Pregenerated sensors for ESRP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040728Ensembl transcript IDs: ENSMUST00000043781.14, ENSMUST00000108310.8, ENSMUST00000108311.9, ENSMUST00000108313.8, ENSMUST00000147342.8, ENSMUST00000155519.2
Found 421 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTAACAAGGTGTGTGTGTGGAAGGGGAACCCTCAGGTGCATGTATaGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCAGGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: FNKVCVWKGNPQVHV*REHKGARGLQPRAQ Trigger: TTGAGCCCTGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCCACACACACACCTTGTTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR GCA 90 bp | TCAAATCCTTTAACAAGGTGTGTGTGTGGAAGGGGAACCCTCAGGTaGATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCA | + |
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Preference number: 1 (lower is better) Translates to: SNPLTRCVCGRGTLR*MYGENTRGPEVYNP Trigger: TGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR GCA 90 bp | AGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAAGATTGGGAATaGACAGTGAGGCTTCCGGAGCAACTAATGGCGGATGGTAGACGC | + |
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Preference number: 1 (lower is better) Translates to: RRLYFTENRETEDWE*TVRLPEQLMADGRR Trigger: GCGTCTACCATCCGCCATTAGTTGCTCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR CCA 90 bp | TACCTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGTGTGTGTGTaGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGG | + |
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Preference number: 1 (lower is better) Translates to: YLQRKTLKSFNKVCV*KGNPQVHVWREHKG Trigger: CCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR CCA 90 bp | CTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAAGATTaGGAATGCACAGTGAGGCTTCCGGAGCAACTAATGGCGGATGGT | + |
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Preference number: 1 (lower is better) Translates to: LARRLYFTENRETED*ECTVRLPEQLMADG Trigger: ACCATCCGCCATTAGTTGCTCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR CCA 90 bp | GTAAGCATCTCTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTaGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAG | + |
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Preference number: 1 (lower is better) Translates to: VSISGISVLQSFEQE*LKASSRNFSLGYFK Trigger: CTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAGAGATGCTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| 3UTR TCA 90 bp | AAACAGATGCTGGTGTCAAAGACTTCGCAAGGCCACAGGAGGTTATaGCTCCTTCCAGTAAGTAGGAAACTAGTTATAAAAGAGAACAAA | + |
|
Preference number: 1 (lower is better) Translates to: KQMLVSKTSQGHRRL*LLPVSRKLVIKENK Trigger: TTTGTTCTCTTTTATAACTAGTTTCCTACTTACTGGAAGGAGTCATAACCTCCTGTGGCCTTGCGAAGTCTTTGACACCAGCATCTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR CAA 90 bp | GCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTAAGGCTTaGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: AQPGARSMRVACCKA*LGSLLTPAKGKAQD Trigger: GTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR GCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCGTGTTGGCCGAGAATaGCGCAGCCTGACTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: VRLCWVHFSLQQKARPRTRVGRE*RSLTVD Trigger: GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR GCA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAACGTGTTGGCCGAGAATaGCGCAGCCTGACTGTAGAC | + |
|
Preference number: 2 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQRVGRE*RSLTVD Trigger: GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACG...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTCGTGTTGGCCGAGAATaGCGCAGCCTGACTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: EIPDCAQPGARSMRVACCRVGRE*RSLTVD Trigger: GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACG...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR CAA 90 bp | TCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTaGCTTGTTGTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SKFLIVLSQEPGPCV*LVVRLCWVHFSLQQ Trigger: TTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGTGTGTGTGTGGAAGGGGAACCGTGTTGGCCGAGAATaGCGCAGCCTGACTGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: LQRKTLKSFNKVCVWKGNRVGRE*RSLTVD Trigger: GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACG...GTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTAAACAAGGTGTGTGTGTaGAAGGGGAACCCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: NMCFGSNHFPAEFHQAAVNKVCV*KGNPQV Trigger: CACCTGAGGGTTCCCCTTCCACACACACACCTTGTT...TACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | CCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCAGACCATGATGGCCTATTaGAGAAAACTAATATTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSGACMERTQGGQRSTTQTMMAY*RKLIFR Trigger: CCTGAATATTAGTTTTCTTCAATAGGCCATCATGGT...CTGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTCCACAACCTAGGCATTaGATCCAAGCAAAGGACGAG | + |
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Preference number: 2 (lower is better) Translates to: SVLQSFEQEWLKASSRNFPQPRH*IQAKDE Trigger: CTCGTCCTTTGCTTGGATGCAATGCCTAGGTTGTGG...AAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGTGTGTGTGTGGAAGGGGAACCAGGCCCAGCCTGCCTaGAGGGTCTTAAAAATATTT | + |
|
Preference number: 2 (lower is better) Translates to: LQRKTLKSFNKVCVWKGNQAQPA*RVLKIF Trigger: AAATATTTTTAAGACCCTTCAGGCAGGCTGGGCCTG...GTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCAGTGTTGTCCTTTGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACATCCCATTTGGTTCCAATCTaGTGGACAGATTTCTGTGAT | + |
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Preference number: 2 (lower is better) Translates to: SQCCPLALSISSSPPATSHLVPI*WTDFCD Trigger: ATCACAGAAATCTGTCCATCAGATTGGAACCAAATG...GGATGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTCTGCTACAGAGGCTGTaGTCCAGGCCCTCGGTCTAC | + |
|
Preference number: 2 (lower is better) Translates to: RNNSPVMLNSGEFYFILFLLQRL*SRPSVY Trigger: GTAGACCGAGGGCCTGGAGCACAGCCTCTGTAGCAG...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR CCA 90 bp | CCCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCAACAAGGTGTGTGTGTaGAAGGGGAACCCTCAGGTG | + |
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Preference number: 2 (lower is better) Translates to: PYFLLIYRWYLQRKTLKSNKVCV*KGNPQV Trigger: CACCTGAGGGTTCCCCTTCCACACACACACCTTGTT...GGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR CCA 90 bp | CATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACCCTTCTTATTTACAGGTaGTACCTGCAGAGAAAAACC | + |
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Preference number: 2 (lower is better) Translates to: HVLWIKSLSRRVPSGSCTLLIYR*YLQRKT Trigger: GGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAG...GGTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTCAGGCCCAGCCTGCCTaGAGGGTCTTAAAAATATTT | + |
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Preference number: 2 (lower is better) Translates to: ASSRSGLRHQVGTFLLVIQAQPA*RVLKIF Trigger: AAATATTTTTAAGACCCTTCAGGCAGGCTGGGCCTG...AATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTAGGGAGACAGAAGATTaGGAATGCACAGTGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: ASSRSGLRHQVGTFLLVIRETED*ECTVRL Trigger: AAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCT...AATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| 3UTR CAA 90 bp | GAAATATATCCTCCTACAGGAAATGAAATGAGCCAGTGTTGTCCTTaGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACATCCCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: EIYPPTGNEMSQCCP*ALSISSSPPATSLR Trigger: TCTAAGGGATGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCTCATTTCATTTCCTGTAGGAGGATATATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTCACGTTAGCTGGAAGTaGGACCTTTTGACTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LQSFEQEWLKASSRNFSLHVSWK*DLLTSN Trigger: ATTTGAAGTCAAAAGGTCTCACTTCCAGCTAACGTG...AAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| 3UTR-3UTR GCA 90 bp | ACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAGACACTTCATGACATATaGAAAGAATTCCGTCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TSSRQVRAWPSSKKHFLQTLHDI*KEFRQP Trigger: AGGCTGACGGAATTCTTTGCATATGTCATGAAGTGT...CTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTAACTATAAGGCACCATaGTGGCCTATTGAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: LQSFEQEWLKASSRNFSLNYKAP*WPIEEN Trigger: GTTTTCTTCAATAGGCCATCATGGTGCCTTATAGTT...AAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGACAAACACTTCTTCTCTaGGGACGCTCTAACTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HIKLPSKKALFYREQGDRQTLLL*GRSNCW Trigger: CCAGCAGTTAGAGCGTCCTCAGAGAAGAAGTGTTTG...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 |
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| 3UTR-3UTR TCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTGGCCACAGGAGGTTATaGCTCCTTCCAGTAAGTAGG | + |
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Preference number: 2 (lower is better) Translates to: RNNSPVMLNSGEFYFILFGHRRL*LLPVSR Trigger: CCTACTTACTGGAAGGAGTCATAACCTCCTGTGGCC...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR GCA 90 bp | AATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACATGGCTACAGGCCCAGCCTaGCTGAAGGGTCTTAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: NTYEANIQLQLTLGTSYMATGPA*LKGLKN Trigger: ATTTTTAAGACCCTTCAGGCAGGCTGGGCCTGTAGC...CATGTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTAACTATAAGGCACCATaGTGGCCTATTGAAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: PTFFLFTGGTCREKPSNPNYKAP*WPIEEN Trigger: GTTTTCTTCAATAGGCCATCATGGTGCCTTATAGTT...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCAGGGAGACAGAAGATTaGGAATGCACAGTGAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LSLVWDLRILRMHIKLPSRETED*ECTVRL Trigger: AAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCT...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR TCA 90 bp | AATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACATGGGAAGTGAGACCTTTTaGCTTCAAATTCACATCGAA | + |
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Preference number: 2 (lower is better) Translates to: NTYEANIQLQLTLGTSYMGSETF*LQIHIE Trigger: TTCGATGTGAATTTGAAGTCAAAAGGTCTCACTTCC...CATGTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCAGGAAGTGAGACCTTTTaGCTTCAAATTCACATCGAA | + |
