Pregenerated sensors for ESRRG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026610Ensembl transcript IDs: ENSMUST00000027906.13, ENSMUST00000110938.2, ENSMUST00000110939.8, ENSMUST00000127489.8
Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTCGTGGATaGGACCACTCGGTGTCACGGCAGGTATCATCTAATCCTTGGTGT | + |
Preference number: 1 (lower is better) Translates to: GANSTDRDPMCSARG*DHSVSRQVSSNPWC Trigger: ACACCAAGGATTAGATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR GCA 90 bp | ATGGCTGTAACTGATCTAGATGAGAAAGCAAGGAGAAGCAGCCAATaGCGCCACTTAGGTTGTCTGATCGAAGGCTGCCCGGTAGAATCT | + |
Preference number: 1 (lower is better) Translates to: MAVTDLDEKARRSSQ*RHLGCLIEGCPVES Trigger: AGATTCTACCGGGCAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTCTCATCTAGATCAGTTACAGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 90 bp | TGTACCTCCTTCCTTAAATGTGCCTCTGTCTCACCTGATCACTTGTaGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTG | + |
Preference number: 1 (lower is better) Translates to: CTSFLKCASVSPDHL*ALASEAQILLCDSV Trigger: CACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACATTTAAGGAAGGAGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 90 bp | AACACTGGTCCATTGGTAAAGCGTTCTACGGAGGTTACTGGTTTCTaGTTATTCGGCGACTGTAGGTTTCGGGAGGGGACATTTGATTTC | + |
Preference number: 1 (lower is better) Translates to: NTGPLVKRSTEVTGF*LFGDCRFREGTFDF Trigger: GAAATCAAATGTCCCCTCCCGAAACCTACAGTCGCCGAATAACCAGAAACCAGTAACCTCCGTAGAACGCTTTACCAATGGACCAGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 90 bp | TTGGTCAGGCGTCTGCTGTCTTTGATGGTTGGTTGGTTTGAATTCTaGCACTTAGCCTTTATTGCCTCTGAAATGGTATTGGCTCACAGC | + |
Preference number: 1 (lower is better) Translates to: LVRRLLSLMVGWFEF*HLAFIASEMVLAHS Trigger: GCTGTGAGCCAATACCATTTCAGAGGCAATAAAGGCTAAGTGCCAGAATTCAAACCAACCAACCATCAAAGACAGCAGACGCCTGACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | TGTCTGATCGAAGGCTGCCCGGTAGAATCTAATACTGCACTAAGTTaGTCCGTTTGCGTTGCAATGTACTTTAGGTACGGTTCTCTCTTT | + |
Preference number: 1 (lower is better) Translates to: CLIEGCPVESNTALS*SVCVAMYFRYGSLF Trigger: AAAGAGAGAACCGTACCTAAAGTACATTGCAACGCAAACGGATCAACTTAGTGCAGTATTAGATTCTACCGGGCAGCCTTCGATCAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 90 bp | TTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATaGTTCATGACAAGTTCACTGGCATCCATAGTATGGATCTCTGTC | + |
Preference number: 1 (lower is better) Translates to: LGTVLSLIPYSLGMS*FMTSSLASIVWISV Trigger: GACAGAGATCCATACTATGGATGCCAGTGAACTTGTCATGAACCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | TGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTaGAACGGTGGGTACATACATTGTCTATATTCCATTTGTGTATAT | + |
Preference number: 1 (lower is better) Translates to: CGLWLLKLRFFSATQ*NGGYIHCLYSICVY Trigger: ATATACACAAATGGAATATAGACAATGTATGTACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | AGAGATGCAAGAGGTAAAAGAAATGTTCCATACAATCAGAGGTATTaGCTATGTACGCAGAGTGGGAGGAGATGTGAGAAAGCGAAGAGA | + |
Preference number: 1 (lower is better) Translates to: RDARGKRNVPYNQRY*LCTQSGRRCEKAKR Trigger: TCTCTTCGCTTTCTCACATCTCCTCCCACTCTGCGTACATAGTCAATACCTCTGATTGTATGGAACATTTCTTTTACCTCTTGCATCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | CACACCACAAGAATCCAAACACCACGAGAACAAGACGACAGTTTCTaGATGCAACATAAAGTTCAGAAAAGCGCAGCAAACATGGAACAT | + |
Preference number: 1 (lower is better) Translates to: HTTRIQTPREQDDSF*MQHKVQKSAANMEH Trigger: ATGTTCCATGTTTGCTGCGCTTTTCTGAACTTTATGTTGCATTCAGAAACTGTCGTCTTGTTCTCGTGGTGTTTGGATTCTTGTGGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR GCA 90 bp | TGTAAGAAACTGATGTTTGGGACCAGACTGGCACACAACATAAATTaGATCCGTGGTAATATGCACCTTCCCTTCAACTATTGCTTGAGT | + |
Preference number: 1 (lower is better) Translates to: CKKLMFGTRLAHNIN*IRGNMHLPFNYCLS Trigger: ACTCAAGCAATAGTTGAAGGGAAGGTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACATCAGTTTCTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | GAGGGGACATTTGATTTCTTCATTAGATTACACCTGGTTACAGTCTaGAACCTGACTGACCTTCGTGCTGTGACCATACTTGTTGAAAAA | + |
Preference number: 1 (lower is better) Translates to: EGTFDFFIRLHLVTV*NLTDLRAVTILVEK Trigger: TTTTTCAACAAGTATGGTCACAGCACGAAGGTCAGTCAGGTTTCAGACTGTAACCAGGTGTAATCTAATGAAGAAATCAAATGTCCCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR GCA 90 bp | CCACAAGAATCCAAACACCACGAGAACAAGACGACAGTTTCTGAATaGAACATAAAGTTCAGAAAAGCGCAGCAAACATGGAACATTGAA | + |
Preference number: 1 (lower is better) Translates to: PQESKHHENKTTVSE*NIKFRKAQQTWNIE Trigger: TTCAATGTTCCATGTTTGCTGCGCTTTTCTGAACTTTATGTTGCATTCAGAAACTGTCGTCTTGTTCTCGTGGTGTTTGGATTCTTGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR GCA 90 bp | AAACTTTGCTCGAGCAAGGTACAAATGGTATTTACCCTAAACCTGTaGGTTTCCTTTAGATCCACACTTGAAGCTGTTGTTGTTTTCACC | + |
Preference number: 1 (lower is better) Translates to: KLCSSKVQMVFTLNL*VSFRSTLEAVVVFT Trigger: GGTGAAAACAACAACAGCTTCAAGTGTGGATCTAAAGGAAACGCACAGGTTTAGGGTAAATACCATTTGTACCTTGCTCGAGCAAAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | ACCAAAAAGGTTTGCAACAACACAGAGCGAGTTAATAACAACATCTaGGAGATGATCAGGTGGAAGCCTTATATACAGCATTTAAAAATT | + |
Preference number: 1 (lower is better) Translates to: TKKVCNNTERVNNNI*EMIRWKPYIQHLKI Trigger: AATTTTTAAATGCTGTATATAAGGCTTCCACCTGATCATCTCTCAGATGTTGTTATTAACTCGCTCTGTGTTGTTGCAAACCTTTTTGGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 90 bp | CTAATGATGATTTACCTAGAGTCACACTACAGTCACTTTCTCTACTaGGAACCACAATCTACGATATATTCCCATATAGCTAATGATAGA | + |
Preference number: 1 (lower is better) Translates to: LMMIYLESHYSHFLY*EPQSTIYSHIANDR Trigger: TCTATCATTAGCTATATGGGAATATATCGTAGATTGTGGTTCTCAGTAGAGAAAGTGACTGTAGTGTGACTCTAGGTAAATCATCATTAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 90 bp | ACAGTTTCTGAATGCAACATAAAGTTCAGAAAAGCGCAGCAAACATaGAACATTGAAGCTGAACTATTCTTTTGTTTGTTAGGAGTACAA | + |
Preference number: 1 (lower is better) Translates to: TVSECNIKFRKAQQT*NIEAELFFCLLGVQ Trigger: TTGTACTCCTAACAAACAAAAGAATAGTTCAGCTTCAATGTTCCATGTTTGCTGCGCTTTTCTGAACTTTATGTTGCATTCAGAAACTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATCTTCCCTTTTCAACGTaGAGGATGGGAGGGCCCAGG | + |
Preference number: 2 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHLPFST*RMGGPR Trigger: CCTGGGCCCTCCCATCCTGCACGTTGAAAAGGGAAG...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR GCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGCTTCCCTTTTCAACGTaGAGGATGGGAGGGCCCAGG | + |
Preference number: 2 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLLPFST*RMGGPR Trigger: CCTGGGCCCTCCCATCCTGCACGTTGAAAAGGGAAG...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR GCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCCCTTTTCAACGTaGAGGATGGGAGGGCCCAGG | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQILPFST*RMGGPR Trigger: CCTGGGCCCTCCCATCCTGCACGTTGAAAAGGGAAG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGTGGCCAGAGGATCGTaGGATAAAGTAGAGGAAACC | + |
Preference number: 2 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHVARGS*DKVEET Trigger: GGTTTCCTCTACTTTATCCCACGATCCTCTGGCCAC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGGCTGCATCGTACTGTaGCTGCTAAAATATCAGTGC | + |
Preference number: 2 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHGCIVL*LLKYQC Trigger: GCACTGATATTTTAGCAGCCACAGTACGATGCAGCC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGAGGAATGCAGGGATGTaGCCAGAGGATCGTGGGATA | + |
Preference number: 2 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLRNAGM*PEDRGI Trigger: TATCCCACGATCCTCTGGCCACATCCCTGCATTCCT...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 90 bp | GGCTCACAGCTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTaGTTCCTAACCACGAGGGCAGCTAGAAACCGTATGGCGACTGTC | + |
Preference number: 2 (lower is better) Translates to: GSQLLLRQSLYTGSI*FLTTRAARNRMATV Trigger: GACAGTCGCCATACGGTTTCTAGCTGCCCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAGCTGTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGGGGAGGAGGGAAAATaGACTATTAGTGAAAGAAGC | + |
Preference number: 2 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHGEEGK*TISERS Trigger: GCTTCTTTCACTAATAGTTCATTTTCCCTCCTCCCC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAAGGAATGCAGGGATGTaGCCAGAGGATCGTGGGATA | + |
Preference number: 2 (lower is better) Translates to: ALASEAQILLCDSVKRWVRNAGM*PEDRGI Trigger: TATCCCACGATCCTCTGGCCACATCCCTGCATTCCT...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTTGGATCTCTGTCCTTTaGCAGGGCTGGCTTCCATCT | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQIWISVL*QGWLPS Trigger: AGATGGAAGCCAGCCCTGCCAAAGGACAGAGATCCA...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGGGATGTCATGGTTCATaGCAAGTTCACTGGCATCCA | + |
Preference number: 2 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLGCHGS*QVHWHP Trigger: TGGATGCCAGTGAACTTGTCATGAACCATGACATCC...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTACACCTGGTTACAGTCTaGAACCTGACTGACCTTCGT | + |
Preference number: 2 (lower is better) Translates to: ALASEAQILLCDSVKRWVHLVTV*NLTDLR Trigger: ACGAAGGTCAGTCAGGTTTCAGACTGTAACCAGGTG...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTGTGGCCAGAGGATCGTaGGATAAAGTAGAGGAAACC | + |
