RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESS2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000003527

Ensembl transcript IDs: ENSMUST00000003621.10, ENSMUST00000232423.2

Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CAGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTaGAGCAGACACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCT +
Preference number: 1 (lower is better)
Translates to: QSITEGSQSRTSSRS*SRHHEGVSRPGWLP
Trigger: AGGAAGCCAGCCAGGACGTGACACTCCTTCATGGTGTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR TCA 90 bp CACCTGATACGAAAGCCCAGAACCAACAAACCGAATGGCCAGCTCTaGCTAGGAGGCCCACAAGCTCAATGGCTCCACTTTTGGGGTCTG +
Preference number: 1 (lower is better)
Translates to: HLIRKPRTNKPNGQL*LGGPQAQWLHFWGL
Trigger: CAGACCCCAAAAGTGGAGCCATTGAGCTTGTGGGCCTCCTAGTCAGAGCTGGCCATTCGGTTTGTTGGTTCTGGGCTTTCGTATCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR TCA 90 bp TGGAATAATCAACTGTGGTCTGTGTCTCCAAGGCCTGGAATCCTCTaGGTGGTAGAAAGCTGCCCTAGATGCTCCACAAAGTGTTCCACA +
Preference number: 1 (lower is better)
Translates to: WNNQLWSVSPRPGIL*VVESCPRCSTKCST
Trigger: TGTGGAACACTTTGTGGAGCATCTAGGGCAGCTTTCTACCACTCAGAGGATTCCAGGCCTTGGAGACACAGACCACAGTTGATTATTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACATTTCAGCAGGGCCCTaGGAACAGCACCAACGCTGT +
Preference number: 2 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDISAGP*EQHQRC
Trigger: ACAGCGTTGGTGCTGTTCCCAGGGCCCTGCTGAAAT...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR TCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACCCGAATGGCCAGCTCTaGCTAGGAGGCCCACAAGCT +
Preference number: 2 (lower is better)
Translates to: SPSLREARAGPQVGAEADPNGQL*LGGPQA
Trigger: AGCTTGTGGGCCTCCTAGTCAGAGCTGGCCATTCGG...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR GCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACGAAAGCTGCCCTAGATaGTCCACAAAGTGTTCCACA +
Preference number: 2 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDESCPR*STKCST
Trigger: TGTGGAACACTTTGTGGAGCATCTAGGGCAGCTTTC...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACTGGAATAATCAACTGTaGTCTGTGTCTCCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDWNNQL*SVSPRP
Trigger: AGGCCTTGGAGACACAGACCACAGTTGATTATTCCA...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR TCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACTCCAGCAGGCAGAGCTaGAGAACAGTGGGTCAAGCA +
Preference number: 2 (lower is better)
Translates to: SPSLREARAGPQVGAEADSSRQS*RTVGQA
Trigger: TGCTTGACCCACTGTTCTTCAGCTCTGCCTGCTGGA...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR TCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCAGGCCTGGAATCCTCTaGGTGGTAGAAAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALRPGIL*VVESCP
Trigger: AGGGCAGCTTTCTACCACTCAGAGGATTCCAGGCCT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR GCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCGAAAGCTGCCCTAGATaGTCCACAAAGTGTTCCACA +
Preference number: 2 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGESCPR*STKCST
Trigger: TGTGGAACACTTTGTGGAGCATCTAGGGCAGCTTTC...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR CAA 90 bp CCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCCTACATCGATaGACGATCAAGAAAATGCCTGCAGACATGCCGTCAAGCCCATCT +
Preference number: 2 (lower is better)
Translates to: PGFLTQPKTTALLHR*TIKKMPADMPSSPS
Trigger: AGATGGGCTTGACGGCATGTCTGCAGGCATTTTCTTGATCGTCAATCGATGTAGGAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR TCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTCCGAATGGCCAGCTCTaGCTAGGAGGCCCACAAGCT +
Preference number: 2 (lower is better)
Translates to: FACLQGACTLSFHSTAQAPNGQL*LGGPQA
Trigger: AGCTTGTGGGCCTCCTAGTCAGAGCTGGCCATTCGG...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR GCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCCTAGTTACTCTTAGTTaGTGGTGCGCATGGCATTTG +
Preference number: 2 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGLVTLS*WCAWHL
Trigger: CAAATGCCATGCGCACCAGCAACTAAGAGTAACTAG...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCTGTGTCTCCAAGGCCTaGAATCCTCTGAGTGGTAGA +
Preference number: 2 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALCVSKA*NPLSGR
Trigger: TCTACCACTCAGAGGATTCCAGGCCTTGGAGACACA...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCAGAGCTGAAGAACAGTaGGTCAAGCAGAGAGGAGGA +
Preference number: 2 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALRAEEQ*VKQRGG
Trigger: TCCTCCTCTCTGCTTGACCCACTGTTCTTCAGCTCT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCAGTTGCTGGTGCGCATaGCATTTGCATGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALSCWCA*HLHVCR
Trigger: CCTGCAAACATGCAAATGCCATGCGCACCAGCAACT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR GCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCTGTTTGCAGGGAGCCTaGACTCTTTCTTTTCATAGT +
Preference number: 2 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGCLQGA*TLSFHS
Trigger: ACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACA...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR TCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTAGGCCTGGAATCCTCTaGGTGGTAGAAAGCTGCCCT +
Preference number: 2 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKARPGIL*VVESCP
Trigger: AGGGCAGCTTTCTACCACTCAGAGGATTCCAGGCCT...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR GCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCAAAAGGTGGCTCTCATaGAATCAAAGCAAGACCCAG +
Preference number: 2 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALKRWLS*NQSKTQ
Trigger: CTGGGTCTTGCTTTGATTGCATGAGAGCCACCTTTT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGTGGAATAATCAACTGTaGTCTGTGTCTCCAAGGCCT +
Preference number: 2 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRWNNQL*SVSPRP
Trigger: AGGCCTTGGAGACACAGACCACAGTTGATTATTCCA...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGACAATGGCTCCACTTTTaGGGTCTGTGGTATCCTTTA +
Preference number: 2 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGQWLHF*GLWYPL
Trigger: TAAAGGATACCACAGACCCCAAAAGTGGAGCCATTG...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CAA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACTGGTGCGCATGGCATTaGCATGTTTGCAGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: SPSLREARAGPQVGAEADWCAWH*HVCREP
Trigger: AGGCTCCCTGCAAACATGCAAATGCCATGCGCACCA...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR CCA 72 bp ACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTaGCCAGACAGTTCCAGGTGTTCTTTAATGAGGATT +
Preference number: 3 (lower is better)
Translates to: TPTWAPGHGSAA*PDSSRCSLMRI
Trigger: AATCCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CAA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCTGGTGCGCATGGCATTaGCATGTTTGCAGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALWCAWH*HVCREP