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Preference number: 2 (lower is better) Translates to: KASSRNFSLGYFKCQISPGSETF*LQIHIE Trigger: TTCGATGTGAATTTGAAGTCAAAAGGTCTCACTTCC...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR TCA 90 bp | AATAATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACCACGTTAGCTGGAAGTaGGACCTTTTGACTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: NNTYEANIQLQLTLGTSYHVSWK*DLLTSN Trigger: ATTTGAAGTCAAAAGGTCTCACTTCCAGCTAACGTG...GTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTCAAGACAACACAAAATCCTAGTCAACTGTCCAGCACCTAATAGGACTGAACAGGAAAAGGCTATTTaGACTCATAATACATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: CSRQHKILVNCPAPNRTEQEKAI*THNTFG Trigger: ACCAAATGTATTATGAGTGCAAATAGCCTTTTCCTG...TTCAGTCCTATTAGGTGCTGGACAGTTGACTAGGATTTTGTGTTGTCTTGAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCACGTTAGCTGGAAGTaGGACCTTTTGACTTCAAAT | + |
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Preference number: 2 (lower is better) Translates to: LSLVWDLRILRMHIKLPSHVSWK*DLLTSN Trigger: ATTTGAAGTCAAAAGGTCTCACTTCCAGCTAACGTG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCAACTTAGGAAATAAATaGTGCCACGTTAGCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LSLVWDLRILRMHIKLPSNLGNK*CHVSWK Trigger: CTTCCAGCTAACGTGGCATCATTTATTTCCTAAGTT...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR GCA 72 bp | TGTTCCTGGACGCAGCTGAGATTAAGATCCACACACTaGTACAGAGGCTGTGCTCCAGGCCCTCGGTCTACT | + |
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Preference number: 3 (lower is better) Translates to: CSWTQLRLRSTH*YRGCAPGPRST Trigger: AGTAGACCGAGGGCCTGGAGCACAGCCTCTGTAGCAGTGTGTGGATCTTAATCTCAGCTGCGTCCAGGAACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| 3UTR-3UTR CAA 90 bp | GGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCGCTTGTTGTAAGGCTTaGCTGGGTTCACTTCTCACT | + |
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Preference number: 3 (lower is better) Translates to: GRGTLRCMYGENTRGPEVACCKA*LGSLLT Trigger: AGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGC...GACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| 3UTR CCA 72 bp | CCAGGTCCATGCGTGTTGCTTGTTGTAAGGCTTTGCTaGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: PGPCVLLVVRLC*VHFSLQQKARP Trigger: GGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGCAACACGCATGGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| 3UTR-3UTR CAA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTGCTTGTTGTAAGGCTTaGCTGGGTTCACTTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: EIPDCAQPGARSMRVACCACCKA*LGSLLT Trigger: AGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGC...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| 3UTR-3UTR CAA 90 bp | TCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGCTTGTTGTAAGGCTTaGCTGGGTTCACTTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SKFLIVLSQEPGPCVLLVACCKA*LGSLLT Trigger: AGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGC...AACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| 3UTR CCA 72 bp | CTTGGCCATCATCAAAGAAGCATTTCCTCCAGGTCATaGAGGTCAAATCAGAGGCAAATCTGTCTACCGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LGHHQRSISSRS*RSNQRQICLPV Trigger: CACCGGTAGACAGATTTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR-3UTR CAA 90 bp | AACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAAACTCCCCGGTGATGTaGAACAGTGGGGAATTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: NIFQAGKSLAIIKEAFPPNSPVM*NSGEFY Trigger: ATAGAATTCCCCACTGTTCAACATCACCGGGGAGTT...TGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR CCA 72 bp | TCTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTaGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SGISVLQSFEQE*LKASSRNFSLG Trigger: ACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| 3UTR CCA 72 bp | GATGGAAACCTAACATCTTCCAGGCAGGTAAGAGCTTaGCCATCATCAAAGAAGCATTTCCTCCAGGTCATG | + |
|
Preference number: 3 (lower is better) Translates to: DGNLTSSRQVRA*PSSKKHFLQVM Trigger: CATGACCTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTTAGGTTTCCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGACAGGGAGACAGAAGATaGGGAATGCACAGTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SGLRHQVGTFLLVISSARQGDRR*GMHSEA Trigger: AGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTG...TCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTGTAGCTGCTTCGTTTTaGGTTTCAAATTTTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SVLQSFEQEWLKASSRNFVAASF*VSNFGP Trigger: GGGGCCAAAATTTGAAACCAAAAACGAAGCAGCTAC...AAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| 3UTR TCA 72 bp | TGGTCTATGACTACTCTCACACTGAAACAGCAGGGCTaGACAGCTACACAGGAAAAGGCTATTTGCACTCAT | + |
|
Preference number: 3 (lower is better) Translates to: WSMTTLTLKQQG*TATQEKAICTH Trigger: ATGAGTGCAAATAGCCTTTTCCTGTGTAGCTGTTCAGCCCTGCTGTTTCAGTGTGAGAGTAGTCATAGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR CCA 72 bp | AGTGTTTTAGGACACAGTAAGCTCTTTGCTTACGTTTaGTCTATGACTACTCTCACACTGAAACAGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVLGHSKLFAYV*SMTTLTLKQQG Trigger: GCCCTGCTGTTTCAGTGTGAGAGTAGTCATAGACCAAACGTAAGCAAAGAGCTTACTGTGTCCTAAAACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCTTGTTGTAAGGCTTaGCTGGGTTCACTTCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SRSGLRHQVGTFLLVISSACCKA*LGSLLT Trigger: AGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGC...ACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| 3UTR-3UTR CAA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTGTAGCTGCTTCGTTTTaGGTTTCAAATTTTGGCCCC | + |
|
Preference number: 3 (lower is better) Translates to: DSTVKVMMQTKNSHNLGIVAASF*VSNFGP Trigger: GGGGCCAAAATTTGAAACCAAAAACGAAGCAGCTAC...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| 3UTR TCA 72 bp | CTGGTGTCAAAGACTTCGCAAGGCCACAGGAGGTTATaGCTCCTTCCAGTAAGTAGGAAACTAGTTATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVSKTSQGHRRL*LLPVSRKLVIK Trigger: TTTTATAACTAGTTTCCTACTTACTGGAAGGAGTCATAACCTCCTGTGGCCTTGCGAAGTCTTTGACACCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR TCA 72 bp | GGAACCTTTCTTCTCATGCATCCTAACACCTTCTCCTaGGATTGTTCAAGTAACTATTCAGAGACAGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GTFLLMHPNTFS*DCSSNYSETGL Trigger: CAAACCTGTCTCTGAATAGTTACTTGAACAATCTCAGGAGAAGGTGTTAGGATGCATGAGAAGAAAGGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR TCA 72 bp | AGGCTATTTGCACTCATAATACATTTGGTTCCAATCTaGTGGACAGATTTCTGTGATAAAAGAAGCAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: RLFALIIHLVPI*WTDFCDKRSRV Trigger: AACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGATTGGAACCAAATGTATTATGAGTGCAAATAGCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR GCA 72 bp | AAAAATTTCCGTCTTGAAAACCAAGCCTCTCTGAGCTaGATACAGCTAGAATATCTTTGTAATACTTTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: KNFRLENQASLS*IQLEYLCNTLY Trigger: ATACAAAGTATTACAAAGATATTCTAGCTGTATGCAGCTCAGAGAGGCTTGGTTTTCAAGACGGAAATTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGCTTCAGCCGTGGCCGTaGAAGGGAGCCCCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVLQPWP*KGAPSC Trigger: GCATGAGGGGGCTCCCTTTCACGGCCACGGCTGAAG...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAACTTCAGCCGTGGCCGTaGAAGGGAGCCCCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSNRVGRECRSLTVDKLQPWP*KGAPSC Trigger: GCATGAGGGGGCTCCCTTTCACGGCCACGGCTGAAG...TTTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCAGAGTGGAGGGCTGCAGTaGCCGTGGGTTCAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSGACMERTQGGQRSTTQSGGLQ*PWVQEQ Trigger: CTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACT...CTGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCATCCGAACCCAGCTTaGCTCCGGTGGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLGSLLTPAKGKAQDYCHPNPA*LRWPQQ Trigger: CTGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATG...ACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAACATCCGAACCCAGCTTaGCTCCGGTGGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQHPNPA*LRWPQQ Trigger: CTGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATG...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGACCGTTCCTCCGGCCCTaGGCATTCAGGCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRPFLRP*AFRQSA Trigger: AGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGG...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTCTTCAGCCGTGGCCGTaGAAGGGAGCCCCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCLQPWP*KGAPSC Trigger: GCATGAGGGGGCTCCCTTTCACGGCCACGGCTGAAG...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACCTTCCTTCCCTCCAGTaGTGGGGCAGTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLLSNRVGRECRSLTVDLPSLQ*WGSAVQ Trigger: TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAG...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCGATAAAGGCATCTCCTaGCGGGCGTCCCTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: GRGTLRCMYGENTRGPEVDKGIS*RASLVI Trigger: AATCACCAGGGACGCCCGTCAGGAGATGCCTTTATC...GACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACCCAGTGATGGGGCAGTaGTGTCCAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PGLLSNRVGRECRSLTVDPVMGQ*CPKKAT Trigger: GGTGGCCTTCTTTGGACAGCACTGCCCCATCACTGG...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGGCCTGCCGGGTAGTATaGAGTGGAGGGCTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWACRVV*SGGLQC Trigger: GCACTGCAGCCCTCCACTGCATACTACCCGGCAGGC...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTGCCTGCCGGGTAGTATaGAGTGGAGGGCTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTACRVV*SGGLQC Trigger: GCACTGCAGCCCTCCACTGCATACTACCCGGCAGGC...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGGCCTGCCGGGTAGTATaGAGTGGAGGGCTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVACRVV*SGGLQC Trigger: GCACTGCAGCCCTCCACTGCATACTACCCGGCAGGC...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACAACTGTCGGAGGGCTTaGTCCAGCTGCGGCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYNCRRA*SSCGAE Trigger: TTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTT...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGGGGAGGAGACAGGCATaGCGGTGGGGACAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQKARPRTTVQSCWPGRRQA*RWGQAI Trigger: AATGGCTTGTCCCCACCGCCATGCCTGTCTCCTCCC...CGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGCACAGCCGTGGGAGCTaGGAATGTGTAGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQKARPRTTVQSCWPHSRGS*ECVGGR Trigger: CCTCCCTCCTACACATTCCCAGCTCCCACGGCTGTG...CGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAACCACGGTGCCAGGCTaGGGCGGGACACTGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQTTVPG*GGTLLR Trigger: TCTTAGCAGTGTCCCGCCCCAGCCTGGCACCGTGGT...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACACCACGGTGCCAGGCTaGGGCGGGACACTGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYTTVPG*GGTLLR Trigger: TCTTAGCAGTGTCCCGCCCCAGCCTGGCACCGTGGT...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR TCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVRWPQQ*SQKAPP Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGTTCCTCCGGCCCTaGGCATTCAGGCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWPFLRP*AFRQSA Trigger: AGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGG...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLYRVPM*CLCLCR Trigger: CCTGCAGAGGCACAAACATCACATGGGGACCCGGTA...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCACGGTTCAGCACCTGCTaGACTTCGGCAGCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGSLLTPAKGKAQDYCPRFSTC*TSAAVL Trigger: GAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCG...TGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCGGTTCAGCACCTGCTaGACTTCGGCAGCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTRFSTC*TSAAVL Trigger: GAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGCGGTTCAGCACCTGCTaGACTTCGGCAGCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVRFSTC*TSAAVL Trigger: GAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCG...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAAGTGGAGGGCTGCAGTaGCCGTGGGTTCAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLGSLLTPAKGKAQDYCPSGGLQ*PWVQEQ Trigger: CTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACT...TGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGCATCCGAACCCAGCTTaGCTCCGGTGGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVHPNPA*LRWPQQ Trigger: CTGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATG...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| CDS-3UTR CCA 90 bp | TCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTAACTGTCGGAGGGCTTaGTCCAGCTGCGGCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFLIVLSQEPGPCVLLVNCRRA*SSCGAE Trigger: TTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTT...AACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGTGTTGTCCTTTGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACATCCAACTGTCGGAGGGCTTaGTCCAGCTGCGGCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQCCPLALSISSSPPATSNCRRA*SSCGAE Trigger: TTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTT...GGATGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | GGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAAGGGAGGAGACAGGCATaGCGGTGGGGACAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: GLLSNRVGRECRSLTVDKGRRQA*RWGQAI Trigger: AATGGCTTGTCCCCACCGCCATGCCTGTCTCCTCCC...TTTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR CCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTCCGGGTAGTATGCAGTaGAGGGCTGCAGTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACPGSMQ*RAAVPV Trigger: CACGGGCACTGCAGCCCTCCACTGCATACTACCCGG...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTACCACGGTGCCAGGCTaGGGCGGGACACTGCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLTTVPG*GGTLLR Trigger: TCTTAGCAGTGTCCCGCCCCAGCCTGGCACCGTGGT...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACRWPQQ*SQKAPP Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTCCGTTCCTCCGGCCCTaGGCATTCAGGCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCPFLRP*AFRQSA Trigger: AGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGG...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACCTTCCTTCCCTCCAGTaGTGGGGCAGTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYLPSLQ*WGSAVQ Trigger: TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAG...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGCGGTTCAGCACCTGCTaGACTTCGGCAGCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLRFSTC*TSAAVL Trigger: GAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCG...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: PGLLSNRVGRECRSLTVDDVCSL*HSWEAQ Trigger: TTGTGCCTCCCACGAATGTCAGAGACTGCATACGTC...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAGTGATGGGGCAGTaGTGTCCAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ALLGSLLTPAKGKAQDYCPVMGQ*CPKKAT Trigger: GGTGGCCTTCTTTGGACAGCACTGCCCCATCACTGG...ACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR CCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAACATCCGAACCCAGCTTaGCTCCGGTGGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQHPNPA*LRWPQQ Trigger: CTGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATG...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCACTGGGCTACCTCATTaGATGTCCCTCCGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGTLRCMYGENTRGPEVTGLPH*MSLRQF Trigger: AAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGT...GACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| CDS-3UTR CCA 90 bp | CCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCAGAGACAGGCATGGCGGTaGGGACAAGCCATTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: PSGACMERTQGGQRSTTQRQAWR*GQAISI Trigger: AATCGAAATGGCTTGTCCCCACCGCCATGCCTGTCT...CTGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGGGAGGAGACAGGCATaGCGGTGGGGACAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLGRRQA*RWGQAI Trigger: AATGGCTTGTCCCCACCGCCATGCCTGTCTCCTCCC...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR CCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGCACAGCCGTGGGAGCTaGGAATGTGTAGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLHSRGS*ECVGGR Trigger: CCTCCCTCCTACACATTCCCAGCTCCCACGGCTGTG...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR CCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTCACAGCCGTGGGAGCTaGGAATGTGTAGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACHSRGS*ECVGGR Trigger: CCTCCCTCCTACACATTCCCAGCTCCCACGGCTGTG...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR TCA 90 bp | CTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTACGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LASQFFRASSRSGLRHQVRWPQQ*SQKAPP Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...TACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| CDS-3UTR TCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLYRVPM*CLCLCR Trigger: CCTGCAGAGGCACAAACATCACATGGGGACCCGGTA...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR TCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGACCCTCATGCGCACGATaGCTTGGTTTTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRPSCAR*LGFPWR Trigger: TCTCCAAGGAAAACCAAGTCATCGTGCGCATGAGGG...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR GCA 90 bp | AGCCAGTGTTGTCCTTTGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACATCCCCAGTGATGGGGCAGTaGTGTCCAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQCCPLALSISSSPPATSPVMGQ*CPKKAT Trigger: GGTGGCCTTCTTTGGACAGCACTGCCCCATCACTGG...GGATGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| CDS-3UTR CCA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACGGTTGGCCTACCATCTaGGTAGGTAACGAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLLSNRVGRECRSLTVDGWPTI*VGNEED Trigger: ATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR CCA 90 bp | AACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACCGGGTAGTATGCAGTaGAGGGCTGCAGTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: NMCFGSNHFPAEFHQAAVPGSMQ*RAAVPV Trigger: CACGGGCACTGCAGCCCTCCACTGCATACTACCCGG...TACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| CDS-3UTR CCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGACTATTAGGCGAACCTaGGGGGCTGGGATAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWTIRRT*GAGIVG Trigger: GCCTACTATCCCAGCCCCCCAGGTTCGCCTAATAGT...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 |
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| CDS-3UTR CCA 90 bp | GGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGTLRCMYGENTRGPEVYKPIL*VESWPG Trigger: ACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTA...GACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108311.9 |
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| CDS-3UTR TCA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVYRVPM*CLCLCR Trigger: CCTGCAGAGGCACAAACATCACATGGGGACCCGGTA...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR TCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCCCTCATGCGCACGATaGCTTGGTTTTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTPSCAR*LGFPWR Trigger: TCTCCAAGGAAAACCAAGTCATCGTGCGCATGAGGG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR TCA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGCTTCCTTCCCTCCAGTaGTGGGGCAGTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVLPSLQ*WGSAVQ Trigger: TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAG...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR TCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAACGGTTCAGCACCTGCTaGACTTCGGCAGCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQRFSTC*TSAAVL Trigger: GAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCG...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGGGAGGCACAAACTGCTaGGGTAGTACAGGGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLGGTNC*GSTGIM Trigger: CATTATCCCTGTACTACCTCAGCAGTTTGTGCCTCC...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR TCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVDVCSL*HSWEAQ Trigger: TTGTGCCTCCCACGAATGTCAGAGACTGCATACGTC...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTDVCSL*HSWEAQ Trigger: TTGTGCCTCCCACGAATGTCAGAGACTGCATACGTC...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGATAAAGGCATCTCCTaGCGGGCGTCCCTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLDKGIS*RASLVI Trigger: AATCACCAGGGACGCCCGTCAGGAGATGCCTTTATC...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTGATAAAGGCATCTCCTaGCGGGCGTCCCTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCDKGIS*RASLVI Trigger: AATCACCAGGGACGCCCGTCAGGAGATGCCTTTATC...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCAGGGCTTGGTCCAGCTaGGGCGCGGAAGACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FKFTSKFLIVLSQEPGPCRAWSS*GAEDRF Trigger: AAACCTGTCTTCCGCGCCGCAGCTGGACCAAGCCCT...GCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | ACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAGAGGGCTTGGTCCAGCTaGGGCGCGGAAGACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSRQVRAWPSSKKHFLQRAWSS*GAEDRF Trigger: AAACCTGTCTTCCGCGCCGCAGCTGGACCAAGCCCT...CTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTGCCTGCCGGGTAGTATaGAGTGGAGGGCTGCAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLQSFEQEWLKASSRNFACRVV*SGGLQC Trigger: GCACTGCAGCCCTCCACTGCATACTACCCGGCAGGC...AAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTGAAGAGCTGAGTGCCTaGCGGGTAGTATGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCEELSA*RVVCSG Trigger: TCCACTGCATACTACCCGGCAGGCACTCAGCTCTTC...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGAGTCCCACCTTCTTGTTaGCCAAATCCACGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRVPPSC*PNPRLS Trigger: GGAAAGTCGTGGATTTGGCCAACAAGAAGGTGGGAC...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGGATAATGGGAGGGGTTaGAAGTGGAATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVDNGRG*KWNQRG Trigger: GCCCCTCTGATTCCACTTCCAACCCCTCCCATTATC...