCTGAGCTTCAGTTGGGTGCTGCTGG...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp GCAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGGGGCTTCTCCTCCATaGCAGGCTTATCATCGACTC +
Preference number: 4 (lower is better)
Translates to: AGSFVTYEGKLGKVSVLCGASPP*QAYHRL
Trigger: GAGTCGATGATAAGCCTGCCATGGAGGAGAAGCCCC...ACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp GGGGTGAGGGAGCTCTGCATTCACTGGCTCTCCAGCTaGCATAGTCTAACTGACAGGTGGAATGAACCTCAG +
Preference number: 4 (lower is better)
Translates to: GVRELCIHWLSS*HSLTDRWNEPQ
Trigger: CTGAGGTTCATTCCACCTGTCAGTTAGACTATGCAAGCTGGAGAGCCAGTGAATGCAGAGCTCCCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR CAA 72 bp AGCAGTGCAGATGAAAGGCCATCACTGGCTTGGTCCTaGTCAGCTCTGATGTCTGCCAGCACCTTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSADERPSLAWS*SALMSASTLSR
Trigger: CCTTGACAAGGTGCTGGCAGACATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCTTTCATCTGCACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 72 bp CCATCTTCTGTGAGGTCATACCACTGGGTCCAGCCCTaGGCGAGTTCTTCAGATGCCAGAACAACCAGCACT +
Preference number: 4 (lower is better)
Translates to: PSSVRSYHWVQP*ASSSDARTTST
Trigger: AGTGCTGGTTGTTCTGGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGTGGTATGACCTCACAGAAGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp TTCTTGGTGTGGCCTCCCATACCCTGGGATTACAGATGTGAGGTACAACGCCTAACTCTCAGGGGCTGCTaGCCCACATCCACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: FLVWPPIPWDYRCEVQRLTLRGC*PTSTFV
Trigger: CACAAAAGTGGATGTGGGTCAGCAGCCCCTGAGAGT...TAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp ATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGGTCCTTGTCAGCTCTaGTGTCTGCCAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: MRISRKSQALQQLAGTAQGPCQL*CLPAPC
Trigger: ACAAGGTGCTGGCAGACATCAGAGCTGACAAGGACC...CTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp GCAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTTTCCTTTGGGAGCTGTaGCGGATAGTCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: AGSFVTYEGKLGKVSVLCFLWEL*RIVSWI
Trigger: GATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAA...ACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGGAGAGGCCAAGAGGCTaGAGGAGCTCCTGCCTAGGT +
Preference number: 4 (lower is better)
Translates to: FWILAEMLPPLETKLLGQERPRG*RSSCLG
Trigger: ACCTAGGCAGGAGCTCCTCCAGCCTCTTGGCCTCTC...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp GCGAGTTCTTCAGATGCCAGAACAACCAGCACTTTGCCAAGAAGCCCTTTATCTTCAGTGTCTGGAAAATaGACCCAGGCGGGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: ASSSDARTTSTLPRSPLSSVSGK*TQAGRS
Trigger: CGACCTGCCCGCCTGGGTTCATTTTCCAGACACTGA...AGATAAAGGGCTTCTTGGCAAAGTGCTGGTTGTTCTGGCATCTGAAGAACTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAACCGTTTCACTTGAGCTaGATGCTGGTAGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LHTAQETHHYTTGEALEEPFHLS*MLVVWR
Trigger: CCTCCAGACTACCAGCATTCAGCTCAAGTGAAACGG...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAACTTCCGAGAAGGCAATaGGGTTTCTGCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: LHTAQETHHYTTGEALEELPRRQ*GFCRSA
Trigger: TGCACTCCTGCAGAAACCTCATTGCCTTCTCGGAAG...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp ATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGACAAGGATGGTGGGTTCCTTGGCTaGGATGTGGCTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ISVTKATLSMGLLGKDKDGGFLG*DVAWRG
Trigger: GCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACC...ATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp ATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGCAGTATTTAAGGTTCCAGGGCTGCGATGTGGCTTaGAGAGGCCAAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: MLPPLETKLLGQQYLRFQGCDVA*RGQEAG
Trigger: TCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCC...CTGGAACCTTAAATACTGCTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp AGGCTGGCCTTTAACACTTGGGTCTTCTTGGTGTGGCCTCCCATACCCTGGGATATACATGCGGACATATaGGTCAGAGCCATCTTCCGA +
Preference number: 4 (lower is better)
Translates to: RLAFNTWVFLVWPPIPWDIHADI*VRAIFR
Trigger: TCGGAAGATGGCTCTGACCCATATGTCCGCATGTAT...ATCCCAGGGTATGGGAGGCCACACCAAGAAGACCCAAGTGTTAAAGGCCAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp CATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGACTGGGTCCAGCCCTTaGCGAGTTCTTCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: HPSFLSPRPLCPWAYWAKTGSSP*RVLQMP
Trigger: TGGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGT...CTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp TTCTTGGTGTGGCCTCCCATACCCTGGGATTACAGATGTGAGGTACAACGCCTAAGTGCACAACCACGATaGGCTTATTCCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: FLVWPPIPWDYRCEVQRLSAQPR*AYSFGS
Trigger: GCTCCCAAAGGAATAAGCTCATCGTGGTTGTGCACT...TAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp ACTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGATGCTACTTGAAGACTCAGGTGGGTTCCTTGGCTaGGATGTGGCTTGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: TRPSVSFPLRLEMLLEDSGGFLG*DVAWRG
Trigger: GCCTCTCCAAGCCACATCGCAGCCAAGGAACCCACC...TGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp TTCTTGGTGTGGCCTCCCATACCCTGGGATTACAGATGTGAGGTACAACGCCTATGCTCCACGCACAGCTaGCTCTATGGTTTCTCGAAA +
Preference number: 4 (lower is better)
Translates to: FLVWPPIPWDYRCEVQRLCSTHS*LYGFSK
Trigger: TTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCA...TAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAATCTTGCTTTTCAAGATaGAGGACCCGGAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: LHTAQETHHYTTGEALEESCFSR*RTRRAI
Trigger: GATTGCCCTCCGGGTCCTCCATCTTGAAAAGCAAGA...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp TCAGCTGGATCTGCCCCAGAGGAGATTGTCCCAGGGTaGTCCCATTTTCAAGTTGACGTAGCCTTTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SAGSAPEEIVPG*SHFQVDVAFVS
Trigger: TGAGACAAAGGCTACGTCAACTTGAAAATGGGACAACCCTGGGACAATCTCCTCTGGGGCAGATCCAGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 72 bp CAAGGCACATCCCTCATTTCTGTCACCAAGGCCACTTaGTCCATGGGCTTATTGGGCAAAGACAAGGATGGG +
Preference number: 4 (lower is better)
Translates to: QGTSLISVTKAT*SMGLLGKDKDG
Trigger: CCCATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGATGTGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp TCAGAACTACAACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACCCAGCAGCACCCAACTaGAGCTCAGCCCCAGGTAGC +
Preference number: 4 (lower is better)
Translates to: SELQLSGLVLLDLLSPFHPAAPN*SSAPGS
Trigger: GCTACCTGGGGCTGAGCTTCAGTTGGGTGCTGCTGG...GTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCACCGTTTCACTTGAGCTaGATGCTGGTAGTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGFRASEAKIVRRKSELPPFHLS*MLVVWR