Trigger: AGGCTCCCTGCAAACATGCAAATGCCATGCGCACCA...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR TCA 72 bp CGAAAGCCCAGAACCAACAAACCGAATGGCCAGCTCTaGCTAGGAGGCCCACAAGCTCAATGGCTCCACTTT +
Preference number: 3 (lower is better)
Translates to: RKPRTNKPNGQL*LGGPQAQWLHF
Trigger: AAAGTGGAGCCATTGAGCTTGTGGGCCTCCTAGTCAGAGCTGGCCATTCGGTTTGTTGGTTCTGGGCTTTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CAA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTAGGGAGGCAGCCAGGTaGCTGGGAGGTACTGGTTCG +
Preference number: 3 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKAREAAR*LGGTGS
Trigger: CGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCT...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR TCA 72 bp CAACTGTGGTCTGTGTCTCCAAGGCCTGGAATCCTCTaGGTGGTAGAAAGCTGCCCTAGATGCTCCACAAAG +
Preference number: 3 (lower is better)
Translates to: QLWSVSPRPGIL*VVESCPRCSTK
Trigger: CTTTGTGGAGCATCTAGGGCAGCTTTCTACCACTCAGAGGATTCCAGGCCTTGGAGACACAGACCACAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR-3UTR CAA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCATGGCATTTGCATGTTaGCAGGGAGCCTGCACTCTT +
Preference number: 3 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALMAFAC*QGACTL
Trigger: AAGAGTGCAGGCTCCCTGCAAACATGCAAATGCCAT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR GCA 72 bp CTGGTGCGCATGGCATTTGCATGTTTGCAGGGAGCCTaGACTCTTTCTTTTCATAGTACAGCTCAGGCTGAG +
Preference number: 3 (lower is better)
Translates to: LVRMAFACLQGA*TLSFHSTAQAE
Trigger: CTCAGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAATGCCATGCGCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR GCA 72 bp ACTCTTAGTTGCTGGTGCGCATGGCATTTGCATGTTTaGAGGGAGCCTGCACTCTTTCTTTTCATAGTACAG +
Preference number: 3 (lower is better)
Translates to: TLSCWCAWHLHV*REPALFLFIVQ
Trigger: CTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAATGCCATGCGCACCAGCAACTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACTCTAGGTCTCGGCCCTaGGGCCGGGGCTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDSRSRP*GRGLLP
Trigger: GGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGA...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACACCCAGGGGCTGGAGTaGTTGTGGGTGTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDTQGLE*LWVSAA
Trigger: GGCCGCAGACACCCACAAGCACTCCAGCCCCTGGGT...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACAGCAGACCCAGGGGCTaGAGTGCTTGTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDSRPRG*SACGCL
Trigger: CAGACACCCACAAGCACTCCAGCCCCTGGGTCTGCT...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACGCTGGGGTCTTGAGGTaGGAAGATCGTGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDAGVLR*EDRAGD
Trigger: ATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGC...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCCTGCGGCCCACCAGCTaGGGTCTTGAGGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: LSIEGSSPAPLASNPETPLRPTS*GLEVGR
Trigger: TCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAG...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCGTTTGTGCTGGGCATTaGGGGCAGCCGCCTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LSIEGSSPAPLASNPETPVCAGH*GQPPAE
Trigger: TTCAGCAGGCGGCTGCCCTCAATGCCCAGCACAAAC...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACGTGCTTGTGGGTGTCTaGGGCCCACCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPSLREARAGPQVGAEADVLVGV*GPPAGV
Trigger: GACCCCAGCTGGTGGGCCGCAGACACCCACAAGCAC...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACGGCTGGGGACATGGCTaGGCTCAAGCCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: QGGSQVAGRYWFESQEENGWGHG*AQAFGS
Trigger: ACTCCCAAAGGCTTGAGCCCAGCCATGTCCCCAGCC...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACGATCTGTGTACTTGCTaGCTGTCCTGCTTACGAGGC +
Preference number: 4 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDDLCTC*LSCLRG
Trigger: GCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATC...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCGTCTGTGATGGAGGCTaGGTCCTGTGTGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LSIEGSSPAPLASNPETPVCDGG*VLCEGC
Trigger: ACACCCCTCACACAGGACCCAGCCTCCATCACAGAC...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACGGGACTCCTGGGGAATaGGTTCCTTGCCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPSLREARAGPQVGAEADGTPGE*VPCRQG
Trigger: GCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCC...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGGTGCTTGTGGGTGTCTaGGGCCCACCAGCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRVLVGV*GPPAGV
Trigger: GACCCCAGCTGGTGGGCCGCAGACACCCACAAGCAC...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGACCCAGGGGCTGGAGTaGTTGTGGGTGTCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRTQGLE*LWVSAA
Trigger: GGCCGCAGACACCCACAAGCACTCCAGCCCCTGGGT...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACATCCAGGCTGGGCAGTaGCTCCTTCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QGGSQVAGRYWFESQEENIQAGQ*LLLLFL
Trigger: GAGGAAGAGGAGAAGGAGCCACTGCCCAGCCTGGAT...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACTGGCAGCCGCTTCATTaGCCATCTTCAGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: QGGSQVAGRYWFESQEENWQPLH*PSSGPD
Trigger: GTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCA...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCGGCTGGGGACATGGCTaGGCTCAAGCCTTTGGGAGT +
Preference number: 4 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGGWGHG*AQAFGS
Trigger: ACTCCCAAAGGCTTGAGCCCAGCCATGTCCCCAGCC...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCGTAGGGCTGGGGACATaGCTGGGCTCAAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGVGLGT*LGSSLW
Trigger: CCAAAGGCTTGAGCCCAGCCATGTCCCCAGCCCTAC...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCGGGACTCCTGGGGAATaGGTTCCTTGCCGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALGTPGE*VPCRQG
Trigger: GCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCC...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACGGCTTCTTAAACAACTaGTCTTCATCAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDGFLNN*SSSGTP
Trigger: GGGTGTCCCTGATGAAGAGCAGTTGTTTAAGAAGCC...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCACTTGCTGGCTGTCCTaGTTACGAGGCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGTCWLS*LRGAVG
Trigger: CCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGT...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACGGGATGGTGTATAGCTaGCCCGCAGGGCACGATCTG +
Preference number: 4 (lower is better)
Translates to: SPSLREARAGPQVGAEADGMVYS*PAGHDL
Trigger: CAGATCGTGCCCTGCGGGCCAGCTATACACCATCCC...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACGGGCAGAGCCAAACTTaGTGGCAATCTGGCGCATGC +