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACGATAATGGGAGGGGTTaGAAGTGGAATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYDNGRG*KWNQRG Trigger: GCCCCTCTGATTCCACTTCCAACCCCTCCCATTATC...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| 3UTR CAA 72 bp | GGAGCCAGGTCCATGCGTGTTGCTTGTTGTAAGGCTTaGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GARSMRVACCKA*LGSLLTPAKGK Trigger: CTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTACAACAAGCAACACGCATGGACCTGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCAGTGCAATATCTTGATCTaGAGATTGCCAGGGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSGACMERTQGGQRSTTQCNILI*RLPGQT Trigger: GGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCA...CTGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAATACCGGGTCCCCATGTaGTGTTTGTGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQYRVPM*CLCLCR Trigger: CCTGCAGAGGCACAAACATCACATGGGGACCCGGTA...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | TCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SKFLIVLSQEPGPCVLLVDVCSL*HSWEAQ Trigger: TTGTGCCTCCCACGAATGTCAGAGACTGCATACGTC...AACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGATAAAGGCATCTCCTaGCGGGCGTCCCTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LASQFFRASSRSGLRHQVDKGIS*RASLVI Trigger: AATCACCAGGGACGCCCGTCAGGAGATGCCTTTATC...TACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGGATAAAGGCATCTCCTaGCGGGCGTCCCTGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVDKGIS*RASLVI Trigger: AATCACCAGGGACGCCCGTCAGGAGATGCCTTTATC...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACGAATGCTCTGTCTGTTaGCTTCATCTGGATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PGLLSNRVGRECRSLTVDECSVC*LHLDKG Trigger: GCCTTTATCCAGATGAAGTCAACAGACAGAGCATTC...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | ACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACGAAGAGCTGAGTGCCTaGCGGGTAGTATGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCALDQITFPPSSIRQLYEELSA*RVVCSG Trigger: TCCACTGCATACTACCCGGCAGGCACTCAGCTCTTC...GTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGGAAGAGCTGAGTGCCTaGCGGGTAGTATGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVEELSA*RVVCSG Trigger: TCCACTGCATACTACCCGGCAGGCACTCAGCTCTTC...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGGTCCCACCTTCTTGTTaGCCAAATCCACGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWVPPSC*PNPRLS Trigger: GGAAAGTCGTGGATTTGGCCAACAAGAAGGTGGGAC...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGATCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRSLLTD*LNCRRA Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGACTGGGCTACCTCATTaGATGTCCCTCCGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWTGLPH*MSLRQF Trigger: AAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGT...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGACTGGGCTACCTCATTaGATGTCCCTCCGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVTGLPH*MSLRQF Trigger: AAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGT...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGATCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRSLERN*ATSLDV Trigger: GACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTGATAATGGGAGGGGTTaGAAGTGGAATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCDNGRG*KWNQRG Trigger: GCCCCTCTGATTCCACTTCCAACCCCTCCCATTATC...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGATAATGGGAGGGGTTaGAAGTGGAATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLDNGRG*KWNQRG Trigger: GCCCCTCTGATTCCACTTCCAACCCCTCCCATTATC...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTAGACAGGCATGGCGGTaGGGACAAGCCATTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACRQAWR*GQAISI Trigger: AATCGAAATGGCTTGTCCCCACCGCCATGCCTGTCT...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYQFIAH*LVKLSE Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| CDS-3UTR TCA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGAACCTTGCAATATCTTaGTCTGAAGATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLNLAIS*SEDCQG Trigger: GCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTT...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCTCTGTCTGTTaGCTTCATCTGGATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRECSVC*LHLDKG Trigger: GCCTTTATCCAGATGAAGTCAACAGACAGAGCATTC...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCTAACTAGTACTTCGTaGAGCTGTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTLTSTS*SCPTFL Trigger: CAAGAAGGTGGGACAGCTGCACGAAGTACTAGTTAG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGCTAACTAGTACTTCGTaGAGCTGTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVLTSTS*SCPTFL Trigger: CAAGAAGGTGGGACAGCTGCACGAAGTACTAGTTAG...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTCCAGTGATGGGGCAGTaGTGTCCAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SVLQSFEQEWLKASSRNFPVMGQ*CPKKAT Trigger: GGTGGCCTTCTTTGGACAGCACTGCCCCATCACTGG...AAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
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| CDS-3UTR CCA 90 bp | TCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTCCCACCTTCTTGTTaGCCAAATCCACGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SKFLIVLSQEPGPCVLLVVPPSC*PNPRLS Trigger: GGAAAGTCGTGGATTTGGCCAACAAGAAGGTGGGAC...AACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGGTTGGCCTACCATCTaGGTAGGTAACGAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLGWPTI*VGNEED Trigger: ATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTAAAAGCATCTCCGGTTaGCCTACCATCTGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACKSISG*PTIWVG Trigger: ACCTACCCAGATGGTAGGCCAACCGGAGATGCTTTT...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTAAAAGCATCTCCGGTTaGCCTACCATCTGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCKSISG*PTIWVG Trigger: ACCTACCCAGATGGTAGGCCAACCGGAGATGCTTTT...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGAGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRVYEYL*KTPPGS Trigger: ACTTCCTGGGGGAGTTTTCCACAGATATTCGTACAC...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACGGTAGAGTCCTGGCCTaGTCATTTGTGTGTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYGRVLA*SFVCTS Trigger: ACTTGTACACACAAATGACCAGGCCAGGACTCTACC...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAGGTAGAGTCCTGGCCTaGTCATTTGTGTGTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQGRVLA*SFVCTS Trigger: ACTTGTACACACAAATGACCAGGCCAGGACTCTACC...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTGGTAGAGTCCTGGCCTaGTCATTTGTGTGTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTGRVLA*SFVCTS Trigger: ACTTGTACACACAAATGACCAGGCCAGGACTCTACC...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTLWVES*PGHLCV Trigger: TACACACAAATGACCAGGCCAGGACTCTACCCAAAG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLQFIAH*LVKLSE Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGTACTCTCTCTGGATCTaGAAATCTGTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQKARPRTTVQSCWPYSLWI*KSVIVG Trigger: CCCTACAATCACAGATTTTCAGATCCAGAGAGAGTA...CGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGAACCTTGCAATATCTTaGTCTGAAGATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWNLAIS*SEDCQG Trigger: GCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTT...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAAAACCTTGCAATATCTTaGTCTGAAGATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSNRVGRECRSLTVDKNLAIS*SEDCQG Trigger: GCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTT...TTTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTCCGTTCCTCCGGCCCTaGGCATTCAGGCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DSTVKVMMQTKNSHNLGIPFLRP*AFRQSA Trigger: AGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGG...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAAGACAACACAAAATCCTAGTCAACTGTCCAGCACCTAATAGGACTGAACCGTTCCTCCGGCCCTaGGCATTCAGGCAAAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CSRQHKILVNCPAPNRTEPFLRP*AFRQSA Trigger: AGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGG...TTCAGTCCTATTAGGTGCTGGACAGTTGACTAGGATTTTGTGTTGTCTTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR GCA 90 bp | AGCCAGTGTTGTCCTTTGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACATCCCTAACTAGTACTTCGTaGAGCTGTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQCCPLALSISSSPPATSLTSTS*SCPTFL Trigger: CAAGAAGGTGGGACAGCTGCACGAAGTACTAGTTAG...GGATGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGATTTTTATGGTACTTCTaGGCAGCCATGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRFLWYF*AAMNAL Trigger: CAGAGCATTCATGGCTGCGCAGAAGTACCATAAAAA...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGTLRCMYGENTRGPEVHFDLK*PPLTQS Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...GACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | CTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGAAGAGCTGAGTGCCTaGCGGGTAGTATGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQSFEQEWLKASSRNFSLEELSA*RVVCSG Trigger: TCCACTGCATACTACCCGGCAGGCACTCAGCTCTTC...AAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACSLERN*ATSLDV Trigger: GACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTTCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLSLERN*ATSLDV Trigger: GACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQECLLL*QHREDL Trigger: GAGGTCTTCCCTATGCTGCCACAATAGAAGACATTC...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAAGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLLSNRVGRECRSLTVDKECLLL*QHREDL Trigger: GAGGTCTTCCCTATGCTGCCACAATAGAAGACATTC...TTTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVVYEYL*KTPPGS Trigger: ACTTCCTGGGGGAGTTTTCCACAGATATTCGTACAC...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGACCGGGTAGTATGCAGTaGAGGGCTGCAGTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGLRHQVGTFLLVISSARPGSMQ*RAAVPV Trigger: CACGGGCACTGCAGCCCTCCACTGCATACTACCCGG...TCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| 3UTR CAA 72 bp | AGTATTAGTTCTTCTCCGCCTGCCACATCCCTTAGATaGTCCCTCACCCCTCATAGCCTAGCTCAGAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: SISSSPPATSLR*SLTPHSLAQNA Trigger: TGCATTCTGAGCTAGGCTATGAGGGGTGAGGGACAATCTAAGGGATGTGGCAGGCGGAGAAGAACTAATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVQFIAH*LVKLSE Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGTACTCTCTCTGGATCTaGAAATCTGTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWYSLWI*KSVIVG Trigger: CCCTACAATCACAGATTTTCAGATCCAGAGAGAGTA...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTACTCTCTCTGGATCTaGAAATCTGTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KALLGSLLTPAKGKAQDYYSLWI*KSVIVG Trigger: CCCTACAATCACAGATTTTCAGATCCAGAGAGAGTA...