Trigger: CCTCCAGACTACCAGCATTCAGCTCAAGTGAAACGG...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp TCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATGGGCGAGTTCTTCAGATaGCAGAACAACCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: SQALQQLAGTAQDLLSRMGEFFR*QNNQHF
Trigger: AAAGTGCTGGTTGTTCTGGCATCTGAAGAACTCGCC...CATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp ATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGACAAGGATGGGGCTTCTCCTCCATaGCAGGCTTATCATCGACTC +
Preference number: 4 (lower is better)
Translates to: ISVTKATLSMGLLGKDKDGASPP*QAYHRL
Trigger: GAGTCGATGATAAGCCTGCCATGGAGGAGAAGCCCC...ATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp ACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGGGCTGCGATGTGGCTTaGAGAGGCCAAGAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TKWTSITRPSVSFPLRLEGCDVA*RGQEAG
Trigger: TCCAGCCTCTTGGCCTCTCCAAGCCACATCGCAGCC...CTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp TTCTTGGTGTGGCCTCCCATACCCTGGGATTACAGATGTGAGGTACAACGCCTACTACGTTATCACCTGTaGCCTTGTCCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FLVWPPIPWDYRCEVQRLLRYHL*PCPIFC
Trigger: ACAGAAGATGGGACAAGGCCACAGGTGATAACGTAG...TAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp CCGCTGGTTTATAGTCATGTTGTCACTTGTAAGCAGTaGACTGAGTGGGATCCTCAGGCTCCCCAGAGAACA +
Preference number: 4 (lower is better)
Translates to: PLVYSHVVTCKQ*TEWDPQAPQRT
Trigger: TGTTCTCTGGGGAGCCTGAGGATCCCACTCAGTCAACTGCTTACAAGTGACAACATGACTATAAACCAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 72 bp ACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTaGCACCTCAGGCAGCGAAACACTGAAGTCGAAGCT +
Preference number: 4 (lower is better)
Translates to: TTVLHSHIQCSP*HLRQRNTEVEA
Trigger: AGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 72 bp ATGCCATGTCTGGGGTTCAGTGTTGGGTCTCTGTTGTaGGTATCTCTGGCACTCAATAGCAGCTGTAGTCAG +
Preference number: 4 (lower is better)
Translates to: MPCLGFSVGSLL*VSLALNSSCSQ
Trigger: CTGACTACAGCTGCTATTGAGTGCCAGAGATACCAACAACAGAGACCCAACACTGAACCCCAGACATGGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 72 bp GAAGGAAGTCTGAGCTTCCAGGTCACTGAACATGTTTaGGATCCTGGCAGAAATGCTCCCACCTCTGGAAAC +
Preference number: 4 (lower is better)
Translates to: EGSLSFQVTEHV*DPGRNAPTSGN
Trigger: GTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACTTCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp GGGGGCACTGTATCTGAACTCATTGGCACCAGCTTTTGTGACTGTAGTAGGGATAATTCCATAGGGGTCTaGTTTTCCCTTGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: GGTVSELIGTSFCDCSRDNSIGV*FSLDKA
Trigger: GGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATT...ATCCCTACTACAGTCACAAAAGCTGGTGCCAATGAGTTCAGATACAGTGCCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp AGTCTGAGCTTCCAGGTCACTGAACATGTTTTGGATCCTGGCAGAAATGCTCCCAATTCCATAGGGGTCTaGTTTTCCCTTGACAAGGCC +
Preference number: 4 (lower is better)
Translates to: SLSFQVTEHVLDPGRNAPNSIGV*FSLDKA
Trigger: GGCCTTGTCAAGGGAAAATCAGACCCCTATGGAATT...GGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCTCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp AAAGTGAAGTTTTCCTCCCATACAGGCTCACTAGTTTTGTATCGAATCTTACTCCCCAGGCGCACAGCTTaGTCCTCGTCCTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: KVKFSSHTGSLVLYRILLPRRTA*SSSSNS
Trigger: GCTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGG...GAGTAAGATTCGATACAAAACTAGTGAGCCTGTATGGGAGGAAAACTTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR GCA 90 bp ATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGCAGTATTTAAGGTTCCAGATAGTCAGCTGGATCTaGCCCAGAGGAGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: MLPPLETKLLGQQYLRFQIVSWI*PRGDCP
Trigger: GGGACAATCTCCTCTGGGGCAGATCCAGCTGACTAT...CTGGAACCTTAAATACTGCTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAATGCCGGATAGTCAGCTaGATCTGCCCCAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: AISSLYQGFRMVGNWIPECRIVS*ICPRGD
Trigger: ATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCA...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 72 bp CAGATGATGCACGTGGGGGCACTGTATCTGAACTCATaGGCACCAGCTTTTGTGACTGTAGTAGGGATCATA +
Preference number: 4 (lower is better)
Translates to: QMMHVGALYLNS*APAFVTVVGII
Trigger: TATGATCCCTACTACAGTCACAAAAGCTGGTGCCAATGAGTTCAGATACAGTGCCCCCACGTGCATCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp CTTCTGTCTCCTTTCCACTTAGACTGGAGATGCTACTaGAAGACTCAGATGATGCACGTGGGGGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: LLSPFHLDWRCY*KTQMMHVGALY
Trigger: ATACAGTGCCCCCACGTGCATCATCTGAGTCTTCAAGTAGCATCTCCAGTCTAAGTGGAAAGGAGACAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp TTGATGCCATGTCTGGGGTTCAGTGTTGGGTCTCTGTaGTTGGTATCTCTGGCACTCAATAGCAGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LMPCLGFSVGSL*LVSLALNSSCS
Trigger: ACTACAGCTGCTATTGAGTGCCAGAGATACCAACAACAGAGACCCAACACTGAACCCCAGACATGGCATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp AAGGCAGAAACAAGTCCAGGTATCTGCTTTCCAGCAGGTGCAGCTGACAGAGCTATTGTCCCATGGATCTaGATACTTTTCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: KAETSPGICFPAGAADRAIVPWI*ILFTPA
Trigger: AGCTGGTGTGAAAAGTATTCAGATCCATGGGACAAT...AGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp ATTCCTGGACCTGTGAATCCTGGCTATGAGAGAAACCATATGATATGTTGGACAGGTCCTTGTCAGCTCTaGTGTCTGCCAGCACCTTGT +
Preference number: 4 (lower is better)
Translates to: IPGPVNPGYERNHMICWTGPCQL*CLPAPC
Trigger: ACAAGGTGCTGGCAGACATCAGAGCTGACAAGGACC...TGTCCAACATATCATATGGTTTCTCTCATAGCCAGGATTCACAGGTCCAGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAACTTCCGAGAAGGCAATaGGGTTTCTGCAGGAGTGCA +
Preference number: 4 (lower is better)
Translates to: AISSLYQGFRMVGNWIPELPRRQ*GFCRSA
Trigger: TGCACTCCTGCAGAAACCTCATTGCCTTCTCGGAAG...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp TTCTTGGTGTGGCCTCCCATACCCTGGGATTACAGATGTGAGGTACAACGCCTACACTCTAACTTCAAATaGAGCTTTCCTTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: FLVWPPIPWDYRCEVQRLHSNFK*SFPLGT
Trigger: GGTTCCCAAAGGAAAGCTGCATTTGAAGTTAGAGTG...TAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCAGGCGAGTTCTTCAGATaGCAGAACAACCAGCACTTT +
Preference number: 4 (lower is better)
Translates to: TGFRASEAKIVRRKSELPGEFFR*QNNQHF
Trigger: AAAGTGCTGGTTGTTCTGGCATCTGAAGAACTCGCC...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTGGACACCCTTTGGTATaGGAAACCGCAGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGGHPLV*ETAAEL
Trigger: TAGCTCAGCTGCGGTTTCCCATACCAAAGGGTGTCC...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp AAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCGGACACCCTTTGGTATaGGAAACCGCAGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: KGHFISLSRLQDGRKLDSGHPLV*ETAAEL
Trigger: TAGCTCAGCTGCGGTTTCCCATACCAAAGGGTGTCC...GGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TTCTATGCAGGAAGTGGTTTAATATATTCAGCCTGCTACCAGGTTGCTGACTGGAGGCCATCACTGGCTTaGTCCTTGTCAGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: FYAGSGLIYSACYQVADWRPSLA*SLSALM