Preference number: 4 (lower is better)
Translates to: SPSLREARAGPQVGAEADGQSQT*WQSGAC
Trigger: GCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCC...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCTGGCAATCTGGCGCATaGGCTCCAAATCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: LSIEGSSPAPLASNPETPWQSGA*APNLRF
Trigger: AAAACGGAGATTTGGAGCGCATGCGCCAGATTGCCA...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGCGTCAGGGCCGACCTTaGCCTGTTTGTGCTGGGCAT +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRRQGRP*PVCAGH
Trigger: ATGCCCAGCACAAACAGGGCAAGGTCGGCCCTGACG...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCCTCCGCAACGCTTCCTaGTTCTTCGCCCGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGLRNAS*FFARFL
Trigger: CAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAG...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACACTTGCTGGCTGTCCTaGTTACGAGGCGCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SPSLREARAGPQVGAEADTCWLS*LRGAVG
Trigger: CCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGT...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCCACGATCTGTGTACTTaGTGGCTGTCCTGCTTACGA +
Preference number: 4 (lower is better)
Translates to: LSIEGSSPAPLASNPETPHDLCT*WLSCLR
Trigger: TCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTG...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACGAGGTGGGAAGATCGTaGTGGGGATGGTGTATAGCT +
Preference number: 4 (lower is better)
Translates to: QGGSQVAGRYWFESQEENEVGRS*WGWCIA
Trigger: AGCTATACACCATCCCCAGCACGATCTTCCCACCTC...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACGAGCAGGAGAAGGAGTaGCAACAAATCCAAAGCCGC +
Preference number: 4 (lower is better)
Translates to: QGGSQVAGRYWFESQEENEQEKE*QQIQSR
Trigger: GCGGCTTTGGATTTGTTGCCACTCCTTCTCCTGCTC...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGGTAGGGCTGGGGACATaGCTGGGCTCAAGCCTTTGG +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRVGLGT*LGSSLW
Trigger: CCAAAGGCTTGAGCCCAGCCATGTCCCCAGCCCTAC...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACCACGATCTGTGTACTTaGTGGCTGTCCTGCTTACGA +
Preference number: 4 (lower is better)
Translates to: QGGSQVAGRYWFESQEENHDLCT*WLSCLR
Trigger: TCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTG...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACAGAAGTCTGAAGCTTTaGGTCGGGCAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SPSLREARAGPQVGAEADRSLKL*VGQGAA
Trigger: TGCAGCTCCCTGCCCGACGCAAAGCTTCAGACTTCT...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGATCCAGGCTGGGCAGTaGCTCCTTCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRIQAGQ*LLLLFL
Trigger: GAGGAAGAGGAGAAGGAGCCACTGCCCAGCCTGGAT...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCACTCTGGGGGACTCCTaGGGAATGAGTTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALTLGDS*GMSSLP
Trigger: CGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCGAGCAGGAGAAGGAGTaGCAACAAATCCAAAGCCGC +
Preference number: 4 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGEQEKE*QQIQSR
Trigger: GCGGCTTTGGATTTGTTGCCACTCCTTCTCCTGCTC...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGCTGGCTCCAAGATCTTaGATGTGGGTCCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRLAPRS*MWVQVS
Trigger: GGACACCTGGACCCACATTCAAGATCTTGGAGCCAG...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGAGAAGTCTGAAGCTTTaGGTCGGGCAGGGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRRSLKL*VGQGAA
Trigger: TGCAGCTCCCTGCCCGACGCAAAGCTTCAGACTTCT...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGCAGCACAGCAGAGCCTaGGTGTACCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRQHSRA*VYLRSF
Trigger: GAAACTCCTGAGGTACACCCAGGCTCTGCTGTGCTG...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGAGAAGACATCCAGGCTaGGCAGTGGCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRRRHPG*AVAPSP
Trigger: AGGAGAAGGAGCCACTGCCCAGCCTGGATGTCTTCT...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAAGGGCAGCCGCCTGCTaGAGCTGGGACCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGRAAAC*SWDLLK
Trigger: TTTGAGCAGGTCCCAGCTTCAGCAGGCGGCTGCCCT...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTAGGGCAGCCGCCTGCTaGAGCTGGGACCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQARAAAC*SWDLLK
Trigger: TTTGAGCAGGTCCCAGCTTCAGCAGGCGGCTGCCCT...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCGTTCCCGAGATATCTTaGCCAGGGCAGAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALVPEIS*PGQSQT
Trigger: AGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAAC...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAGGCCCAGACGCTCCCTaGGTCCTGGCTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGGPDAP*VLAPRS
Trigger: AGATCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCC...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCAACTTGATGGCAATCTaGCGCATGCGCTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGNLMAI*RMRSKS
Trigger: AGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTT...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCGATCTGTGTACTTGCTaGCTGTCCTGCTTACGAGGC +
Preference number: 4 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALDLCTC*LSCLRG
Trigger: GCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATC...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGACTGCGGCCCACCAGCTaGGGTCTTGAGGTGGGAAGA +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGLRPTS*GLEVGR
Trigger: TCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAG...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTCACCAGCTGGGGTCTTaGGGTGGGAAGATCGTGCTG +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQAHQLGS*GGKIVL
Trigger: CAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTG...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTCACCAGCTGGGGTCTTaGGGTGGGAAGATCGTGCTG +
Preference number: 4 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKAHQLGS*GGKIVL
Trigger: CAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTG...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTGCAGCAGGTTGTCTGTaGTGGAGGCTGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKAAAGCL*WRLGPV
Trigger: CACAGGACCCAGCCTCCATCACAGACAACCTGCTGC...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAGCAGCAGGTTGTCTGTaGTGGAGGCTGGGTCCTGTG +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGAAGCL*WRLGPV
Trigger: CACAGGACCCAGCCTCCATCACAGACAACCTGCTGC...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCTGGCAATCTGGCGCATaGGCTCCAAATCTCCGTTTT +
Preference number: 4 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALWQSGA*APNLRF
Trigger: AAAACGGAGATTTGGAGCGCATGCGCCAGATTGCCA...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGGGCCCAGACGCTCCCTaGGTCCTGGCTCCAAGATCT +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRGPDAP*VLAPRS
