Pregenerated sensors for ESRRB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021255Ensembl transcript IDs: ENSMUST00000021680.12, ENSMUST00000110203.8, ENSMUST00000110204.9, ENSMUST00000116402.10, ENSMUST00000167891.2
Found 279 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTGCCAGAACGCCTaGAAGAGGGGACCCTTGCACTCCAGGAAGGGATCAGAGCAGGTA | + |
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Preference number: 1 (lower is better) Translates to: HPGGRASSSGRCQNA*KRGPLHSRKGSEQV Trigger: TACCTGCTCTGATCCCTTCCTGGAGTGCAAGGGTCCCCTCTTTCAGGCGTTCTGGCACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | GACAACCAGACTGCAGGGTCTTGCCGGGAATTGACCCAGGAGGGCTaGATCAAACATCCCTGGTGCAAATGCCAGGAGGCTGCCCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: DNQTAGSCRELTQEG*IKHPWCKCQEAALL Trigger: TAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGGGTCAATTCCCGGCAAGACCCTGCAGTCTGGTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | GGGTCTTGCCGGGAATTGACCCAGGAGGGCTGCATCAAACATCCCTaGTGCAAATGCCAGGAGGCTGCCCTCCTATGGCACAAAGCCAAG | + |
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Preference number: 1 (lower is better) Translates to: GSCRELTQEGCIKHP*CKCQEAALLWHKAK Trigger: CTTGGCTTTGTGCCATAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGGGTCAATTCCCGGCAAGACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | GCATTCATGTGCCTAGGGCTGAGGGGTTTTAGGACTGCGGTGGGTTaGTGGAGCACCCTATACGACAACCAGACTGCAGGGTCTTGCCGG | + |
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Preference number: 1 (lower is better) Translates to: AFMCLGLRGFRTAVG*WSTLYDNQTAGSCR Trigger: CCGGCAAGACCCTGCAGTCTGGTTGTCGTATAGGGTGCTCCACCAACCCACCGCAGTCCTAAAACCCCTCAGCCCTAGGCACATGAATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | TCACTAGATCAAGGAGCCGAGCCGAGGTGCCCATTTAACTGCTGCTaGTGCTGCTTCAAAGCAGTGTGTCCGCTCAGGCAGCTGTGGGTG | + |
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Preference number: 1 (lower is better) Translates to: SLDQGAEPRCPFNCC*CCFKAVCPLRQLWV Trigger: CACCCACAGCTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATCTAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | GCATCACTAGATCAAGGAGCCGAGCCGAGGTGCCCATTTAACTGCTaGTGCTGCTGCTTCAAAGCAGTGTGTCCGCTCAGGCAGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: ASLDQGAEPRCPFNC*CCCFKAVCPLRQLW Trigger: CCACAGCTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATCTAGTGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | TTCATGTGCCTAGGGCTGAGGGGTTTTAGGACTGCGGTGGGTTGGTaGAGCACCCTATACGACAACCAGACTGCAGGGTCTTGCCGGGAA | + |
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Preference number: 1 (lower is better) Translates to: FMCLGLRGFRTAVGW*STLYDNQTAGSCRE Trigger: TTCCCGGCAAGACCCTGCAGTCTGGTTGTCGTATAGGGTGCTCCACCAACCCACCGCAGTCCTAAAACCCCTCAGCCCTAGGCACATGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | AGGGAGGGGCCAAGGGGGACCTTTAGAGCTCCTTCCTTTCCGAGGTaGAATGAGACTTTCCCTCTACCGCTGGGTCTCTCTGCTATCCTA | + |
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Preference number: 1 (lower is better) Translates to: REGPRGTFRAPSFPR*NETFPLPLGLSAIL Trigger: TAGGATAGCAGAGAGACCCAGCGGTAGAGGGAAAGTCTCATTGCACCTCGGAAAGGAAGGAGCTCTAAAGGTCCCCCTTGGCCCCTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | CTAGATCAAGGAGCCGAGCCGAGGTGCCCATTTAACTGCTGCTGCTaGTGCTTCAAAGCAGTGTGTCCGCTCAGGCAGCTGTGGGTGTTT | + |
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Preference number: 1 (lower is better) Translates to: LDQGAEPRCPFNCCC*CFKAVCPLRQLWVF Trigger: AAACACCCACAGCTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATCTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | CTTGCATCACTAGATCAAGGAGCCGAGCCGAGGTGCCCATTTAACTaGTGCTGCTGCTGCTTCAAAGCAGTGTGTCCGCTCAGGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LASLDQGAEPRCPFN*CCCCFKAVCPLRQL Trigger: CAGCTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATCTAGTGATGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | CCGTATGGGGTGCTTGCATCACTAGATCAAGGAGCCGAGCCGAGGTaGCCATTTAACTGCTGCTGCTGCTGCTTCAAAGCAGTGTGTCCG | + |
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Preference number: 1 (lower is better) Translates to: PYGVLASLDQGAEPR*PFNCCCCCFKAVCP Trigger: CGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATCTAGTGATGCAAGCACCCCATACGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR TCA 90 bp | TTTGAGCACCCTGGCATCACAGATGTCTCTCATCTGGCTAGTCTTTaGACAAGTGGGCTCTACCCTCTGACTCCAGGTGCCCAGGGCACC | + |
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Preference number: 1 (lower is better) Translates to: FEHPGITDVSHLASL*TSGLYPLTPGAQGT Trigger: GGTGCCCTGGGCACCTGGAGTCAGAGGGTAGAGCCCACTTGTTCAAAGACTAGCCAGATGAGAGACATCTGTGATGCCAGGGTGCTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | ACCCAAACCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTaGGTGGGTGAAAGGTGCATTCATGTGCCTAGGGCTGAGGGGTTT | + |
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Preference number: 1 (lower is better) Translates to: TQTQGHTQHEPGTAF*VGERCIHVPRAEGF Trigger: AAACCCCTCAGCCCTAGGCACATGAATGCACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGGTTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | CCAGGAGGGCTGCATCAAACATCCCTGGTGCAAATGCCAGGAGGCTaGCCTCCTATGGCACAAAGCCAAGCCTTGCCTTTTTATGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: PGGLHQTSLVQMPGG*PPMAQSQALPFYEV Trigger: TACCTCATAAAAAGGCAAGGCTTGGCTTTGTGCCATAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | CAATCTCTCCACATAGTGCTTCTCTTTGGTGCTGTTCCATGGGCTTaGACTCTGGGCCCTCCTGTCTCCTTGTCACACGTCTGTCATCCT | + |
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Preference number: 1 (lower is better) Translates to: QSLHIVLLFGAVPWA*TLGPPVSLSHVCHP Trigger: AGGATGACAGACGTGTGACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | ATAAAGCAATCTCTCCACATAGTGCTTCTCTTTGGTGCTGTTCCATaGGCTTGGACTCTGGGCCCTCCTGTCTCCTTGTCACACGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: IKQSLHIVLLFGAVP*AWTLGPPVSLSHVC Trigger: ACAGACGTGTGACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGATTGCTTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | TCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGATaGAAAACCTGGGAGGCACGCCAGAACCATCCAGAATCTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SYFSSSVHGKSSVHG*KTWEARQNHPESSE Trigger: TTCTGAAGATTCTGGATGGTTCTGGCGTGCCTCCCAGGTTTTGCATCCGTGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR GCA 90 bp | TTATCAGAAAATAAAGCAATCTCTCCACATAGTGCTTCTCTTTGGTaGTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCTCCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: LSENKAISPHSASLW*CSMGLDSGPSCLLV Trigger: GACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGATTGCTTTATTTTCTGATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | TCATTATCAGAAAATAAAGCAATCTCTCCACATAGTGCTTCTCTTTaGTGCTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SLSENKAISPHSASL*CCSMGLDSGPSCLL Trigger: AAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGATTGCTTTATTTTCTGATAATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CCA 90 bp | GCAGACCTTTCCTTATTTATTAGATTTCAGATACATGGGACTGGATaGGAGATAATCCCAGGGCATGTAGTTTACATGAGGGCCGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: ADLSLFIRFQIHGTG*EIIPGHVVYMRAVG Trigger: TCCCACGGCCCTCATGTAAACTACATGCCCTGGGATTATCTCCCATCCAGTCCCATGTATCTGAAATCTAATAAATAAGGAAAGGTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR TCA 90 bp | AGATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTaGACTTACCCTGACATCTTTAAACAGTGTTACCCTGGACAAATT | + |
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Preference number: 1 (lower is better) Translates to: RSSCLSACLMLGLKA*TYPDIFKQCYPGQI Trigger: AATTTGTCCAGGGTAACACTGTTTAAAGATGTCAGGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
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| 3UTR TCA 90 bp | TATAATAAGAGTTGTGTACATAATGTCCTAGCCAACTTAGCAAGCTaGGCCCTCACTACTGTGTGTTACTTATGCGGTGAACATAATTAT | + |
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Preference number: 1 (lower is better) Translates to: YNKSCVHNVLANLAS*ALTTVCYLCGEHNY Trigger: ATAATTATGTTCACCGCATAAGTAACACACAGTAGTGAGGGCTCAGCTTGCTAAGTTGGCTAGGACATTATGTACACAACTCTTATTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
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| 3UTR-3UTR CCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTAGGGAGCCAGCTAGATaGAGGAGGAACAGAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: DQSPRGVTREAEPAVVAGREPAR*RRNRAS Trigger: CGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCT...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTGAAGGCTGCTTCCTCTaGTGGTCTCCAGCTCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: DQSPRGVTREAEPAVVAGEGCFL*WSPALR Trigger: CCTTAGAGCTGGAGACCACCAGAGGAAGCAGCCTTC...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTCCAGGAGTCTGCACATaGCCAGGAAGCAAGAAGACC | + |
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Preference number: 2 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRPGVCT*PGSKKT Trigger: GGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGG...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAAAAGTCGAGGCTGGTaGCTGTGGAGGTCTCCACTT | + |
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Preference number: 2 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQKSRGW*LWRSPL Trigger: AAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR TCA 90 bp | CCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTAGCAGGAGCATCCACTaGGAACTGGGTGTACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: PKDTHSMSLGLPFGWVKGSRSIH*ELGVLG Trigger: TCCCAGTACACCCAGTTCTCAGTGGATGCTCCTGCT...ACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACAGAAATGGATCCCTTaGAGGAAGGCTGCTTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GGSQLDGGGTEPRDRPQRQKWIP*RKAASS Trigger: AGAGGAAGCAGCCTTCCTGCAAGGGATCCATTTCTG...TCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTCAACCCAAACCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGCCGGGCACTAAGCACTaGCCATCCAGATACCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: LSTQTQGHTQHEPGTAFWPGTKH*PSRYLQ Trigger: CTGGAGGTATCTGGATGGGCAGTGCTTAGTGCCCGG...CCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGGTTTGGGTTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR GCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTAAAGGTGCATTCATGTaGCTAGGGCTGAGGGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: DQSPRGVTREAEPAVVAGKGAFM*LGLRGF Trigger: AAAACCCCTCAGCCCTAGGCACATGAATGCACCTTT...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTGCATCCACTGAGAACTaGGTGTACTGGGACAATAAG | + |