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGCAATATCTTGATCTaGAGATTGCCAGGGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IEIPDCAQPGARSMRVACCNILI*RLPGQT Trigger: GGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCA...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGAACCTTGCAATATCTTaGTCTGAAGATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLNLAIS*SEDCQG Trigger: GCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTT...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGTTGAATTTCAATTACCACACCAACAGTAGGCTAATTGCTGACATATATCTTCAGCCGTGGCCGTaGAAGGGAGCCCCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AELNFNYHTNSRLIADIYLQPWP*KGAPSC Trigger: GCATGAGGGGGCTCCCTTTCACGGCCACGGCTGAAG...ATATATGTCAGCAATTAGCCTACTGTTGGTGTGGTAATTGAAATTCAACTCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGTGTGTGTGTGGAAGGGGAACGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LQRKTLKSFNKVCVWKGNDVCSL*HSWEAQ Trigger: TTGTGCCTCCCACGAATGTCAGAGACTGCATACGTC...GTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGAATGCTCTGTCTGTTaGCTTCATCTGGATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLECSVC*LHLDKG Trigger: GCCTTTATCCAGATGAAGTCAACAGACAGAGCATTC...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | AGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGAAGGGCTTGGTCCAGCTaGGGCGCGGAAGACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SGLRHQVGTFLLVISSARRAWSS*GAEDRF Trigger: AAACCTGTCTTCCGCGCCGCAGCTGGACCAAGCCCT...TCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTAGGGCTTGGTCCAGCTaGGGCGCGGAAGACAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTFFLFTGGTCREKPSNPRAWSS*GAEDRF Trigger: AAACCTGTCTTCCGCGCCGCAGCTGGACCAAGCCCT...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTAGGGCTAGATCTCTGTaGTCCTCACTTACAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALLGSLLTPAKGKAQDYCRARSL*SSLTNL Trigger: TAGATTTGTAAGTGAGGAGCACAGAGATCTAGCCCT...ACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGAGGGCTAGATCTCTGTaGTCCTCACTTACAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: HFSLQQKARPRTTVQSCWRARSL*SSLTNL Trigger: TAGATTTGTAAGTGAGGAGCACAGAGATCTAGCCCT...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAAGGGCTAGATCTCTGTaGTCCTCACTTACAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQRARSL*SSLTNL Trigger: TAGATTTGTAAGTGAGGAGCACAGAGATCTAGCCCT...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTTTTTTATGGTACTTCTaGGCAGCCATGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ALLGSLLTPAKGKAQDYCFLWYF*AAMNAL Trigger: CAGAGCATTCATGGCTGCGCAGAAGTACCATAAAAA...ACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACAGTGGAGGGCTGCAGTaGCCGTGGGTTCAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLEVLLSDSFRITIRLSNSGGLQ*PWVQEQ Trigger: CTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACT...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTAACTGTCGGAGGGCTTaGTCCAGCTGCGGCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WLKASSRNFSLGYFKCQINCRRA*SSCGAE Trigger: TTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTT...AATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCACTGGGCTACCTCATTaGATGTCCCTCCGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: FKFTSKFLIVLSQEPGPCTGLPH*MSLRQF Trigger: AAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGT...GCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAGACTGGGCTACCTCATTaGATGTCCCTCCGGCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: TSSRQVRAWPSSKKHFLQTGLPH*MSLRQF Trigger: AAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGT...CTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTATGCGCACGATGACTTaGTTTTCCTTGGAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLMRTMT*FSLERN Trigger: GTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGGTTGGCCTACCATCTaGGTAGGTAACGAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKFTSKFLIVLSQEPGPCGWPTI*VGNEED Trigger: ATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC...GCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAAGGTTGGCCTACCATCTaGGTAGGTAACGAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQGWPTI*VGNEED Trigger: ATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | TTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGCCGGGTAGTATGCAGTaGAGGGCTGCAGTGCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFTGGTCREKPSNPLTRPGSMQ*RAAVPV Trigger: CACGGGCACTGCAGCCCTCCACTGCATACTACCCGG...CCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| 3UTR CAA 72 bp | CCTCCTACAGGAAATGAAATGAGCCAGTGTTGTCCTTaGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PPTGNEMSQCCP*ALSISSSPPAT Trigger: TGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCTCATTTCATTTCCTGTAGGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAACAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQQFIAH*LVKLSE Trigger: CTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTG...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | CTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTATGCAATATCTTGATCTaGAGATTGCCAGGGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LASQFFRASSRSGLRHQVCNILI*RLPGQT Trigger: GGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCA...TACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTCCCTCATGCGCACGATaGCTTGGTTTTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSGLRHQVGTFLLVIPSCAR*LGFPWR Trigger: TCTCCAAGGAAAACCAAGTCATCGTGCGCATGAGGG...AATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCTTCAGCCGTGGCCGTaGAAGGGAGCCCCCTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSLQPWP*KGAPSC Trigger: GCATGAGGGGGCTCCCTTTCACGGCCACGGCTGAAG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGACTTCCTTCCCTCCAGTaGTGGGGCAGTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SGLRHQVGTFLLVISSARLPSLQ*WGSAVQ Trigger: TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAG...TCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGACGGTTCAGCACCTGCTaGACTTCGGCAGCTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIKLPSKKALFYREQGDRRFSTC*TSAAVL Trigger: GAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCG...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | ACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACGAATGCTCTGTCTGTTaGCTTCATCTGGATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TCALDQITFPPSSIRQLYECSVC*LHLDKG Trigger: GCCTTTATCCAGATGAAGTCAACAGACAGAGCATTC...GTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTTTTTTATGGTACTTCTaGGCAGCCATGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCFLWYF*AAMNAL Trigger: CAGAGCATTCATGGCTGCGCAGAAGTACCATAAAAA...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTTTTTTATGGTACTTCTaGGCAGCCATGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLFLWYF*AAMNAL Trigger: CAGAGCATTCATGGCTGCGCAGAAGTACCATAAAAA...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSLQQKARPRTTVQSCWPHFDLK*PPLTQS Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...CGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCATCCGAACCCAGCTTaGCTCCGGTGGCCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSHPNPA*LRWPQQ Trigger: CTGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGATCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FYREQGDRRLGMHSEASGSLLTD*LNCRRA Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAATCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQSLLTD*LNCRRA Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTAAAAGCATCTCCGGTTaGCCTACCATCTGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSFEQEWLKASSRNFSLKSISG*PTIWVG Trigger: ACCTACCCAGATGGTAGGCCAACCGGAGATGCTTTT...AAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAAAAAGCATCTCCGGTTaGCCTACCATCTGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NIFQAGKSLAIIKEAFPPKSISG*PTIWVG Trigger: ACCTACCCAGATGGTAGGCCAACCGGAGATGCTTTT...TGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | TGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTGGGAGGAGACAGGCATaGCGGTGGGGACAAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: WLKASSRNFSLGYFKCQIGRRQA*RWGQAI Trigger: AATGGCTTGTCCCCACCGCCATGCCTGTCTCCTCCC...AATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCACACAGCCGTGGGAGCTaGGAATGTGTAGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KASSRNFSLGYFKCQISPHSRGS*ECVGGR Trigger: CCTCCCTCCTACACATTCCCAGCTCCCACGGCTGTG...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FKFTSKFLIVLSQEPGPCLWVES*PGHLCV Trigger: TACACACAAATGACCAGGCCAGGACTCTACCCAAAG...GCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AATAATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NNTYEANIQLQLTLGTSYRWPQQ*SQKAPP Trigger: TGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCG...GTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATTATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAAAACCTTGCAATATCTTaGTCTGAAGATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHHQRSISSRSWRSNQRQNLAIS*SEDCQG Trigger: GCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTT...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCATACCGGGTCCCCATGTaGTGTTTGTGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KASSRNFSLGYFKCQISPYRVPM*CLCLCR Trigger: CCTGCAGAGGCACAAACATCACATGGGGACCCGGTA...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGACTTCCTTCCCTCCAGTaGTGGGGCAGTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HIKLPSKKALFYREQGDRLPSLQ*WGSAVQ Trigger: TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAG...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGAGAATGCTCTGTCTGTTaGCTTCATCTGGATAAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYREQGDRRLGMHSEASGECSVC*LHLDKG Trigger: GCCTTTATCCAGATGAAGTCAACAGACAGAGCATTC...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGGAAATCTTCGCCTGTTaGTTTGTAAACCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVEIFAC*FVNLNV Trigger: TACATTGAGGTTTACAAAGCAACAGGCGAAGATTTC...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTGAAATCTTCGCCTGTTaGTTTGTAAACCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: VRLCWVHFSLQQKARPRTEIFAC*FVNLNV Trigger: TACATTGAGGTTTACAAAGCAACAGGCGAAGATTTC...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | AATAATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACAGTGGAGGGCTGCAGTaGCCGTGGGTTCAAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYEANIQLQLTLGTSYSGGLQ*PWVQEQ Trigger: CTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACT...GTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACGAAGAGCTGAGTGCCTaGCGGGTAGTATGCAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLEVLLSDSFRITIRLSNEELSA*RVVCSG Trigger: TCCACTGCATACTACCCGGCAGGCACTCAGCTCTTC...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTGTCCCACCTTCTTGTTaGCCAAATCCACGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSGLRHQVGTFLLVIVPPSC*PNPRLS Trigger: GGAAAGTCGTGGATTTGGCCAACAAGAAGGTGGGAC...AATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCAACTGTCGGAGGGCTTaGTCCAGCTGCGGCGCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSNCRRA*SSCGAE Trigger: TTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTT...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