Trigger: CATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCT...CCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp ATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGACAAGGATTCTTGCTTTTCAAGATaGAGGACCCGGAGGGCAATC +
Preference number: 4 (lower is better)
Translates to: ISVTKATLSMGLLGKDKDSCFSR*RTRRAI
Trigger: GATTGCCCTCCGGGTCCTCCATCTTGAAAAGCAAGA...ATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp ATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGATTTTCCTCCCTTCTTTaGAGACAGAGGGCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: IPHFCHQGHFVHGLIGQRFSSLL*RQRAVS
Trigger: TGAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAAAA...TCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGCAATGCTTGGGGTaGGTTCCTTGGCTGCGATGT +
Preference number: 4 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGRQCLG*VPWLRC
Trigger: ACATCGCAGCCAAGGAACCCACCCCAAGCATTGCCT...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACTGCCGGATAGTCAGCTaGATCTGCCCCAGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYCRIVS*ICPRGD
Trigger: ATCTCCTCTGGGGCAGATCCAGCTGACTATCCGGCA...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp ATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGACTACGTTATCACCTGTaGCCTTGTCCCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: IPHFCHQGHFVHGLIGQRLRYHL*PCPIFC
Trigger: ACAGAAGATGGGACAAGGCCACAGGTGATAACGTAG...TCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTGATCAGCAGTGCAGATaGAAGGCCATCACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGDQQCR*KAITGL
Trigger: CAAGCCAGTGATGGCCTTTCATCTGCACTGCTGATC...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAAAGTGCACAACCACGATaGGCTTATTCCTTTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AISSLYQGFRMVGNWIPESAQPR*AYSFGS
Trigger: GCTCCCAAAGGAATAAGCTCATCGTGGTTGTGCACT...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGCTGAAGTCGAAGCTCTaGTCAAACACAGGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FWILAEMLPPLETKLLGQLKSKL*SNTGFN
Trigger: ATTGAACCCTGTGTTTGATCAGAGCTTCGACTTCAG...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACATAGTCAGCTGGATCTaGCCCAGAGGAGATTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYIVSWI*PRGDCP
Trigger: GGGACAATCTCCTCTGGGGCAGATCCAGCTGACTAT...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTTTCCTTTGGGAGCTGTaGCGGATAGTCAGCTGGATC +
Preference number: 4 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGFLWEL*RIVSWI
Trigger: GATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAA...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp CTCTTTGATGACTTTGCTCTGGAAGATTTGGTTGCCCACCCGGATAATTCCATATGCTCCACGCACAGCTaGCTCTATGGTTTCTCGAAA +
Preference number: 4 (lower is better)
Translates to: LFDDFALEDLVAHPDNSICSTHS*LYGFSK
Trigger: TTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCA...TATGGAATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAAGTCATCAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
3UTR CAA 72 bp TGTAGTCAGGTCAGAGTTGGTGAATGGCAGTCCATATaGTTGATCCAAGGCACATCCCTCATTTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: CSQVRVGEWQSI*LIQGTSLISVT
Trigger: GGTGACAGAAATGAGGGATGTGCCTTGGATCAACAATATGGACTGCCATTCACCAACTCTGACCTGACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp TCATTCCATTTTGGACTAAGGTTCTCTTTGATGACTTTGCTCTGGAAGATTTGGACTCTCAGGGGCTGCTaGCCCACATCCACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: SFHFGLRFSLMTLLWKIWTLRGC*PTSTFV
Trigger: CACAAAAGTGGATGTGGGTCAGCAGCCCCTGAGAGT...CCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp TCACTAGGAGAGATAGGGAGTAAACCATTTCCTTTTTCACCCCTTGATTCCTGGGTCCCATTTTCAAGTTaGCGTAGCCTTTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLGEIGSKPFPFSPLDSWVPFSS*RSLCLS
Trigger: GCTGAGACAAAGGCTACGTCAACTTGAAAATGGGAC...CCAGGAATCAAGGGGTGAAAAAGGAAATGGTTTACTCCCTATCTCTCCTAGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAAATAAAGGGCCACATGTaGTTTACAGTCTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: LHTAQETHHYTTGEALEEIKGHM*FTVLFS
Trigger: GCTAAATAAGACTGTAAAGCACATGTGGCCCTTTAT...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp ACAACCACGATGAGCTTATTCCTTTGGGAGCTGTGCCGGATAGTCAGCTGGATCATAAAGGGCCACATGTaGTTTACAGTCTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: TTTMSLFLWELCRIVSWIIKGHM*FTVLFS
Trigger: GCTAAATAAGACTGTAAAGCACATGTGGCCCTTTAT...GATCCAGCTGACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATCGTGGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR GCA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGCACTCTAACTTCAAATaGAGCTTTCCTTTGGGAACC +
Preference number: 4 (lower is better)
Translates to: FWILAEMLPPLETKLLGQHSNFK*SFPLGT
Trigger: GGTTCCCAAAGGAAAGCTGCATTTGAAGTTAGAGTG...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGTCTTCATTTTTAAGGTaGTGTTTGGACCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: FWILAEMLPPLETKLLGQSSFLR*CLDPSC
Trigger: GCAACTCGGGTCCAAACAGCACCTTAAAAATGAAGA...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCACTGGTAATAAATACATaGGGACATATGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TGFRASEAKIVRRKSELPLVINT*GHMGQS
Trigger: GCTCTGACCCATATGTCCGCATGTATTTATTACCAG...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTTGCTCCACGCACAGCTaGCTCTATGGTTTCTCGAAA +
Preference number: 4 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGCSTHS*LYGFSK
Trigger: TTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCA...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTTTGCTCTGGAAGATTTaGTTGCCCACCCGGATAATT +
Preference number: 4 (lower is better)
Translates to: HKMRISRKSQALQQLAGTLLWKI*LPTRII
Trigger: AATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAA...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp ATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGACAAGGATTTGCTCTGGAAGATTTaGTTGCCCACCCGGATAATT +
Preference number: 4 (lower is better)
Translates to: ISVTKATLSMGLLGKDKDLLWKI*LPTRII
Trigger: AATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAA...ATCCTTGTCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TTCTTGGTGTGGCCTCCCATACCCTGGGATTACAGATGTGAGGTACAACGCCTACTGGACAAGAGGATTTaGGTTGCTGTTTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: FLVWPPIPWDYRCEVQRLLDKRI*VAVYFL
Trigger: AAGAAAATAAACAGCAACCCAAATCCTCTTGTCCAG...TAGGCGTTGTACCTCACATCTGTAATCCCAGGGTATGGGAGGCCACACCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAAATACATGCGGACATATaGGTCAGAGCCATCTTCCGA +
Preference number: 4 (lower is better)
Translates to: AISSLYQGFRMVGNWIPEIHADI*VRAIFR