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Preference number: 2 (lower is better) Translates to: DQSPRGVTREAEPAVVAGASTEN*VYWDNK Trigger: CTTATTGTCCCAGTACACCCAGTTCTCAGTGGATGC...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | CTGTCAACCCAAACCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGAGGCTGCCCTCCTATaGCACAAAGCCAAGCCTTGC | + |
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Preference number: 2 (lower is better) Translates to: LSTQTQGHTQHEPGTAFWEAALL*HKAKPC Trigger: GCAAGGCTTGGCTTTGTGCCATAGGAGGGCAGCCTC...CCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGGTTTGGGTTGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CAA 90 bp | TTTGGTGCTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCTCCTaGTCACACGTCTGTCATCCTTGCCTGCCACCTGTTTCTCATGAG | + |
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Preference number: 2 (lower is better) Translates to: FGAVPWAWTLGPPVS*SHVCHPCLPPVSHE Trigger: CTCATGAGAAACAGGTGGCAGGCAAGGATGACAGACGTGTGACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTATCTACCTTGGATCATGGGCAAGGAGAGCCCATGCAGAGGCATGAACCCCAGCAGGAGCATCCACTaGGAACTGGGTGTACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: WYLPWIMGKESPCRGMNPSRSIH*ELGVLG Trigger: TCCCAGTACACCCAGTTCTCAGTGGATGCTCCTGCT...GGGGTTCATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAGGTAGATACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGTGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTTGCCTTTTGGGTGGGTaGAAGGTGCATTCATGTGCC | + |
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Preference number: 2 (lower is better) Translates to: KQCVRSGSCGCLSNPCWCCLLGG*KVHSCA Trigger: GGCACATGAATGCACCTTTCACCCACCCAAAAGGCA...ACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACACTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATGCCCATGCAGAGGCATaGACCCCTTTGTGGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHAHAEA*TPLWAK Trigger: TTTTGCCCACAAAGGGGTTCATGCCTCTGCATGGGC...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATGGCAAGGAGAGCCCATaGAGAGGCATGAACCCCTTT | + |
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Preference number: 2 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHGKESP*RGMNPF Trigger: AAAGGGGTTCATGCCTCTGCATGGGCTCTCCTTGCC...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR GCA 90 bp | ATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGACCCTCTGACTCCAGGTaGCCAGGGCACCCAGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: MRASYFSSSVHGKSSVHGPSDSR*PGHPAS Trigger: GGAAGCTGGGTGCCCTGGGCACCTGGAGTCAGAGGG...TCCGTGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGAAGGGAGCCAGCTAGATaGAGGAGGAACAGAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRREPAR*RRNRAS Trigger: CGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCT...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGATCAGAGCAGGTAAAGCCGGAGGACTTGTCATGAAAGTGGCGTGTCCAAGGGGTTCTTCGGGGTaGGGATGTGGCTACTCTAGC | + |
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Preference number: 2 (lower is better) Translates to: EGIRAGKAGGLVMKVACPRGSSG*GCGYSS Trigger: GCTAGAGTAGCCACATCCCCACCCCGAAGAACCCCT...TGGACACGCCACTTTCATGACAAGTCCTCCGGCTTTACCTGCTCTGATCCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTAGGCAAAAAGAGCAGTaGGTACAGAACCCAACTCTT | + |
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Preference number: 2 (lower is better) Translates to: DQSPRGVTREAEPAVVAGRQKEQ*VQNPTL Trigger: AAGAGTTGGGTTCTGTACCCACTGCTCTTTTTGCCT...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAGAGCCCATGCAGAGGCATGAACCCCTTTGTGGGCAAAAGGGCAGGGAACTTTCCCTCTACCGCTaGGTCTCTCTGCTATCCTAC | + |
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Preference number: 2 (lower is better) Translates to: QGEPMQRHEPLCGQKGRELSLYR*VSLLSY Trigger: GTAGGATAGCAGAGAGACCCAGCGGTAGAGGGAAAG...TTCCCTGCCCTTTTGCCCACAAAGGGGTTCATGCCTCTGCATGGGCTCTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR-3UTR CCA 90 bp | ATAGTGCTTCTCTTTGGTGCTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCTCTCCACAGTGTGGCTaGGGGGAGTTTTCAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: IVLLFGAVPWAWTLGPPVSPQCG*GEFSEA Trigger: GGCTTCTGAAAACTCCCCCCAGCCACACTGTGGAGA...GACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CAA 90 bp | GCTGCTGCTTCAAAGCAGTGTGTCCGCTCAGGCAGCTGTGGGTGTTaGTCCAACCCTTGCTGGTGTGTTCATAGGCCCAGAAGACATTCT | + |
|
Preference number: 2 (lower is better) Translates to: AAASKQCVRSGSCGC*SNPCWCVHRPRRHS Trigger: AGAATGTCTTCTGGGCCTATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CAA 90 bp | GCAATCTCTCCACATAGTGCTTCTCTTTGGTGCTGTTCCATGGGCTaGGACTCTGGGCCCTCCTGTCTCCTTGTCACACGTCTGTCATCC | + |
|
Preference number: 2 (lower is better) Translates to: AISPHSASLWCCSMG*DSGPSCLLVTRLSS Trigger: GGATGACAGACGTGTGACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR TCA 90 bp | TGGTATCTACCTTGGATCATGGGCAAGGAGAGCCCATGCAGAGGCATGAACCCCAGCCTTGCCTTTTTATaGGGTAAGGGAGGGGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: WYLPWIMGKESPCRGMNPSLAFL*GKGGAK Trigger: CTTGGCCCCTCCCTTACCTCATAAAAAGGCAAGGCT...GGGGTTCATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAGGTAGATACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGGATCAGAGCAGGTAAAGCCGGAGGACTTGTCATGAAAGTGGCGTGTCCATGCCTTTTGGGTGGGTaGAAGGTGCATTCATGTGCC | + |
|
Preference number: 2 (lower is better) Translates to: EGIRAGKAGGLVMKVACPCLLGG*KVHSCA Trigger: GGCACATGAATGCACCTTTCACCCACCCAAAAGGCA...TGGACACGCCACTTTCATGACAAGTCCTCCGGCTTTACCTGCTCTGATCCCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR GCA 90 bp | CCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTCCTTCCTTTCCGAGGTaGAATGAGACTTTCCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: PKDTHSMSLGLPFGWVKGPSFPR*NETFPL Trigger: TAGAGGGAAAGTCTCATTGCACCTCGGAAAGGAAGG...ACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATGAGAGCCTCGTATTTCTCGAAGACCCCTTCTTCTaGGACAGCTCAGAGCCCCGA | + |
|
Preference number: 2 (lower is better) Translates to: QIVKALTLLGPNESLVFLEDPFF*DSSEPR Trigger: TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTC...GAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGTGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGCATCCACTGAGAACTaGGTGTACTGGGACAATAAG | + |
|
Preference number: 2 (lower is better) Translates to: KQCVRSGSCGCLSNPCWCASTEN*VYWDNK Trigger: CTTATTGTCCCAGTACACCCAGTTCTCAGTGGATGC...ACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACACTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATGAGAGCCTCGTATTTCTCCCGCTCAGGCAGCTGTaGGTGTTTGTCCAACCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: QIVKALTLLGPNESLVFLPLRQL*VFVQPL Trigger: CAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGG...GAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATCCTTCCTTTCCGAGGTaGAATGAGACTTTCCCTCTA | + |
|
Preference number: 2 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHPSFPR*NETFPL Trigger: TAGAGGGAAAGTCTCATTGCACCTCGGAAAGGAAGG...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGACATCCCTGGTGCAAATaGCAGGAGGCTGCCCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: MRASYFSSSVHGKSSVHGHPWCK*QEAALL Trigger: TAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATG...TCCGTGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATGAGAGCCTCGTATTTCTCTCTCCACAGTGTGGCTaGGGGGAGTTTTCAGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QIVKALTLLGPNESLVFLSPQCG*GEFSEA Trigger: GGCTTCTGAAAACTCCCCCCAGCCACACTGTGGAGA...GAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CAA 90 bp | GGGGGAGGTGGGAATAGGAGAGGGTCTCTCTTGCTTTTTCCTGTTTaGAGCACCCTGGCATCACAGATGTCTCTCATCTGGCTAGTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: GGGGNRRGSLLLFPV*STLASQMSLIWLVF Trigger: AAAGACTAGCCAGATGAGAGACATCTGTGATGCCAGGGTGCTCAAAACAGGAAAAAGCAAGAGAGACCCTCTCCTATTCCCACCTCCCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | AACGAGAGAAAGAGATCCCAGCCAGCACCTCCTTCTACAAGGTACAAGGTTAGCAAAAGTCGAGGCTGGTaGCTGTGGAGGTCTCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: NERKRSQPAPPSTRYKVSKSRGW*LWRSPL Trigger: AAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT...GCTAACCTTGTACCTTGTAGAAGGAGGTGCTGGCTGGGATCTCTTTCTCTCGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | ATAGTGCTTCTCTTTGGTGCTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCCAGGGAAAGGCTCTCTaGGGAAGTTTAGCATTAAGT | + |
|
Preference number: 2 (lower is better) Translates to: IVLLFGAVPWAWTLGPPVQGKAL*GSLALS Trigger: ACTTAATGCTAAACTTCCCCAGAGAGCCTTTCCCTG...GACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGAAGGTGGAATTTTAGGTaGCACCCCCTCTCCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: MRASYFSSSVHGKSSVHGRWNFR*HPLSTV Trigger: CACTGTGGAGAGGGGGTGTCACCTAAAATTCCACCT...TCCGTGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTCTGGATTTGAGCATTTaGTCCCCAGCTGGTGGTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CINQAGLKLRDPPASQPVLDLSI*SPAGGV Trigger: TACACCACCAGCTGGGGATCAAATGCTCAAATCCAG...AACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAACTTACCCGCCAACTTAGCAAGCTaGGCCCTCACTACTGTGTGT | + |
|
Preference number: 2 (lower is better) Translates to: ILLPLSLFNARIKGLNLPANLAS*ALTTVC Trigger: ACACACAGTAGTGAGGGCTCAGCTTGCTAAGTTGGC...GGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGAAAAAGTCGAGGCTGGTaGCTGTGGAGGTCTCCACTT | + |
|