Trigger: AGATCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCC...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTCGTCGGGCAGGGAGCTaGAGCAGGTTGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKARRAGS*SRLSVM
Trigger: CATCACAGACAACCTGCTGCAGCTCCCTGCCCGACG...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTTTGCCCTGTTTGTGCTaGGCATTGAGGGCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQALPCLC*ALRAAA
Trigger: GGCGGCTGCCCTCAATGCCCAGCACAAACAGGGCAA...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAGGGCAGAGCCAAACTTaGTGGCAATCTGGCGCATGC +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGGQSQT*WQSGAC
Trigger: GCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCC...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGCGTCGGGCAGGGAGCTaGAGCAGGTTGTCTGTGATG +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRRRAGS*SRLSVM
Trigger: CATCACAGACAACCTGCTGCAGCTCCCTGCCCGACG...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTACTCTGGGGGACTCCTaGGGAATGAGTTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQATLGDS*GMSSLP
Trigger: CGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGT...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTTGGCAGCCGCTTCATTaGCCATCTTCAGGCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKAWQPLH*PSSGPD
Trigger: GTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCA...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGGGGATGGTGTATAGCTaGCCCGCAGGGCACGATCTG +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRGMVYS*PAGHDL
Trigger: CAGATCGTGCCCTGCGGGCCAGCTATACACCATCCC...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTAGATCGTGCTGGGGATaGTGTATAGCTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKARSCWG*CIAGPQ
Trigger: CTGCGGGCCAGCTATACACCATCCCCAGCACGATCT...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAAGATCGTGCTGGGGATaGTGTATAGCTGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGRSCWG*CIAGPQ
Trigger: CTGCGGGCCAGCTATACACCATCCCCAGCACGATCT...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAGTCTGTGATGGAGGCTaGGTCCTGTGTGAGGGGTGT +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGVCDGG*VLCEGC
Trigger: ACACCCCTCACACAGGACCCAGCCTCCATCACAGAC...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
3UTR CAA 72 bp CTGACTCAACCCAAGACCACTGCCCTCCTACATCGATaGACGATCAAGAAAATGCCTGCAGACATGCCGTCA +
Preference number: 4 (lower is better)
Translates to: LTQPKTTALLHR*TIKKMPADMPS
Trigger: TGACGGCATGTCTGCAGGCATTTTCTTGATCGTCAATCGATGTAGGAGGGCAGTGGTCTTGGGTTGAGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR TCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTCTGGCTCCAAGATCTTaGATGTGGGTCCAGGTGTCC +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQALAPRS*MWVQVS
Trigger: GGACACCTGGACCCACATTCAAGATCTTGGAGCCAG...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTCTCCGCAACGCTTCCTaGTTCTTCGCCCGGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKALRNAS*FFARFL
Trigger: CAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAG...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTCAGCACAGCAGAGCCTaGGTGTACCTCAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQAQHSRA*VYLRSF
Trigger: GAAACTCCTGAGGTACACCCAGGCTCTGCTGTGCTG...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAAGAAGACATCCAGGCTaGGCAGTGGCTCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGRRHPG*AVAPSP
Trigger: AGGAGAAGGAGCCACTGCCCAGCCTGGATGTCTTCT...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGGCTGGGGTCTTGAGGTaGGAAGATCGTGCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRAGVLR*EDRAGD
Trigger: ATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGC...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTGAGGTGGGAAGATCGTaGTGGGGATGGTGTATAGCT +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQAEVGRS*WGWCIA
Trigger: AGCTATACACCATCCCCAGCACGATCTTCCCACCTC...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTACGCTCCCTGCGTCCTaGCTCCAAGATCTTGAATGT +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQATLPAS*LQDLEC
Trigger: ACATTCAAGATCTTGGAGCCAGGACGCAGGGAGCGT...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR GCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGGTTCCCGAGATATCTTaGCCAGGGCAGAGCCAAACT +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRVPEIS*PGQSQT
Trigger: AGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAAC...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGAACTTGATGGCAATCTaGCGCATGCGCTCCAAATCT +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRNLMAI*RMRSKS
Trigger: AGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTT...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTTTGATGCTCTGCCGATaGGAGTTCAAGATTATCTTT +
Preference number: 4 (lower is better)
Translates to: FACLQGACTLSFHSTAQALMLCR*EFKIIF
Trigger: AAAGATAATCTTGAACTCCCATCGGCAGAGCATCAA...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CCA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGTTGATGCTCTGCCGATaGGAGTTCAAGATTATCTTT +
Preference number: 4 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRLMLCR*EFKIIF
Trigger: AAAGATAATCTTGAACTCCCATCGGCAGAGCATCAA...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp GGTGTGCGTGTAGCAGACCCAGGGGCTGGAGTGCTTGTGGGTGTCTaGGGCCCACCAGCTGGGGTCTTGAGGTGGGAAGATCGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: GVRVADPGAGVLVGV*GPPAGVLRWEDRAG
Trigger: CCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAGACACCCACAAGCACTCCAGCCCCTGGGTCTGCTACACGCACACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACCCGTCAGGGCCGACCTaGCCCTGTTTGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDPSGPT*PCLCWA
Trigger: TGCCCAGCACAAACAGGGCAAGGTCGGCCCTGACGG...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 90 bp GGGCTGGAGTGCTTGTGGGTGTCTGCGGCCCACCAGCTGGGGTCTTaGGGTGGGAAGATCGTGCTGGGGATGGTGTATAGCTGGCCCGCA +
Preference number: 5 (lower is better)
Translates to: GLECLWVSAAHQLGS*GGKIVLGMVYSWPA
Trigger: TGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAGACACCCACAAGCACTCCAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp GGGTGTCTGCGGCCCACCAGCTGGGGTCTTGAGGTGGGAAGATCGTaGTGGGGATGGTGTATAGCTGGCCCGCAGGGCACGATCTGTGTA +
Preference number: 5 (lower is better)
Translates to: GCLRPTSWGLEVGRS*WGWCIAGPQGTICV
Trigger: TACACAGATCGTGCCCTGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAGACACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp CGGCCCACCAGCTGGGGTCTTGAGGTGGGAAGATCGTGCTGGGGATaGTGTATAGCTGGCCCGCAGGGCACGATCTGTGTACTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: RPTSWGLEVGRSCWG*CIAGPQGTICVLAG