Preference number: 2 (lower is better) Translates to: AGRCTGANSTDRDPMCSAVARGS*DKVEET Trigger: GGTTTCCTCTACTTTATCCCACGATCCTCTGGCCAC...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGGAAAGCGAAGAGAGGTaGGAGCAAGGCAAGAGGAGA | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRESEER*EQGKRR Trigger: TCTCCTCTTGCCTTGCTCTCACCTCTCTTCGCTTTC...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGTACGGTTCTCTCTTTaGTTCCTTACTCACTGGGGA | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQIVRFSL*FLTHWG Trigger: TCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTAC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTGTACGGTTCTCTCTTTaGTTCCTTACTCACTGGGGA | + |
Preference number: 2 (lower is better) Translates to: AGRCTGANSTDRDPMCSAVRFSL*FLTHWG Trigger: TCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTAC...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAGCTCACAGCTCCTTCTaGGACAGAGTTTGTATACAG | + |
Preference number: 2 (lower is better) Translates to: ALASEAQILLCDSVKRWVAHSSF*DRVCIQ Trigger: CTGTATACAAACTCTGTCTCAGAAGGAGCTGTGAGC...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGCTCACAGCTCCTTCTaGGACAGAGTTTGTATACAG | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQIAHSSF*DRVCIQ Trigger: CTGTATACAAACTCTGTCTCAGAAGGAGCTGTGAGC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGGCTGCATCGTACTGTaGCTGCTAAAATATCAGTGC | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQIGCIVL*LLKYQC Trigger: GCACTGATATTTTAGCAGCCACAGTACGATGCAGCC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGAGGAATGCAGGGATGTaGCCAGAGGATCGTGGGATA | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRRNAGM*PEDRGI Trigger: TATCCCACGATCCTCTGGCCACATCCCTGCATTCCT...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGCTGGCATCCATAGTATaGATCTCTGTCCTTTGGCAG | + |
Preference number: 2 (lower is better) Translates to: SHLITCGLWLLKLRFFSALASIV*ISVLWQ Trigger: CTGCCAAAGGACAGAGATCCATACTATGGATGCCAG...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCCTCTGAAATGGTATTaGCTCACAGCTCCTTCTGAG | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQIPLKWY*LTAPSE Trigger: CTCAGAAGGAGCTGTGAGCCAATACCATTTCAGAGG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 90 bp | CATTGTACCTCCTTCCTTAAATGTGCCTCTGTCTCACCTGATCACTaGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCA | + |
Preference number: 2 (lower is better) Translates to: HCTSFLKCASVSPDH*WALASEAQILLCDS Trigger: TGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACATTTAAGGAAGGAGGTACAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR TCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGGGATGTCATGGTTCATaGCAAGTTCACTGGCATCCA | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRGCHGS*QVHWHP Trigger: TGGATGCCAGTGAACTTGTCATGAACCATGACATCC...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR GCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTGCATCCGTGGTAATATaGACCTTCCCTTCAACTATT | + |
Preference number: 2 (lower is better) Translates to: AGRCTGANSTDRDPMCSAASVVI*TFPSTI Trigger: AATAGTTGAAGGGAAGGTGCATATTACCACGGATGC...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR GCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAGGATCCCATGTGCAGTaGTCGTGGATGGGACCACTC | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQGSHVQ*SWMGPL Trigger: GAGTGGTCCCATCCACGAGCACTGCACATGGGATCC...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGGGCTGCATCGTACTGTaGCTGCTAAAATATCAGTGC | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRGCIVL*LLKYQC Trigger: GCACTGATATTTTAGCAGCCACAGTACGATGCAGCC...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTTATTGCCTCTGAAATaGTATTGGCTCACAGCTCCT | + |
Preference number: 2 (lower is better) Translates to: SHLITCGLWLLKLRFFSALLPLK*YWLTAP Trigger: AGGAGCTGTGAGCCAATACCATTTCAGAGGCAATAA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CAA 90 bp | AAGACTGTCCACAGAATACAGAGAGCAGCTACTAACACTGGTCCATaGGTAAAGCGTTCTACGGAGGTTACTGGTTTCTGGTTATTCGGC | + |
Preference number: 2 (lower is better) Translates to: KTVHRIQRAATNTGP*VKRSTEVTGFWLFG Trigger: GCCGAATAACCAGAAACCAGTAACCTCCGTAGAACGCTTTACCAATGGACCAGTGTTAGTAGCTGCTCTCTGTATTCTGTGGACAGTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTGTGACCATACTTGTTaGAAAAGCACATCTATTGGC | + |
Preference number: 2 (lower is better) Translates to: SHLITCGLWLLKLRFFSACDHTC*KSTSIG Trigger: GCCAATAGATGTGCTTTTTCAACAAGTATGGTCACA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGCAAGACGACAGTTTCTaGATGCAACATAAAGTTCAG | + |
Preference number: 2 (lower is better) Translates to: SHLITCGLWLLKLRFFSAQDDSF*MQHKVQ Trigger: CTGAACTTTATGTTGCATTCAGAAACTGTCGTCTTG...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTACTGTAGTCTCCTaGGGAAGTATACATCCAATA | + |
Preference number: 2 (lower is better) Translates to: SHLITCGLWLLKLRFFSATTVVS*GSIHPI Trigger: TATTGGATGTATACTTCCTCAGGAGACTACAGTAGT...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTAGTCACTTTCTCTACTaGGAACCACAATCTACGATA | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQISHFLY*EPQSTI Trigger: TATCGTAGATTGTGGTTCTCAGTAGAGAAAGTGACT...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR GCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGCACACAACATAAATTaGATCCGTGGTAATATGCAC | + |
Preference number: 2 (lower is better) Translates to: CASVSPDHLWALASEAQIAHNIN*IRGNMH Trigger: GTGCATATTACCACGGATGCAATTTATGTTGTGTGC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAGAAAGCGAAGAGAGGTaGGAGCAAGGCAAGAGGAGA | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQESEER*EQGKRR Trigger: TCTCCTCTTGCCTTGCTCTCACCTCTCTTCGCTTTC...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGAATCCTTGGTGTCAGTaGACATTTAGGCAAACTGGA | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRNPWCQ*TFRQTG Trigger: TCCAGTTTGCCTAAATGTTCACTGACACCAAGGATT...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATATTCCTAGCACAGGGCTaGGACACCCTCAGTCCAAGG | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNIFLAQG*DTLSPR Trigger: CCTTGGACTGAGGGTGTCTCAGCCCTGTGCTAGGAA...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR GCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGGCATCCGTGGTAATATaGACCTTCCCTTCAACTATT | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRASVVI*TFPSTI Trigger: AATAGTTGAAGGGAAGGTGCATATTACCACGGATGC...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAATGGATCTCTGTCCTTTaGCAGGGCTGGCTTCCATCT | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQWISVL*QGWLPS Trigger: AGATGGAAGCCAGCCCTGCCAAAGGACAGAGATCCA...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACCTGGCATCCATAGTATaGATCTCTGTCCTTTGGCAG | + |
Preference number: 2 (lower is better) Translates to: MFGTRLAHNINCIRGNMHLASIV*ISVLWQ Trigger: CTGCCAAAGGACAGAGATCCATACTATGGATGCCAG...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGGTGAATCGACTCCTATaGATCAGGACTTTAGAATTT | + |
Preference number: 2 (lower is better) Translates to: SHLITCGLWLLKLRFFSAVNRLL*IRTLEF Trigger: AAATTCTAAAGTCCTGATCCATAGGAGTCGATTCAC...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CAA 90 bp | TCAGTCCAAGGTATTTTGCTTAACGCACACAAAGTAGCAATAGTTTaGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAACACAGAGCG | + |
Preference number: 2 (lower is better) Translates to: SVQGILLNAHKVAIV*EASPHQKGLQQHRA Trigger: CGCTCTGTGTTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTGTGCGTTAAGCAAAATACCTTGGACTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAGCTCATGTAAGAAACTaGTGTTTGGGACCAGACTGG | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQAHVRN*CLGPDW Trigger: CCAGTCTGGTCCCAAACATCAGTTTCTTACATGAGC...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR GCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGCTTCCCTTCAACTATTaGTTGAGTAAGTTAAATCCC | + |
Preference number: 2 (lower is better) Translates to: LLLRQSLYTGSILFLTTRLPFNY*LSKLNP Trigger: GGGATTTAACTTACTCAAGCAATAGTTGAAGGGAAG...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAACTGGCATCCATAGTATaGATCTCTGTCCTTTGGCAG | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQLASIV*ISVLWQ Trigger: CTGCCAAAGGACAGAGATCCATACTATGGATGCCAG...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGGAAAGCGAAGAGAGGTaGGAGCAAGGCAAGAGGAGA | + |
Preference number: 2 (lower is better) Translates to: TKELRNQMAVTDLDEKARESEER*EQGKRR Trigger: TCTCCTCTTGCCTTGCTCTCACCTCTCTTCGCTTTC...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAGATGGTTGGTTGGTTTaGATTCTGGCACTTAGCCTT | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQDGWLV*ILALSL Trigger: AAGGCTAAGTGCCAGAATTCAAACCAACCAACCATC...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGTGGATCTCTGTCCTTTaGCAGGGCTGGCTTCCATCT | + |