Preference number: 2 (lower is better) Translates to: MRASYFSSSVHGKSSVHGKSRGW*LWRSPL Trigger: AAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT...TCCGTGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR GCA 90 bp | CATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTACCAGTTCGCTCCCTCTaGTCCCTGTGTGTGAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: HKPGWLKTQRSSCLSACLPVRSL*SLCVNK Trigger: TTTATTCACACACAGGGAGCAGAGGGAGCGAACTGG...TAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACAGAAATGGATCCCTTaGAGGAAGGCTGCTTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PNESLVFLKLCPWEVICSQKWIP*RKAASS Trigger: AGAGGAAGCAGCCTTCCTGCAAGGGATCCATTTCTG...TGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCATTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CAA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTaGAGGTTTATAACCTCATTCCACTTCCAGTTCGCTCCCTCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: EVMEPQKHRLAGRPA*RFITSFHFQFAPSA Trigger: AGCAGAGGGAGCGAACTGGAAGTGGAATGAGGTTATAAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAAATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCAATATGGAAGGTAGCCTaGGTTTTTGCTCTGACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: PNESLVFLKLCPWEVICSIWKVA*VFALTG Trigger: CCCAGTCAGAGCAAAAACCCAGGCTACCTTCCATAT...TGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCATTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | AACGAGAGAAAGAGATCCCAGCCAGCACCTCCTTCTACAAGGTACAAGGTTAGCTTCCAGAAATGGATATaGAAGGTAGCCTGGGTTTTT | + |
|
Preference number: 2 (lower is better) Translates to: NERKRSQPAPPSTRYKVSFQKWI*KVAWVF Trigger: AAAAACCCAGGCTACCTTCCATATCCATTTCTGGAA...GCTAACCTTGTACCTTGTAGAAGGAGGTGCTGGCTGGGATCTCTTTCTCTCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | AACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAATAGGAACTACTTATaGTCACTTGGGCTCAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: NSEILLPLSLFNARIKGLNRNYL*SLGLRV Trigger: CACTCTGAGCCCAAGTGACCATAAGTAGTTCCTATT...CAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGAGAGAAAGAGATCCCAGCCAGCACCTCCTTCTACAAGGTACAAGGTTAGCAGTTTAACACAAAAGTaGTATCTACCTTGGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: NERKRSQPAPPSTRYKVSSLTQK*YLPWIM Trigger: CATGATCCAAGGTAGATACCACTTTTGTGTTAAACT...GCTAACCTTGTACCTTGTAGAAGGAGGTGCTGGCTGGGATCTCTTTCTCTCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CCA 90 bp | CAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATGAGAGCCTCGTATTTCTCAGTTTAACACAAAAGTaGTATCTACCTTGGATCATG | + |
|
Preference number: 2 (lower is better) Translates to: QIVKALTLLGPNESLVFLSLTQK*YLPWIM Trigger: CATGATCCAAGGTAGATACCACTTTTGTGTTAAACT...GAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR GCA 90 bp | CATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTACTTTCTTCTGTAAGTTaGTTTTCATCACCAGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HKPGWLKTQRSSCLSACLLSSVS*FSSPEK Trigger: CTTTTCTGGTGATGAAAAGCAACTTACAGAAGAAAG...TAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR CAA 90 bp | AGAGCAGTAGACACAGACCTAACCTTTAGCAATAATCAATGTCCTTaGGTATCTGTGCAAGTCAAAGTCCTAGAAAATCCTAAACCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: RAVDTDLTFSNNQCP*VSVQVKVLENPKPV Trigger: CACTGGTTTAGGATTTTCTAGGACTTTGACTTGCACAGATACCAAAGGACATTGATTATTGCTAAAGGTTAGGTCTGTGTCTACTGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR TCA 72 bp | GGCAGAGCCAGCAGTAGTGGCAGGTGCCAGAACGCCTaGAAGAGGGGACCCTTGCACTCCAGGAAGGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GRASSSGRCQNA*KRGPLHSRKGS Trigger: TGATCCCTTCCTGGAGTGCAAGGGTCCCCTCTTTCAGGCGTTCTGGCACCTGCCACTACTGCTGGCTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | GGTGGGTTGGTGGAGCACCCTATACGACAACCAGACTaGAGGGTCTTGCCGGGAATTGACCCAGGAGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GGLVEHPIRQPD*RVLPGIDPGGL Trigger: CAGCCCTCCTGGGTCAATTCCCGGCAAGACCCTGCAGTCTGGTTGTCGTATAGGGTGCTCCACCAACCCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | GGAGCCGAGCCGAGGTGCCCATTTAACTGCTGCTGCTaGTGCTTCAAAGCAGTGTGTCCGCTCAGGCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GAEPRCPFNCCC*CFKAVCPLRQL Trigger: CAGCTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | CAAGGAGCCGAGCCGAGGTGCCCATTTAACTGCTGCTaGTGCTGCTTCAAAGCAGTGTGTCCGCTCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QGAEPRCPFNCC*CCFKAVCPLRQ Trigger: CTGCCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | CGGGAATTGACCCAGGAGGGCTGCATCAAACATCCCTaGTGCAAATGCCAGGAGGCTGCCCTCCTATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: RELTQEGCIKHP*CKCQEAALLWH Trigger: GTGCCATAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGGGTCAATTCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | ACCCAGGAGGGCTGCATCAAACATCCCTGGTGCAAATaGCAGGAGGCTGCCCTCCTATGGCACAAAGCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TQEGCIKHPWCK*QEAALLWHKAK Trigger: CTTGGCTTTGTGCCATAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | ACTGCAGGGTCTTGCCGGGAATTGACCCAGGAGGGCTaGATCAAACATCCCTGGTGCAAATGCCAGGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TAGSCRELTQEG*IKHPWCKCQEA Trigger: AGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGGGTCAATTCCCGGCAAGACCCTGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | GATCAAGGAGCCGAGCCGAGGTGCCCATTTAACTGCTaGTGCTGCTGCTTCAAAGCAGTGTGTCCGCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DQGAEPRCPFNC*CCCFKAVCPLR Trigger: CCTGAGCGGACACACTGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR TCA 72 bp | CTTGGATCATGGGCAAGGAGAGCCCATGCAGAGGCATaGACCCCTTTGTGGGCAAAAGGGCAGGGAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LGSWARRAHAEA*TPLWAKGQGKA Trigger: AGCCTTTCCCTGCCCTTTTGCCCACAAAGGGGTTCATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | CACCAACACCTTCAGGAGCCCCCAATCTATGTCTCTTaGGTCCCGGGCACTAAGCACTGCCCATCCAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: HQHLQEPPIYVS*VPGTKHCPSRY Trigger: GTATCTGGATGGGCAGTGCTTAGTGCCCGGGACCCAAGAGACATAGATTGGGGGCTCCTGAAGGTGTTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | GACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTaGGTGAAAGGTGCATTCATGTGCCTAGGGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTHSMSLGLPFG*VKGAFMCLGLR Trigger: CCTCAGCCCTAGGCACATGAATGCACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTCCTAAGCTACTGACCTaGAGAGTCCCTCAAGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: PKDTHSMSLGLPFGWVKGPKLLT*RVPQVT Trigger: GGTCACTTGAGGGACTCTCAAGGTCAGTAGCTTAGG...ACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | CCAAGGGGGACCTTTAGAGCTCCTTCCTTTCCGAGGTaGAATGAGACTTTCCCTCTACCGCTGGGTCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: PRGTFRAPSFPR*NETFPLPLGLS Trigger: AGAGAGACCCAGCGGTAGAGGGAAAGTCTCATTGCACCTCGGAAAGGAAGGAGCTCTAAAGGTCCCCCTTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | GAATTGACCCAGGAGGGCTGCATCAAACATCCCTGGTaGAAATGCCAGGAGGCTGCCCTCCTATGGCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: ELTQEGCIKHPW*KCQEAALLWHK Trigger: TTTGTGCCATAGGAGGGCAGCCTCCTGGCATTTGCACCAGGGATGTTTGATGCAGCCCTCCTGGGTCAATTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | CAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTaGGTGGGTGAAAGGTGCATTCATGTGCCTAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QGHTQHEPGTAF*VGERCIHVPRA Trigger: AGCCCTAGGCACATGAATGCACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATCCTAAGCTACTGACCTaGAGAGTCCCTCAAGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHPKLLT*RVPQVT Trigger: GGTCACTTGAGGGACTCTCAAGGTCAGTAGCTTAGG...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR TCA 72 bp | ACACGTCTGTCATCCTTGCCTGCCACCTGTTTCTCATaGGTAGTCAAGTCTGGAGGGAAGGACCAGGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: TRLSSLPATCFS*VVKSGGKDQAQ Trigger: CTGTGCCTGGTCCTTCCCTCCAGACTTGACTACTCATGAGAAACAGGTGGCAGGCAAGGATGACAGACGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | TGGTATCTACCTTGGATCATGGGCAAGGAGAGCCCATaGAGAGGCATGAACCCCTTTGTGGGCAAAAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WYLPWIMGKESP*RGMNPFVGKRA Trigger: TGCCCTTTTGCCCACAAAGGGGTTCATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAGGTAGATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | GTGCTTGCATCACTAGATCAAGGAGCCGAGCCGAGGTaGCCATTTAACTGCTGCTGCTGCTGCTTCAAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VLASLDQGAEPR*PFNCCCCCFKA Trigger: TGCTTTGAAGCAGCAGCAGCAGCAGTTAAATGGGCACCTCGGCTCGGCTCCTTGATCTAGTGATGCAAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | CGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTaGTGTGTTCATAGGCCCAGAAGACATTCTGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RSGSCGCLSNPC*CVHRPRRHSEN Trigger: GTTCTCAGAATGTCTTCTGGGCCTATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | TCTCTCCACATAGTGCTTCTCTTTGGTGCTGTTCCATaGGCTTGGACTCTGGGCCCTCCTGTCTCCTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SLHIVLLFGAVP*AWTLGPPVSLS Trigger: TGACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | TCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGATaGAAAACCTGGGAGGCACGCCAGAACCATCCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSSVHGKSSVHG*KTWEARQNHPE Trigger: TTCTGGATGGTTCTGGCGTGCCTCCCAGGTTTTGCATCCGTGAACAGATGACTTCCCATGGACAGAGCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CAA 90 bp | GACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTGCATTCGCACAAAGCCAAGCCTaGCCTTTTTATGAGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: DTHSMSLGLPFGWVKGAFAQSQA*PFYEVR Trigger: CCTTACCTCATAAAAAGGCAAGGCTTGGCTTTGTGC...GAATGCACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR TCA 72 bp | ACAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATaGGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TDSKGSDPARPK*EPRISQALSMG Trigger: TCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | AATAAAGCAATCTCTCCACATAGTGCTTCTCTTTGGTaGTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: NKAISPHSASLW*CSMGLDSGPSC Trigger: ACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTATGTGGAGAGATTGCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR CCA 72 bp | GATGTGGCTACTCTAGCAGGAGCATCCACTGAGAACTaGGTGTACTGGGACAATAAGAAAGGGGAAAGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: DVATLAGASTEN*VYWDNKKGESG Trigger: TCCACTTTCCCCTTTCTTATTGTCCCAGTACACCCAGTTCTCAGTGGATGCTCCTGCTAGAGTAGCCACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | GTTTATAACCTCATTCCACTTCCAGTTCGCTCCCTCTaGTCCCTGTGTGTGAATAAAACGCTATCCCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: VYNLIPLPVRSL*SLCVNKTLSLH Trigger: GTGGAGGGATAGCGTTTTATTCACACACAGGGAGCAGAGGGAGCGAACTGGAAGTGGAATGAGGTTATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCACGGATTGCTTTTTCCTGTTTaGAGCACCCTGGCATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: MRASYFSSSVHGKSSVHGLLFPV*STLASQ Trigger: CTGTGATGCCAGGGTGCTCAAAACAGGAAAAAGCAA...TCCGTGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR-3UTR CAA 90 bp | CCAAATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCATTGCTTTTTCCTGTTTaGAGCACCCTGGCATCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PNESLVFLKLCPWEVICSLLFPV*STLASQ Trigger: CTGTGATGCCAGGGTGCTCAAAACAGGAAAAAGCAA...TGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCATTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| 3UTR GCA 72 bp | CATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTaGCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: HKPGWLKTQRSS*LSACLMLGLKA Trigger: GGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAAACCTTTCTTCTGTAAGTaGCTTTTCATCACCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSLPAPVPPLSLRNPKTKPFFCK*LFITRK Trigger: TTTTCTGGTGATGAAAAGCAACTTACAGAAGAAAGG...TTTTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR TCA 72 bp | AGTTGTGTACATAATGTCCTAGCCAACTTAGCAAGCTaGGCCCTCACTACTGTGTGTTACTTATGCGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SCVHNVLANLAS*ALTTVCYLCGE Trigger: TTCACCGCATAAGTAACACACAGTAGTGAGGGCTCAGCTTGCTAAGTTGGCTAGGACATTATGTACACAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR TCA 72 bp | TGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTaGACTTACCCTGACATCTTTAAACAGTGTTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: CLSACLMLGLKA*TYPDIFKQCYP Trigger: AGGGTAACACTGTTTAAAGATGTCAGGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR CCA 72 bp | TCCTTATTTATTAGATTTCAGATACATGGGACTGGATaGGAGATAATCCCAGGGCATGTAGTTTACATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SLFIRFQIHGTG*EIIPGHVVYMR Trigger: CCTCATGTAAACTACATGCCCTGGGATTATCTCCCATCCAGTCCCATGTATCTGAAATCTAATAAATAAGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCTGGGGCTGTGGTGGCTaGGGGCATCAATGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGCGGLHLDRVRPSMCWAWGCGG*GHQCPR Trigger: CCTCGGGCATTGATGCCCTCAGCCACCACAGCCCCA...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCAGTCCTCGTAGCTCTTaGGGCACGGGTTGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGCGGLHLDRVRPSMCWASPRSS*GTGCLP Trigger: TGGGAGGCAACCCGTGCCGCAAGAGCTACGAGGACT...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCCGTCGCTTGTACTTCTaGCGGCCTCCTCGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GGCGGLHLDRVRPSMCWARRLYF*RPPRTR Trigger: CCGAGTTCGAGGAGGCCGCCAGAAGTACAAGCGACG...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTGGGTGCTCAGGGCAATaGCAAAGCCACCACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: DQSPRGVTREAEPAVVAGGCSGQ*QSHHWR Trigger: ACGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCC...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTGCTTTGGCGGCTGTCTaGCTCAGCAGGGGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PICCPQESAHGQEARRPLALAAV*LSRGSV Trigger: GACGCTGCCCCTGCTGAGGCAGACAGCCGCCAAAGC...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGTGGGGCTGTGGTGGCTaGGGGCATCAATGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CCPQESAHGQEARRPLLLWGCGG*GHQCPR Trigger: CCTCGGGCATTGATGCCCTCAGCCACCACAGCCCCA...CAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGATGAATCGGCAGGCCTaGCAGGACTTGCGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQMNRQA*QDLRLR Trigger: ACGGAGGCGCAAGTCCTGTCAGGCCTGCCGATTCAT...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTGACCGTTGGCGTGGGTaGTCAGGGCAATGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRDRWRG*SGQCQS Trigger: GCTTTGGCATTGCCCTGAGCACCCACGCCAACGGTC...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTAGGTCCTGGAGCTTCTaGACCGCCTCCAGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: DQSPRGVTREAEPAVVAGRSWSF*TASRFS Trigger: TGAGAACCTGGAGGCGGTGCAGAAGCTCCAGGACCT...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTGCTTTGGCGGCTGTCTaGCTCAGCAGGGGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PGVCTWPGSKKTPSSGTAALAAV*LSRGSV Trigger: GACGCTGCCCCTGCTGAGGCAGACAGCCGCCAAAGC...AGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCTCCAGACCGTTGGCGTaGGTGCTCAGGGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KVEAGGCGGLHLDRVRPSSRPLA*VLRAMP Trigger: TGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGA...GGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | CTGTCAACCCAAACCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGTGGGGCTGTGGTGGCTaGGGGCATCAATGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTQTQGHTQHEPGTAFWWGCGG*GHQCPR Trigger: CCTCGGGCATTGATGCCCTCAGCCACCACAGCCCCA...CCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGGTTTGGGTTGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCATGAATCGGCAGGCCTaGCAGGACTTGCGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KSRGWWLWRSPLGSCPSVMNRQA*QDLRLR Trigger: ACGGAGGCGCAAGTCCTGTCAGGCCTGCCGATTCAT...GACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCACACGATGCCCAAGATaGGAATCTCCATCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GGCGGLHLDRVRPSMCWATRCPR*ESPSRH Trigger: GTGCCTGGATGGAGATTCTCATCTTGGGCATCGTGT...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGATGCGGGTGTGGGTGCTCAGGGCAATaGCAAAGCCACCACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKQEDPFFWDSSEPRCGCGCSGQ*QSHHWR Trigger: ACGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCC...ACACCCGCATCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCAGGTCCTGGAGCTTCTaGACCGCCTCCAGGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVEAGGCGGLHLDRVRPSRSWSF*TASRFS Trigger: TGAGAACCTGGAGGCGGTGCAGAAGCTCCAGGACCT...GGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTGCACCAGCTGCAGGATaGCTCGGTAAAGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRAPAAG*LGKGPA Trigger: TGCTGGACCTTTACCGAGCCATCCTGCAGCTGGTGC...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | CCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTAGTCCTCGTAGCTCTTaGGGCACGGGTTGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PKDTHSMSLGLPFGWVKGSPRSS*GTGCLP Trigger: TGGGAGGCAACCCGTGCCGCAAGAGCTACGAGGACT...ACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | TGCCACACGGAACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATTCCAGACCGTTGGCGTaGGTGCTCAGGGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CHTEPSLPAPVPPLSLRNSRPLA*VLRAMP Trigger: TGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGA...ATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTTCCGTGTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTTCCAGACCGTTGGCGTaGGTGCTCAGGGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGVCTWPGSKKTPSSGTASRPLA*VLRAMP Trigger: TGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGA...AGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCAGACTGGGGAAGCCTaGGATGTGCTTGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PICCPQESAHGQEARRPLQTGEA*DVLGPV Trigger: AACTGGGCCAAGCACATCCCAGGCTTCCCCAGTCTG...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTTCGTGCAGCAGGTCCTaGAGCTTCTGCACCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ICCPQESAHGQEARRPLLSCSRS*SFCTAS Trigger: GGAGGCGGTGCAGAAGCTCCAGGACCTGCTGCACGA...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATTCGTGCAGCAGGTCCTaGAGCTTCTGCACCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHSCSRS*SFCTAS Trigger: GGAGGCGGTGCAGAAGCTCCAGGACCTGCTGCACGA...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | AAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCACACGATGCCCAAGATaGGAATCTCCATCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVEAGGCGGLHLDRVRPSTRCPR*ESPSRH Trigger: GTGCCTGGATGGAGATTCTCATCTTGGGCATCGTGT...GGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | TGCATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTCGTGCCACCCTTACCTaGGTTGGCGAGGGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CINQAGLKLRDPPASQPVRATLT*VGEGQG Trigger: GCCCTGGCCCTCGCCAACTCAGGTAAGGGTGGCACG...AACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTAGTCCTCGTAGCTCTTaGGGCACGGGTTGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ICCPQESAHGQEARRPLLSPRSS*GTGCLP Trigger: TGGGAGGCAACCCGTGCCGCAAGAGCTACGAGGACT...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATTCCAGACCGTTGGCGTaGGTGCTCAGGGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHSRPLA*VLRAMP Trigger: TGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGA...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCGTCGCTTGTACTTCTaGCGGCCTCCTCGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ICCPQESAHGQEARRPLLRRLYF*RPPRTR Trigger: CCGAGTTCGAGGAGGCCGCCAGAAGTACAAGCGACG...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | GACCAGTCTCCTAGAGGTGTCACCCGGGAGGCAGAGCCAGCAGTAGTGGCAGGTTGGCTTTTTAGCAGGTaGGGAAATCGGCAGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DQSPRGVTREAEPAVVAGWLFSR*GNRQVQ Trigger: CTGAACCTGCCGATTTCCCCACCTGCTAAAAAGCCA...ACCTGCCACTACTGCTGGCTCTGCCTCCCGGGTGACACCTCTAGGAGACTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTTGCAGCAGGCTCATCTaGTCCCCAAGTGTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PICCPQESAHGQEARRPLCSRLI*SPSVRL Trigger: CAGTCTGACACTTGGGGACCAGATGAGCCTGCTGCA...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGCACCAGCTGCAGGATaGCTCGGTAAAGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CCPQESAHGQEARRPLLLAPAAG*LGKGPA Trigger: TGCTGGACCTTTACCGAGCCATCCTGCAGCTGGTGC...CAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGATCGTGCAGCAGGTCCTaGAGCTTCTGCACCGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRSCSRS*SFCTAS Trigger: GGAGGCGGTGCAGAAGCTCCAGGACCTGCTGCACGA...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CAA 72 bp | GTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCTCCTaGTCACACGTCTGTCATCCTTGCCTGCCACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VPWAWTLGPPVS*SHVCHPCLPPV Trigger: AACAGGTGGCAGGCAAGGATGACAGACGTGTGACAAGGAGACAGGAGGGCCCAGAGTCCAAGCCCATGGAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | AAAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCTGCGCCTCCGTTTGGTaGTCTCACATTCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KSRGWWLWRSPLGSCPSVCASVW*SHIHWW Trigger: CCACCAATGAATGTGAGATCACCAAACGGAGGCGCA...GACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | CCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTGAGTGGTCAGGGCCTTaGTATCTCCCTCGGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: PKDTHSMSLGLPFGWVKGEWSGP*YLPRGY Trigger: ATATCCCCGAGGGAGATATCAAGGCCCTGACCACTC...ACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | GGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGAGTCCCTGGGTGCTCAGGGCAATaGCAAAGCCACCACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLCYPTPQPKLLTLRVPGCSGQ*QSHHWR Trigger: ACGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCC...AGGGACTCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTCACAAGCTCCCGATCTaGCAATTCACAGAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRHKLPI*QFTESG Trigger: ACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTG...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTATAGTCCTCGGCGTATaGCAGCTTGTCATCGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRIVLGV*QLVIVW Trigger: CCATACGATGACAAGCTGGCATACGCCGAGGACTAT...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGACAAGGGGGTCCGGGATaGAGAGTTCGGACACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRQGGPG*RVRTRP Trigger: TGGACGTGTCCGAACTCTGCATCCCGGACCCCCTTG...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110204.9 |