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| CDS-3UTR CCA 90 bp | AGTCAAGATGGAAACCTAACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCATCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SQDGNLTSSRQVRAWPSSSLERN*ATSLDV Trigger: GACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...TGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTTAGGTTTCCATCTTGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGAATGCGCACGATGACTTaGTTTTCCTTGGAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: FYREQGDRRLGMHSEASGMRTMT*FSLERN Trigger: GTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | ACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAGATGCGCACGATGACTTaGTTTTCCTTGGAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TSSRQVRAWPSSKKHFLQMRTMT*FSLERN Trigger: GTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT...CTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | GCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTGGTTGGCCTACCATCTaGGTAGGTAACGAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSGLRHQVGTFLLVIGWPTI*VGNEED Trigger: ATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC...AATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTAGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NMCFGSNHFPAEFHQAAVVYEYL*KTPPGS Trigger: ACTTCCTGGGGGAGTTTTCCACAGATATTCGTACAC...TACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AATAATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACCACAGCCGTGGGAGCTaGGAATGTGTAGGAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NNTYEANIQLQLTLGTSYHSRGS*ECVGGR Trigger: CCTCCCTCCTACACATTCCCAGCTCCCACGGCTGTG...GTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGATACTCTCTCTGGATCTaGAAATCTGTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYREQGDRRLGMHSEASGYSLWI*KSVIVG Trigger: CCCTACAATCACAGATTTTCAGATCCAGAGAGAGTA...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AGTCAAGATGGAAACCTAACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCATGCAATATCTTGATCTaGAGATTGCCAGGGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SQDGNLTSSRQVRAWPSSCNILI*RLPGQT Trigger: GGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCA...TGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTTAGGTTTCCATCTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | AAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTTACCGGGTCCCCATGTaGTGTTTGTGCCTCTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KFSCLIVSGSPYVFQTLLYRVPM*CLCLCR Trigger: CCTGCAGAGGCACAAACATCACATGGGGACCCGGTA...AAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTCCCTCATGCGCACGATaGCTTGGTTTTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PTFFLFTGGTCREKPSNPPSCAR*LGFPWR Trigger: TCTCCAAGGAAAACCAAGTCATCGTGCGCATGAGGG...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTCTTCCTTCCCTCCAGTaGTGGGGCAGTGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RNNSPVMLNSGEFYFILFLPSLQ*WGSAVQ Trigger: TTGGACAGCACTGCCCCATCACTGGAGGGAAGGAAG...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTTAGGACACAGTAAGCTCTTTGCTTACGTTTGGTCTATGACTACTCTCGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: SVLGHSKLFAYVWSMTTLDVCSL*HSWEAQ Trigger: TTGTGCCTCCCACGAATGTCAGAGACTGCATACGTC...GAGAGTAGTCATAGACCAAACGTAAGCAAAGAGCTTACTGTGTCCTAAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR GCA 90 bp | CATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACCGAAATCTTCGCCTGTTaGTTTGTAAACCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: HVLWIKSLSRRVPSGSCTEIFAC*FVNLNV Trigger: TACATTGAGGTTTACAAAGCAACAGGCGAAGATTTC...GGTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | CATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HVLWIKSLSRRVPSGSCTHFDLK*PPLTQS Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...GGTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIPDCAQPGARSMRVACCHFDLK*PPLTQS Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGTGTGTGTGTGGAAGGGGAACATGCGCACGATGACTTaGTTTTCCTTGGAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQRKTLKSFNKVCVWKGNMRTMT*FSLERN Trigger: GTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT...GTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTATGCGCACGATGACTTaGTTTTCCTTGGAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSFEQEWLKASSRNFSLMRTMT*FSLERN Trigger: GTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT...AAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCAAAAGCATCTCCGGTTaGCCTACCATCTGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PYFLLIYRWYLQRKTLKSKSISG*PTIWVG Trigger: ACCTACCCAGATGGTAGGCCAACCGGAGATGCTTTT...GGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTGATAATGGGAGGGGTTaGAAGTGGAATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTFFLFTGGTCREKPSNPDNGRG*KWNQRG Trigger: GCCCCTCTGATTCCACTTCCAACCCCTCCCATTATC...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTTTTAGGACACAGTAAGCTCTTTGCTTACGTTTGGTCTATGACTACTCTCGATAATGGGAGGGGTTaGAAGTGGAATCAGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLGHSKLFAYVWSMTTLDNGRG*KWNQRG Trigger: GCCCCTCTGATTCCACTTCCAACCCCTCCCATTATC...GAGAGTAGTCATAGACCAAACGTAAGCAAAGAGCTTACTGTGTCCTAAAACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LQSFEQEWLKASSRNFSLVYEYL*KTPPGS Trigger: ACTTCCTGGGGGAGTTTTCCACAGATATTCGTACAC...AAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTAGACAGGCATGGCGGTaGGGACAAGCCATTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: SRSGLRHQVGTFLLVISSRQAWR*GQAISI Trigger: AATCGAAATGGCTTGTCCCCACCGCCATGCCTGTCT...ACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGACTATTAGGCGAACCTaGGGGGCTGGGATAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFTGGTCREKPSNPLTRTIRRT*GAGIVG Trigger: GCCTACTATCCCAGCCCCCCAGGTTCGCCTAATAGT...CCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 |
||
| CDS-3UTR CCA 90 bp | ACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAGGGCAATGTAAACCTTTaGGCTGTTATACTAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSRQVRAWPSSKKHFLQGNVNL*AVILEG Trigger: CCCTTCTAGTATAACAGCCCAAAGGTTTACATTGCC...CTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| 3UTR CAA 72 bp | CAAGCAAAGGACGAGAGTAACAAAGAAACATGTGCTTaGGATCAAATCACTTTCCCGCCGAGTTCCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAKDESNKETCA*DQITFPPSSIR Trigger: CCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGTTTCTTTGTTACTCTCGTCCTTTGCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| 3UTR CAA 72 bp | AGATGGAAACCTAACATCTTCCAGGCAGGTAAGAGCTaGGCCATCATCAAAGAAGCATTTCCTCCAGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWKPNIFQAGKS*AIIKEAFPPGH Trigger: ATGACCTGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTTAGGTTTCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | GCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCTGTCAGTTCCAACTaGTCCGGTCTAACTAGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ASSRSGLRHQVGTFLLVISVSSN*SGLTST Trigger: AGTACTAGTTAGACCGGATCAGTTGGAACTGACAGA...AATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTGGAGGCACAAACTGCTaGGGTAGTACAGGGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: PTFFLFTGGTCREKPSNPGGTNC*GSTGIM Trigger: CATTATCCCTGTACTACCTCAGCAGTTTGTGCCTCC...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTAGGGCTAGATCTCTGTaGTCCTCACTTACAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SVLQSFEQEWLKASSRNFRARSL*SSLTNL Trigger: TAGATTTGTAAGTGAGGAGCACAGAGATCTAGCCCT...AAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCCAGTGATGGGGCAGTaGTGTCCAAAGAAGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSPVMGQ*CPKKAT Trigger: GGTGGCCTTCTTTGGACAGCACTGCCCCATCACTGG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | CCCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PYFLLIYRWYLQRKTLKSSLLTD*LNCRRA Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...GGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTACTATTAGGCGAACCTaGGGGGCTGGGATAGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KFSCLIVSGSPYVFQTLLTIRRT*GAGIVG Trigger: GCCTACTATCCCAGCCCCCCAGGTTCGCCTAATAGT...AAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR TCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTCCCTCATGCGCACGATaGCTTGGTTTTCCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RNNSPVMLNSGEFYFILFPSCAR*LGFPWR Trigger: TCTCCAAGGAAAACCAAGTCATCGTGCGCATGAGGG...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR GCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTCTAACTAGTACTTCGTaGAGCTGTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTFFLFTGGTCREKPSNPLTSTS*SCPTFL Trigger: CAAGAAGGTGGGACAGCTGCACGAAGTACTAGTTAG...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | TTCAAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGAAATCTTCGCCTGTTaGTTTGTAAACCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FKFTSKFLIVLSQEPGPCEIFAC*FVNLNV Trigger: TACATTGAGGTTTACAAAGCAACAGGCGAAGATTTC...GCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGACATTTCGATTTAAAGTaGCCCCCATTAACACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FYREQGDRRLGMHSEASGHFDLK*PPLTQS Trigger: ACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATG...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCTCTGAGGTCATTGCTCACTGACTaGTTAAACTGTCGGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSDSFRITIRLSNTSSLRSLLTD*LNCRRA Trigger: AGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGA...CCTCAGAGAAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR CCA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACTCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLEVLLSDSFRITIRLSNSLERN*ATSLDV Trigger: GACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCTCTGAGGTCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSDSFRITIRLSNTSSLRSLERN*ATSLDV Trigger: GACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGA...CCTCAGAGAAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTATGCGCACGATGACTTaGTTTTCCTTGGAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSTVKVMMQTKNSHNLGIMRTMT*FSLERN Trigger: GTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCAAAAAGCATCTCCGGTTaGCCTACCATCTGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KASSRNFSLGYFKCQISPKSISG*PTIWVG Trigger: ACCTACCCAGATGGTAGGCCAACCGGAGATGCTTTT...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DSTVKVMMQTKNSHNLGIECLLL*QHREDL Trigger: GAGGTCTTCCCTATGCTGCCACAATAGAAGACATTC...