Trigger: TCGGAAGATGGCTCTGACCCATATGTCCGCATGTAT...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp ACCTGCCTTTCTCCTGCAACTAAAATGCCACCCTTGAATATTTTATGTGCATATACTGGGTCCAGCCCTTaGCGAGTTCTTCAGATGCCA +
Preference number: 4 (lower is better)
Translates to: TCLSPATKMPPLNILCAYTGSSP*RVLQMP
Trigger: TGGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGT...ATATGCACATAAAATATTCAAGGGTGGCATTTTAGTTGCAGGAGAAAGGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp ACAGGTGGAATGAACCTCAGTGTAAGTCTCTGTGATGGACAACAGAGTGTTTTTCCGTTTGCTTTGGTATaGGAAACCGCAGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: TGGMNLSVSLCDGQQSVFPFALV*ETAAEL
Trigger: TAGCTCAGCTGCGGTTTCCCATACCAAAGCAAACGG...AAAAACACTCTGTTGTCCATCACAGAGACTTACACTGAGGTTCATTCCACCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
3UTR CAA 72 bp TATCTATTTTATATCTTTAGGACACTGGAGTGTGCCTaGATGGCAAGTCAGCCCTCCTCATGCAGCACTCAG +
Preference number: 4 (lower is better)
Translates to: YLFYIFRTLECA*MASQPSSCSTQ
Trigger: CTGAGTGCTGCATGAGGAGGGCTGACTTGCCATCAAGGCACACTCCAGTGTCCTAAAGATATAAAATAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp CTAGCAGTGTTCCAGACGGCTGCCACATACTCAACATaGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCT +
Preference number: 4 (lower is better)
Translates to: LAVFQTAATYST*YCVFKRPFHLS
Trigger: AGAGAGATGAAATGGCCTTTTGAAGACACAGTACAATGTTGAGTATGTGGCAGCCGTCTGGAACACTGCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp ACCTGCCTTTCTCCTGCAACTAAAATGCCACCCTTGAATATTTTATGTGCATATGATCAGCAGTGCAGATaGAAGGCCATCACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TCLSPATKMPPLNILCAYDQQCR*KAITGL
Trigger: CAAGCCAGTGATGGCCTTTCATCTGCACTGCTGATC...ATATGCACATAAAATATTCAAGGGTGGCATTTTAGTTGCAGGAGAAAGGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp TTCTATGCAGGAAGTGGTTTAATATATTCAGCCTGCTACCAGGTTGCTGACTGGTGGCGCCTGGGGTTATaGATGAAGAAAGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: FYAGSGLIYSACYQVADWWRLGL*MKKVKF
Trigger: AAACTTCACTTTCTTCATTCATAACCCCAGGCGCCA...CCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR GCA 90 bp ATTCCTGGACCTGTGAATCCTGGCTATGAGAGAAACCATATGATATGTTGGACATCTGGAGGCCTTTCTTaGTTTTCAAGATGGAGGACC +
Preference number: 4 (lower is better)
Translates to: IPGPVNPGYERNHMICWTSGGLS*FSRWRT
Trigger: GGTCCTCCATCTTGAAAAGCAAGAAAGGCCTCCAGA...TGTCCAACATATCATATGGTTTCTCTCATAGCCAGGATTCACAGGTCCAGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp GAAGGTGTCTGTCCTGTGTGTGGACTTATGGCCAGGTTCTCCCATCAAGAGCAACACTTCATTCCATTTTaGACTAAGGTTCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: EGVCPVCGLMARFSHQEQHFIPF*TKVLFD
Trigger: ATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTG...TTGCTCTTGATGGGAGAACCTGGCCATAAGTCCACACACAGGACAGACACCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp ACCTGCCTTTCTCCTGCAACTAAAATGCCACCCTTGAATATTTTATGTGCATATAGGCCATCACTGGCTTaGTCCTTGTCAGCTCTGATG +
Preference number: 4 (lower is better)
Translates to: TCLSPATKMPPLNILCAYRPSLA*SLSALM
Trigger: CATCAGAGCTGACAAGGACCAAGCCAGTGATGGCCT...ATATGCACATAAAATATTCAAGGGTGGCATTTTAGTTGCAGGAGAAAGGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACTTTTCCTCCCTTCTTTaGAGACAGAGGGCCGTTTCA +
Preference number: 4 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYFSSLL*RQRAVS
Trigger: TGAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAAAA...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp GCAATCTTCATTTTTAAGGTGCTGTTTGGACCCGAGTaGCTAAGCTGGAACCGCTGGTTTATAGTCATGTTG +
Preference number: 4 (lower is better)
Translates to: AIFIFKVLFGPE*LSWNRWFIVML
Trigger: CAACATGACTATAAACCAGCGGTTCCAGCTTAGCAACTCGGGTCCAAACAGCACCTTAAAAATGAAGATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp GATGGTGATTTGGCAGACACTTTATATATAGGAAAGGCAAATTCATATCCAGAAACTCTCAGGGGCTGCTaGCCCACATCCACTTTTGTG +
Preference number: 4 (lower is better)
Translates to: DGDLADTLYIGKANSYPETLRGC*PTSTFV
Trigger: CACAAAAGTGGATGTGGGTCAGCAGCCCCTGAGAGT...TTCTGGATATGAATTTGCCTTTCCTATATATAAAGTGTCTGCCAAATCACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp TGTCTGGATCTTCATCAAACAGTTCAATCTCCAATTCTTGTCCAGGGTGTTCATATCCTTAGGACACCCTaGAGAGAGGAACAAACCACT +
Preference number: 4 (lower is better)
Translates to: CLDLHQTVQSPILVQGVHILRTP*REEQTT
Trigger: AGTGGTTTGTTCCTCTCTTCAGGGTGTCCTAAGGAT...ATGAACACCCTGGACAAGAATTGGAGATTGAACTGTTTGATGAAGATCCAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
CDS-3UTR GCA 90 bp ATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGAATAAAGGGCCACATGTaGTTTACAGTCTTATTTAGC +
Preference number: 4 (lower is better)
Translates to: IPHFCHQGHFVHGLIGQRIKGHM*FTVLFS
Trigger: GCTAAATAAGACTGTAAAGCACATGTGGCCCTTTAT...TCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TCATTCCATTTTGGACTAAGGTTCTCTTTGATGACTTTGCTCTGGAAGATTTGGCCGTTTGCTTTGGTATaGGAAACCGCAGCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: SFHFGLRFSLMTLLWKIWPFALV*ETAAEL
Trigger: TAGCTCAGCTGCGGTTTCCCATACCAAAGCAAACGG...CCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
3UTR CAA 72 bp CGAAGCTCTGATCAAACACAGGGTTCAATGTCTTCTTaGATACATGTGTTTTCCTTCTTCCTGAGCGTCTCT +
Preference number: 4 (lower is better)
Translates to: RSSDQTQGSMSS*IHVFSFFLSVS
Trigger: AGAGACGCTCAGGAAGAAGGAAAACACATGTATCAAAGAAGACATTGAACCCTGTGTTTGATCAGAGCTTCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp TCATTCCATTTTGGACTAAGGTTCTCTTTGATGACTTTGCTCTGGAAGATTTGGATCCTTAGGACACCCTaGAGAGAGGAACAAACCACT +
Preference number: 4 (lower is better)
Translates to: SFHFGLRFSLMTLLWKIWILRTP*REEQTT
Trigger: AGTGGTTTGTTCCTCTCTTCAGGGTGTCCTAAGGAT...CCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
CDS-3UTR GCA 90 bp ACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTTAGACTGGAGCTGGTAATAAATACATaGGGACATATGGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: TKWTSITRPSVSFPLRLELVINT*GHMGQS
Trigger: GCTCTGACCCATATGTCCGCATGTATTTATTACCAG...CTCCAGTCTAAGTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp AATATAATGTATGTTTCTTTTTCCCAAGACAGAGTTTaGAGGTGTAGCCCAGGCTGGCCTTTAACACTTGGG +
Preference number: 4 (lower is better)
Translates to: NIMYVSFSQDRV*RCSPGWPLTLG
Trigger: CCCAAGTGTTAAAGGCCAGCCTGGGCTACACCTCAAAACTCTGTCTTGGGAAAAAGAAACATACATTATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp TCATTCCATTTTGGACTAAGGTTCTCTTTGATGACTTaGCTCTGGAAGATTTGGTTGCCCACCCGGATAATT +
Preference number: 4 (lower is better)
Translates to: SFHFGLRFSLMT*LWKIWLPTRII
Trigger: AATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
3UTR CAA 72 bp TCATACACTTCATTCCATTTTGGACTAAGGTTCTCTTaGATGACTTTGCTCTGGAAGATTTGGTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: SYTSFHFGLRFS*MTLLWKIWLPT
Trigger: GGTGGGCAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTGTATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
CDS-3UTR TCA 90 bp TGTCTGGATCTTCATCAAACAGTTCAATCTCCAATTCTTGTCCAGGGTGTTCATATTGTCCCATGGATCTaGATACTTTTCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: CLDLHQTVQSPILVQGVHIVPWI*ILFTPA