||
| CDS-3UTR CCA 90 bp | GACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTGCATTCCAGACTGGGGAAGCCTaGGATGTGCTTGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DTHSMSLGLPFGWVKGAFQTGEA*DVLGPV Trigger: AACTGGGCCAAGCACATCCCAGGCTTCCCCAGTCTG...GAATGCACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGTGCAGCAGGCTCATCTaGTCCCCAAGTGTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: CCPQESAHGQEARRPLLLCSRLI*SPSVRL Trigger: CAGTCTGACACTTGGGGACCAGATGAGCCTGCTGCA...CAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCAGCTTGTCATCGTATaGGAGCGAGCGGTACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PICCPQESAHGQEARRPLQLVIV*ERAVHD Trigger: ATCGTGTACCGCTCGCTCCCATACGATGACAAGCTG...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTGCACCAGCTGCAGGATaGCTCGGTAAAGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ICCPQESAHGQEARRPLLAPAAG*LGKGPA Trigger: TGCTGGACCTTTACCGAGCCATCCTGCAGCTGGTGC...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | ATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAACTTACCCTGGGGCTGTGGTGGCTaGGGGCATCAATGCCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLPLSLFNARIKGLNLPWGCGG*GHQCPR Trigger: CCTCGGGCATTGATGCCCTCAGCCACCACAGCCCCA...GGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
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| CDS-3UTR TCA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGAGTGGTCAGGGCCTTaGTATCTCCCTCGGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: ESAHGQEARRPLLLGQLREWSGP*YLPRGY Trigger: ATATCCCCGAGGGAGATATCAAGGCCCTGACCACTC...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | ATAGTGCTTCTCTTTGGTGCTGTTCCATGGGCTTGGACTCTGGGCCCTCCTGTCGAGTGGTCAGGGCCTTaGTATCTCCCTCGGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: IVLLFGAVPWAWTLGPPVEWSGP*YLPRGY Trigger: ATATCCCCGAGGGAGATATCAAGGCCCTGACCACTC...GACAGGAGGGCCCAGAGTCCAAGCCCATGGAACAGCACCAAAGAGAAGCACTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | AAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCAGTGTTCCTCATCCATaGTATAGTCCTCGGCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: KVEAGGCGGLHLDRVRPSSVPHP*YSPRRM Trigger: CATACGCCGAGGACTATATCATGGATGAGGAACACT...GGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | CACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGACACAAGCTCCCGATCTaGCAATTCACAGAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HMARKQEDPFFWDSSEPRHKLPI*QFTESG Trigger: ACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTG...TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | CACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGAATAGTCCTCGGCGTATaGCAGCTTGTCATCGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HMARKQEDPFFWDSSEPRIVLGV*QLVIVW Trigger: CCATACGATGACAAGCTGGCATACGCCGAGGACTAT...TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTTCTCACATTCATTGGTaGCCGGGCAGTTGTACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: PICCPQESAHGQEARRPLSHIHW*PGSCTR Trigger: TCGAGTACAACTGCCCGGCCACCAATGAATGTGAGA...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGATGCAGCAGGCTCATCTaGTCCCCAAGTGTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESAHGQEARRPLLLGQLRCSRLI*SPSVRL Trigger: CAGTCTGACACTTGGGGACCAGATGAGCCTGCTGCA...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | CCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTCAGCTTGTCATCGTATaGGAGCGAGCGGTACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PKDTHSMSLGLPFGWVKGQLVIV*ERAVHD Trigger: ATCGTGTACCGCTCGCTCCCATACGATGACAAGCTG...ACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| 3UTR CAA 72 bp | TCAAAGCAGTGTGTCCGCTCAGGCAGCTGTGGGTGTTaGTCCAACCCTTGCTGGTGTGTTCATAGGCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SKQCVRSGSCGC*SNPCWCVHRPR Trigger: TCTGGGCCTATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACACTGCTTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | CTGTCAACCCAAACCCAAGGACACACACAGCATGAGCCTGGGACTGCCTTTTGGTGCGCCTCCGTTTGGTaGTCTCACATTCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTQTQGHTQHEPGTAFWCASVW*SHIHWW Trigger: CCACCAATGAATGTGAGATCACCAAACGGAGGCGCA...CCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTCCTTGGGTTTGGGTTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | TGCATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTATGAATCGGCAGGCCTaGCAGGACTTGCGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CINQAGLKLRDPPASQPVMNRQA*QDLRLR Trigger: ACGGAGGCGCAAGTCCTGTCAGGCCTGCCGATTCAT...AACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
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| CDS-3UTR TCA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCCTTCTCTACCTTaGGTTTCTTGTACCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PICCPQESAHGQEARRPLLPSLP*VSCTCA Trigger: TGCGCAGGTACAAGAAACTCAAGGTAGAGAAGGAAG...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | CCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTTGGCTTTTTAGCAGGTaGGGAAATCGGCAGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PGVCTWPGSKKTPSSGTAWLFSR*GNRQVQ Trigger: CTGAACCTGCCGATTTCCCCACCTGCTAAAAAGCCA...AGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CCA 90 bp | TGGTATCTACCTTGGATCATGGGCAAGGAGAGCCCATGCAGAGGCATGAACCCCCAGCTTGTCATCGTATaGGAGCGAGCGGTACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: WYLPWIMGKESPCRGMNPQLVIV*ERAVHD Trigger: ATCGTGTACCGCTCGCTCCCATACGATGACAAGCTG...GGGGTTCATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAGGTAGATACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | GAAGGGATCAGAGCAGGTAAAGCCGGAGGACTTGTCATGAAAGTGGCGTGTCCATGCGCCTCCGTTTGGTaGTCTCACATTCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EGIRAGKAGGLVMKVACPCASVW*SHIHWW Trigger: CCACCAATGAATGTGAGATCACCAAACGGAGGCGCA...TGGACACGCCACTTTCATGACAAGTCCTCCGGCTTTACCTGCTCTGATCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | AACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAGAGTGGTCAGGGCCTTaGTATCTCCCTCGGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: NLRSLLQYLLYPSGILRQEWSGP*YLPRGY Trigger: ATATCCCCGAGGGAGATATCAAGGCCCTGACCACTC...TTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
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| CDS-3UTR TCA 90 bp | TGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGAGTGTTCCTCATCCATaGTATAGTCCTCGGCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: CCPQESAHGQEARRPLLLSVPHP*YSPRRM Trigger: CATACGCCGAGGACTATATCATGGATGAGGAACACT...CAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR TCA 90 bp | CAAGGAGAGCCCATGCAGAGGCATGAACCCCTTTGTGGGCAAAAGGGCAGGGAACTTCCTTCTCTACCTTaGGTTTCTTGTACCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGEPMQRHEPLCGQKGRELPSLP*VSCTCA Trigger: TGCGCAGGTACAAGAAACTCAAGGTAGAGAAGGAAG...TTCCCTGCCCTTTTGCCCACAAAGGGGTTCATGCCTCTGCATGGGCTCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | AACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGGGGTGCTCAGGGCAATaGCAAAGCCACCACTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: NSEILLPLSLFNARIKGLGCSGQ*QSHHWR Trigger: ACGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCC...CAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
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| CDS-3UTR GCA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCACAAGCTCCCGATCTaGCAATTCACAGAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ICCPQESAHGQEARRPLLHKLPI*QFTESG Trigger: ACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTG...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR GCA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAATAGTCCTCGGCGTATaGCAGCTTGTCATCGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ESAHGQEARRPLLLGQLRIVLGV*QLVIVW Trigger: CCATACGATGACAAGCTGGCATACGCCGAGGACTAT...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | TTTTCCAGAATGAACCGCTTCATCTTTAGGACATCCTGTCAACCCAAACCCAAGGCTTTGGCGGCTGTCTaGCTCAGCAGGGGCAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSRMNRFIFRTSCQPKPKALAAV*LSRGSV Trigger: GACGCTGCCCCTGCTGAGGCAGACAGCCGCCAAAGC...CTTGGGTTTGGGTTGACAGGATGTCCTAAAGATGAAGCGGTTCATTCTGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | ATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAACTTACCCCGTCGCTTGTACTTCTaGCGGCCTCCTCGAACTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLPLSLFNARIKGLNLPRRLYF*RPPRTR Trigger: CCGAGTTCGAGGAGGCCGCCAGAAGTACAAGCGACG...GGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CCA 90 bp | AACGAGAGAAAGAGATCCCAGCCAGCACCTCCTTCTACAAGGTACAAGGTTAGCCAGACTGGGGAAGCCTaGGATGTGCTTGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NERKRSQPAPPSTRYKVSQTGEA*DVLGPV Trigger: AACTGGGCCAAGCACATCCCAGGCTTCCCCAGTCTG...GCTAACCTTGTACCTTGTAGAAGGAGGTGCTGGCTGGGATCTCTTTCTCTCGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTTGAATGGTTCTCTTaGAGAACGCCTTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ICCPQESAHGQEARRPLLLEWFS*RTPCKP Trigger: AGGCTTGCAAGGCGTTCTTCAAGAGAACCATTCAAG...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | AAAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCTACTCGATGTTGCCTTaGATGGTTCTCTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KSRGWWLWRSPLGSCPSVYSMLP*MVLLKN Trigger: GTTCTTCAAGAGAACCATTCAAGGCAACATCGAGTA...GACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | CACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGATACTCGATGTTGCCTTaGATGGTTCTCTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HMARKQEDPFFWDSSEPRYSMLP*MVLLKN Trigger: GTTCTTCAAGAGAACCATTCAAGGCAACATCGAGTA...TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGACTTCCTTCTCTACCTTaGGTTTCTTGTACCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ESAHGQEARRPLLLGQLRLPSLP*VSCTCA Trigger: TGCGCAGGTACAAGAAACTCAAGGTAGAGAAGGAAG...