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | TTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCTCTGAGGTACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSDSFRITIRLSNTSSLRYKPIL*VESWPG Trigger: ACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTA...CCTCAGAGAAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACTACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLEVLLSDSFRITIRLSNYKPIL*VESWPG Trigger: ACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTA...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | CCCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTACTCTCTCTGGATCTaGAAATCTGTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PYFLLIYRWYLQRKTLKSYSLWI*KSVIVG Trigger: CCCTACAATCACAGATTTTCAGATCCAGAGAGAGTA...GGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACAACCTTGCAATATCTTaGTCTGAAGATTGCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLEVLLSDSFRITIRLSNNLAIS*SEDCQG Trigger: GCCCTGGCAATCTTCAGATCAAGATATTGCAAGGTT...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTGGAGGCACAAACTGCTaGGGTAGTACAGGGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: KFSCLIVSGSPYVFQTLLGGTNC*GSTGIM Trigger: CATTATCCCTGTACTACCTCAGCAGTTTGTGCCTCC...AAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | GCAGAGTTGAATTTCAATTACCACACCAACAGTAGGCTAATTGCTGACATATATGGAGGCACAAACTGCTaGGGTAGTACAGGGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: AELNFNYHTNSRLIADIYGGTNC*GSTGIM Trigger: CATTATCCCTGTACTACCTCAGCAGTTTGTGCCTCC...ATATATGTCAGCAATTAGCCTACTGTTGGTGTGGTAATTGAAATTCAACTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTGTCCCACCTTCTTGTTaGCCAAATCCACGACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNNSPVMLNSGEFYFILFVPPSC*PNPRLS Trigger: GGAAAGTCGTGGATTTGGCCAACAAGAAGGTGGGAC...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | CCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTFFLFTGGTCREKPSNPECLLL*QHREDL Trigger: GAGGTCTTCCCTATGCTGCCACAATAGAAGACATTC...AGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGAGTGGCTTAAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRSGLRHQVGTFLLVISSECLLL*QHREDL Trigger: GAGGTCTTCCCTATGCTGCCACAATAGAAGACATTC...ACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTTAAGCCACTCCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCAGACAGGCATGGCGGTaGGGACAAGCCATTTCGATT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSRQAWR*GQAISI Trigger: AATCGAAATGGCTTGTCCCCACCGCCATGCCTGTCT...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| 3UTR CAA 72 bp | GTAGACAAACATCCCCTGAAATTGCTCGAAGTTCTCTaGTCTGATAGTTTCAGGATCACCATACGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VDKHPLKLLEVL*SDSFRITIRLS Trigger: TGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAATTTCAGGGGATGTTTGTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| 3UTR CAA 72 bp | AGAATTCCGTCAGCCTTTGATAGAAAACAACTAGAATaGTTCCTGGACGCAGCTGAGATTAAGATCCACACA | + |
|
Preference number: 4 (lower is better) Translates to: RIPSAFDRKQLE*FLDAAEIKIHT Trigger: TGTGTGGATCTTAATCTCAGCTGCGTCCAGGAACAATTCTAGTTGTTTTCTATCAAAGGCTGACGGAATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | AGTGTTTTAGGACACAGTAAGCTCTTTGCTTACGTTTGGTCTATGACTACTCTCTACTCTCTCTGGATCTaGAAATCTGTGATTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SVLGHSKLFAYVWSMTTLYSLWI*KSVIVG Trigger: CCCTACAATCACAGATTTTCAGATCCAGAGAGAGTA...GAGAGTAGTCATAGACCAAACGTAAGCAAAGAGCTTACTGTGTCCTAAAACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR TCA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCATGCAATATCTTGATCTaGAGATTGCCAGGGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KASSRNFSLGYFKCQISPCNILI*RLPGQT Trigger: GGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCA...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR TCA 90 bp | TGCTCAAGACAACACAAAATCCTAGTCAACTGTCCAGCACCTAATAGGACTGAAACTTGGTCGCAAGAATaGGCAAACACATTTTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: CSRQHKILVNCPAPNRTETWSQE*ANTFSN Trigger: ATTGGAAAATGTGTTTGCTCATTCTTGCGACCAAGT...TTCAGTCCTATTAGGTGCTGGACAGTTGACTAGGATTTTGTGTTGTCTTGAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCGGTTGGCCTACCATCTaGGTAGGTAACGAAGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSGWPTI*VGNEED Trigger: ATCCTCTTCGTTACCTACCCAGATGGTAGGCCAACC...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTTGCAATATCTTGATCTaGAGATTGCCAGGGCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KFSCLIVSGSPYVFQTLLCNILI*RLPGQT Trigger: GGTTTGCCCTGGCAATCTTCAGATCAAGATATTGCA...AAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCTAACTAGTACTTCGTaGAGCTGTCCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSLTSTS*SCPTFL Trigger: CAAGAAGGTGGGACAGCTGCACGAAGTACTAGTTAG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR GCA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAAGGGCTAGATCTCTGTaGTCCTCACTTACAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: HIKLPSKKALFYREQGDRRARSL*SSLTNL Trigger: TAGATTTGTAAGTGAGGAGCACAGAGATCTAGCCCT...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | AATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACATGTTTTTATGGTACTTCTaGGCAGCCATGAATGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTYEANIQLQLTLGTSYMFLWYF*AAMNAL Trigger: CAGAGCATTCATGGCTGCGCAGAAGTACCATAAAAA...CATGTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CCA 90 bp | GCAGAGTTGAATTTCAATTACCACACCAACAGTAGGCTAATTGCTGACATATATGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: AELNFNYHTNSRLIADIYECLLL*QHREDL Trigger: GAGGTCTTCCCTATGCTGCCACAATAGAAGACATTC...ATATATGTCAGCAATTAGCCTACTGTTGGTGTGGTAATTGAAATTCAACTCTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSLWVES*PGHLCV Trigger: TACACACAAATGACCAGGCCAGGACTCTACCCAAAG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTAGGGCTAGATCTCTGTaGTCCTCACTTACAAATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RNNSPVMLNSGEFYFILFRARSL*SSLTNL Trigger: TAGATTTGTAAGTGAGGAGCACAGAGATCTAGCCCT...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLVWDLRILRMHIKLPSVYEYL*KTPPGS Trigger: ACTTCCTGGGGGAGTTTTCCACAGATATTCGTACAC...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CCA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SDGQISVIKEAELNFNYHVYEYL*KTPPGS Trigger: ACTTCCTGGGGGAGTTTTCCACAGATATTCGTACAC...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR GCA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAGAAATCTTCGCCTGTTaGTTTGTAAACCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: HIKLPSKKALFYREQGDREIFAC*FVNLNV Trigger: TACATTGAGGTTTACAAAGCAACAGGCGAAGATTTC...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR GCA 90 bp | AGAAATAACTCCCCGGTGATGTTGAACAGTGGGGAATTCTATTTCATTCTATTTGAAATCTTCGCCTGTTaGTTTGTAAACCTCAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: RNNSPVMLNSGEFYFILFEIFAC*FVNLNV Trigger: TACATTGAGGTTTACAAAGCAACAGGCGAAGATTTC...AAATAGAATGAAATAGAATTCCCCACTGTTCAACATCACCGGGGAGTTATTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACTCATCCGAACCCAGCTaGGCTCCGGTGGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGLLSNRVGRECRSLTVDSSEPS*APVAPA Trigger: TGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATGA...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGATCATCCGAACCCAGCTaGGCTCCGGTGGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRSSEPS*APVAPA Trigger: TGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATGA...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTAAACTGTCGGAGGGCTaGGTCCAGCTGCGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALLGSLLTPAKGKAQDYCKLSEG*VQLRRG Trigger: TCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTT...ACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTAAACTGTCGGAGGGCTaGGTCCAGCTGCGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: EIPDCAQPGARSMRVACCKLSEG*VQLRRG Trigger: TCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTT...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | ACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTAAACTGTCGGAGGGCTaGGTCCAGCTGCGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: TSKFLIVLSQEPGPCVLLKLSEG*VQLRRG Trigger: TCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTT...AAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTAAAACTGTCGGAGGGCTaGGTCCAGCTGCGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LASQFFRASSRSGLRHQVKLSEG*VQLRRG Trigger: TCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTT...TACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | AACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTATCATCCGAACCCAGCTaGGCTCCGGTGGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NMCFGSNHFPAEFHQAAVSSEPS*APVAPA Trigger: TGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATGA...TACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS GCA 90 bp | GGACACAGAGTCACTCTTCTCAAAGTTCAGGCTTTCTGTCATCGCTaGGACATCCAGCTTGTCGATATCGGGAGAGCCCGGGCAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GHRVTLLKVQAFCHR*DIQLVDIGRARAAL Trigger: AAGTGCTGCCCGGGCTCTCCCGATATCGACAAGCTGGATGTCGCAGCGATGACAGAAAGCCTGAACTTTGAGAAGAGTGACTCTGTGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCCCGGGCAGCACTTCTaGAACTCTTTCCGAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: VRLCWVHFSLQQKARPRTPGQHF*NSFRRS Trigger: CGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGAGTGCTGCGCCACCCTaGGCAATATTGAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLSAAPP*AILSPL Trigger: CAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACT...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGAACTGGGCTACCTCATaGGATGTCCCTCCGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLNWATS*DVPPAI Trigger: AATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTT...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGGGGAACCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCCAAGAGCAGAGAAGGTaGATAAATGGCAGCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGTLRCMYGENTRGPEVQEQRR*INGSFG Trigger: ACCGAAGCTGCCATTTATCAACCTTCTCTGCTCTTG...GACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGGTTCCCCTTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAGTAACACATTCTTCTaGGAAGCCTCGGGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PGLLSNRVGRECRSLTVDSNTFF*EASGCK Trigger: CTTGCATCCCGAGGCTTCCAAGAAGAATGTGTTACT...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTAGTGCTGCGCCACCCTaGGCAATATTGAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRLCWVHFSLQQKARPRTSAAPP*AILSPL Trigger: CAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACT...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGAGTGCTGCGCCACCCTaGGCAATATTGAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVSAAPP*AILSPL Trigger: CAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACT...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGAACTGGGCTACCTCATaGGATGTCCCTCCGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVNWATS*DVPPAI Trigger: AATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTT...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAAACTGGGCTACCTCATaGGATGTCCCTCCGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLLTPAKGKAQDYCPNWATS*DVPPAI Trigger: AATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTT...TGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGTTACCCAGCAACTCCTaGTGCTTCCTCAGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLLPSNS*CFLRAF Trigger: GAACGCCCTGAGGAAGCACAAGGAGTTGCTGGGTAA...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACCCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGLLSNRVGRECRSLTVDPECLL*WQHRED Trigger: GTCTTCCCTATGCTGCCACAATAGAAGACATTCTGG...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACCAAGTCCATCCTCGGTaGCATACTGGGATAGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KALLGSLLTPAKGKAQDYQVHPR*HTGIVG Trigger: GCCTACTATCCCAGTATGCAACCGAGGATGGACTTG...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147342.8 |