Trigger: GCCAGCAAGTACACAGATCGTGCCCTGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp TATAGCTGGCCCGCAGGGCACGATCTGTGTACTTGCTGGCTGTCCTaGTTACGAGGCGCTGTAGGGCTGGGGACATGGCTGGGCTCAAGC +
Preference number: 5 (lower is better)
Translates to: YSWPAGHDLCTCWLS*LRGAVGLGTWLGSS
Trigger: GCTTGAGCCCAGCCATGTCCCCAGCCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGCCCTGCGGGCCAGCTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp CTGGGGATGGTGTATAGCTGGCCCGCAGGGCACGATCTGTGTACTTaGTGGCTGTCCTGCTTACGAGGCGCTGTAGGGCTGGGGACATGG +
Preference number: 5 (lower is better)
Translates to: LGMVYSWPAGHDLCT*WLSCLRGAVGLGTW
Trigger: CCATGTCCCCAGCCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGCCCTGCGGGCCAGCTATACACCATCCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp GGGATGGTGTATAGCTGGCCCGCAGGGCACGATCTGTGTACTTGCTaGCTGTCCTGCTTACGAGGCGCTGTAGGGCTGGGGACATGGCTG +
Preference number: 5 (lower is better)
Translates to: GMVYSWPAGHDLCTC*LSCLRGAVGLGTWL
Trigger: CAGCCATGTCCCCAGCCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGCCCTGCGGGCCAGCTATACACCATCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp AGACCCAGGGGCTGGAGTGCTTGTGGGTGTCTGCGGCCCACCAGCTaGGGTCTTGAGGTGGGAAGATCGTGCTGGGGATGGTGTATAGCT +
Preference number: 5 (lower is better)
Translates to: RPRGWSACGCLRPTS*GLEVGRSCWGWCIA
Trigger: AGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAGACACCCACAAGCACTCCAGCCCCTGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACGGTTCCCGAGATATCTaGCCCAGGGCAGAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDGSRDI*PRAEPN
Trigger: GTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAACC...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AACCCTGAGACACCCACGTGGGCCCCAGGACATGGATCAGCAGCCTGGCCAGACAAGAAGTCTGAAGCTTaGCGTCGGGCAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: NPETPTWAPGHGSAAWPDKKSEA*RRAGSC
Trigger: GCAGCTCCCTGCCCGACGCAAAGCTTCAGACTTCTT...GTCTGGCCAGGCTGCTGATCCATGTCCTGGGGCCCACGTGGGTGTCTCAGGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 90 bp TGGCAACAAATCCAAAGCCGCCCACTCTGGGGGACTCCTGGGGAATaGGTTCCTTGCCGTCAGGGCCGACCTTGCCCTGTTTGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: WQQIQSRPLWGTPGE*VPCRQGRPCPVCAG
Trigger: CCCAGCACAAACAGGGCAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGTGGGCGGCTTTGGATTTGTTGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp GCAACGCTTCCTGCTTCTTCGCCCGGTTTTTGGCAGCCGCTTCATTaGCCATCTTCAGGCCCAGACGCTCCCTGCGTCCTGGCTCCAAGA +
Preference number: 5 (lower is better)
Translates to: ATLPASSPGFWQPLH*PSSGPDAPCVLAPR
Trigger: TCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp TGTCTGCGGCCCACCAGCTGGGGTCTTGAGGTGGGAAGATCGTGCTaGGGATGGTGTATAGCTGGCCCGCAGGGCACGATCTGTGTACTT +
Preference number: 5 (lower is better)
Translates to: CLRPTSWGLEVGRSC*GWCIAGPQGTICVL
Trigger: AAGTACACAGATCGTGCCCTGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACTGGGGCCGGGGCTTGTaGCCCAGCACAGCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: SPSLREARAGPQVGAEADWGRGL*PSTAEP
Trigger: AGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCA...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 90 bp CCATCTTCAGGCCCAGACGCTCCCTGCGTCCTGGCTCCAAGATCTTaGATGTGGGTCCAGGTGTCCTGTCCACATAGGGGCTCTCGGATC +
Preference number: 5 (lower is better)
Translates to: PSSGPDAPCVLAPRS*MWVQVSCPHRGSRI
Trigger: GATCCGAGAGCCCCTATGTGGACAGGACACCTGGACCCACATTCAAGATCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCCTGAAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp GAAGGAGTGGCAACAAATCCAAAGCCGCCCACTCTGGGGGACTCCTaGGGAATGAGTTCCTTGCCGTCAGGGCCGACCTTGCCCTGTTTG +
Preference number: 5 (lower is better)
Translates to: EGVATNPKPPTLGDS*GMSSLPSGPTLPCL
Trigger: CAAACAGGGCAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGTGGGCGGCTTTGGATTTGTTGCCACTCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACCCGACCTTGCCCTGTTaGTGCTGGGCATTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: QGGSQVAGRYWFESQEENPTLPC*CWALRA
Trigger: TGCCCTCAATGCCCAGCACAAACAGGGCAAGGTCGG...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACCCGTCAGGGCCGACCTaGCCCTGTTTGTGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: SPSLREARAGPQVGAEADPSGPT*PCLCWA
Trigger: TGCCCAGCACAAACAGGGCAAGGTCGGCCCTGACGG...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCGCTGGGCTCAAGCCTTaGGGAGTAAGACTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: LSIEGSSPAPLASNPETPAGLKP*GVRLAK
Trigger: CTTGGCCAGTCTTACTCCCAAAGGCTTGAGCCCAGC...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCAAGAAGTCTGAAGCTTaGCGTCGGGCAGGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSIEGSSPAPLASNPETPKKSEA*RRAGSC
Trigger: GCAGCTCCCTGCCCGACGCAAAGCTTCAGACTTCTT...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp AGCCGCTTCATTGGCCATCTTCAGGCCCAGACGCTCCCTGCGTCCTaGCTCCAAGATCTTGAATGTGGGTCCAGGTGTCCTGTCCACATA +
Preference number: 5 (lower is better)
Translates to: SRFIGHLQAQTLPAS*LQDLECGSRCPVHI
Trigger: TATGTGGACAGGACACCTGGACCCACATTCAAGATCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCCTGAAGATGGCCAATGAAGCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACCCTGGCTCCAAGATCTaGAATGTGGGTCCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: QGGSQVAGRYWFESQEENPGSKI*NVGPGV
Trigger: GACACCTGGACCCACATTCAAGATCTTGGAGCCAGG...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACGCACGATCTGTGTACTaGCTGGCTGTCCTGCTTACG +
Preference number: 5 (lower is better)
Translates to: QGGSQVAGRYWFESQEENARSVY*LAVLLT
Trigger: CGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGC...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCGGGAGCTGCAGCAGGTaGTCTGTGATGGAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALGSCSR*SVMEAG
Trigger: CCCAGCCTCCATCACAGACAACCTGCTGCAGCTCCC...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 90 bp GTGGTGGAGGTTCCCGAGATATCTTGCCCAGGGCAGAGCCAAACTTaGTGGCAATCTGGCGCATGCGCTCCAAATCTCCGTTTTCCTCGG +
Preference number: 5 (lower is better)
Translates to: VVEVPEISCPGQSQT*WQSGACAPNLRFPR
Trigger: CCGAGGAAAACGGAGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAACCTCCACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp TCCCGAGATATCTTGCCCAGGGCAGAGCCAAACTTGATGGCAATCTaGCGCATGCGCTCCAAATCTCCGTTTTCCTCGGCCTCCAGGTAC +
Preference number: 5 (lower is better)
Translates to: SRDILPRAEPNLMAI*RMRSKSPFSSASRY
Trigger: GTACCTGGAGGCCGAGGAAAACGGAGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CAGGGAGGCAGCCAGGTTGCTGGGAGGTACTGGTTCGAGTCACAGGAAGAGAACTCCTGGAAGGAGGCATaGTCCTCACTTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: QGGSQVAGRYWFESQEENSWKEA*SSLVYW
Trigger: CCAGTACACAAGTGAGGACAATGCCTCCTTCCAGGA...GTTCTCTTCCTGTGACTCGAACCAGTACCTCCCAGCAACCTGGCTGCCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGGGTTCCCGAGATATCTaGCCCAGGGCAGAGCCAAAC +
Preference number: 5 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRGSRDI*PRAEPN