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | AACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGCAGACTGGGGAAGCCTaGGATGTGCTTGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NSEILLPLSLFNARIKGLQTGEA*DVLGPV Trigger: AACTGGGCCAAGCACATCCCAGGCTTCCCCAGTCTG...CAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CCA 90 bp | CATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTAGCACCAGCTGCAGGATaGCTCGGTAAAGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKPGWLKTQRSSCLSACLAPAAG*LGKGPA Trigger: TGCTGGACCTTTACCGAGCCATCCTGCAGCTGGTGC...TAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTTACTCGATGTTGCCTTaGATGGTTCTCTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PGVCTWPGSKKTPSSGTAYSMLP*MVLLKN Trigger: GTTCTTCAAGAGAACCATTCAAGGCAACATCGAGTA...AGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | TGCATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTACACGATGCCCAAGATaGGAATCTCCATCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CINQAGLKLRDPPASQPVTRCPR*ESPSRH Trigger: GTGCCTGGATGGAGATTCTCATCTTGGGCATCGTGT...AACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR TCA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGAAGTGTTCCTCATCCATaGTATAGTCCTCGGCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRSVPHP*YSPRRM Trigger: CATACGCCGAGGACTATATCATGGATGAGGAACACT...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTTGAGGTTTAGTCCTCGTAGCTCTTaGGGCACGGGTTGCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVMEPQKHRLAGRPALRFSPRSS*GTGCLP Trigger: TGGGAGGCAACCCGTGCCGCAAGAGCTACGAGGACT...AAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAAACACAAGCTCCCGATCTaGCAATTCACAGAGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSLPAPVPPLSLRNPKTKHKLPI*QFTESG Trigger: ACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTG...TTTTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTTGAGGTTTCAAGGGGGTCCGGGATaGAGAGTTCGGACACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVMEPQKHRLAGRPALRFQGGPG*RVRTRP Trigger: TGGACGTGTCCGAACTCTGCATCCCGGACCCCCTTG...AAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR TCA 90 bp | AACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAAGTGTTCCTCATCCATaGTATAGTCCTCGGCGTATG | + |
|
Preference number: 4 (lower is better) Translates to: NLRSLLQYLLYPSGILRQSVPHP*YSPRRM Trigger: CATACGCCGAGGACTATATCATGGATGAGGAACACT...TTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CCA 90 bp | CAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATGAGAGCCTCGTATTTCTCTGGCTTTTTAGCAGGTaGGGAAATCGGCAGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QIVKALTLLGPNESLVFLWLFSR*GNRQVQ Trigger: CTGAACCTGCCGATTTCCCCACCTGCTAAAAAGCCA...GAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | CATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTACAGCTTGTCATCGTATaGGAGCGAGCGGTACACGAT | + |
|
Preference number: 4 (lower is better) Translates to: HKPGWLKTQRSSCLSACLQLVIV*ERAVHD Trigger: ATCGTGTACCGCTCGCTCCCATACGATGACAAGCTG...TAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR CAA 72 bp | GGGAATAGGAGAGGGTCTCTCTTGCTTTTTCCTGTTTaGAGCACCCTGGCATCACAGATGTCTCTCATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GNRRGSLLLFPV*STLASQMSLIW Trigger: CCAGATGAGAGACATCTGTGATGCCAGGGTGCTCAAAACAGGAAAAAGCAAGAGAGACCCTCTCCTATTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR GCA 90 bp | ATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAACTTACCCATAGTCCTCGGCGTATaGCAGCTTGTCATCGTATGG | + |
|
Preference number: 4 (lower is better) Translates to: ILLPLSLFNARIKGLNLPIVLGV*QLVIVW Trigger: CCATACGATGACAAGCTGGCATACGCCGAGGACTAT...GGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CCA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTTGAGGTTTTGCAGCAGGCTCATCTaGTCCCCAAGTGTCAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: EVMEPQKHRLAGRPALRFCSRLI*SPSVRL Trigger: CAGTCTGACACTTGGGGACCAGATGAGCCTGCTGCA...AAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAAATACTCGATGTTGCCTTaGATGGTTCTCTTGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPAPVPPLSLRNPKTKYSMLP*MVLLKN Trigger: GTTCTTCAAGAGAACCATTCAAGGCAACATCGAGTA...TTTTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR TCA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTTGAGGTTTTGCGCCTCCGTTTGGTaGTCTCACATTCATTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EVMEPQKHRLAGRPALRFCASVW*SHIHWW Trigger: CCACCAATGAATGTGAGATCACCAAACGGAGGCGCA...AAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCCAGAATGAACCGCTTCATCTTTAGGACATCCTGTCAACCCAAACCCAAGACACGATGCCCAAGATaGGAATCTCCATCCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSRMNRFIFRTSCQPKPKTRCPR*ESPSRH Trigger: GTGCCTGGATGGAGATTCTCATCTTGGGCATCGTGT...CTTGGGTTTGGGTTGACAGGATGTCCTAAAGATGAAGCGGTTCATTCTGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR TCA 90 bp | AACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGCTTCCTTCTCTACCTTaGGTTTCTTGTACCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSEILLPLSLFNARIKGLLPSLP*VSCTCA Trigger: TGCGCAGGTACAAGAAACTCAAGGTAGAGAAGGAAG...CAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR CAA 72 bp | GAGTTAACCCAGTTTAACACAAAAGTGGTATCTACCTaGGATCATGGGCAAGGAGAGCCCATGCAGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ELTQFNTKVVST*DHGQGEPMQRH Trigger: ATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAGGTAGATACCACTTTTGTGTTAAACTGGGTTAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CCA 90 bp | GTGTATATAGAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTGGCTTTTTAGCAGGTaGGGAAATCGGCAGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYIEVMEPQKHRLAGRPAWLFSR*GNRQVQ Trigger: CTGAACCTGCCGATTTCCCCACCTGCTAAAAAGCCA...AGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTCTATATACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR CAA 72 bp | GAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTaGAGGTTTATAACCTCATTCCACTTCCAGTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: EPQKHRLAGRPA*RFITSFHFQFA Trigger: AGCGAACTGGAAGTGGAATGAGGTTATAAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| 3UTR CAA 72 bp | GACACAGACCTAACCTTTAGCAATAATCAATGTCCTTaGGTATCTGTGCAAGTCAAAGTCCTAGAAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: DTDLTFSNNQCP*VSVQVKVLENP Trigger: AGGATTTTCTAGGACTTTGACTTGCACAGATACCAAAGGACATTGATTATTGCTAAAGGTTAGGTCTGTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS GCA 90 bp | GTCCTCGTAGCTCTTGCGGCACGGGTTGCCTCCCAGCCCCGCACCTaGGAACATAGGCGGCGAGTCCAGACCGTTGGCGTGGGTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLVALAARVASQPRT*EHRRRVQTVGVGAQ Trigger: CTGAGCACCCACGCCAACGGTCTGGACTCGCCGCCTATGTTCGCAGGTGCGGGGCTGGGAGGCAACCCGTGCCGCAAGAGCTACGAGGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CCA 90 bp | AGCCCCGCACCTGCGAACATAGGCGGCGAGTCCAGACCGTTGGCGTaGGTGCTCAGGGCAATGCCAAAGCCACCACTGGCGTCCGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPAPANIGGESRPLA*VLRAMPKPPLASDE Trigger: CTCGTCGGACGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGACTCGCCGCCTATGTTCGCAGGTGCGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS-3UTR CAA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTCTCTTGCGGCACGGGTaGCCTCCCAGCCCCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRLLRHG*PPSPAP Trigger: AGGTGCGGGGCTGGGAGGCAACCCGTGCCGCAAGAG...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
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| CDS-3UTR CAA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTAGCGTCAGCAGCAGCTaGCCGGCCCTCCGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PICCPQESAHGQEARRPLSVSSS*PALRGS Trigger: GGAGCCGCGGAGGGCCGGCAAGCTGCTGCTGACGCT...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCGGCGAGTCCAGACCGTaGGCGTGGGTGCTCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSRGWWLWRSPLGSCPSVGESRP*AWVLRA Trigger: TGCCCTGAGCACCCACGCCAACGGTCTGGACTCGCC...GACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAAGCGTCAGCAGCAGCTaGCCGGCCCTCCGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESAHGQEARRPLLLGQLRSVSSS*PALRGS Trigger: GGAGCCGCGGAGGGCCGGCAAGCTGCTGCTGACGCT...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTCTTGCGGCACGGGTaGCCTCCCAGCCCCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ICCPQESAHGQEARRPLLLLRHG*PPSPAP Trigger: AGGTGCGGGGCTGGGAGGCAACCCGTGCCGCAAGAG...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGACTCTTGCGGCACGGGTaGCCTCCCAGCCCCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ESAHGQEARRPLLLGQLRLLRHG*PPSPAP Trigger: AGGTGCGGGGCTGGGAGGCAACCCGTGCCGCAAGAG...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCCCCTCGGGGATATCGTaGGGAGGCATAGCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGCGGLHLDRVRPSMCWAPSGIS*GGIAYS Trigger: GCTGTATGCTATGCCTCCCAACGATATCCCCGAGGG...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | CACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGAACGAGGCACAGGCGCTaGGGGATGGCGTTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: HMARKQEDPFFWDSSEPRTRHRR*GMALSM Trigger: CATGCTTAACGCCATCCCCAAGCGCCTGTGCCTCGT...TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | CACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGAGAATCCAGCCGTCGCTaGTACTTCTGGCGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HMARKQEDPFFWDSSEPRESSRR*YFWRPP Trigger: AGGAGGCCGCCAGAAGTACAAGCGACGGCTGGATTC...TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCGGCATAGCATACAGCTaGTCCTGCTCAACCCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GGCGGLHLDRVRPSMCWAGIAYS*SCSTPS Trigger: ACTAGGGGTTGAGCAGGACAAGCTGTATGCTATGCC...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGCCCTCGGGGATATCGTaGGGAGGCATAGCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQPSGIS*GGIAYS Trigger: GCTGTATGCTATGCCTCCCAACGATATCCCCGAGGG...