Preference number: 2 (lower is better) Translates to: TKELRNQMAVTDLDEKARWISVL*QGWLPS Trigger: AGATGGAAGCCAGCCCTGCCAAAGGACAGAGATCCA...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGTACGGTTCTCTCTTTaGTTCCTTACTCACTGGGGA | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNIVRFSL*FLTHWG Trigger: TCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTAC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAAATCCTTGGTGTCAGTaGACATTTAGGCAAACTGGA | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQNPWCQ*TFRQTG Trigger: TCCAGTTTGCCTAAATGTTCACTGACACCAAGGATT...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAACAACATCTGAGAGATaGTCAGGTGGAAGCCTTATA | + |
Preference number: 2 (lower is better) Translates to: HKVAIVLEASPHQKGLQQTTSER*SGGSLI Trigger: TATAAGGCTTCCACCTGATCATCTCTCAGATGTTGT...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR GCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACCTTCCCTTCAACTATTaGTTGAGTAAGTTAAATCCC | + |
Preference number: 2 (lower is better) Translates to: MFGTRLAHNINCIRGNMHLPFNY*LSKLNP Trigger: GGGATTTAACTTACTCAAGCAATAGTTGAAGGGAAG...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGGGGAGGAGGGAAAATaGACTATTAGTGAAAGAAGC | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNIGEEGK*TISERS Trigger: GCTTCTTTCACTAATAGTTCATTTTCCCTCCTCCCC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAAGCCTTTATTGCCTCTaGAATGGTATTGGCTCACAG | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNISLYCL*NGIGSQ Trigger: CTGTGAGCCAATACCATTTCAGAGGCAATAAAGGCT...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
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3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAACAACATCTGAGAGATaGTCAGGTGGAAGCCTTATA | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNITTSER*SGGSLI Trigger: TATAAGGCTTCCACCTGATCATCTCTCAGATGTTGT...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAATTGCTTTACAGATGTaGTGCCCACCTACAGCTATA | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNIIALQM*CPPTAI Trigger: TATAGCTGTAGGTGGGCATCACATCTGTAAAGCAAT...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATATGTGACCATACTTGTTaGAAAAGCACATCTATTGGC | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNICDHTC*KSTSIG Trigger: GCCAATAGATGTGCTTTTTCAACAAGTATGGTCACA...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAAGTCACTTTCTCTACTaGGAACCACAATCTACGATA | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNISHFLY*EPQSTI Trigger: TATCGTAGATTGTGGTTCTCAGTAGAGAAAGTGACT...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR-3UTR GCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGCACACAACATAAATTaGATCCGTGGTAATATGCAC | + |
Preference number: 2 (lower is better) Translates to: TQMDICWSTQYGTHHKNIAHNIN*IRGNMH Trigger: GTGCATATTACCACGGATGCAATTTATGTTGTGTGC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR CAA 90 bp | ATAAATTGCATCCGTGGTAATATGCACCTTCCCTTCAACTATTGCTaGAGTAAGTTAAATCCCCATATTAATAAATGGCTGAAAAGTGGT | + |
Preference number: 2 (lower is better) Translates to: INCIRGNMHLPFNYC*SKLNPHINKWLKSG Trigger: ACCACTTTTCAGCCATTTATTAATATGGGGATTTAACTTACTCAAGCAATAGTTGAAGGGAAGGTGCATATTACCACGGATGCAATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 90 bp | ACTTATCACAGCTATCAATTTCAAGTTATTGACCATCCGAATGAATaGCTAATGATGATTTACCTAGAGTCACACTACAGTCACTTTCTC | + |
Preference number: 2 (lower is better) Translates to: TYHSYQFQVIDHPNE*LMMIYLESHYSHFL Trigger: GAGAAAGTGACTGTAGTGTGACTCTAGGTAAATCATCATTAGCAATTCATTCGGATGGTCAATAACTTGAAATTGATAGCTGTGATAAGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 72 bp | TCTACAGATAGGGATCCCATGTGCAGTGCTCGTGGATaGGACCACTCGGTGTCACGGCAGGTATCATCTAAT | + |
Preference number: 3 (lower is better) Translates to: STDRDPMCSARG*DHSVSRQVSSN Trigger: ATTAGATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGATCCCTATCTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CAA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGATGCCGCCACTTAGGTaGTCTGATCGAAGGCTGCCC | + |
Preference number: 3 (lower is better) Translates to: LLLRQSLYTGSILFLTTRMPPLR*SDRRLP Trigger: GGGCAGCCTTCGATCAGACAACCTAAGTGGCGGCAT...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTGGTACGGTTCTCTCTTaGATTCCTTACTCACTGGGG | + |
Preference number: 3 (lower is better) Translates to: AGRCTGANSTDRDPMCSAGTVLS*IPYSLG Trigger: CCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACC...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGGTACGGTTCTCTCTTaGATTCCTTACTCACTGGGG | + |
Preference number: 3 (lower is better) Translates to: CASVSPDHLWALASEAQIGTVLS*IPYSLG Trigger: CCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATTTCATTAGTGTTCAATaGTTCAAAGCCAGCACGAGG | + |
Preference number: 3 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHFISVQ*FKASTR Trigger: CCTCGTGCTGGCTTTGAACAATTGAACACTAATGAA...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CCA 72 bp | CCATTGGTAAAGCGTTCTACGGAGGTTACTGGTTTCTaGTTATTCGGCGACTGTAGGTTTCGGGAGGGGACA | + |
Preference number: 3 (lower is better) Translates to: PLVKRSTEVTGF*LFGDCRFREGT Trigger: TGTCCCCTCCCGAAACCTACAGTCGCCGAATAACCAGAAACCAGTAACCTCCGTAGAACGCTTTACCAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 72 bp | AATGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTaGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAG | + |
Preference number: 3 (lower is better) Translates to: NVPLSHLITCGL*LLKLRFFSATQ Trigger: CTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACATGCCGCCACTTAGGTaGTCTGATCGAAGGCTGCCC | + |
Preference number: 3 (lower is better) Translates to: MFGTRLAHNINCIRGNMHMPPLR*SDRRLP Trigger: GGGCAGCCTTCGATCAGACAACCTAAGTGGCGGCAT...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTACTAACACTGGTCCATaGGTAAAGCGTTCTACGGAG | + |
Preference number: 3 (lower is better) Translates to: CASVSPDHLWALASEAQITNTGP*VKRSTE Trigger: CTCCGTAGAACGCTTTACCAATGGACCAGTGTTAGT...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTGAGACAGAGTTaGTATACAGGCAGCATCTTG | + |
Preference number: 3 (lower is better) Translates to: CASVSPDHLWALASEAQILLRQS*YTGSIL Trigger: CAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR GCA 72 bp | GAAACCTATCAGGAAGATGTAGCGGAATCCGCAGGCTaGATCGTACTGTGGCTGCTAAAATATCAGTGCAGT | + |
Preference number: 3 (lower is better) Translates to: ETYQEDVAESAG*IVLWLLKYQCS Trigger: ACTGCACTGATATTTTAGCAGCCACAGTACGATGCAGCCTGCGGATTCCGCTACATCTTCCTGATAGGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR GCA 72 bp | TTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTaGGACTCAGTGAAACGGTGGGTACATACATTGTCT | + |
Preference number: 3 (lower is better) Translates to: LWALASEAQILL*DSVKRWVHTLS Trigger: AGACAATGTATGTACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CCA 72 bp | TTCCTTAAATGTGCCTCTGTCTCACCTGATCACTTGTaGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGC | + |
Preference number: 3 (lower is better) Translates to: FLKCASVSPDHL*ALASEAQILLC Trigger: GCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACATTTAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTTTCATTAGTGTTCAATaGTTCAAAGCCAGCACGAGG | + |
Preference number: 3 (lower is better) Translates to: CASVSPDHLWALASEAQIFISVQ*FKASTR Trigger: CCTCGTGCTGGCTTTGAACAATTGAACACTAATGAA...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAAAAGTAGCAATAGTTTaGGAAGCAAGTCCGCACCAA | + |
Preference number: 3 (lower is better) Translates to: ALASEAQILLCDSVKRWVKVAIV*EASPHQ Trigger: TTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTT...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTCTTCGACATCATTCTaGGGTTTATCTTCCCTTTTC | + |
Preference number: 3 (lower is better) Translates to: SHLITCGLWLLKLRFFSASSTSF*GLSSLF Trigger: GAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTTCCTTCAGGGTTCATTaGTCCTTCATTAGTGTTCAA | + |
Preference number: 3 (lower is better) Translates to: CASVSPDHLWALASEAQISFRVH*SFISVQ Trigger: TTGAACACTAATGAAGGACAAATGAACCCTGAAGGA...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTTCGGGAGGGGACATTaGATTTCTTCATTAGATTAC | + |
Preference number: 3 (lower is better) Translates to: SHLITCGLWLLKLRFFSAFGRGH*ISSLDY Trigger: GTAATCTAATGAAGAAATCAAATGTCCCCTCCCGAA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTCAGTCCAAGGTATTTaGCTTAACGCACACAAAGTA | + |
Preference number: 3 (lower is better) Translates to: SHLITCGLWLLKLRFFSASVQGI*LNAHKV Trigger: TACTTTGTGTGCGTTAAGCAAAATACCTTGGACTGA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGATACAATCAGAGGTATaGACTATGTACGCAGAGTGG | + |
Preference number: 3 (lower is better) Translates to: LLLRQSLYTGSILFLTTRIQSEV*TMYAEW Trigger: CCACTCTGCGTACATAGTCAATACCTCTGATTGTAT...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR TCA 72 bp | GAAGGCTGCCCGGTAGAATCTAATACTGCACTAAGTTaGTCCGTTTGCGTTGCAATGTACTTTAGGTACGGT | + |
Preference number: 3 (lower is better) Translates to: EGCPVESNTALS*SVCVAMYFRYG Trigger: ACCGTACCTAAAGTACATTGCAACGCAAACGGATCAACTTAGTGCAGTATTAGATTCTACCGGGCAGCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR TCA 72 bp | GTGTCACGGCAGGTATCATCTAATCCTTGGTGTCAGTaGACATTTAGGCAAACTGGAGCTCATGTAAGAAAC | + |
Preference number: 3 (lower is better) Translates to: VSRQVSSNPWCQ*TFRQTGAHVRN Trigger: GTTTCTTACATGAGCTCCAGTTTGCCTAAATGTTCACTGACACCAAGGATTAGATGATACCTGCCGTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR GCA 72 bp | CTGATGTTTGGGACCAGACTGGCACACAACATAAATTaGATCCGTGGTAATATGCACCTTCCCTTCAACTAT | + |