Trigger: GTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAACC...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CTCAGCATAGAAGGCAGCTCCCCAGCACCCCTTGCTTCCAACCCTGAGACACCCTACATGAGAGAGTTCTaGGCCTTGTACTTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: LSIEGSSPAPLASNPETPYMREF*ALYFQV
Trigger: GACCTGGAAGTACAAGGCCAAGAACTCTCTCATGTA...GGGTGTCTCAGGGTTGGAAGCAAGGGGTGCTGGGGAGCTGCCTTCTATGCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACCCTGGCTCCAAGATCTaGAATGTGGGTCCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: SPSLREARAGPQVGAEADPGSKI*NVGPGV
Trigger: GACACCTGGACCCACATTCAAGATCTTGGAGCCAGG...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCTTGGCAGCCGCTTCATaGGCCATCTTCAGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALLAAAS*AIFRPR
Trigger: TCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAA...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGTTGGCAGCCGCTTCATaGGCCATCTTCAGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRLAAAS*AIFRPR
Trigger: TCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAA...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCGCTGGGCTCAAGCCTTaGGGAGTAAGACTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALAGLKP*GVRLAK
Trigger: CTTGGCCAGTCTTACTCCCAAAGGCTTGAGCCCAGC...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp GGAGTAAGACTGGCCAAGTTCTCTGTAACTCTCCGCAACGCTTCCTaGTTCTTCGCCCGGTTTTTGGCAGCCGCTTCATTGGCCATCTTC +
Preference number: 5 (lower is better)
Translates to: GVRLAKFSVTLRNAS*FFARFLAAASLAIF
Trigger: GAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAGAGTTACAGAGAACTTGGCCAGTCTTACTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTCCTCTCTAGTTTCCTCCCAGGCTTTCTGACTCAACCCAAGACCACTGCCCTCAGGGCAGAGCCAAACTaGATGGCAATCTGGCGCATG +
Preference number: 5 (lower is better)
Translates to: FLSSFLPGFLTQPKTTALRAEPN*MAIWRM
Trigger: CATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCT...GAGGGCAGTGGTCTTGGGTTGAGTCAGAAAGCCTGGGAGGAAACTAGAGAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGCAGGGGCTGGAGTGCTaGTGGGTGTCTGCGGCCCAC +
Preference number: 5 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRQGLEC*WVSAAH
Trigger: GTGGGCCGCAGACACCCACAAGCACTCCAGCCCCTG...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp AGTCCATCACTGAGGGAAGCCAGAGCAGGACCTCAAGTAGGAGCTGAAGCAGACAGAGAGTTCTTGGCCTaGTACTTCCAGGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: SPSLREARAGPQVGAEADREFLA*YFQVST
Trigger: AGTGGAGACCTGGAAGTACAAGGCCAAGAACTCTCT...GTCTGCTTCAGCTCCTACTTGAGGTCCTGCTCTGGCTTCCCTCAGTGATGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp ACCATGAAGGAGTGTCACGTCCTGGCTGGCTTCCTCTCTAGTTTCCTCCCAGGCTACATGAGAGAGTTCTaGGCCTTGTACTTCCAGGTC +
Preference number: 5 (lower is better)
Translates to: TMKECHVLAGFLSSFLPGYMREF*ALYFQV
Trigger: GACCTGGAAGTACAAGGCCAAGAACTCTCTCATGTA...GCCTGGGAGGAAACTAGAGAGGAAGCCAGCCAGGACGTGACACTCCTTCATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTCCGACCTTGCCCTGTTaGTGCTGGGCATTGAGGGCA +
Preference number: 5 (lower is better)
Translates to: FACLQGACTLSFHSTAQAPTLPC*CWALRA
Trigger: TGCCCTCAATGCCCAGCACAAACAGGGCAAGGTCGG...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp GAGAGTTCTTGGCCTTGTACTTCCAGGTCTCCACTCCAGCCTGACTaGTCTCAATGGCTTGATGCTCTGCCGATGGGAGTTCAAGATTAT +
Preference number: 5 (lower is better)
Translates to: ESSWPCTSRSPLQPD*SQWLDALPMGVQDY
Trigger: ATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAGACCTGGAAGTACAAGGCCAAGAACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp TGGCCTTGTACTTCCAGGTCTCCACTCCAGCCTGACTGCTCTCAATaGCTTGATGCTCTGCCGATGGGAGTTCAAGATTATCTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: WPCTSRSPLQPDCSQ*LDALPMGVQDYLSV
Trigger: GACAGAAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAGACCTGGAAGTACAAGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp CCAGGACATGGATCAGCAGCCTGGCCAGACAGTTCCAGGTGTTCTTTAATGAGGAGGCATTGTCCTCACTaGTGTACTGGCTCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: PGHGSAAWPDSSRCSLMRRHCPH*CTGSRR
Trigger: TCTTCTTGAGCCAGTACACAAGTGAGGACAATGCCT...CCTCATTAAAGAACACCTGGAACTGTCTGGCCAGGCTGCTGATCCATGTCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 90 bp CCAGGTCTCCACTCCAGCCTGACTGCTCTCAATGGCTTGATGCTCTaGCGATGGGAGTTCAAGATTATCTTTCTGTCGCTTCTCAAATTC +
Preference number: 5 (lower is better)
Translates to: PGLHSSLTALNGLML*RWEFKIIFLSLLKF
Trigger: GAATTTGAGAAGCGACAGAAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAGACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 90 bp CTCCACTCCAGCCTGACTGCTCTCAATGGCTTGATGCTCTGCCGATaGGAGTTCAAGATTATCTTTCTGTCGCTTCTCAAATTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LHSSLTALNGLMLCR*EFKIIFLSLLKFLL
Trigger: GAGGAGGAATTTGAGAAGCGACAGAAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TCATGCAATCAAAGCAAGACCCAGGTGTCAGAAAAGTCTGGTGTGCTTAAGGCTAGGGCAGAGCCAAACTaGATGGCAATCTGGCGCATG +
Preference number: 5 (lower is better)
Translates to: SCNQSKTQVSEKSGVLKARAEPN*MAIWRM
Trigger: CATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCT...AGCCTTAAGCACACCAGACTTTTCTGACACCTGGGTCTTGCTTTGATTGCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTGCACGATCTGTGTACTaGCTGGCTGTCCTGCTTACG +
Preference number: 5 (lower is better)
Translates to: FACLQGACTLSFHSTAQAARSVY*LAVLLT
Trigger: CGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGC...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp TTTGCATGTTTGCAGGGAGCCTGCACTCTTTCTTTTCATAGTACAGCTCAGGCTTCCTGGAAGGAGGCATaGTCCTCACTTGTGTACTGG +
Preference number: 5 (lower is better)
Translates to: FACLQGACTLSFHSTAQASWKEA*SSLVYW
Trigger: CCAGTACACAAGTGAGGACAATGCCTCCTTCCAGGA...AGCCTGAGCTGTACTATGAAAAGAAAGAGTGCAGGCTCCCTGCAAACATGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp GAGGAAATGGGTTTATTCAGCTCACACTTTCCATCACAGTCCATCACTGAGGGAAGAGAGTTCTTGGCCTaGTACTTCCAGGTCTCCACT +
Preference number: 5 (lower is better)
Translates to: EEMGLFSSHFPSQSITEGREFLA*YFQVST
Trigger: AGTGGAGACCTGGAAGTACAAGGCCAAGAACTCTCT...TCCCTCAGTGATGGACTGTGATGGAAAGTGTGAGCTGAATAAACCCATTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS-3UTR CAA 90 bp ACACTAGATATTTGTGGCTCCTGGAATAATCAACTGTGGTCTGTGTCTCCAAGGAGGCATTGTCCTCACTaGTGTACTGGCTCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: TLDICGSWNNQLWSVSPRRHCPH*CTGSRR
Trigger: TCTTCTTGAGCCAGTACACAAGTGAGGACAATGCCT...CCTTGGAGACACAGACCACAGTTGATTATTCCAGGAGCCACAAATATCTAGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 72 bp TCCGGCCTCTCCAGCCTCCCCAGCCGCGCGCTTCCTTaGGGGCGCGGACGCGGAGGACAGAAACAGAGCACC +
Preference number: 6 (lower is better)
Translates to: SGLSSLPSRALP*GRGRGGQKQST
Trigger: GGTGCTCTGTTTCTGTCCTCCGCGTCCGCGCCCTCAAGGAAGCGCGCGGCTGGGGAGGCTGGAGAGGCCGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp CTCCGGCCTCTCCAGCCTCCCCAGCCGCGCGCTTCCTaGAGGGCGCGGACGCGGAGGACAGAAACAGAGCAC +