Trigger: AGCTGGTGTGAAAAGTATTCAGATCCATGGGACAAT...ATGAACACCCTGGACAAGAATTGGAGATTGAACTGTTTGATGAAGATCCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR TCA 90 bp GGCCAGCAGTATTTAAGGTTCCAGAAACAGGAAGCAAAAATTTTCCTAGTGAGTATTGTCCCATGGATCTaGATACTTTTCACACCAGCT +
Preference number: 4 (lower is better)
Translates to: GQQYLRFQKQEAKIFLVSIVPWI*ILFTPA
Trigger: AGCTGGTGTGAAAAGTATTCAGATCCATGGGACAAT...ACTCACTAGGAAAATTTTTGCTTCCTGTTTCTGGAACCTTAAATACTGCTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp ACCTGCCTTTCTCCTGCAACTAAAATGCCACCCTTGAATATTTTATGTGCATATTGGCGCCTGGGGTTATaGATGAAGAAAGTGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TCLSPATKMPPLNILCAYWRLGL*MKKVKF
Trigger: AAACTTCACTTTCTTCATTCATAACCCCAGGCGCCA...ATATGCACATAAAATATTCAAGGGTGGCATTTTAGTTGCAGGAGAAAGGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR TCA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGGTCCCATTTTCAAGTTaGCGTAGCCTTTGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: HGQATSFNITCLSPATKMVPFSS*RSLCLS
Trigger: GCTGAGACAAAGGCTACGTCAACTTGAAAATGGGAC...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp TCAGAACTACAACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACTCTTCATTTTTAAGGTaGTGTTTGGACCCGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SELQLSGLVLLDLLSPFHSSFLR*CLDPSC
Trigger: GCAACTCGGGTCCAAACAGCACCTTAAAAATGAAGA...GTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR GCA 90 bp TGTGCATATATGTTCATGTGTGTACCTACACAAACTTTCTCACAATCCTACTCATCTGGAGGCCTTTCTTaGTTTTCAAGATGGAGGACC +
Preference number: 4 (lower is better)
Translates to: CAYMFMCVPTQTFSQSYSSGGLS*FSRWRT
Trigger: GGTCCTCCATCTTGAAAAGCAAGAAAGGCCTCCAGA...TGAGTAGGATTGTGAGAAAGTTTGTGTAGGTACACACATGAACATATATGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp TTCTATGCAGGAAGTGGTTTAATATATTCAGCCTGCTACCAGGTTGCTGACTGGGAAATCATCCTTGTCTaGATCTTCATCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: FYAGSGLIYSACYQVADWEIILV*IFIKQF
Trigger: GAACTGTTTGATGAAGATCCAGACAAGGATGATTTC...CCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR TCA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGCTGAAGTCGAAGCTCTaGTCAAACACAGGGTTCAAT +
Preference number: 4 (lower is better)
Translates to: HGQATSFNITCLSPATKMLKSKL*SNTGFN
Trigger: ATTGAACCCTGTGTTTGATCAGAGCTTCGACTTCAG...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CCA 90 bp AAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCCACTTCATTCCATTTTaGACTAAGGTTCTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: KGHFISLSRLQDGRKLDSHFIPF*TKVLFD
Trigger: ATCAAAGAGAACCTTAGTCCAAAATGGAATGAAGTG...GGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
3UTR CAA 72 bp TTTGATACATGTGTTTTCCTTCTTCCTGAGCGTCTCTaGTCTGGTAATAAATACATGCGGACATATGGGTCA +
Preference number: 4 (lower is better)
Translates to: FDTCVFLLPERL*SGNKYMRTYGS
Trigger: TGACCCATATGTCCGCATGTATTTATTACCAGACAAGAGACGCTCAGGAAGAAGGAAAACACATGTATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR CCA 90 bp TCAGAACTACAACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACGAAATCATCCTTGTCTaGATCTTCATCAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: SELQLSGLVLLDLLSPFHEIILV*IFIKQF
Trigger: GAACTGTTTGATGAAGATCCAGACAAGGATGATTTC...GTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
3UTR CAA 72 bp TCCAGAAACAGTATCCACTCCAGTAAGAGCAAAGCATaGTTCTTTCTATGCAGGAAGTGGTTTAATATATTC +
Preference number: 4 (lower is better)
Translates to: SRNSIHSSKSKA*FFLCRKWFNIF
Trigger: GAATATATTAAACCACTTCCTGCATAGAAAGAACAATGCTTTGCTCTTACTGGAGTGGATACTGTTTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CCA 90 bp TATAGGAAAGGCAAATTCATATCCAGAAACAGTATCCACTCCAGTAAGAGCAAACTGGACAAGAGGATTTaGGTTGCTGTTTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: YRKGKFISRNSIHSSKSKLDKRI*VAVYFL
Trigger: AAGAAAATAAACAGCAACCCAAATCCTCTTGTCCAG...TTTGCTCTTACTGGAGTGGATACTGTTTCTGGATATGAATTTGCCTTTCCTATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS TCA 90 bp CCTCGTCCTCCAACAGCGCCAGCGCGCGGCACAGGCGGCTGGCCTTaGGGCCGCGGCTCCGGCGGCACCAGGCGAGCAGCCCGAGCGCCA +
Preference number: 5 (lower is better)
Translates to: PRPPTAPARGTGGWP*GRGSGGTRRAARAP
Trigger: TGGCGCTCGGGCTGCTCGCCTGGTGCCGCCGGAGCCGCGGCCTCAAGGCCAGCCGCCTGTGCCGCGCGCTGGCGCTGTTGGAGGACGAGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS GCA 90 bp CCCAGGGCGTACACCGGCAGCAGCAGCGCGAAGCTGCGCGCCAGCTaGCCCAGCAGCCCCGGCAAGTCCACACTCAGAGCGCTGCCCGGG +
Preference number: 5 (lower is better)
Translates to: PRAYTGSSSAKLRAS*PSSPGKSTLRALPG
Trigger: CCCGGGCAGCGCTCTGAGTGTGGACTTGCCGGGGCTGCTGGGGCAGCTGGCGCGCAGCTTCGCGCTGCTGCTGCCGGTGTACGCCCTGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS GCA 90 bp ACCCAGGCGGGCAGGTCGCAGGCGCGCACTCCCAGGCGCACAGCTTaGTCCTCGTCCTCCAACAGCGCCAGCGCGCGGCACAGGCGGCTG +
Preference number: 5 (lower is better)
Translates to: TQAGRSQARTPRRTA*SSSSNSASARHRRL
Trigger: CAGCCGCCTGTGCCGCGCGCTGGCGCTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGGAGTGCGCGCCTGCGACCTGCCCGCCTGGGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS TCA 90 bp TCCGGCGGCACCAGGCGAGCAGCCCGAGCGCCAGCAGCACCCAACTaGAGCTCAGCCCCAGGTAGCCCAGGGCGTACACCGGCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: SGGTRRAARAPAAPN*SSAPGSPGRTPAAA
Trigger: TGCTGCTGCCGGTGTACGCCCTGGGCTACCTGGGGCTGAGCTTCAGTTGGGTGCTGCTGGCGCTCGGGCTGCTCGCCTGGTGCCGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp GCCACATCCAATGTTCTCCTTTGCACCTCAGGCAGCGAAACACTGAAGTCGAAGTCCCAGGCGCACAGCTaGCTCCTCGTCCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: ATSNVLLCTSGSETLKSKSQAHS*LLVLQQ
Trigger: CTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGGA...CTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR CAA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTTCCCAGGCGCACAGCTaGCTCCTCGTCCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: HKMRISRKSQALQQLAGTSQAHS*LLVLQQ
Trigger: CTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGGA...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR CAA 90 bp TTTAGGACACTGGAGTGTGCCTTGATGGCAAGTCAGCCCTCCTCATGCAGCACTCCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: FRTLECALMASQPSSCSTPQLSY*NFTDKR
Trigger: CCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGG...AGTGCTGCATGAGGAGGGCTGACTTGCCATCAAGGCACACTCCAGTGTCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAATCCTTAGGACACCCTTaGGTATGGGAAACCGCAGCT +
Preference number: 5 (lower is better)
Translates to: LHTAQETHHYTTGEALEESLGHP*VWETAA
Trigger: AGCTGCGGTTTCCCATACCAAAGGGTGTCCTAAGGA...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp AAGGCAGAAACAAGTCCAGGTATCTGCTTTCCAGCAGGTGCAGCTGACAGAGCTGCACCTTGTCAAGGTTaGCAGCATCAGGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: KAETSPGICFPAGAADRAAPCQG*QHQASV