Preference number: 3 (lower is better) Translates to: LMFGTRLAHNIN*IRGNMHLPFNY Trigger: ATAGTTGAAGGGAAGGTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CCA 72 bp | GTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATaGTTCATGACAAGTTCACTGGCATCCATAGTATGG | + |
Preference number: 3 (lower is better) Translates to: VLSLIPYSLGMS*FMTSSLASIVW Trigger: CCATACTATGGATGCCAGTGAACTTGTCATGAACCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CAA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTATCTTCGACATCATTCTaGGGTTTATCTTCCCTTTTC | + |
Preference number: 3 (lower is better) Translates to: DVARGSWDKVEETYQEDVSSTSF*GLSSLF Trigger: GAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGA...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR-3UTR CAA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAAGGCGTCTGCTGTCTTaGATGGTTGGTTGGTTTGAA | + |
Preference number: 3 (lower is better) Translates to: HKVAIVLEASPHQKGLQQRRLLS*MVGWFE Trigger: TTCAAACCAACCAACCATCAAAGACAGCAGACGCCT...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 72 bp | TGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTaGAACGGTGGGTACATACATTGTCTATATTCCATT | + |
Preference number: 3 (lower is better) Translates to: WLLKLRFFSATQ*NGGYIHCLYSI Trigger: AATGGAATATAGACAATGTATGTACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 72 bp | CGTCTGCTGTCTTTGATGGTTGGTTGGTTTGAATTCTaGCACTTAGCCTTTATTGCCTCTGAAATGGTATTG | + |
Preference number: 3 (lower is better) Translates to: RLLSLMVGWFEF*HLAFIASEMVL Trigger: CAATACCATTTCAGAGGCAATAAAGGCTAAGTGCCAGAATTCAAACCAACCAACCATCAAAGACAGCAGACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CAA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGTCTTCGACATCATTCTaGGGTTTATCTTCCCTTTTC | + |
Preference number: 3 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWSSTSF*GLSSLF Trigger: GAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGA...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 72 bp | AATTGCATGGCTAAAACATACACCTTGGTATCTTCCTaGCAGCTGGCATTAACTAAACGGTCTTGCTGGAAA | + |
Preference number: 3 (lower is better) Translates to: NCMAKTYTLVSS*QLALTKRSCWK Trigger: TTTCCAGCAAGACCGTTTAGTTAATGCCAGCTGTCAGGAAGATACCAAGGTGTATGTTTTAGCCATGCAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR GCA 72 bp | TCGAGCAAGGTACAAATGGTATTTACCCTAAACCTGTaGGTTTCCTTTAGATCCACACTTGAAGCTGTTGTT | + |
Preference number: 3 (lower is better) Translates to: SSKVQMVFTLNL*VSFRSTLEAVV Trigger: AACAACAGCTTCAAGTGTGGATCTAAAGGAAACGCACAGGTTTAGGGTAAATACCATTTGTACCTTGCTCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CAA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAATACAATCAGAGGTATaGACTATGTACGCAGAGTGG | + |
Preference number: 3 (lower is better) Translates to: HKVAIVLEASPHQKGLQQIQSEV*TMYAEW Trigger: CCACTCTGCGTACATAGTCAATACCTCTGATTGTAT...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 72 bp | AGAGGTAAAAGAAATGTTCCATACAATCAGAGGTATTaGCTATGTACGCAGAGTGGGAGGAGATGTGAGAAA | + |
Preference number: 3 (lower is better) Translates to: RGKRNVPYNQRY*LCTQSGRRCEK Trigger: TTTCTCACATCTCCTCCCACTCTGCGTACATAGTCAATACCTCTGATTGTATGGAACATTTCTTTTACCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR TCA 72 bp | GTTTGCAACAACACAGAGCGAGTTAATAACAACATCTaGGAGATGATCAGGTGGAAGCCTTATATACAGCAT | + |
Preference number: 3 (lower is better) Translates to: VCNNTERVNNNI*EMIRWKPYIQH Trigger: ATGCTGTATATAAGGCTTCCACCTGATCATCTCTCAGATGTTGTTATTAACTCGCTCTGTGTTGTTGCAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CCA 72 bp | GAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTaGGTACATACATTGTCTATATTCCATTTGTGTATA | + |
Preference number: 3 (lower is better) Translates to: EAQILLCDSVKR*VHTLSIFHLCI Trigger: TATACACAAATGGAATATAGACAATGTATGTACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR-3UTR CAA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATATTCGGGAGGGGACATTaGATTTCTTCATTAGATTAC | + |
Preference number: 3 (lower is better) Translates to: TQMDICWSTQYGTHHKNIFGRGH*ISSLDY Trigger: GTAATCTAATGAAGAAATCAAATGTCCCCTCCCGAA...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
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CDS-3UTR TCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGCAGGGCTGTGGTGGTTaGCGCTGTCCGTCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLQGCGG*RCPSGR Trigger: CCTCCCTGACGGACAGCGTCAACCACCACAGCCCTG...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCAGGGCTGTGGTGGTTaGCGCTGTCCGTCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIQGCGG*RCPSGR Trigger: CCTCCCTGACGGACAGCGTCAACCACCACAGCCCTG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGCGTCATCAGCATCTTaGCTGCACGGCGAGGGTCTT | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHASSAS*LHGEGL Trigger: AAGACCCTCGCCGTGCAGGCAAGATGCTGATGACGC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATTGGAGGAGGCTCATCTaGTCTGCCAGGGACAGTGTG | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHWRRLI*SARDSV Trigger: CACACTGTCCCTGGCAGACCAGATGAGCCTCCTCCA...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGGCTGGACTGCCTTGGTaGAGGTCTGCCTCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLAGLPW*RSASAA Trigger: CGCTGCTGAGGCAGACCTCCACCAAGGCAGTCCAGC...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATAGTGCTGGACTGCCTTaGTGGAGGTCTGCCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHSAGLP*WRSASA Trigger: TGCTGAGGCAGACCTCCACCAAGGCAGTCCAGCACT...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGTAGAAGTGCTGGACTaGCTTGGTGGAGGTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHVEVLD*LGGGLP Trigger: AGGCAGACCTCCACCAAGGCAGTCCAGCACTTCTAC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGACCCACCAGGGCTGTaGTGGTTGACGCTGTCCGTC | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIDPPGL*WLTLSV Trigger: GACGGACAGCGTCAACCACCACAGCCCTGGTGGGTC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGAGTCCAGTCCGTTCTaGTGGCCATTCATGGTTGAA | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHESSPF*WPFMVE Trigger: TTCAACCATGAATGGCCATCAGAACGGACTGGACTC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAGCGTCATCAGCATCTTaGCTGCACGGCGAGGGTCTT | + |
Preference number: 4 (lower is better) Translates to: ALASEAQILLCDSVKRWVASSAS*LHGEGL Trigger: AAGACCCTCGCCGTGCAGGCAAGATGCTGATGACGC...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGGTAGAAGTGCTGGACTaGCTTGGTGGAGGTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLVEVLD*LGGGLP Trigger: AGGCAGACCTCCACCAAGGCAGTCCAGCACTTCTAC...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTAGAGGGGTAGAGAGGTaGCGAGTCCAGTCCGTTCTG | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIRGVER*RVQSVL Trigger: CAGAACGGACTGGACTCGCCACCTCTCTACCCCTCT...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAGAGGCTCATCTGGTCTaGCAGGGACAGTGTGGAGAA | + |
Preference number: 4 (lower is better) Translates to: ALASEAQILLCDSVKRWVEAHLV*QGQCGE Trigger: TTCTCCACACTGTCCCTGGCAGACCAGATGAGCCTC...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCATCAGCATCTTGCCTaGACGGCGAGGGTCTTCCAT | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIHQHLA*TARVFH Trigger: ATGGAAGACCCTCGCCGTGCAGGCAAGATGCTGATG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTACATCAGCATCTTGCCTaGACGGCGAGGGTCTTCCAT | + |
Preference number: 4 (lower is better) Translates to: ALASEAQILLCDSVKRWVHQHLA*TARVFH Trigger: ATGGAAGACCCTCGCCGTGCAGGCAAGATGCTGATG...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAGTAGAAGTGCTGGACTaGCTTGGTGGAGGTCTGCCT | + |
Preference number: 4 (lower is better) Translates to: ALASEAQILLCDSVKRWVVEVLD*LGGGLP Trigger: AGGCAGACCTCCACCAAGGCAGTCCAGCACTTCTAC...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAGTCCGTCAGGGAGGCTaGGCTGGAGGGTTCCGTCTT | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVVRQGG*AGGFRL Trigger: AAGACGGAACCCTCCAGCCCAGCCTCCCTGACGGAC...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTACCACCAGGGCTGTGGTaGTTGACGCTGTCCGTCAGG | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVPPGLW*LTLSVR Trigger: CCTGACGGACAGCGTCAACCACCACAGCCCTGGTGG...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAGACCCACCAGGGCTGTaGTGGTTGACGCTGTCCGTC | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVDPPGL*WLTLSV Trigger: GACGGACAGCGTCAACCACCACAGCCCTGGTGGGTC...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATCTGAGGGTTCAGGTATaGGCTGTTCTCAGCATCTAT | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHLRVQV*AVLSIY Trigger: ATAGATGCTGAGAACAGCCCATACCTGAACCCTCAG...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATTGTTATATGGCTTTTTaGCTGGCTGCACCAGCTGAG | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHCYMAF*LAAPAE Trigger: CTCAGCTGGTGCAGCCAGCCAAAAAGCCATATAACA...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGCAGAATCTCCATCCATaGACTCTGGAGGAGGCTCAT | + |