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCATGTGCTGGGCCATGTGCTTGGCCCAGTaGATGAGGAACACAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGCGGLHLDRVRPSMCWAMCLAQ*MRNTSS Trigger: GGAGCTTGTGTTCCTCATCAACTGGGCCAAGCACAT...GGCCCAGCACATGGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | CAGATAGTAAAGGCTCTGACCCTGCTAGGCCCAAATGAGAGCCTCGTATTTCTCAGCGTCAGCAGCAGCTaGCCGGCCCTCCGCGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QIVKALTLLGPNESLVFLSVSSS*PALRGS Trigger: GGAGCCGCGGAGGGCCGGCAAGCTGCTGCTGACGCT...GAGAAATACGAGGCTCTCATTTGGGCCTAGCAGGGTCAGAGCCTTTACTATCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAGACGTCTGGATGGCTCCGTCTaGATGAAGGAGCCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: GSQLDGGGTEPRDRPQRRLDGSV*MKEPQL Trigger: TAGTTGCGGCTCCTTCATCAAGACGGAGCCATCCAG...ACGTCTCTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCCCTGGATGGCTCCGTCTaGATGAAGGAGCCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: KVEAGGCGGLHLDRVRPSLDGSV*MKEPQL Trigger: TAGTTGCGGCTCCTTCATCAAGACGGAGCCATCCAG...GGACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGCTGGATGGCTCCGTCTaGATGAAGGAGCCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQLDGSV*MKEPQL Trigger: TAGTTGCGGCTCCTTCATCAAGACGGAGCCATCCAG...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGAAGCCTGGGATGTGCTaGGCCCAGTTGATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQKPGMC*AQLMRN Trigger: GTTCCTCATCAACTGGGCCAAGCACATCCCAGGCTT...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | ATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAACTTACCCCTCTTGCGGCACGGGTaGCCTCCCAGCCCCGCACCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLPLSLFNARIKGLNLPLLRHG*PPSPAP Trigger: AGGTGCGGGGCTGGGAGGCAACCCGTGCCGCAAGAG...GGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATACGAGGCACAGGCGCTaGGGGATGGCGTTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHTRHRR*GMALSM Trigger: CATGCTTAACGCCATCCCCAAGCGCCTGTGCCTCGT...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | TGGTATCTACCTTGGATCATGGGCAAGGAGAGCCCATGCAGAGGCATGAACCCCGAATCCAGCCGTCGCTaGTACTTCTGGCGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WYLPWIMGKESPCRGMNPESSRR*YFWRPP Trigger: AGGAGGCCGCCAGAAGTACAAGCGACGGCTGGATTC...GGGGTTCATGCCTCTGCATGGGCTCTCCTTGCCCATGATCCAAGGTAGATACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | TGCCACACGGAACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCCTCGGGGATATCGTaGGGAGGCATAGCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: CHTEPSLPAPVPPLSLRNPSGIS*GGIAYS Trigger: GCTGTATGCTATGCCTCCCAACGATATCCCCGAGGG...ATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTTCCGTGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTAGAGTGGTCAGGGCCTaGATATCTCCCTCGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: PICCPQESAHGQEARRPLRVVRA*ISPSGI Trigger: TATCCCCGAGGGAGATATCAAGGCCCTGACCACTCT...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGATGTGCTTGGCCCAGTaGATGAGGAACACAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQMCLAQ*MRNTSS Trigger: GGAGCTTGTGTTCCTCATCAACTGGGCCAAGCACAT...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCAAGCCTGGGATGTGCTaGGCCCAGTTGATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KSRGWWLWRSPLGSCPSVKPGMC*AQLMRN Trigger: GTTCCTCATCAACTGGGCCAAGCACATCCCAGGCTT...GACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | CCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTGCGAGGGCCAGGGCCTaGAGGATCATAAACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGVCTWPGSKKTPSSGTAARARA*RIINSS Trigger: GGAAGAGTTTATGATCCTCAAGGCCCTGGCCCTCGC...AGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | TGCCACACGGAACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCTGGATGGCTCCGTCTaGATGAAGGAGCCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: CHTEPSLPAPVPPLSLRNLDGSV*MKEPQL Trigger: TAGTTGCGGCTCCTTCATCAAGACGGAGCCATCCAG...ATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTTCCGTGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | CCCATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTAGCATGTACTCGCATTaGATGGCGGAGTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PICCPQESAHGQEARRPLSMYSH*MAESSM Trigger: CATGGAGGACTCCGCCATCAAATGCGAGTACATGCT...AAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GAAGGGATCAGAGCAGGTAAAGCCGGAGGACTTGTCATGAAAGTGGCGTGTCCAGAATCCAGCCGTCGCTaGTACTTCTGGCGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EGIRAGKAGGLVMKVACPESSRR*YFWRPP Trigger: AGGAGGCCGCCAGAAGTACAAGCGACGGCTGGATTC...TGGACACGCCACTTTCATGACAAGTCCTCCGGCTTTACCTGCTCTGATCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AAAAGTCGAGGCTGGTGGCTGTGGAGGTCTCCACTTGGATCGTGTCCGTCCGTCGGCATAGCATACAGCTaGTCCTGCTCAACCCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: KSRGWWLWRSPLGSCPSVGIAYS*SCSTPS Trigger: ACTAGGGGTTGAGCAGGACAAGCTGTATGCTATGCC...GACGGACGGACACGATCCAAGTGGAGACCTCCACAGCCACCAGCCTCGACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGACCCTCGGGGATATCGTaGGGAGGCATAGCATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESAHGQEARRPLLLGQLRPSGIS*GGIAYS Trigger: GCTGTATGCTATGCCTCCCAACGATATCCCCGAGGG...TCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGAGAGTGGTCAGGGCCTaGATATCTCCCTCGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CCPQESAHGQEARRPLLLRVVRA*ISPSGI Trigger: TATCCCCGAGGGAGATATCAAGGCCCTGACCACTCT...CAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GACACACACAGCATGAGCCTGGGACTGCCTTTTGGGTGGGTGAAAGGTGCATTCGCGAGGGCCAGGGCCTaGAGGATCATAAACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DTHSMSLGLPFGWVKGAFARARA*RIINSS Trigger: GGAAGAGTTTATGATCCTCAAGGCCCTGGCCCTCGC...GAATGCACCTTTCACCCACCCAAAAGGCAGTCCCAGGCTCATGCTGTGTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS TCA 90 bp | GGTAAAGGTCCAGCAGCCCTACCAGGCGAGAGTGTTCCTCATCCATaGTATAGTCCTCGGCGTATGCCAGCTTGTCATCGTATGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GKGPAALPGESVPHP*YSPRRMPACHRMGA Trigger: CGCTCCCATACGATGACAAGCTGGCATACGCCGAGGACTATATCATGGATGAGGAACACTCTCGCCTGGTAGGGCTGCTGGACCTTTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS GCA 90 bp | TGGGATGTGCTTGGCCCAGTTGATGAGGAACACAAGCTCCCGATCTaGCAATTCACAGAGAGTGGTCAGGGCCTTGATATCTCCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: WDVLGPVDEEHKLPI*QFTESGQGLDISLG Trigger: CCCGAGGGAGATATCAAGGCCCTGACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTGTTCCTCATCAACTGGGCCAAGCACATCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS-3UTR CAA 90 bp | AACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAACGAGGCACAGGCGCTaGGGGATGGCGTTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: NLRSLLQYLLYPSGILRQTRHRR*GMALSM Trigger: CATGCTTAACGCCATCCCCAAGCGCCTGTGCCTCGT...TTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGGGAGCCAGCTAGATGGAGGAGGAACAGAGCCTCGGGATAGGCCACAGTTCAGCATCCCCACTTaGAGGCATTTCATGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: SGGSQLDGGGTEPRDRPQFSIPT*RHFMNR Trigger: CCGATTCATGAAATGCCTCAAAGTGGGGATGCTGAA...CTGTGGCCTATCCCGAGGCTCTGTTCCTCCTCCATCTAGCTGGCTCCCTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS GCA 90 bp | TACCAGGCGAGAGTGTTCCTCATCCATGATATAGTCCTCGGCGTATaGCAGCTTGTCATCGTATGGGAGCGAGCGGTACACGATGCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YQARVFLIHDIVLGV*QLVIVWERAVHDAQ Trigger: TTGGGCATCGTGTACCGCTCGCTCCCATACGATGACAAGCTGGCATACGCCGAGGACTATATCATGGATGAGGAACACTCTCGCCTGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS-3UTR CAA 90 bp | ATCTGCTGTCCCCAGGAGTCTGCACATGGCCAGGAAGCAAGAAGACCCCTTCTTAGCATGTACTCGCATTaGATGGCGGAGTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ICCPQESAHGQEARRPLLSMYSH*MAESSM Trigger: CATGGAGGACTCCGCCATCAAATGCGAGTACATGCT...AAGAAGGGGTCTTCTTGCTTCCTGGCCATGTGCAGACTCCTGGGGACAGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATAGCATGTACTCGCATTaGATGGCGGAGTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHSMYSH*MAESSM Trigger: CATGGAGGACTCCGCCATCAAATGCGAGTACATGCT...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | CACATGGCCAGGAAGCAAGAAGACCCCTTCTTCTGGGACAGCTCAGAGCCCCGATTCAGCATCCCCACTTaGAGGCATTTCATGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: HMARKQEDPFFWDSSEPRFSIPT*RHFMNR Trigger: CCGATTCATGAAATGCCTCAAAGTGGGGATGCTGAA...TCGGGGCTCTGAGCTGTCCCAGAAGAAGGGGTCTTCTTGCTTCCTGGCCATGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | TGCATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTGAATCCAGCCGTCGCTaGTACTTCTGGCGGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: CINQAGLKLRDPPASQPVESSRR*YFWRPP Trigger: AGGAGGCCGCCAGAAGTACAAGCGACGGCTGGATTC...AACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGAAGAGTGGTCAGGGCCTaGATATCTCCCTCGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRRVVRA*ISPSGI Trigger: TATCCCCGAGGGAGATATCAAGGCCCTGACCACTCT...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGAAAGCCTGGGATGTGCTaGGCCCAGTTGATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRKPGMC*AQLMRN Trigger: GTTCCTCATCAACTGGGCCAAGCACATCCCAGGCTT...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS TCA 90 bp | CTGGAGCTTCTGCACCGCCTCCAGGTTCTCAATGTACATCGAATCTaGGTTGGCGAGGGCCAGGGCCTTGAGGATCATAAACTCTTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LELLHRLQVLNVHRI*VGEGQGLEDHKLFL Trigger: AAGGAAGAGTTTATGATCCTCAAGGCCCTGGCCCTCGCCAACTCAGATTCGATGTACATTGAGAACCTGGAGGCGGTGCAGAAGCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS-3UTR CAA 90 bp | ACCGCTGGGTCTCTCTGCTATCCTACACCCCAACCTAAGCTACTGACCTTGAGAATGTGCTTGGCCCAGTaGATGAGGAACACAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TAGSLCYPTPQPKLLTLRMCLAQ*MRNTSS Trigger: GGAGCTTGTGTTCCTCATCAACTGGGCCAAGCACAT...TCTCAAGGTCAGTAGCTTAGGTTGGGGTGTAGGATAGCAGAGAGACCCAGCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | AACGAGAGAAAGAGATCCCAGCCAGCACCTCCTTCTACAAGGTACAAGGTTAGCGCGAGGGCCAGGGCCTaGAGGATCATAAACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NERKRSQPAPPSTRYKVSARARA*RIINSS Trigger: GGAAGAGTTTATGATCCTCAAGGCCCTGGCCCTCGC...GCTAACCTTGTACCTTGTAGAAGGAGGTGCTGGCTGGGATCTCTTTCTCTCGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTTGAGGTTTCCACCCTTACCTGAGTaGGCGAGGGCCAGGGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EVMEPQKHRLAGRPALRFPPLPE*ARARAL Trigger: CAAGGCCCTGGCCCTCGCCAACTCAGGTAAGGGTGG...AAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS CCA 90 bp | CTCATCCATGATATAGTCCTCGGCGTATGCCAGCTTGTCATCGTATaGGAGCGAGCGGTACACGATGCCCAAGATGAGAATCTCCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: LIHDIVLGVCQLVIV*ERAVHDAQDENLHP Trigger: TGGATGGAGATTCTCATCTTGGGCATCGTGTACCGCTCGCTCCCATACGATGACAAGCTGGCATACGCCGAGGACTATATCATGGATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS-3UTR CAA 90 bp | TGTGTCCGCTCAGGCAGCTGTGGGTGTTTGTCCAACCCTTGCTGGTGTGTTCATTTCAGCATCCCCACTTaGAGGCATTTCATGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: CVRSGSCGCLSNPCWCVHFSIPT*RHFMNR