Trigger: CACTGATGCCTGATGCTGCAAACCTTGACAAGGTGC...AGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS GCA 90 bp ACCCACATCCACTTTTGTGAAGCTGAAGGTGCTGAGGTGAGCATTTaGTCCACGCACAGCTGGCTCTATGGTTTCTCGAAAGAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: THIHFCEAEGAEVSI*STHSWLYGFSKELL
Trigger: GAGAAGCTCTTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCAAATGCTCACCTCAGCACCTTCAGCTTCACAAAAGTGGATGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTTCCCAGGCGCACAGCTaGCTCCTCGTCCTCCAACAG +
Preference number: 5 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGSQAHS*LLVLQQ
Trigger: CTGTTGGAGGACGAGGAGCAAGCTGTGCGCCTGGGA...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp CCTTTGCACCTCAGGCAGCGAAACACTGAAGTCGAAGCTCTGATCAAACACAGGCCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: PLHLRQRNTEVEALIKHRPQLSY*NFTDKR
Trigger: CCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGG...CCTGTGTTTGATCAGAGCTTCGACTTCAGTGTTTCGCTGCCTGAGGTGCAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR CAA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAAATGTCTGCCAGCACCTaGTCAAGGTTTGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: LHTAQETHHYTTGEALEEMSAST*SRFAAS
Trigger: TGATGCTGCAAACCTTGACAAGGTGCTGGCAGACAT...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp CTCCACACAGCACAGGAAACACATCACTACACCACTGGTGAAGCACTGGAGGAAATTTTCCTCCCTTCTTaGGAGACAGAGGGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: LHTAQETHHYTTGEALEEIFLPS*ETEGRF
Trigger: GAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAAAAT...TTCCTCCAGTGCTTCACCAGTGGTGTAGTGATGTGTTTCCTGTGCTGTGTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp TCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGGATCTTTTGTCACGTATGGATGAGCTTATTCCTTaGGGAGCTGTGCCGGATAGT +
Preference number: 5 (lower is better)
Translates to: SQALQQLAGTAQDLLSRMDELIP*GAVPDS
Trigger: ACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATC...CATACGTGACAAAAGATCCTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp AAGGCAGAAACAAGTCCAGGTATCTGCTTTCCAGCAGGTGCAGCTGACAGAGCTATCCAATGTTCTCCTTaGCACCTCAGGCAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: KAETSPGICFPAGAADRAIQCSP*HLRQRN
Trigger: GTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGAT...AGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTCACTGGGTCCAGCCCTaGGCGAGTTCTTCAGATGCC +
Preference number: 5 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGHWVQP*ASSSDA
Trigger: GGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGTG...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAACACTGGGTCCAGCCCTaGGCGAGTTCTTCAGATGCC +
Preference number: 5 (lower is better)
Translates to: AISSLYQGFRMVGNWIPEHWVQP*ASSSDA
Trigger: GGCATCTGAAGAACTCGCCAAGGGCTGGACCCAGTG...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp AGCCACCACTGTTCTTCACAGCCACATCCAATGTTCTCCTTTGCACCTCAGGCACAAACCACTGACCGTTaGCTTTGGTATGGGAAACCG +
Preference number: 5 (lower is better)
Translates to: SHHCSSQPHPMFSFAPQAQTTDR*LWYGKP
Trigger: CGGTTTCCCATACCAAAGCAAACGGTCAGTGGTTTG...TGCCTGAGGTGCAAAGGAGAACATTGGATGTGGCTGTGAAGAACAGTGGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220720.2
CDS-3UTR CAA 90 bp AGAGCCAGAGGAGCTAGAGTTTTAGGCAGCTGTGAGCCATCTGACAAAGGTGTTCCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: RARGARVLGSCEPSDKGVPQLSY*NFTDKR
Trigger: CCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGG...AACACCTTTGTCAGATGGCTCACAGCTGCCTAAAACTCTAGCTCCTCTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
CDS-3UTR CAA 90 bp ATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCGCAGTTTGCTCTGGAAGATTaGGTTGCCCACCCGGATAAT +
Preference number: 5 (lower is better)
Translates to: MRISRKSQALQQLAGTAQFALED*VAHPDN
Trigger: ATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAA...CTGCGCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp ATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGAGCACCTTGTCAAGGTTaGCAGCATCAGGCATCAGTG +
Preference number: 5 (lower is better)
Translates to: IPHFCHQGHFVHGLIGQRAPCQG*QHQASV
Trigger: CACTGATGCCTGATGCTGCAAACCTTGACAAGGTGC...TCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TCACTAGGAGAGATAGGGAGTAAACCATTTCCTTTTTCACCCCTTGATTCCTGGCTGTTTGGACCCGAGTaGCTAAGCTGGAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: SLGEIGSKPFPFSPLDSWLFGPE*LSWNRW
Trigger: CCAGCGGTTCCAGCTTAGCAACTCGGGTCCAAACAG...CCAGGAATCAAGGGGTGAAAAAGGAAATGGTTTACTCCCTATCTCTCCTAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAACTGCCCCAGAGGAGATaGTCCCAGGGTTGTCCCATT +
Preference number: 5 (lower is better)
Translates to: AISSLYQGFRMVGNWIPELPQRR*SQGCPI
Trigger: AATGGGACAACCCTGGGACAATCTCCTCTGGGGCAG...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp AGCTTCCAGGTCACTGAACATGTTTTGGATCCTGGCAGAAATGCTCCCACCTCTGATGAGCTTATTCCTTaGGGAGCTGTGCCGGATAGT +
Preference number: 5 (lower is better)
Translates to: SFQVTEHVLDPGRNAPTSDELIP*GAVPDS
Trigger: ACTATCCGGCACAGCTCCCAAAGGAATAAGCTCATC...AGAGGTGGGAGCATTTCTGCCAGGATCCAAAACATGTTCAGTGACCTGGAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp ATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGAAAATGCAGCTTTCCTTaGGGAACCTCGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: IPHFCHQGHFVHGLIGQRKCSFP*GTSSRV
Trigger: CACTCTGGACGAGGTTCCCAAAGGAAAGCTGCATTT...TCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACCTGTTTGGACCCGAGTaGCTAAGCTGGAACCGCTGG +
Preference number: 5 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYLFGPE*LSWNRW
Trigger: CCAGCGGTTCCAGCTTAGCAACTCGGGTCCAAACAG...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGGTCTGGAGGCCTTTCTaGCTTTTCAAGATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: FWILAEMLPPLETKLLGQVWRPF*LFKMED
Trigger: GTCCTCCATCTTGAAAAGCAAGAAAGGCCTCCAGAC...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TTTTGGATCCTGGCAGAAATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGATTTTCCTCCCTTCTTaGGAGACAGAGGGCCGTTTC +
Preference number: 5 (lower is better)
Translates to: FWILAEMLPPLETKLLGQIFLPS*ETEGRF
Trigger: GAAACGGCCCTCTGTCTCCAAAGAAGGGAGGAAAAT...CTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCATTTCTGCCAGGATCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCAATCCAATGTTCTCCTTaGCACCTCAGGCAGCGAAAC +
Preference number: 5 (lower is better)
Translates to: TGFRASEAKIVRRKSELPIQCSP*HLRQRN
Trigger: GTTTCGCTGCCTGAGGTGCAAAGGAGAACATTGGAT...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS CCA 90 bp TGTGAAGCTGAAGGTGCTGAGGTGAGCATTTGCTCCACGCACAGCTaGCTCTATGGTTTCTCGAAAGAGCTTCTCGATAAACTGACAAAT +
Preference number: 5 (lower is better)
Translates to: CEAEGAEVSICSTHS*LYGFSKELLDKLTN