Preference number: 4 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLQNLHP*TLEEAH Trigger: ATGAGCCTCCTCCAGAGTGCATGGATGGAGATTCTG...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGAGAGGGGTAGAGAGGTaGCGAGTCCAGTCCGTTCTG | + |
Preference number: 4 (lower is better) Translates to: LLLRQSLYTGSILFLTTRRGVER*RVQSVL Trigger: CAGAACGGACTGGACTCGCCACCTCTCTACCCCTCT...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGGGGATCCTCTACGATaGTGCTGGAGCAGTCATCAT | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIGDPLR*CWSSHH Trigger: ATGATGACTGCTCCAGCACCATCGTAGAGGATCCCC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTGGGGATCCTCTACGATaGTGCTGGAGCAGTCATCAT | + |
Preference number: 4 (lower is better) Translates to: AGRCTGANSTDRDPMCSAGDPLR*CWSSHH Trigger: ATGATGACTGCTCCAGCACCATCGTAGAGGATCCCC...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGGCTGGACTGCCTTGGTaGAGGTCTGCCTCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWAGLPW*RSASAA Trigger: CGCTGCTGAGGCAGACCTCCACCAAGGCAGTCCAGC...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTGCGTCTGCGCTTTGTaGTCTCACATTCATTCGTGG | + |
Preference number: 4 (lower is better) Translates to: SHLITCGLWLLKLRFFSACVCAL*SHIHSW Trigger: CCACGAATGAATGTGAGATCACAAAGCGCAGACGCA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR TCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTATGCGTCTGCGCTTTGTaGTCTCACATTCATTCGTGG | + |
Preference number: 4 (lower is better) Translates to: ALASEAQILLCDSVKRWVCVCAL*SHIHSW Trigger: CCACGAATGAATGTGAGATCACAAAGCGCAGACGCA...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATCCTTCTCTAGCTTCATaGTCTTGTACTTCTTCACCA | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHPSLAS*SCTSSP Trigger: TGGTGAAGAAGTACAAGAGCATGAAGCTAGAGAAGG...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGTCTTGGGCATGGAGTTaGGCATATATTCACACTTGG | + |
Preference number: 4 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLSWAWS*AYIHTW Trigger: CCAAGTGTGAATATATGCTCAACTCCATGCCCAAGA...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGCTTTGCCTTCGAGTTTaGTGTTGTAGAAGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLLCLRV*CCRSAG Trigger: TCCAGCACTTCTACAACATCAAACTCGAAGGCAAAG...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATTACTTCTTCACCAGCTaGAGGATAGCATTATTTAGG | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHYFFTS*RIALFR Trigger: CCTAAATAATGCTATCCTGCAGCTGGTGAAGAAGTA...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATATTAGCAAGAGCTATTaGTTTGAGGGTGACGAATTC | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHISKSY*FEGDEF Trigger: GAATTCGTCACCCTCAAAGCAATAGCTCTTGCTAAT...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAACCACCAGGGCTGTGGTaGTTGACGCTGTCCGTCAGG | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQPPGLW*LTLSVR Trigger: CCTGACGGACAGCGTCAACCACCACAGCCCTGGTGG...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCCTCTACGATGGTGCTaGAGCAGTCATCATACAGTT | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIPLRWC*SSHHTV Trigger: AACTGTATGATGACTGCTCCAGCACCATCGTAGAGG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTGAGGGTTCAGGTATaGGCTGTTCTCAGCATCTAT | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQILRVQV*AVLSIY Trigger: ATAGATGCTGAGAACAGCCCATACCTGAACCCTCAG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGCTGAGGGTTCAGGTATaGGCTGTTCTCAGCATCTAT | + |
Preference number: 4 (lower is better) Translates to: SHLITCGLWLLKLRFFSALRVQV*AVLSIY Trigger: ATAGATGCTGAGAACAGCCCATACCTGAACCCTCAG...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGCAGTGTGGAGAAGCCTaGAATATGTTTTGCCCATCC | + |
Preference number: 4 (lower is better) Translates to: SHLITCGLWLLKLRFFSAQCGEA*NMFCPS Trigger: GGATGGGCAAAACATATTCCAGGCTTCTCCACACTG...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCAGTGTGGAGAAGCCTaGAATATGTTTTGCCCATCC | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIQCGEA*NMFCPS Trigger: GGATGGGCAAAACATATTCCAGGCTTCTCCACACTG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAGCTGGACTGCCTTGGTaGAGGTCTGCCTCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQAGLPW*RSASAA Trigger: CGCTGCTGAGGCAGACCTCCACCAAGGCAGTCCAGC...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGAGTGCTGGACTGCCTTaGTGGAGGTCTGCCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWSAGLP*WRSASA Trigger: TGCTGAGGCAGACCTCCACCAAGGCAGTCCAGCACT...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATACAGGGCTGTGGTGGTTaGCGCTGTCCGTCAGGGAGG | + |
Preference number: 4 (lower is better) Translates to: TQMDICWSTQYGTHHKNIQGCGG*RCPSGR Trigger: CCTCCCTGACGGACAGCGTCAACCACCACAGCCCTG...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
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CDS-3UTR TCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTTCTTGGGCATGGAGTTaGGCATATATTCACACTTGG | + |
Preference number: 4 (lower is better) Translates to: AGRCTGANSTDRDPMCSASWAWS*AYIHTW Trigger: CCAAGTGTGAATATATGCTCAACTCCATGCCCAAGA...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTCTTTGCCTTCGAGTTTaGTGTTGTAGAAGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: AGRCTGANSTDRDPMCSALCLRV*CCRSAG Trigger: TCCAGCACTTCTACAACATCAAACTCGAAGGCAAAG...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATTCAGCCACCAACAAATaGGAGACAATCTTGTTATAT | + |
Preference number: 4 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHSATNK*ETILLY Trigger: ATATAACAAGATTGTCTCGCATTTGTTGGTGGCTGA...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGGAGGCTCATCTGGTCTaGCAGGGACAGTGTGGAGAA | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWEAHLV*QGQCGE Trigger: TTCTCCACACTGTCCCTGGCAGACCAGATGAGCCTC...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTTCTGATGGCCATTCATaGTTGAACTGTAACTCCCAC | + |
Preference number: 4 (lower is better) Translates to: AGRCTGANSTDRDPMCSASDGHS*LNCNSH Trigger: GTGGGAGTTACAGTTCAACCATGAATGGCCATCAGA...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTaGTTCCTAACCACGAGGGCAGCTAGAAACCGTATG | + |
Preference number: 4 (lower is better) Translates to: LLLRQSLYTGSI*FLTTRAARNRM Trigger: CATACGGTTTCTAGCTGCCCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | TCCTTCCTTAAATGTGCCTCTGTCTCACCTGATCACTaGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTC | + |
Preference number: 4 (lower is better) Translates to: SFLKCASVSPDH*WALASEAQILL Trigger: GAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACATTTAAGGAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGCCTGGAATATGTTTTaGCCATCCAATGATAACCAC | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIAWNMF*PSNDNH Trigger: GTGGTTATCATTGGATGGGCAAAACATATTCCAGGC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTGCCTGGAATATGTTTTaGCCATCCAATGATAACCAC | + |
Preference number: 4 (lower is better) Translates to: AGRCTGANSTDRDPMCSAAWNMF*PSNDNH Trigger: GTGGTTATCATTGGATGGGCAAAACATATTCCAGGC...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTACAGAATCTCCATCCATaGACTCTGGAGGAGGCTCAT | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVQNLHP*TLEEAH Trigger: ATGAGCCTCCTCCAGAGTGCATGGATGGAGATTCTG...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGACATCAGCATCTTGCCTaGACGGCGAGGGTCTTCCAT | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGHQHLA*TARVFH Trigger: ATGGAAGACCCTCGCCGTGCAGGCAAGATGCTGATG...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGTCCGTCAGGGAGGCTaGGCTGGAGGGTTCCGTCTT | + |
Preference number: 4 (lower is better) Translates to: TQMDICWSTQYGTHHKNIVRQGG*AGGFRL Trigger: AAGACGGAACCCTCCAGCCCAGCCTCCCTGACGGAC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
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CDS-3UTR CCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGTGTTATATGGCTTTTTaGCTGGCTGCACCAGCTGAG | + |
Preference number: 4 (lower is better) Translates to: LLLRQSLYTGSILFLTTRCYMAF*LAAPAE Trigger: CTCAGCTGGTGCAGCCAGCCAAAAAGCCATATAACA...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAATGGAGGAGGCTCATCTaGTCTGCCAGGGACAGTGTG | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQWRRLI*SARDSV Trigger: CACACTGTCCCTGGCAGACCAGATGAGCCTCCTCCA...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAAAGTGCTGGACTGCCTTaGTGGAGGTCTGCCTCAGCA | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQSAGLP*WRSASA Trigger: TGCTGAGGCAGACCTCCACCAAGGCAGTCCAGCACT...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGGAGTCCAGTCCGTTCTaGTGGCCATTCATGGTTGAA | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWESSPF*WPFMVE Trigger: TTCAACCATGAATGGCCATCAGAACGGACTGGACTC...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGTGCGTCTGCGCTTTGTaGTCTCACATTCATTCGTGG | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWCVCAL*SHIHSW Trigger: CCACGAATGAATGTGAGATCACAAAGCGCAGACGCA...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTCTTTGTTTGACATTCTaGAGAGAAGCTCTTCTTCGT | + |
Preference number: 4 (lower is better) Translates to: AGRCTGANSTDRDPMCSALCLTF*REALLR Trigger: ACGAAGAAGAGCTTCTCTGCAGAATGTCAAACAAAG...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027906.13 |
||