Preference number: 6 (lower is better)
Translates to: LRPLQPPQPRAS*RARTRRTETEH
Trigger: GTGCTCTGTTTCTGTCCTCCGCGTCCGCGCCCTCAAGGAAGCGCGCGGCTGGGGAGGCTGGAGAGGCCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 72 bp CGGCCCACCAGCTGGGGTCTTGAGGTGGGAAGATCGTaGTGGGGATGGTGTATAGCTGGCCCGCAGGGCACG +
Preference number: 6 (lower is better)
Translates to: RPTSWGLEVGRS*WGWCIAGPQGT
Trigger: CGTGCCCTGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp CTGTGTGAGGGGTGTGCGTGTAGCAGACCCAGGGGCTaGAGTGCTTGTGGGTGTCTGCGGCCCACCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LCEGCACSRPRG*SACGCLRPTSW
Trigger: CCAGCTGGTGGGCCGCAGACACCCACAAGCACTCCAGCCCCTGGGTCTGCTACACGCACACCCCTCACACAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp TCTCCAGCCTCTCCTGCATCATCTAGGTCTCGGCCCTaGGGCCGGGGCTTGTTGCCCAGCACAGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: SPASPASSRSRP*GRGLLPSTAEP
Trigger: AGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGCAGGAGAGGCTGGAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000003621.10
CDS CCA 72 bp GGCTGGAGTGCTTGTGGGTGTCTGCGGCCCACCAGCTaGGGTCTTGAGGTGGGAAGATCGTGCTGGGGATGG +
Preference number: 6 (lower is better)
Translates to: GWSACGCLRPTS*GLEVGRSCWGW
Trigger: CCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGGCCGCAGACACCCACAAGCACTCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp TCCTCTCCAGCCTCTCCATCATCTAGGTCTCGGCCCTaGGGCCGGGGCTTGTTGCCCAGCACAGCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: SSPASPSSRSRP*GRGLLPSTAEP
Trigger: AGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGGAGAGGCTGGAGAGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232423.2
CDS CAA 72 bp GCATCATCTAGGTCTCGGCCCTGGGGCCGGGGCTTGTaGCCCAGCACAGCAGAGCCTGGGTGTACCTCAGGA +
Preference number: 6 (lower is better)
Translates to: ASSRSRPWGRGL*PSTAEPGCTSG
Trigger: TCCTGAGGTACACCCAGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003621.10
CDS CAA 72 bp CCTGCATCATCTAGGTCTCGGCCCTGGGGCCGGGGCTaGTTGCCCAGCACAGCAGAGCCTGGGTGTACCTCA +
Preference number: 6 (lower is better)
Translates to: PASSRSRPWGRG*LPSTAEPGCTS
Trigger: TGAGGTACACCCAGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGCAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000003621.10
CDS CAA 72 bp CCGCCCACTCTGGGGGACTCCTGGGGAATGAGTTCCTaGCCGTCAGGGCCGACCTTGCCCTGTTTGTGCTGG +
Preference number: 6 (lower is better)
Translates to: PPTLGDSWGMSS*PSGPTLPCLCW
Trigger: CCAGCACAAACAGGGCAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGTGGGCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp CCATCATCTAGGTCTCGGCCCTGGGGCCGGGGCTTGTaGCCCAGCACAGCAGAGCCTGGGTGTACCTCAGGA +
Preference number: 6 (lower is better)
Translates to: PSSRSRPWGRGL*PSTAEPGCTSG
Trigger: TCCTGAGGTACACCCAGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232423.2
CDS GCA 72 bp CCCGCAGGGCACGATCTGTGTACTTGCTGGCTGTCCTaGTTACGAGGCGCTGTAGGGCTGGGGACATGGCTG +
Preference number: 6 (lower is better)
Translates to: PAGHDLCTCWLS*LRGAVGLGTWL
Trigger: CAGCCATGTCCCCAGCCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGCCCTGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp CCCACCAGCTGGGGTCTTGAGGTGGGAAGATCGTGCTaGGGATGGTGTATAGCTGGCCCGCAGGGCACGATC +
Preference number: 6 (lower is better)
Translates to: PTSWGLEVGRSC*GWCIAGPQGTI
Trigger: GATCGTGCCCTGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCTGGTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp TCCTGGGGAATGAGTTCCTTGCCGTCAGGGCCGACCTaGCCCTGTTTGTGCTGGGCATTGAGGGCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: SWGMSSLPSGPT*PCLCWALRAAA
Trigger: GGCGGCTGCCCTCAATGCCCAGCACAAACAGGGCAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp TCTCCATCATCTAGGTCTCGGCCCTGGGGCCGGGGCTaGTTGCCCAGCACAGCAGAGCCTGGGTGTACCTCA +
Preference number: 6 (lower is better)
Translates to: SPSSRSRPWGRG*LPSTAEPGCTS
Trigger: TGAGGTACACCCAGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGGAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232423.2
CDS CAA 90 bp CGCAACGCTTCCTGCTTCTTCGCCCGGTTTTTGGCAGCCGCTTCATaGGCCATCTTCAGGCCCAGACGCTCCCTGCGTCCTGGCTCCAAG +
Preference number: 6 (lower is better)
Translates to: RNASCFFARFLAAAS*AIFRPRRSLRPGSK
Trigger: CTTGGAGCCAGGACGCAGGGAGCGTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 90 bp CCAGCCTCTCCATCATCTAGGTCTCGGCCCTGGGGCCGGGGCTTGTaGCCCAGCACAGCAGAGCCTGGGTGTACCTCAGGAGTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: PASPSSRSRPWGRGL*PSTAEPGCTSGVSK
Trigger: CTTTGAAACTCCTGAGGTACACCCAGGCTCTGCTGTGCTGGGCAACAAGCCCCGGCCCCAGGGCCGAGACCTAGATGATGGAGAGGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232423.2
CDS TCA 72 bp ATCCAAAGCCGCCCACTCTGGGGGACTCCTGGGGAATaGGTTCCTTGCCGTCAGGGCCGACCTTGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: IQSRPLWGTPGE*VPCRQGRPCPV
Trigger: AACAGGGCAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGTGGGCGGCTTTGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 72 bp GGCCCAGACGCTCCCTGCGTCCTGGCTCCAAGATCTTaGATGTGGGTCCAGGTGTCCTGTCCACATAGGGGC +
Preference number: 6 (lower is better)
Translates to: GPDAPCVLAPRS*MWVQVSCPHRG
Trigger: GCCCCTATGTGGACAGGACACCTGGACCCACATTCAAGATCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp CCTGCTTCTTCGCCCGGTTTTTGGCAGCCGCTTCATTaGCCATCTTCAGGCCCAGACGCTCCCTGCGTCCTG +
Preference number: 6 (lower is better)
Translates to: PASSPGFWQPLH*PSSGPDAPCVL
Trigger: CAGGACGCAGGGAGCGTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp TATAGCTGGCCCGCAGGGCACGATCTGTGTACTTGCTaGCTGTCCTGCTTACGAGGCGCTGTAGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: YSWPAGHDLCTC*LSCLRGAVGLG
Trigger: CCCCAGCCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGCCCTGCGGGCCAGCTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 90 bp AATCCAAAGCCGCCCACTCTGGGGGACTCCTGGGGAATGAGTTCCTaGCCGTCAGGGCCGACCTTGCCCTGTTTGTGCTGGGCATTGAGG +
Preference number: 6 (lower is better)
Translates to: NPKPPTLGDSWGMSS*PSGPTLPCLCWALR
Trigger: CCTCAATGCCCAGCACAAACAGGGCAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGTGGGCGGCTTTGGATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 72 bp AGTCCCTCGATGTACTCTTCTTCATCCAGGACCCGCTaGCTGCTTCTCGCAACTCCGGCCTCTCCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SPSMYSSSSRTR*LLLATPASPAS
Trigger: GGAGGCTGGAGAGGCCGGAGTTGCGAGAAGCAGGCAGCGGGTCCTGGATGAAGAAGAGTACATCGAGGGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 72 bp GTGTATAGCTGGCCCGCAGGGCACGATCTGTGTACTTaGTGGCTGTCCTGCTTACGAGGCGCTGTAGGGCTG +
Preference number: 6 (lower is better)
Translates to: VYSWPAGHDLCT*WLSCLRGAVGL
Trigger: CAGCCCTACAGCGCCTCGTAAGCAGGACAGCCAGCAAGTACACAGATCGTGCCCTGCGGGCCAGCTATACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp GCAACAAATCCAAAGCCGCCCACTCTGGGGGACTCCTaGGGAATGAGTTCCTTGCCGTCAGGGCCGACCTTG +