Trigger: ATTTGTCAGTTTATCGAGAAGCTCTTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCAAATGCTCACCTCAGCACCTTCAGCTTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp CAGGATCTTTTGTCACGTATGAGGGGAAGCTCGGGAAGGTGTCTGTCCTGTGTGTTCTCTTTGATGACTTaGCTCTGGAAGATTTGGTTG +
Preference number: 5 (lower is better)
Translates to: QDLLSRMRGSSGRCLSCVFSLMT*LWKIWL
Trigger: CAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAA...CACACAGGACAGACACCTTCCCGAGCTTCCCCTCATACGTGACAAAAGATCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp AAGGCAGAAACAAGTCCAGGTATCTGCTTTCCAGCAGGTGCAGCTGACAGAGCTTCTGGACAAGAGGATTaGGGTTGCTGTTTATTTTCT +
Preference number: 5 (lower is better)
Translates to: KAETSPGICFPAGAADRASGQED*GCCLFS
Trigger: AGAAAATAAACAGCAACCCAAATCCTCTTGTCCAGA...AGCTCTGTCAGCTGCACCTGCTGGAAAGCAGATACCTGGACTTGTTTCTGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTGTCTGGAGGCCTTTCTaGCTTTTCAAGATGGAGGAC +
Preference number: 5 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGVWRPF*LFKMED
Trigger: GTCCTCCATCTTGAAAAGCAAGAAAGGCCTCCAGAC...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACCCAGTATCACCCGCATaGTCCCATGGATCTGAATAC +
Preference number: 5 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYPVSPA*SHGSEY
Trigger: GTATTCAGATCCATGGGACAATGCGGGTGATACTGG...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR CAA 90 bp GGGGGCACTGTATCTGAACTCATTGGCACCAGCTTTTGTGACTGTAGTAGGGATCCTAAGAAATCATCCTaGTCTGGATCTTCATCAAAC +
Preference number: 5 (lower is better)
Translates to: GGTVSELIGTSFCDCSRDPKKSS*SGSSSN
Trigger: GTTTGATGAAGATCCAGACAAGGATGATTTCTTAGG...ATCCCTACTACAGTCACAAAAGCTGGTGCCAATGAGTTCAGATACAGTGCCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp CATGGTCAAGCAACTAGTTTTAATATAACCTGCCTTTCTCCTGCAACTAAAATGCTGCCCCAGAGGAGATaGTCCCAGGGTTGTCCCATT +
Preference number: 5 (lower is better)
Translates to: HGQATSFNITCLSPATKMLPQRR*SQGCPI
Trigger: AATGGGACAACCCTGGGACAATCTCCTCTGGGGCAG...CATTTTAGTTGCAGGAGAAAGGCAGGTTATATTAAAACTAGTTGCTTGACCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp CACAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTAGAACAACCAGCACTTaGCCAAGAAGCCCTTTATCT +
Preference number: 5 (lower is better)
Translates to: HKMRISRKSQALQQLAGTRTTST*PRSPLS
Trigger: AGATAAAGGGCTTCTTGGCAAAGTGCTGGTTGTTCT...AGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp TGTACTGTGTCTTCAAAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTTTTGCTCTGGAAGATTaGGTTGCCCACCCGGATAAT +
Preference number: 5 (lower is better)
Translates to: CTVSSKGHFISLSRLQDGFALED*VAHPDN
Trigger: ATTATCCGGGTGGGCAACCAAATCTTCCAGAGCAAA...ACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTTTGAAGACACAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TCAGAACTACAACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACAAATGCAGCTTTCCTTaGGGAACCTCGTCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: SELQLSGLVLLDLLSPFHKCSFP*GTSSRV
Trigger: CACTCTGGACGAGGTTCCCAAAGGAAAGCTGCATTT...GTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp ATTTGTTTCTTAGCTTACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGATGTCTGCCAGCACCTaGTCAAGGTTTGCAGCATCA +
Preference number: 5 (lower is better)
Translates to: ICFLAYRLQGIRSQNSQKMSAST*SRFAAS
Trigger: TGATGCTGCAAACCTTGACAAGGTGCTGGCAGACAT...CTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGTAAGCTAAGAAACAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TCACTAGGAGAGATAGGGAGTAAACCATTTCCTTTTTCACCCCTTGATTCCTGGCTGACGGAAGGTTCCTaGCAGAATCCAAATACAAGA +
Preference number: 5 (lower is better)
Translates to: SLGEIGSKPFPFSPLDSWLTEGS*QNPNTR
Trigger: TCTTGTATTTGGATTCTGCAAGGAACCTTCCGTCAG...CCAGGAATCAAGGGGTGAAAAAGGAAATGGTTTACTCCCTATCTCTCCTAGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp ACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGAAGTCTGAGCTTCCATCTGGACAAGAGGATTaGGGTTGCTGTTTATTTTCT +
Preference number: 5 (lower is better)
Translates to: TGFRASEAKIVRRKSELPSGQED*GCCLFS
Trigger: AGAAAATAAACAGCAACCCAAATCCTCTTGTCCAGA...TGGAAGCTCAGACTTCCTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp AAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAACAACCAGCACTTaGCCAAGAAGCCCTTTATCT +
Preference number: 5 (lower is better)
Translates to: KGHFISLSRLQDGRKLDSRTTST*PRSPLS
Trigger: AGATAAAGGGCTTCTTGGCAAAGTGCTGGTTGTTCT...GGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS TCA 90 bp CGCACAGCTGGCTCTATGGTTTCTCGAAAGAGCTTCTCGATAAACTaGCAAATAAAGGGCCACATGTGCTTTACAGTCTTATTTAGCCAT +
Preference number: 5 (lower is better)
Translates to: RTAGSMVSRKSFSIN*QIKGHMCFTVLFSH
Trigger: ATGGCTAAATAAGACTGTAAAGCACATGTGGCCCTTTATTTGTCAGTTTATCGAGAAGCTCTTTCGAGAAACCATAGAGCCAGCTGTGCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TATAGGAAAGGCAAATTCATATCCAGAAACAGTATCCACTCCAGTAAGAGCAAATCCTTAGGACACCCTTaGGTATGGGAAACCGCAGCT +
Preference number: 5 (lower is better)
Translates to: YRKGKFISRNSIHSSKSKSLGHP*VWETAA
Trigger: AGCTGCGGTTTCCCATACCAAAGGGTGTCCTAAGGA...TTTGCTCTTACTGGAGTGGATACTGTTTCTGGATATGAATTTGCCTTTCCTATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp CAAAATGAGGATATCCAGGAAATCTCAAGCCTTACAGCAGCTTGCTGGCACTGCTTTGCCCTGAAGATCTaGAGCTTCAATAAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: QNEDIQEISSLTAACWHCFALKI*SFNKVN
Trigger: ATTCACTTTATTGAAGCTCAAGATCTTCAGGGCAAA...GCAGTGCCAGCAAGCTGCTGTAAGGCTTGAGATTTCCTGGATATCCTCATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp ATCCCTCATTTCTGTCACCAAGGCCACTTTGTCCATGGGCTTATTGGGCAAAGATTTGCCCTGAAGATCTaGAGCTTCAATAAAGTGAAT +
Preference number: 5 (lower is better)
Translates to: IPHFCHQGHFVHGLIGQRFALKI*SFNKVN
Trigger: ATTCACTTTATTGAAGCTCAAGATCTTCAGGGCAAA...TCTTTGCCCAATAAGCCCATGGACAAAGTGGCCTTGGTGACAGAAATGAGGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp AAAGGCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCTTCAATCTCCAATTCTaGTCCAGGGTGTTCATACAC +
Preference number: 5 (lower is better)
Translates to: KGHFISLSRLQDGRKLDSFNLQF*SRVFIH
Trigger: GTGTATGAACACCCTGGACAAGAATTGGAGATTGAA...GGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp ATGCTCCCACCTCTGGAAACAAAACTTCTAGGCCAGCAGTATTTAAGGTTCCAGACAAGAGGATTTGGGTaGCTGTTTATTTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: MLPPLETKLLGQQYLRFQTRGFG*LFIFFP
Trigger: AGGGAAGAAAATAAACAGCAACCCAAATCCTCTTGT...CTGGAACCTTAAATACTGCTGGCCTAGAAGTTTTGTTTCCAGAGGTGGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TGTGCATATATGTTCATGTGTGTACCTACACAAACTTTCTCACAATCCTACTCACCAGTATCACCCGCATaGTCCCATGGATCTGAATAC +
Preference number: 5 (lower is better)
Translates to: CAYMFMCVPTQTFSQSYSPVSPA*SHGSEY
Trigger: GTATTCAGATCCATGGGACAATGCGGGTGATACTGG...TGAGTAGGATTGTGAGAAAGTTTGTGTAGGTACACACATGAACATATATGCACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
CDS-3UTR CAA 90 bp TTCTATGCAGGAAGTGGTTTAATATATTCAGCCTGCTACCAGGTTGCTGACTGGTTCTCTTTGATGACTTaGCTCTGGAAGATTTGGTTG +