CDS-3UTR GCA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTAATTAGCAAGAGCTATTaGTTTGAGGGTGACGAATTC | + |
Preference number: 4 (lower is better) Translates to: ALASEAQILLCDSVKRWVISKSY*FEGDEF Trigger: GAATTCGTCACCCTCAAAGCAATAGCTCTTGCTAAT...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGGTCCGTCAGGGAGGCTaGGCTGGAGGGTTCCGTCTT | + |
Preference number: 4 (lower is better) Translates to: TKELRNQMAVTDLDEKARVRQGG*AGGFRL Trigger: AAGACGGAACCCTCCAGCCCAGCCTCCCTGACGGAC...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTATATTCACACTTGGTCTaGGGATCCTCTACGATGGTG | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVYSHLV*GSSTMV Trigger: CACCATCGTAGAGGATCCCCAGACCAAGTGTGAATA...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | AATGGTATTGGCTCACAGCTCCTTCTGAGACAGAGTTaGTATACAGGCAGCATCTTGTTCCTAACCACGAGG | + |
Preference number: 4 (lower is better) Translates to: NGIGSQLLLRQS*YTGSILFLTTR Trigger: CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAGCTGTGAGCCAATACCATT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CAA 72 bp | CACAGAATACAGAGAGCAGCTACTAACACTGGTCCATaGGTAAAGCGTTCTACGGAGGTTACTGGTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: HRIQRAATNTGP*VKRSTEVTGFW Trigger: CCAGAAACCAGTAACCTCCGTAGAACGCTTTACCAATGGACCAGTGTTAGTAGCTGCTCTCTGTATTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR TCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGAGAGTCCAGTCCGTTCTaGTGGCCATTCATGGTTGAA | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGESSPF*WPFMVE Trigger: TTCAACCATGAATGGCCATCAGAACGGACTGGACTC...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGGATCCTCTACGATGGTaGTGGAGCAGTCATCATACA | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWDPLRW*WSSHHT Trigger: TGTATGATGACTGCTCCAGCACCATCGTAGAGGATC...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACGATCCTCTACGATGGTaGTGGAGCAGTCATCATACA | + |
Preference number: 4 (lower is better) Translates to: MFGTRLAHNINCIRGNMHDPLRW*WSSHHT Trigger: TGTATGATGACTGCTCCAGCACCATCGTAGAGGATC...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGTCTCAGCATCTATTCTaGGCTTGTACTTCTGCCGAC | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWSQHLF*ACTSAD Trigger: GTCGGCAGAAGTACAAGCGCAGAATAGATGCTGAGA...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGACAGAATCTCCATCCATaGACTCTGGAGGAGGCTCAT | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGQNLHP*TLEEAH Trigger: ATGAGCCTCCTCCAGAGTGCATGGATGGAGATTCTG...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGCGTCATCAGCATCTTaGCTGCACGGCGAGGGTCTT | + |
Preference number: 4 (lower is better) Translates to: TQMDICWSTQYGTHHKNIASSAS*LHGEGL Trigger: AAGACCCTCGCCGTGCAGGCAAGATGCTGATGACGC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
CDS-3UTR CCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACTGTTATATGGCTTTTTaGCTGGCTGCACCAGCTGAG | + |
Preference number: 4 (lower is better) Translates to: MFGTRLAHNINCIRGNMHCYMAF*LAAPAE Trigger: CTCAGCTGGTGCAGCCAGCCAAAAAGCCATATAACA...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATATGGAGGAGGCTCATCTaGTCTGCCAGGGACAGTGTG | + |
Preference number: 4 (lower is better) Translates to: TQMDICWSTQYGTHHKNIWRRLI*SARDSV Trigger: CACACTGTCCCTGGCAGACCAGATGAGCCTCCTCCA...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
CDS-3UTR TCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGGTGTCGATCTTTGTTTaGCATTCTGCAGAGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWVSIFV*HSAEKL Trigger: GAGCTTCTCTGCAGAATGTCAAACAAAGATCGACAC...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027906.13 |
||
CDS-3UTR TCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACCTTTGCCTTCGAGTTTaGTGTTGTAGAAGTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: MFGTRLAHNINCIRGNMHLCLRV*CCRSAG Trigger: TCCAGCACTTCTACAACATCAAACTCGAAGGCAAAG...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGAGATCCTCTACGATGGTaGTGGAGCAGTCATCATACA | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGDPLRW*WSSHHT Trigger: TGTATGATGACTGCTCCAGCACCATCGTAGAGGATC...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCATTATATAATCGTCTaGATAGACAAGTTCATCCTC | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQIHYIIV*IDKFIL Trigger: GAGGATGAACTTGTCTATGCAGACGATTATATAATG...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTACCTTCTCTAGCTTCATaGTCTTGTACTTCTTCACCA | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVPSLAS*SCTSSP Trigger: TGGTGAAGAAGTACAAGAGCATGAAGCTAGAGAAGG...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGTCCACATCTTCTATATaGATGGAATCTGAATTAGCA | + |
Preference number: 4 (lower is better) Translates to: SHLITCGLWLLKLRFFSASTSSI*MESELA Trigger: TGCTAATTCAGATTCCATGCATATAGAAGATGTGGA...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTTCCACATCTTCTATATaGATGGAATCTGAATTAGCA | + |
Preference number: 4 (lower is better) Translates to: CASVSPDHLWALASEAQISTSSI*MESELA Trigger: TGCTAATTCAGATTCCATGCATATAGAAGATGTGGA...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACTCTGATGGCCATTCATaGTTGAACTGTAACTCCCAC | + |
Preference number: 4 (lower is better) Translates to: MFGTRLAHNINCIRGNMHSDGHS*LNCNSH Trigger: GTGGGAGTTACAGTTCAACCATGAATGGCCATCAGA...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGACCTCTACGATGGTGCTaGAGCAGTCATCATACAGTT | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGPLRWC*SSHHTV Trigger: AACTGTATGATGACTGCTCCAGCACCATCGTAGAGG...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | TCCTTCAGGGTTCATTTGTCCTTCATTAGTGTTCAATaGTTCAAAGCCAGCACGAGGTTGCGGTATCCTTAC | + |
Preference number: 4 (lower is better) Translates to: SFRVHLSFISVQ*FKASTRLRYPY Trigger: GTAAGGATACCGCAACCTCGTGCTGGCTTTGAACAATTGAACACTAATGAAGGACAAATGAACCCTGAAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | GGTTATTCGGCGACTGTAGGTTTCGGGAGGGGACATTaGATTTCTTCATTAGATTACACCTGGTTACAGTCT | + |
Preference number: 4 (lower is better) Translates to: GYSATVGFGRGH*ISSLDYTWLQS Trigger: AGACTGTAACCAGGTGTAATCTAATGAAGAAATCAAATGTCCCCTCCCGAAACCTACAGTCGCCGAATAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGGAGGCTCATCTGGTCTaGCAGGGACAGTGTGGAGAA | + |
Preference number: 4 (lower is better) Translates to: TKELRNQMAVTDLDEKAREAHLV*QGQCGE Trigger: TTCTCCACACTGTCCCTGGCAGACCAGATGAGCCTC...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | TTTGCGTTGCAATGTACTTTAGGTACGGTTCTCTCTTaGATTCCTTACTCACTGGGGATGTCATGGTTCATG | + |
Preference number: 4 (lower is better) Translates to: FALQCTLGTVLS*IPYSLGMSWFM Trigger: CATGAACCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACATTGCAACGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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3UTR CAA 72 bp | TTCATTAGTGTTCAATTGTTCAAAGCCAGCACGAGGTaGCGGTATCCTTACCCCTCTCTAGTATTGCATGAA | + |
Preference number: 4 (lower is better) Translates to: FISVQLFKASTR*RYPYPSLVLHE Trigger: TTCATGCAATACTAGAGAGGGGTAAGGATACCGCAACCTCGTGCTGGCTTTGAACAATTGAACACTAATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAATCTTGGGCATGGAGTTaGGCATATATTCACACTTGG | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQSWAWS*AYIHTW Trigger: CCAAGTGTGAATATATGCTCAACTCCATGCCCAAGA...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTATCAGCCACCAACAAATaGGAGACAATCTTGTTATAT | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVSATNK*ETILLY Trigger: ATATAACAAGATTGTCTCGCATTTGTTGGTGGCTGA...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGCATTATATAATCGTCTaGATAGACAAGTTCATCCTC | + |
Preference number: 4 (lower is better) Translates to: LLLRQSLYTGSILFLTTRHYIIV*IDKFIL Trigger: GAGGATGAACTTGTCTATGCAGACGATTATATAATG...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACTACTTCTTCACCAGCTaGAGGATAGCATTATTTAGG | + |
Preference number: 4 (lower is better) Translates to: MFGTRLAHNINCIRGNMHYFFTS*RIALFR Trigger: CCTAAATAATGCTATCCTGCAGCTGGTGAAGAAGTA...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGATGGCCATTCATGGTTaGACTGTAACTCCCACTGGC | + |
Preference number: 4 (lower is better) Translates to: TKELRNQMAVTDLDEKARMAIHG*TVTPTG Trigger: GCCAGTGGGAGTTACAGTTCAACCATGAATGGCCAT...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR TCA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGTACTCTATGTTACCTTaGATCGTCCTCTTGAAGAAT | + |
Preference number: 4 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWYSMLP*IVLLKN Trigger: ATTCTTCAAGAGGACGATTCAAGGTAACATAGAGTA...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAACCTTCTCTAGCTTCATaGTCTTGTACTTCTTCACCA | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQPSLAS*SCTSSP Trigger: TGGTGAAGAAGTACAAGAGCATGAAGCTAGAGAAGG...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTATCCACATCTTCTATATaGATGGAATCTGAATTAGCA | + |
Preference number: 4 (lower is better) Translates to: DVARGSWDKVEETYQEDVSTSSI*MESELA Trigger: TGCTAATTCAGATTCCATGCATATAGAAGATGTGGA...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGATCAGCCACCAACAAATaGGAGACAATCTTGTTATAT | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGSATNK*ETILLY Trigger: ATATAACAAGATTGTCTCGCATTTGTTGGTGGCTGA...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGTATTCACACTTGGTCTaGGGATCCTCTACGATGGTG | + |