Preference number: 6 (lower is better)
Translates to: ATNPKPPTLGDS*GMSSLPSGPTL
Trigger: CAAGGTCGGCCCTGACGGCAAGGAACTCATTCCCCAGGAGTCCCCCAGAGTGGGCGGCTTTGGATTTGTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp TCCTGCTTCTTCGCCCGGTTTTTGGCAGCCGCTTCATaGGCCATCTTCAGGCCCAGACGCTCCCTGCGTCCT +
Preference number: 6 (lower is better)
Translates to: SCFFARFLAAAS*AIFRPRRSLRP
Trigger: AGGACGCAGGGAGCGTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp TCTGAAGCTTTGCGTCGGGCAGGGAGCTGCAGCAGGTaGTCTGTGATGGAGGCTGGGTCCTGTGTGAGGGGT +
Preference number: 6 (lower is better)
Translates to: SEALRRAGSCSR*SVMEAGSCVRG
Trigger: ACCCCTCACACAGGACCCAGCCTCCATCACAGACAACCTGCTGCAGCTCCCTGCCCGACGCAAAGCTTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp CTCTCCGCAACGCTTCCTGCTTCTTCGCCCGGTTTTTaGCAGCCGCTTCATTGGCCATCTTCAGGCCCAGAC +
Preference number: 6 (lower is better)
Translates to: LSATLPASSPGF*QPLHWPSSGPD
Trigger: GTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp AGCTGGGGTCTTGAGGTGGGAAGATCGTGCTGGGGATaGTGTATAGCTGGCCCGCAGGGCACGATCTGTGTA +
Preference number: 6 (lower is better)
Translates to: SWGLEVGRSCWG*CIAGPQGTICV
Trigger: TACACAGATCGTGCCCTGCGGGCCAGCTATACACCATCCCCAGCACGATCTTCCCACCTCAAGACCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 90 bp TTCTCTGTAACTCTCCGCAACGCTTCCTGCTTCTTCGCCCGGTTTTaGGCAGCCGCTTCATTGGCCATCTTCAGGCCCAGACGCTCCCTG +
Preference number: 6 (lower is better)
Translates to: FSVTLRNASCFFARF*AAASLAIFRPRRSL
Trigger: CAGGGAGCGTCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAGAGTTACAGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp ATTGGCCATCTTCAGGCCCAGACGCTCCCTGCGTCCTaGCTCCAAGATCTTGAATGTGGGTCCAGGTGTCCT +
Preference number: 6 (lower is better)
Translates to: IGHLQAQTLPAS*LQDLECGSRCP
Trigger: AGGACACCTGGACCCACATTCAAGATCTTGGAGCCAGGACGCAGGGAGCGTCTGGGCCTGAAGATGGCCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp ACTCTCCGCAACGCTTCCTGCTTCTTCGCCCGGTTTTaGGCAGCCGCTTCATTGGCCATCTTCAGGCCCAGA +
Preference number: 6 (lower is better)
Translates to: TLRNASCFFARF*AAASLAIFRPR
Trigger: TCTGGGCCTGAAGATGGCCAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 90 bp GGTGGTGGAGGTTCCCGAGATATCTTGCCCAGGGCAGAGCCAAACTaGATGGCAATCTGGCGCATGCGCTCCAAATCTCCGTTTTCCTCG +
Preference number: 6 (lower is better)
Translates to: GGGGSRDILPRAEPN*MAIWRMRSKSPFSS
Trigger: CGAGGAAAACGGAGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAACCTCCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp ATCTTGCCCAGGGCAGAGCCAAACTTGATGGCAATCTaGCGCATGCGCTCCAAATCTCCGTTTTCCTCGGCC +
Preference number: 6 (lower is better)
Translates to: ILPRAEPNLMAI*RMRSKSPFSSA
Trigger: GGCCGAGGAAAACGGAGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCTGGGCAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp GGTTCCCGAGATATCTTGCCCAGGGCAGAGCCAAACTaGATGGCAATCTGGCGCATGCGCTCCAAATCTCCG +
Preference number: 6 (lower is better)
Translates to: GSRDILPRAEPN*MAIWRMRSKSP
Trigger: CGGAGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 72 bp GTTCCCGAGATATCTTGCCCAGGGCAGAGCCAAACTTaGTGGCAATCTGGCGCATGCGCTCCAAATCTCCGT +
Preference number: 6 (lower is better)
Translates to: VPEISCPGQSQT*WQSGACAPNLR
Trigger: ACGGAGATTTGGAGCGCATGCGCCAGATTGCCATCAAGTTTGGCTCTGCCCTGGGCAAGATATCTCGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 72 bp CTGGCCAAGTTCTCTGTAACTCTCCGCAACGCTTCCTaGTTCTTCGCCCGGTTTTTGGCAGCCGCTTCATTG +
Preference number: 6 (lower is better)
Translates to: LAKFSVTLRNAS*FFARFLAAASL
Trigger: CAATGAAGCGGCTGCCAAAAACCGGGCGAAGAAGCAGGAAGCGTTGCGGAGAGTTACAGAGAACTTGGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp AGGAGTTTCAAAGGTGGCTGGAGTAACATAGGGTGGTaGAGGTTCCCGAGATATCTTGCCCAGGGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: RSFKGGWSNIGW*RFPRYLAQGRA
Trigger: GGCTCTGCCCTGGGCAAGATATCTCGGGAACCTCCACCACCCTATGTTACTCCAGCCACCTTTGAAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp ATCTCCTGGAAGGAGGCATTGTCCTCACTTGTGTACTaGCTCAAGAAGACATCCAGGCTGGGCAGTGGCTCC +
Preference number: 6 (lower is better)
Translates to: ISWKEALSSLVY*LKKTSRLGSGS
Trigger: GGAGCCACTGCCCAGCCTGGATGTCTTCTTGAGCCAGTACACAAGTGAGGACAATGCCTCCTTCCAGGAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp CTCAGGAGTTTCAAAGGTGGCTGGAGTAACATAGGGTaGTGGAGGTTCCCGAGATATCTTGCCCAGGGCAGA +
Preference number: 6 (lower is better)
Translates to: LRSFKGGWSNIG*WRFPRYLAQGR
Trigger: TCTGCCCTGGGCAAGATATCTCGGGAACCTCCACCACCCTATGTTACTCCAGCCACCTTTGAAACTCCTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp AGAGCCTGGGTGTACCTCAGGAGTTTCAAAGGTGGCTaGAGTAACATAGGGTGGTGGAGGTTCCCGAGATAT +
Preference number: 6 (lower is better)
Translates to: RAWVYLRSFKGG*SNIGWWRFPRY
Trigger: ATATCTCGGGAACCTCCACCACCCTATGTTACTCCAGCCACCTTTGAAACTCCTGAGGTACACCCAGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp ACTTCCAGGTCTCCACTCCAGCCTGACTGCTCTCAATaGCTTGATGCTCTGCCGATGGGAGTTCAAGATTAT +
Preference number: 6 (lower is better)
Translates to: TSRSPLQPDCSQ*LDALPMGVQDY
Trigger: ATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAGACCTGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 72 bp CCAGGTCTCCACTCCAGCCTGACTGCTCTCAATGGCTaGATGCTCTGCCGATGGGAGTTCAAGATTATCTTT +
Preference number: 6 (lower is better)
Translates to: PGLHSSLTALNG*MLCRWEFKIIF
Trigger: AAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAGACCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CAA 90 bp CTTGTACTTCCAGGTCTCCACTCCAGCCTGACTGCTCTCAATGGCTaGATGCTCTGCCGATGGGAGTTCAAGATTATCTTTCTGTCGCTT +
Preference number: 6 (lower is better)
Translates to: LVLPGLHSSLTALNG*MLCRWEFKIIFLSL
Trigger: AAGCGACAGAAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTGGAGACCTGGAAGTACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS GCA 72 bp CACTCCAGCCTGACTGCTCTCAATGGCTTGATGCTCTaGCGATGGGAGTTCAAGATTATCTTTCTGTCGCTT +
Preference number: 6 (lower is better)
Translates to: HSSLTALNGLML*RWEFKIIFLSL
Trigger: AAGCGACAGAAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCTGGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS TCA 72 bp TCCACATCAGGGAAGAAGTCTCTCTGGATAACTGTCTaGAGTCCCTCGATGTACTCTTCTTCATCCAGGACC +
Preference number: 6 (lower is better)
Translates to: STSGKKSLWITV*SPSMYSSSSRT
Trigger: GGTCCTGGATGAAGAAGAGTACATCGAGGGACTTCAGACAGTTATCCAGAGAGACTTCTTCCCTGATGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2
CDS CCA 72 bp AGCCTGACTGCTCTCAATGGCTTGATGCTCTGCCGATaGGAGTTCAAGATTATCTTTCTGTCGCTTCTCAAA +
Preference number: 6 (lower is better)
Translates to: SLTALNGLMLCR*EFKIIFLSLLK
Trigger: TTTGAGAAGCGACAGAAAGATAATCTTGAACTCCCATCGGCAGAGCATCAAGCCATTGAGAGCAGTCAGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000003621.10
ENSMUST00000232423.2