Preference number: 5 (lower is better)
Translates to: FYAGSGLIYSACYQVADWFSLMT*LWKIWL
Trigger: CAACCAAATCTTCCAGAGCAAAGTCATCAAAGAGAA...CCAGTCAGCAACCTGGTAGCAGGCTGAATATATTAAACCACTTCCTGCATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp TCTTTAGCTCAGCACCCTTTGTTACTATGCATCCATCCCATTTCACCTCTTTACTTCAATCTCCAATTCTaGTCCAGGGTGTTCATACAC +
Preference number: 5 (lower is better)
Translates to: SLAQHPLLLCIHPISPLYFNLQF*SRVFIH
Trigger: GTGTATGAACACCCTGGACAAGAATTGGAGATTGAA...GTAAAGAGGTGAAATGGGATGGATGCATAGTAACAAAGGGTGCTGAGCTAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp GCCATTTCATCTCTCTATCAAGGCTTCAGGATGGTAGGAAACTGGATTCCAGAACCTAAGAAATCATCCTaGTCTGGATCTTCATCAAAC +
Preference number: 5 (lower is better)
Translates to: AISSLYQGFRMVGNWIPEPKKSS*SGSSSN
Trigger: GTTTGATGAAGATCCAGACAAGGATGATTTCTTAGG...TTCTGGAATCCAGTTTCCTACCATCCTGAAGCCTTGATAGAGAGATGAAATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTACAAGAGGATTTGGGTaGCTGTTTATTTTCTTCCCT +
Preference number: 5 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGTRGFG*LFIFFP
Trigger: AGGGAAGAAAATAAACAGCAACCCAAATCCTCTTGT...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp ACTGAAAAGCTTAACATTAAGTCCACATTGACAACCTGGAAGGAAGTAGTTTCACAAACCACTGACCGTTaGCTTTGGTATGGGAAACCG +
Preference number: 5 (lower is better)
Translates to: TEKLNIKSTLTTWKEVVSQTTDR*LWYGKP
Trigger: CGGTTTCCCATACCAAAGCAAACGGTCAGTGGTTTG...TGAAACTACTTCCTTCCAGGTTGTCAATGTGGACTTAATGTTAAGCTTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000220804.2
CDS-3UTR CAA 90 bp GATGGTGATTTGGCAGACACTTTATATATAGGAAAGGCAAATTCATATCCAGAACCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: DGDLADTLYIGKANSYPEPQLSY*NFTDKR
Trigger: CCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGG...TTCTGGATATGAATTTGCCTTTCCTATATATAAAGTGTCTGCCAAATCACCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp ACCTGCCTTTCTCCTGCAACTAAAATGCCACCCTTGAATATTTTATGTGCATATCTGACGGAAGGTTCCTaGCAGAATCCAAATACAAGA +
Preference number: 5 (lower is better)
Translates to: TCLSPATKMPPLNILCAYLTEGS*QNPNTR
Trigger: TCTTGTATTTGGATTCTGCAAGGAACCTTCCGTCAG...ATATGCACATAAAATATTCAAGGGTGGCATTTTAGTTGCAGGAGAAAGGCAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp TCAGAACTACAACTAAGTGGACTAGTATTACTAGACCTTCTGTCTCCTTTCCACCTTCCTGAGCGTCTCTaGTCTGGTAATAAATACATG +
Preference number: 5 (lower is better)
Translates to: SELQLSGLVLLDLLSPFHLPERL*SGNKYM
Trigger: CATGTATTTATTACCAGACAAGAGACGCTCAGGAAG...GTGGAAAGGAGACAGAAGGTCTAGTAATACTAGTCCACTTAGTTGTAGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp GGCCAGCAGTATTTAAGGTTCCAGAAACAGGAAGCAAAAATTTTCCTAGTGAGTCTTCCTGAGCGTCTCTaGTCTGGTAATAAATACATG +
Preference number: 5 (lower is better)
Translates to: GQQYLRFQKQEAKIFLVSLPERL*SGNKYM
Trigger: CATGTATTTATTACCAGACAAGAGACGCTCAGGAAG...ACTCACTAGGAAAATTTTTGCTTCCTGTTTCTGGAACCTTAAATACTGCTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS-3UTR CAA 90 bp GAGAGTGCAAAAGGAGCACTCGATATTCATCACAGGCACTTTGGTATGTTTGGTGGTTCAATGTCTTCTTaGATACATGTGTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ESAKGALDIHHRHFGMFGGSMSS*IHVFSF
Trigger: GAAGGAAAACACATGTATCAAAGAAGACATTGAACC...ACCAAACATACCAAAGTGCCTGTGATGAATATCGAGTGCTCCTTTTGCACTCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000100986.4
CDS-3UTR CAA 90 bp ATTTGTTTCTTAGCTTACAGGCTTCAGGGCATCAGAAGCCAAAATAGTCAGAAGGGTTCAATGTCTTCTTaGATACATGTGTTTTCCTTC +
Preference number: 5 (lower is better)
Translates to: ICFLAYRLQGIRSQNSQKGSMSS*IHVFSF
Trigger: GAAGGAAAACACATGTATCAAAGAAGACATTGAACC...CTTCTGACTATTTTGGCTTCTGATGCCCTGAAGCCTGTAAGCTAAGAAACAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000220816.2
CDS CAA 90 bp TCCTCGTCCTCCAACAGCGCCAGCGCGCGGCACAGGCGGCTGGCCTaGAGGCCGCGGCTCCGGCGGCACCAGGCGAGCAGCCCGAGCGCC +
Preference number: 6 (lower is better)
Translates to: SSSSNSASARHRRLA*RPRLRRHQASSPSA
Trigger: GGCGCTCGGGCTGCTCGCCTGGTGCCGCCGGAGCCGCGGCCTCAAGGCCAGCCGCCTGTGCCGCGCGCTGGCGCTGTTGGAGGACGAGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS GCA 72 bp TACACCGGCAGCAGCAGCGCGAAGCTGCGCGCCAGCTaGCCCAGCAGCCCCGGCAAGTCCACACTCAGAGCG +
Preference number: 6 (lower is better)
Translates to: YTGSSSAKLRAS*PSSPGKSTLRA
Trigger: CGCTCTGAGTGTGGACTTGCCGGGGCTGCTGGGGCAGCTGGCGCGCAGCTTCGCGCTGCTGCTGCCGGTGTA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS TCA 72 bp ACCAGGCGAGCAGCCCGAGCGCCAGCAGCACCCAACTaGAGCTCAGCCCCAGGTAGCCCAGGGCGTACACCG +
Preference number: 6 (lower is better)
Translates to: TRRAARAPAAPN*SSAPGSPGRTP
Trigger: CGGTGTACGCCCTGGGCTACCTGGGGCTGAGCTTCAGTTGGGTGCTGCTGGCGCTCGGGCTGCTCGCCTGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS GCA 72 bp CACTTTTGTGAAGCTGAAGGTGCTGAGGTGAGCATTTaGTCCACGCACAGCTGGCTCTATGGTTTCTCGAAA +
Preference number: 6 (lower is better)
Translates to: HFCEAEGAEVSI*STHSWLYGFSK
Trigger: TTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCAAATGCTCACCTCAGCACCTTCAGCTTCACAAAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS CCA 72 bp GAAGGTGCTGAGGTGAGCATTTGCTCCACGCACAGCTaGCTCTATGGTTTCTCGAAAGAGCTTCTCGATAAA +
Preference number: 6 (lower is better)
Translates to: EGAEVSICSTHS*LYGFSKELLDK
Trigger: TTTATCGAGAAGCTCTTTCGAGAAACCATAGAGCCAGCTGTGCGTGGAGCAAATGCTCACCTCAGCACCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2
CDS CAA 90 bp ACCACTGACCGTTTGCTTTGGTATGGGAAACCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGGAACGGTGATTCGATTGGGAAGCAC +
Preference number: 6 (lower is better)
Translates to: TTDRLLWYGKPQLSY*NFTDKRNGDSIGKH
Trigger: GTGCTTCCCAATCGAATCACCGTTCCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGGTTTCCCATACCAAAGCAAACGGTCAGTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
CDS CAA 72 bp GACACCCTTTGGTATGGGAAACCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGGAACGGTGATTCGATT +
Preference number: 6 (lower is better)
Translates to: DTLWYGKPQLSY*NFTDKRNGDSI
Trigger: AATCGAATCACCGTTCCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGGTTTCCCATACCAAAGGGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000100986.4
ENSMUST00000220816.2
CDS CAA 72 bp CGTTTGCTTTGGTATGGGAAACCGCAGCTGAGCTATTaGAACTTCACTGACAAGAGGAACGGTGATTCGATT +
Preference number: 6 (lower is better)
Translates to: RLLWYGKPQLSY*NFTDKRNGDSI
Trigger: AATCGAATCACCGTTCCTCTTGTCAGTGAAGTTCAAATAGCTCAGCTGCGGTTTCCCATACCAAAGCAAACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000220720.2
ENSMUST00000220804.2
CDS TCA 72 bp GGCTCTATGGTTTCTCGAAAGAGCTTCTCGATAAACTaGCAAATAAAGGGCCACATGTGCTTTACAGTCTTA +
Preference number: 6 (lower is better)
Translates to: GSMVSRKSFSIN*QIKGHMCFTVL
Trigger: TAAGACTGTAAAGCACATGTGGCCCTTTATTTGTCAGTTTATCGAGAAGCTCTTTCGAGAAACCATAGAGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000100986.4
ENSMUST00000220720.2
ENSMUST00000220816.2