Trigger: CCGATTCATGAAATGCCTCAAAGTGGGGATGCTGAA...ATGAACACACCAGCAAGGGTTGGACAAACACCCACAGCTGCCTGAGCGGACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS-3UTR CAA 90 bp | CCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAAAGGCATAGCATACAGCTaGTCCTGCTCAACCCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PSLPAPVPPLSLRNPKTKGIAYS*SCSTPS Trigger: ACTAGGGGTTGAGCAGGACAAGCTGTATGCTATGCC...TTTTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | TGCATAAACCAGGCTGGCTTAAAACTCAGAGATCCTCCTGCCTCTCAGCCTGTTAGAGTGGTCAGGGCCTaGATATCTCCCTCGGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: CINQAGLKLRDPPASQPVRVVRA*ISPSGI Trigger: TATCCCCGAGGGAGATATCAAGGCCCTGACCACTCT...AACAGGCTGAGAGGCAGGAGGATCTCTGAGTTTTAAGCCAGCCTGGTTTATGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | AACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAAATGTGCTTGGCCCAGTaGATGAGGAACACAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLRSLLQYLLYPSGILRQMCLAQ*MRNTSS Trigger: GGAGCTTGTGTTCCTCATCAACTGGGCCAAGCACAT...TTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | ATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAACTTACCCAAGCCTGGGATGTGCTaGGCCCAGTTGATGAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ILLPLSLFNARIKGLNLPKPGMC*AQLMRN Trigger: GTTCCTCATCAACTGGGCCAAGCACATCCCAGGCTT...GGGTAAGTTCAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | AACTCAGAGATCCTCCTGCCTCTCAGCCTGTTTAATGCTAGGATTAAAGGCCTGAGCATGTACTCGCATTaGATGGCGGAGTCCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: NSEILLPLSLFNARIKGLSMYSH*MAESSM Trigger: CATGGAGGACTCCGCCATCAAATGCGAGTACATGCT...CAGGCCTTTAATCCTAGCATTAAACAGGCTGAGAGGCAGGAGGATCTCTGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | AACCTTCGCTCCCTGCTCCAGTACCTCCTCTATCCCTCAGGAATCCTAAGACAATTCAGCATCCCCACTTaGAGGCATTTCATGAATCGG | + |
|
Preference number: 5 (lower is better) Translates to: NLRSLLQYLLYPSGILRQFSIPT*RHFMNR Trigger: CCGATTCATGAAATGCCTCAAAGTGGGGATGCTGAA...TTGTCTTAGGATTCCTGAGGGATAGAGGAGGTACTGGAGCAGGGAGCGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTTATGGAACCTCAGAAGCATAGACTTGCTGGAAGACCAGCTTTGAGGTTTGCGAGGGCCAGGGCCTaGAGGATCATAAACTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EVMEPQKHRLAGRPALRFARARA*RIINSS Trigger: GGAAGAGTTTATGATCCTCAAGGCCCTGGCCCTCGC...AAACCTCAAAGCTGGTCTTCCAGCAAGTCTATGCTTCTGAGGTTCCATAACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110203.8 |
||
| CDS-3UTR CAA 90 bp | CCAAATGAGAGCCTCGTATTTCTCAAGCTCTGTCCATGGGAAGTCATCTGTTCAGGCATAGCATACAGCTaGTCCTGCTCAACCCCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: PNESLVFLKLCPWEVICSGIAYS*SCSTPS Trigger: ACTAGGGGTTGAGCAGGACAAGCTGTATGCTATGCC...TGAACAGATGACTTCCCATGGACAGAGCTTGAGAAATACGAGGCTCTCATTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110204.9 ENSMUST00000116402.10 |
||
| CDS GCA 72 bp | GCTCTTGCGGCACGGGTTGCCTCCCAGCCCCGCACCTaGGAACATAGGCGGCGAGTCCAGACCGTTGGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALAARVASQPRT*EHRRRVQTVGV Trigger: CACGCCAACGGTCTGGACTCGCCGCCTATGTTCGCAGGTGCGGGGCTGGGAGGCAACCCGTGCCGCAAGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS CAA 90 bp | CCTCCCAGCCCCGCACCTGCGAACATAGGCGGCGAGTCCAGACCGTaGGCGTGGGTGCTCAGGGCAATGCCAAAGCCACCACTGGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PPSPAPANIGGESRP*AWVLRAMPKPPLAS Trigger: GGACGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGACTCGCCGCCTATGTTCGCAGGTGCGGGGCTGGGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS CCA 72 bp | CCTGCGAACATAGGCGGCGAGTCCAGACCGTTGGCGTaGGTGCTCAGGGCAATGCCAAAGCCACCACTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PANIGGESRPLA*VLRAMPKPPLA Trigger: CGCCAGTGGTGGCTTTGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGACTCGCCGCCTATGTTCGCAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS CAA 72 bp | CCCGCACCTGCGAACATAGGCGGCGAGTCCAGACCGTaGGCGTGGGTGCTCAGGGCAATGCCAAAGCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: PAPANIGGESRP*AWVLRAMPKPP Trigger: TGGTGGCTTTGGCATTGCCCTGAGCACCCACGCCAACGGTCTGGACTCGCCGCCTATGTTCGCAGGTGCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
||
| CDS CAA 90 bp | TGGCTGAGGGCATCAATGCCCGAGGACGGGCTGGATGGCTCCGTCTaGATGAAGGAGCCGCAACTAGAGCCCAGGTGCCTGTCTTCGGAC | + |
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Preference number: 6 (lower is better) Translates to: WLRASMPEDGLDGSV*MKEPQLEPRCLSSD Trigger: GTCCGAAGACAGGCACCTGGGCTCTAGTTGCGGCTCCTTCATCAAGACGGAGCCATCCAGCCCGTCCTCGGGCATTGATGCCCTCAGCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CAA 72 bp | GCATCAATGCCCGAGGACGGGCTGGATGGCTCCGTCTaGATGAAGGAGCCGCAACTAGAGCCCAGGTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: ASMPEDGLDGSV*MKEPQLEPRCL Trigger: CAGGCACCTGGGCTCTAGTTGCGGCTCCTTCATCAAGACGGAGCCATCCAGCCCGTCCTCGGGCATTGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CCA 72 bp | CCTGCAGTTTCACACTGTAGAAGTGTTGCACGGCTTTaGCGGCTGTCTGCCTCAGCAGGGGCAGCGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: PAVSHCRSVARL*RLSASAGAASA Trigger: TGCTGACGCTGCCCCTGCTGAGGCAGACAGCCGCCAAAGCCGTGCAACACTTCTACAGTGTGAAACTGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS GCA 72 bp | TCCTGCAGCGCCTCGTGCAGCAGGTCCTGGAGCTTCTaGACCGCCTCCAGGTTCTCAATGTACATCGAATCT | + |
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Preference number: 6 (lower is better) Translates to: SCSASCSRSWSF*TASRFSMYIES Trigger: AGATTCGATGTACATTGAGAACCTGGAGGCGGTGCAGAAGCTCCAGGACCTGCTGCACGAGGCGCTGCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS GCA 72 bp | TCCGTCTTGATGAAGGAGCCGCAACTAGAGCCCAGGTaGCTGTCTTCGGACGACATTCGGTTCAGCAGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SVLMKEPQLEPR*LSSDDIRFSSW Trigger: CCAGCTGCTGAACCGAATGTCGTCCGAAGACAGGCACCTGGGCTCTAGTTGCGGCTCCTTCATCAAGACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110203.8 ENSMUST00000110204.9 |
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| CDS CAA 72 bp | CCAGAGGCAATGTCCCCGCACACGAGGCACAGGCGCTaGGGGATGGCGTTAAGCATGTACTCGCATTTGATG | + |
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Preference number: 6 (lower is better) Translates to: PEAMSPHTRHRR*GMALSMYSHLM Trigger: CATCAAATGCGAGTACATGCTTAACGCCATCCCCAAGCGCCTGTGCCTCGTGTGCGGGGACATTGCCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CCA 72 bp | GCTCATCTGGTCCCCAAGTGTCAGACTGGGGAAGCCTaGGATGTGCTTGGCCCAGTTGATGAGGAACACAAG | + |
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Preference number: 6 (lower is better) Translates to: AHLVPKCQTGEA*DVLGPVDEEHK Trigger: CTTGTGTTCCTCATCAACTGGGCCAAGCACATCCCAGGCTTCCCCAGTCTGACACTTGGGGACCAGATGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS TCA 72 bp | CCAGCAGCCCTACCAGGCGAGAGTGTTCCTCATCCATaGTATAGTCCTCGGCGTATGCCAGCTTGTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: PAALPGESVPHP*YSPRRMPACHR Trigger: ACGATGACAAGCTGGCATACGCCGAGGACTATATCATGGATGAGGAACACTCTCGCCTGGTAGGGCTGCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS TCA 72 bp | GGCAGTTGTACTCGATGTTGCCTTGAATGGTTCTCTTaGAGAACGCCTTGCAAGCCTCGCAGGAGGCCACTC | + |
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Preference number: 6 (lower is better) Translates to: GSCTRCCLEWFS*RTPCKPRRRPL Trigger: GAGTGGCCTCCTGCGAGGCTTGCAAGGCGTTCTTCAAGAGAACCATTCAAGGCAACATCGAGTACAACTGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CAA 72 bp | TCCCGATCTGCCAATTCACAGAGAGTGGTCAGGGCCTaGATATCTCCCTCGGGGATATCGTTGGGAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: SRSANSQRVVRA*ISPSGISLGGI Trigger: TATGCCTCCCAACGATATCCCCGAGGGAGATATCAAGGCCCTGACCACTCTCTGTGAATTGGCAGATCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CAA 90 bp | AACACAAGCTCCCGATCTGCCAATTCACAGAGAGTGGTCAGGGCCTaGATATCTCCCTCGGGGATATCGTTGGGAGGCATAGCATACAGC | + |
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Preference number: 6 (lower is better) Translates to: NTSSRSANSQRVVRA*ISPSGISLGGIAYS Trigger: GCTGTATGCTATGCCTCCCAACGATATCCCCGAGGGAGATATCAAGGCCCTGACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS GCA 72 bp | CTTGGCCCAGTTGATGAGGAACACAAGCTCCCGATCTaGCAATTCACAGAGAGTGGTCAGGGCCTTGATATC | + |
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Preference number: 6 (lower is better) Translates to: LGPVDEEHKLPI*QFTESGQGLDI Trigger: GATATCAAGGCCCTGACCACTCTCTGTGAATTGGCAGATCGGGAGCTTGTGTTCCTCATCAACTGGGCCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS GCA 72 bp | AGAGTGTTCCTCATCCATGATATAGTCCTCGGCGTATaGCAGCTTGTCATCGTATGGGAGCGAGCGGTACAC | + |
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Preference number: 6 (lower is better) Translates to: RVFLIHDIVLGV*QLVIVWERAVH Trigger: GTGTACCGCTCGCTCCCATACGATGACAAGCTGGCATACGCCGAGGACTATATCATGGATGAGGAACACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CCA 72 bp | GATATAGTCCTCGGCGTATGCCAGCTTGTCATCGTATaGGAGCGAGCGGTACACGATGCCCAAGATGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: DIVLGVCQLVIV*ERAVHDAQDEN Trigger: ATTCTCATCTTGGGCATCGTGTACCGCTCGCTCCCATACGATGACAAGCTGGCATACGCCGAGGACTATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CAA 72 bp | AGGCGCTTGGGGATGGCGTTAAGCATGTACTCGCATTaGATGGCGGAGTCCTCCATGATACCACTAGTACAG | + |
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Preference number: 6 (lower is better) Translates to: RRLGMALSMYSH*MAESSMIPLVQ Trigger: CTGTACTAGTGGTATCATGGAGGACTCCGCCATCAAATGCGAGTACATGCTTAACGCCATCCCCAAGCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021680.12 ENSMUST00000110203.8 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CAA 72 bp | ACCGCCTCCAGGTTCTCAATGTACATCGAATCTGAGTaGGCGAGGGCCAGGGCCTTGAGGATCATAAACTCT | + |
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Preference number: 6 (lower is better) Translates to: TASRFSMYIESE*ARARALRIINS Trigger: AGAGTTTATGATCCTCAAGGCCCTGGCCCTCGCCAACTCAGATTCGATGTACATTGAGAACCTGGAGGCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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| CDS CAA 90 bp | AGCTTCTGCACCGCCTCCAGGTTCTCAATGTACATCGAATCTGAGTaGGCGAGGGCCAGGGCCTTGAGGATCATAAACTCTTCCTTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SFCTASRFSMYIESE*ARARALRIINSSFS Trigger: AGAGAAGGAAGAGTTTATGATCCTCAAGGCCCTGGCCCTCGCCAACTCAGATTCGATGTACATTGAGAACCTGGAGGCGGTGCAGAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021680.12 ENSMUST00000110204.9 ENSMUST00000116402.10 ENSMUST00000167891.2 |
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