Preference number: 4 (lower is better) Translates to: TKELRNQMAVTDLDEKARYSHLV*GSSTMV Trigger: CACCATCGTAGAGGATCCCCAGACCAAGTGTGAATA...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
3UTR CAA 72 bp | GGTATTTTGCTTAACGCACACAAAGTAGCAATAGTTTaGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAA | + |
Preference number: 4 (lower is better) Translates to: GILLNAHKVAIV*EASPHQKGLQQ Trigger: TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTGTGCGTTAAGCAAAATACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR TCA 90 bp | CACAAAGTAGCAATAGTTTTGGAAGCAAGTCCGCACCAAAAAGGTTTGCAACAATACTCTATGTTACCTTaGATCGTCCTCTTGAAGAAT | + |
Preference number: 4 (lower is better) Translates to: HKVAIVLEASPHQKGLQQYSMLP*IVLLKN Trigger: ATTCTTCAAGAGGACGATTCAAGGTAACATAGAGTA...TTGTTGCAAACCTTTTTGGTGCGGACTTGCTTCCAAAACTATTGCTACTTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR GCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGCCTGGAATATGTTTTaGCCATCCAATGATAACCAC | + |
Preference number: 4 (lower is better) Translates to: TQMDICWSTQYGTHHKNIAWNMF*PSNDNH Trigger: GTGGTTATCATTGGATGGGCAAAACATATTCCAGGC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
CDS-3UTR GCA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGACATTATATAATCGTCTaGATAGACAAGTTCATCCTC | + |
Preference number: 4 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGHYIIV*IDKFIL Trigger: GAGGATGAACTTGTCTATGCAGACGATTATATAATG...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR GCA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAATTAGCAAGAGCTATTaGTTTGAGGGTGACGAATTC | + |
Preference number: 4 (lower is better) Translates to: TQMDICWSTQYGTHHKNIISKSY*FEGDEF Trigger: GAATTCGTCACCCTCAAAGCAATAGCTCTTGCTAAT...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
||
3UTR CAA 72 bp | ATCCGTGGTAATATGCACCTTCCCTTCAACTATTGCTaGAGTAAGTTAAATCCCCATATTAATAAATGGCTG | + |
Preference number: 4 (lower is better) Translates to: IRGNMHLPFNYC*SKLNPHINKWL Trigger: CAGCCATTTATTAATATGGGGATTTAACTTACTCAAGCAATAGTTGAAGGGAAGGTGCATATTACCACGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR TCA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGTACTCTATGTTACCTTaGATCGTCCTCTTGAAGAAT | + |
Preference number: 4 (lower is better) Translates to: TKELRNQMAVTDLDEKARYSMLP*IVLLKN Trigger: ATTCTTCAAGAGGACGATTCAAGGTAACATAGAGTA...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS CCA 90 bp | AGGGGTAGAGAGGTGGCGAGTCCAGTCCGTTCTGATGGCCATTCATaGTTGAACTGTAACTCCCACTGGCGTCGGAAGACCCACCAGGGC | + |
Preference number: 5 (lower is better) Translates to: RGREVASPVRSDGHS*LNCNSHWRRKTHQG Trigger: GCCCTGGTGGGTCTTCCGACGCCAGTGGGAGTTACAGTTCAACCATGAATGGCCATCAGAACGGACTGGACTCGCCACCTCTCTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS TCA 90 bp | GTAGAGAGGTGGCGAGTCCAGTCCGTTCTGATGGCCATTCATGGTTaGACTGTAACTCCCACTGGCGTCGGAAGACCCACCAGGGCTGTG | + |
Preference number: 5 (lower is better) Translates to: VERWRVQSVLMAIHG*TVTPTGVGRPTRAV Trigger: CACAGCCCTGGTGGGTCTTCCGACGCCAGTGGGAGTTACAGTTCAACCATGAATGGCCATCAGAACGGACTGGACTCGCCACCTCTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGCCAGGGCTGTGGTGGTaGACGCTGTCCGTCAGGGAG | + |
Preference number: 5 (lower is better) Translates to: LLLRQSLYTGSILFLTTRPGLWW*TLSVRE Trigger: CTCCCTGACGGACAGCGTCAACCACCACAGCCCTGG...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGAGTGTGGTGAGGGCTTaGATGTCACTGTCGGGGACA | + |
Preference number: 5 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLSVVRA*MSLSGT Trigger: TGTCCCCGACAGTGACATCAAAGCCCTCACCACACT...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATAGCATATATTCACACTaGGTCTGGGGATCCTCTACG | + |
Preference number: 5 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHSIYSH*VWGSST Trigger: CGTAGAGGATCCCCAGACCAAGTGTGAATATATGCT...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGAGTGTGGTGAGGGCTTaGATGTCACTGTCGGGGACA | + |
Preference number: 5 (lower is better) Translates to: SHLITCGLWLLKLRFFSASVVRA*MSLSGT Trigger: TGTCCCCGACAGTGACATCAAAGCCCTCACCACACT...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATTCTAGCTTCATGCTCTaGTACTTCTTCACCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHSSFML*YFFTSC Trigger: GCAGCTGGTGAAGAAGTACAAGAGCATGAAGCTAGA...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS TCA 90 bp | AGGCGATGTCGCCACACACTAAGCACAGTCTCTTGGGCATGGAGTTaGGCATATATTCACACTTGGTCTGGGGATCCTCTACGATGGTGC | + |
Preference number: 5 (lower is better) Translates to: RRCRHTLSTVSWAWS*AYIHTWSGDPLRWC Trigger: GCACCATCGTAGAGGATCCCCAGACCAAGTGTGAATATATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGTGTGTGGCGACATCGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGACCAGGGCTGTGGTGGTaGACGCTGTCCGTCAGGGAG | + |
Preference number: 5 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGPGLWW*TLSVRE Trigger: CTCCCTGACGGACAGCGTCAACCACCACAGCCCTGG...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | TGTGCCTCTGTCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTGCATCTATTCTGCGCTaGTACTTCTGCCGACCTCCA | + |
Preference number: 5 (lower is better) Translates to: CASVSPDHLWALASEAQIASILR*YFCRPP Trigger: TGGAGGTCGGCAGAAGTACAAGCGCAGAATAGATGC...AATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGACAGAGGCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGCTGGAGGGTTCCGTCTaGATGAAGGACGAACAGCTG | + |
Preference number: 5 (lower is better) Translates to: LLLRQSLYTGSILFLTTRLEGSV*MKDEQL Trigger: CAGCTGTTCGTCCTTCATCAAGACGGAACCCTCCAG...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | GAAAGCAAGGAGAAGCAGCCAATGCCGCCACTTAGGTTGTCTGATCGAAGGCTGGCAAGAGCTATTGCTTaGAGGGTGACGAATTCTTCC | + |
Preference number: 5 (lower is better) Translates to: ESKEKQPMPPLRLSDRRLARAIA*RVTNSS Trigger: GGAAGAATTCGTCACCCTCAAAGCAATAGCTCTTGC...CAGCCTTCGATCAGACAACCTAAGTGGCGGCATTGGCTGCTTCTCCTTGCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGAGCGTCATCAGCATCTaGCCTGCACGGCGAGGGTCT | + |
Preference number: 5 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWSVISI*PARRGS Trigger: AGACCCTCGCCGTGCAGGCAAGATGCTGATGACGCT...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS TCA 90 bp | TGCGAGACAATCTTGTTATATGGCTTTTTGGCTGGCTGCACCAGCTaGGGGTTCAGGTATGGGCTGTTCTCAGCATCTATTCTGCGCTTG | + |
Preference number: 5 (lower is better) Translates to: CETILLYGFLAGCTS*GFRYGLFSASILRL Trigger: CAAGCGCAGAATAGATGCTGAGAACAGCCCATACCTGAACCCTCAGCTGGTGCAGCCAGCCAAAAAGCCATATAACAAGATTGTCTCGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
||
CDS-3UTR CAA 90 bp | TCTCACCTGATCACTTGTGGGCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTAAGCACAGTCTCTaGGGCATGGAGTTGAGCATA | + |
Preference number: 5 (lower is better) Translates to: SHLITCGLWLLKLRFFSATKHSL*GMELSI Trigger: TATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGT...CGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGCCCACAAGTGATCAGGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ATCCCATGTGCAGTGCTCGTGGATGGGACCACTCGGTGTCACGGCAGGTATCATGTACTCTATGTTACCTaGAATCGTCCTCTTGAAGAA | + |
Preference number: 5 (lower is better) Translates to: IPCAVLVDGTTRCHGRYHVLYVT*NRPLEE Trigger: TTCTTCAAGAGGACGATTCAAGGTAACATAGAGTAC...ATGATACCTGCCGTGACACCGAGTGGTCCCATCCACGAGCACTGCACATGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAAGTGTGGTGAGGGCTTaGATGTCACTGTCGGGGACA | + |
Preference number: 5 (lower is better) Translates to: DVARGSWDKVEETYQEDVSVVRA*MSLSGT Trigger: TGTCCCCGACAGTGACATCAAAGCCCTCACCACACT...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTATCTAGCTTCATGCTCTaGTACTTCTTCACCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: ALASEAQILLCDSVKRWVSSFML*YFFTSC Trigger: GCAGCTGGTGAAGAAGTACAAGAGCATGAAGCTAGA...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGAAGCGTCATCAGCATCTaGCCTGCACGGCGAGGGTCT | + |
Preference number: 5 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGSVISI*PARRGS Trigger: AGACCCTCGCCGTGCAGGCAAGATGCTGATGACGCT...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GCTCTGGCTTCTGAAGCTCAGATTCTTCTCTGCGACTCAGTGAAACGGTGGGTACTCTTGGGCATGGAGTaGAGCATATATTCACACTTG | + |
Preference number: 5 (lower is better) Translates to: ALASEAQILLCDSVKRWVLLGME*SIYSHL Trigger: CAAGTGTGAATATATGCTCAACTCCATGCCCAAGAG...TACCCACCGTTTCACTGAGTCGCAGAGAAGAATCTGAGCTTCAGAAGCCAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTCTCTTGGGCATGGAGTaGAGCATATATTCACACTTG | + |
Preference number: 5 (lower is better) Translates to: AGRCTGANSTDRDPMCSALLGME*SIYSHL Trigger: CAAGTGTGAATATATGCTCAACTCCATGCCCAAGAG...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAGCATCTATTCTGCGCTaGTACTTCTGCCGACCTCCA | + |
Preference number: 5 (lower is better) Translates to: DVARGSWDKVEETYQEDVASILR*YFCRPP Trigger: TGGAGGTCGGCAGAAGTACAAGCGCAGAATAGATGC...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACGCATCTATTCTGCGCTaGTACTTCTGCCGACCTCCA | + |
Preference number: 5 (lower is better) Translates to: MFGTRLAHNINCIRGNMHASILR*YFCRPP Trigger: TGGAGGTCGGCAGAAGTACAAGCGCAGAATAGATGC...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAAGCATATATTCACACTaGGTCTGGGGATCCTCTACG | + |
Preference number: 5 (lower is better) Translates to: DVARGSWDKVEETYQEDVSIYSH*VWGSST Trigger: CGTAGAGGATCCCCAGACCAAGTGTGAATATATGCT...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAACTAAGCACAGTCTCTaGGGCATGGAGTTGAGCATA | + |
Preference number: 5 (lower is better) Translates to: DVARGSWDKVEETYQEDVTKHSL*GMELSI Trigger: TATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGT...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GATGTGGCCAGAGGATCGTGGGATAAAGTAGAGGAAACCTATCAGGAAGATGTAGCAAGAGCTATTGCTTaGAGGGTGACGAATTCTTCC | + |
Preference number: 5 (lower is better) Translates to: DVARGSWDKVEETYQEDVARAIA*RVTNSS Trigger: GGAAGAATTCGTCACCCTCAAAGCAATAGCTCTTGC...TACATCTTCCTGATAGGTTTCCTCTACTTTATCCCACGATCCTCTGGCCACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | GCAGGGAGGTGTACTGGTGCTAATTCTACAGATAGGGATCCCATGTGCAGTGCTAAATGCGAGACAATCTaGTTATATGGCTTTTTGGCT | + |
Preference number: 5 (lower is better) Translates to: AGRCTGANSTDRDPMCSAKCETI*LYGFLA Trigger: AGCCAAAAAGCCATATAACAAGATTGTCTCGCATTT...AGCACTGCACATGGGATCCCTATCTGTAGAATTAGCACCAGTACACCTCCCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ACAAAAGAATTAAGGAATCAAATGGCTGTAACTGATCTAGATGAGAAAGCAAGGAGCGTCATCAGCATCTaGCCTGCACGGCGAGGGTCT | + |
Preference number: 5 (lower is better) Translates to: TKELRNQMAVTDLDEKARSVISI*PARRGS Trigger: AGACCCTCGCCGTGCAGGCAAGATGCTGATGACGCT...CCTTGCTTTCTCATCTAGATCAGTTACAGCCATTTGATTCCTTAATTCTTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATACTGGAGGGTTCCGTCTaGATGAAGGACGAACAGCTG | + |
Preference number: 5 (lower is better) Translates to: TQMDICWSTQYGTHHKNILEGSV*MKDEQL Trigger: CAGCTGTTCGTCCTTCATCAAGACGGAACCCTCCAG...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
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CDS-3UTR CAA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGAACTAAGCACAGTCTCTaGGGCATGGAGTTGAGCATA | + |
Preference number: 5 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGTKHSL*GMELSI Trigger: TATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGT...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGGTACTCTATGTTACCTaGAATCGTCCTCTTGAAGAA | + |
Preference number: 5 (lower is better) Translates to: LLLRQSLYTGSILFLTTRVLYVT*NRPLEE Trigger: TTCTTCAAGAGGACGATTCAAGGTAACATAGAGTAC...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGATCTAGCTTCATGCTCTaGTACTTCTTCACCAGCTGC | + |
Preference number: 5 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGSSFML*YFFTSC Trigger: GCAGCTGGTGAAGAAGTACAAGAGCATGAAGCTAGA...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | TGTACTTTAGGTACGGTTCTCTCTTTGATTCCTTACTCACTGGGGATGTCATGGTGTGTCGATCTTTGTTaGACATTCTGCAGAGAAGCT | + |
Preference number: 5 (lower is better) Translates to: CTLGTVLSLIPYSLGMSWCVDLC*TFCREA Trigger: AGCTTCTCTGCAGAATGTCAAACAAAGATCGACACA...CCATGACATCCCCAGTGAGTAAGGAATCAAAGAGAGAACCGTACCTAAAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027906.13 |
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CDS-3UTR CAA 90 bp | ATTCTTCGACATCATTCTTGGGTTTATCTTCCCTTTTCAACGTGCAGGATGGGACTCTTGGGCATGGAGTaGAGCATATATTCACACTTG | + |
Preference number: 5 (lower is better) Translates to: ILRHHSWVYLPFSTCRMGLLGME*SIYSHL Trigger: CAAGTGTGAATATATGCTCAACTCCATGCCCAAGAG...TCCCATCCTGCACGTTGAAAAGGGAAGATAAACCCAAGAATGATGTCGAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | CTCCTTCTGAGACAGAGTTTGTATACAGGCAGCATCTTGTTCCTAACCACGAGGAAATGCGAGACAATCTaGTTATATGGCTTTTTGGCT | + |
Preference number: 5 (lower is better) Translates to: LLLRQSLYTGSILFLTTRKCETI*LYGFLA Trigger: AGCCAAAAAGCCATATAACAAGATTGTCTCGCATTT...CCTCGTGGTTAGGAACAAGATGCTGCCTGTATACAAACTCTGTCTCAGAAGGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ATGTTTGGGACCAGACTGGCACACAACATAAATTGCATCCGTGGTAATATGCACGTACTCTATGTTACCTaGAATCGTCCTCTTGAAGAA | + |
Preference number: 5 (lower is better) Translates to: MFGTRLAHNINCIRGNMHVLYVT*NRPLEE Trigger: TTCTTCAAGAGGACGATTCAAGGTAACATAGAGTAC...GTGCATATTACCACGGATGCAATTTATGTTGTGTGCCAGTCTGGTCCCAAACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS-3UTR CAA 90 bp | ACACAAATGGACATTTGCTGGAGCACACAGTATGGTACACATCACAAAAATATAGCAAGAGCTATTGCTTaGAGGGTGACGAATTCTTCC | + |
Preference number: 5 (lower is better) Translates to: TQMDICWSTQYGTHHKNIARAIA*RVTNSS Trigger: GGAAGAATTCGTCACCCTCAAAGCAATAGCTCTTGC...TATATTTTTGTGATGTGTACCATACTGTGTGCTCCAGCAAATGTCCATTTGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 |
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CDS GCA 72 bp | TGGAGCAGTCATCATACAGTTTCCGGACAGGCCCGCTaGCTCCCAGGATCGGAGCAGAGGGGTAGAGAGGTG | + |
Preference number: 6 (lower is better) Translates to: WSSHHTVSGQAR*LPGSEQRGREV Trigger: CACCTCTCTACCCCTCTGCTCCGATCCTGGGAGGCAGCGGGCCTGTCCGGAAACTGTATGATGACTGCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CAA 90 bp | GGTAGAGAGGTGGCGAGTCCAGTCCGTTCTGATGGCCATTCATGGTaGAACTGTAACTCCCACTGGCGTCGGAAGACCCACCAGGGCTGT | + |
Preference number: 6 (lower is better) Translates to: GREVASPVRSDGHSW*NCNSHWRRKTHQGC Trigger: ACAGCCCTGGTGGGTCTTCCGACGCCAGTGGGAGTTACAGTTCAACCATGAATGGCCATCAGAACGGACTGGACTCGCCACCTCTCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS TCA 72 bp | TGGCGAGTCCAGTCCGTTCTGATGGCCATTCATGGTTaGACTGTAACTCCCACTGGCGTCGGAAGACCCACC | + |
Preference number: 6 (lower is better) Translates to: WRVQSVLMAIHG*TVTPTGVGRPT Trigger: GGTGGGTCTTCCGACGCCAGTGGGAGTTACAGTTCAACCATGAATGGCCATCAGAACGGACTGGACTCGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CCA 72 bp | GAGGTGGCGAGTCCAGTCCGTTCTGATGGCCATTCATaGTTGAACTGTAACTCCCACTGGCGTCGGAAGACC | + |
Preference number: 6 (lower is better) Translates to: EVASPVRSDGHS*LNCNSHWRRKT Trigger: GGTCTTCCGACGCCAGTGGGAGTTACAGTTCAACCATGAATGGCCATCAGAACGGACTGGACTCGCCACCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CAA 72 bp | CTGTCCGTCAGGGAGGCTGGGCTGGAGGGTTCCGTCTaGATGAAGGACGAACAGCTGGAATCAATGTGTCGA | + |
Preference number: 6 (lower is better) Translates to: LSVREAGLEGSV*MKDEQLESMCR Trigger: TCGACACATTGATTCCAGCTGTTCGTCCTTCATCAAGACGGAACCCTCCAGCCCAGCCTCCCTGACGGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 ENSMUST00000127489.8 |
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CDS GCA 72 bp | TTTGCCTTCGAGTTTGATGTTGTAGAAGTGCTGGACTaGCTTGGTGGAGGTCTGCCTCAGCAGCGGCAGCGT | + |
Preference number: 6 (lower is better) Translates to: FAFEFDVVEVLD*LGGGLPQQRQR Trigger: ACGCTGCCGCTGCTGAGGCAGACCTCCACCAAGGCAGTCCAGCACTTCTACAACATCAAACTCGAAGGCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CAA 90 bp | GAGGCGATGTCGCCACACACTAAGCACAGTCTCTTGGGCATGGAGTaGAGCATATATTCACACTTGGTCTGGGGATCCTCTACGATGGTG | + |
Preference number: 6 (lower is better) Translates to: EAMSPHTKHSLLGME*SIYSHLVWGSSTMV Trigger: CACCATCGTAGAGGATCCCCAGACCAAGTGTGAATATATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGTGTGTGGCGACATCGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS GCA 72 bp | TATATTCACACTTGGTCTGGGGATCCTCTACGATGGTaGTGGAGCAGTCATCATACAGTTTCCGGACAGGCC | + |
Preference number: 6 (lower is better) Translates to: YIHTWSGDPLRW*WSSHHTVSGQA Trigger: GGCCTGTCCGGAAACTGTATGATGACTGCTCCAGCACCATCGTAGAGGATCCCCAGACCAAGTGTGAATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CAA 72 bp | CCAGAGGCGATGTCGCCACACACTAAGCACAGTCTCTaGGGCATGGAGTTGAGCATATATTCACACTTGGTC | + |
Preference number: 6 (lower is better) Translates to: PEAMSPHTKHSL*GMELSIYSHLV Trigger: GACCAAGTGTGAATATATGCTCAACTCCATGCCCAAGAGACTGTGCTTAGTGTGTGGCGACATCGCCTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CCA 72 bp | CAAATGCGAGACAATCTTGTTATATGGCTTTTTGGCTaGCTGCACCAGCTGAGGGTTCAGGTATGGGCTGTT | + |
Preference number: 6 (lower is better) Translates to: QMRDNLVIWLFG*LHQLRVQVWAV Trigger: AACAGCCCATACCTGAACCCTCAGCTGGTGCAGCCAGCCAAAAAGCCATATAACAAGATTGTCTCGCATTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS TCA 72 bp | GGACGAACAGCTGGAATCAATGTGTCGATCTTTGTTTaGCATTCTGCAGAGAAGCTCTTCTTCGTAGTGCAG | + |
Preference number: 6 (lower is better) Translates to: GRTAGINVSIFV*HSAEKLFFVVQ Trigger: CTGCACTACGAAGAAGAGCTTCTCTGCAGAATGTCAAACAAAGATCGACACATTGATTCCAGCTGTTCGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027906.13 |
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CDS GCA 72 bp | TTCTCTAGCTTCATGCTCTTGTACTTCTTCACCAGCTaGAGGATAGCATTATTTAGGTCAAGAAGGCCTGCT | + |
Preference number: 6 (lower is better) Translates to: FSSFMLLYFFTS*RIALFRSRRPA Trigger: AGCAGGCCTTCTTGACCTAAATAATGCTATCCTGCAGCTGGTGAAGAAGTACAAGAGCATGAAGCTAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |
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CDS CAA 72 bp | ATATGCATGGAATCTGAATTAGCAAGAGCTATTGCTTaGAGGGTGACGAATTCTTCCTTCTCTAGCTTCATG | + |
Preference number: 6 (lower is better) Translates to: ICMESELARAIA*RVTNSSFSSFM Trigger: CATGAAGCTAGAGAAGGAAGAATTCGTCACCCTCAAAGCAATAGCTCTTGCTAATTCAGATTCCATGCATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027906.13 ENSMUST00000110938.2 ENSMUST00000110939.8 |