||
| CDS TCA 90 bp | AACACATTCTTCTTGGAAGCCTCGGGATGCAAGATCTGCCTAATGTaGAGCTGCCCGTCAGTACAGAGACAGAAGGAAGTCCCTACCCCG | + |
|
Preference number: 5 (lower is better) Translates to: NTFFLEASGCKICLM*SCPSVQRQKEVPTP Trigger: CGGGGTAGGGACTTCCTTCTGTCTCTGTACTGACGGGCAGCTTCACATTAGGCAGATCTTGCATCCCGAGGCTTCCAAGAAGAATGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
||
| CDS TCA 90 bp | AGGAGAATCGGTTCAGCACCTGCTGAACTTCGGCAGCTGTGCTCCTaGAGAGCTCGATGTATCTTTTACCCAGCAACTCCTTGTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRIGSAPAELRQLCS*RARCIFYPATPCAS Trigger: GGAAGCACAAGGAGTTGCTGGGTAAAAGATACATCGAGCTCTTCAGGAGCACAGCTGCCGAAGTTCAGCAGGTGCTGAACCGATTCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | TTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGAGTAACACATTCTTCTaGGAAGCCTCGGGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FSLQQKARPRTTVQSCWPSNTFF*EASGCK Trigger: CTTGCATCCCGAGGCTTCCAAGAAGAATGTGTTACT...CGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAGGTGCATGTATGGAGAGAACACAAGGGGGCCAGAGGTCTACAACCCAGAGGGCTCGGAGATCATaGCTAAAATTATGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: PSGACMERTQGGQRSTTQRARRS*LKLCSP Trigger: TGGGGAACATAATTTTAGCAATGATCTCCGAGCCCT...CTGGGTTGTAGACCTCTGGCCCCCTTGTGTTCTCTCCATACATGCACCTGAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGAACTGGGCTACCTCATaGGATGTCCCTCCGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SLLTPAKGKAQDYCPIVLNWATS*DVPPAI Trigger: AATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTT...CAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CTGGCATCTCAGTTCTTCAGAGCTTCGAGCAGGAGTGGCTTAAGGCATCAAGTATTACCCAGCAACTCCTaGTGCTTCCTCAGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LASQFFRASSRSGLRHQVLPSNS*CFLRAF Trigger: GAACGCCCTGAGGAAGCACAAGGAGTTGCTGGGTAA...TACTTGATGCCTTAAGCCACTCCTGCTCGAAGCTCTGAAGAACTGAGATGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043781.14 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTACCCAGCAACTCCTaGTGCTTCCTCAGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVLPSNS*CFLRAF Trigger: GAACGCCCTGAGGAAGCACAAGGAGTTGCTGGGTAA...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAATCCTGGCCTGGTCATTaGTGTGTACAAGTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: RTTVQSCWPRMPQPDCRQSWPGH*CVQVHP Trigger: AGGATGGACTTGTACACACAAATGACCAGGCCAGGA...TTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS TCA 90 bp | CGACATCCAGCTTGTCGATATCGGGAGAGCCCGGGCAGCACTTCTTaGACTCTTTCCGAAGATCGAAAAAGGAATAGAAGCACTCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHPACRYRESPGSTS*TLSEDRKRNRSTQA Trigger: TGCCTGAGTGCTTCTATTCCTTTTTCGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGGCTCTCCCGATATCGACAAGCTGGATGTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTTTTAGGACACAGTAAGCTCTTTGCTTACGTTTGGTCTATGACTACTCTCTCATCCGAACCCAGCTaGGCTCCGGTGGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVLGHSKLFAYVWSMTTLSSEPS*APVAPA Trigger: TGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATGA...GAGAGTAGTCATAGACCAAACGTAAGCAAAGAGCTTACTGTGTCCTAAAACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGCCACCCTTGGCAATATaGAGTCCTTTGAAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLPPLAI*SPLKNL Trigger: AAGGTTCTTCAAAGGACTCAATATTGCCAAGGGTGG...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGCATGCGCACGATGACTaGGTTTTCCTTGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVHAHDD*VFLGEK Trigger: TTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATG...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACCATGCGCACGATGACTaGGTTTTCCTTGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: KALLGSLLTPAKGKAQDYHAHDD*VFLGEK Trigger: TTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATG...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGCCATCATCAAAGAAGCATTTCCTCCAGGTCATGGAGGTCAAATCAGAGGCAATTACCCAGCAACTCCTaGTGCTTCCTCAGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GHHQRSISSRSWRSNQRQLPSNS*CFLRAF Trigger: GAACGCCCTGAGGAAGCACAAGGAGTTGCTGGGTAA...TTGCCTCTGATTTGACCTCCATGACCTGGAGGAAATGCTTCTTTGATGATGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACCCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KALLGSLLTPAKGKAQDYPECLL*WQHRED Trigger: GTCTTCCCTATGCTGCCACAATAGAAGACATTCTGG...GTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GTAAGGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTCCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRLCWVHFSLQQKARPRTPECLL*WQHRED Trigger: GTCTTCCCTATGCTGCCACAATAGAAGACATTCTGG...AGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCAAGAGCAGAGAAGGTaGATAAATGGCAGCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: HFSLQQKARPRTTVQSCWQEQRR*INGSFG Trigger: ACCGAAGCTGCCATTTATCAACCTTCTCTGCTCTTG...CCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTCAAGTCCATCCTCGGTaGCATACTGGTAACCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: IEIPDCAQPGARSMRVACQVHPR*HTGNLG Trigger: TCCAAGGTTACCAGTATGCAACCGAGGATGGACTTG...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR CAA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTCCTGGCCTGGTCATTaGTGTGTACAAGTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: IEIPDCAQPGARSMRVACSWPGH*CVQVHP Trigger: AGGATGGACTTGTACACACAAATGACCAGGCCAGGA...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTATACAAACCCATTCTTaGGGTAGAGTCCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IEIPDCAQPGARSMRVACIQTHS*GRVLAW Trigger: CCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTAT...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS GCA 90 bp | GAGGAGACAGGCATGGCGGTGGGGACAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTGAACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EETGMAVGTSHFDLK*PPLTQSSSPQLNTE Trigger: TTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTGTCCCCACCGCCATGCCTGTCTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS-3UTR CAA 90 bp | AATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACATGTCATCCGAACCCAGCTaGGCTCCGGTGGCCCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NTYEANIQLQLTLGTSYMSSEPS*APVAPA Trigger: TGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATGA...CATGTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTAGTAACACATTCTTCTaGGAAGCCTCGGGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EIPDCAQPGARSMRVACCSNTFF*EASGCK Trigger: CTTGCATCCCGAGGCTTCCAAGAAGAATGTGTTACT...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAAGGGCTCGGAGATCATaGCTAAAATTATGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLLTPAKGKAQDYCPRARRS*LKLCSP Trigger: TGGGGAACATAATTTTAGCAATGATCTCCGAGCCCT...TGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAACCACCCTTGGCAATATaGAGTCCTTTGAAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: GLLSNRVGRECRSLTVDKPPLAI*SPLKNL Trigger: AAGGTTCTTCAAAGGACTCAATATTGCCAAGGGTGG...TTTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCACCACCCTTGGCAATATaGAGTCCTTTGAAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: LLGSLLTPAKGKAQDYCPPPLAI*SPLKNL Trigger: AAGGTTCTTCAAAGGACTCAATATTGCCAAGGGTGG...TGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGTTGGCCGAGGAAATCTTCGCCTGTaGCTTTGTAAACCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SHSSKRQGPGLLSNRVGRGNLRL*LCKPQC Trigger: ACATTGAGGTTTACAAAGCAACAGGCGAAGATTTCC...TCGGCCAACACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTCAAGAGCAGAGAAGGTaGATAAATGGCAGCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: SKFLIVLSQEPGPCVLLVQEQRR*INGSFG Trigger: ACCGAAGCTGCCATTTATCAACCTTCTCTGCTCTTG...AACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACTCCTGGCCTGGTCATTaGTGTGTACAAGTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: TCALDQITFPPSSIRQLYSWPGH*CVQVHP Trigger: AGGATGGACTTGTACACACAAATGACCAGGCCAGGA...GTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000108311.9 |
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| CDS CCA 90 bp | ACTGCTGGGGCCCTTAAATACAAACCCATTCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTACAAGTCCATCCTCGGTTGCATACT | + |
|
Preference number: 5 (lower is better) Translates to: TAGALKYKPILWVES*PGHLCVQVHPRLHT Trigger: AGTATGCAACCGAGGATGGACTTGTACACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTATTTAAGGGCCCCAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147342.8 |
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| CDS-3UTR CAA 90 bp | GCAGAGTTGAATTTCAATTACCACACCAACAGTAGGCTAATTGCTGACATATATAAACTGTCGGAGGGCTaGGTCCAGCTGCGGCGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: AELNFNYHTNSRLIADIYKLSEG*VQLRRG Trigger: TCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTT...ATATATGTCAGCAATTAGCCTACTGTTGGTGTGGTAATTGAAATTCAACTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | GAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTTGTAGGGCTCGGAGATCATaGCTAAAATTATGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EIPDCAQPGARSMRVACCRARRS*LKLCSP Trigger: TGGGGAACATAATTTTAGCAATGATCTCCGAGCCCT...ACAACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AGCCAGTGTTGTCCTTTGGCTCTCAGTATTAGTTCTTCTCCGCCTGCCACATCCAGGGCTCGGAGATCATaGCTAAAATTATGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SQCCPLALSISSSPPATSRARRS*LKLCSP Trigger: TGGGGAACATAATTTTAGCAATGATCTCCGAGCCCT...GGATGTGGCAGGCGGAGAAGAACTAATACTGAGAGCCAAAGGACAACACTGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | GGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACAAATCAATAAGTTCCATCTaGCTGCAAGTGCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLLSNRVGRECRSLTVDKSISSI*LQVPLS Trigger: TGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGA...TTTGTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGACTACTGTCCAATCGTGTTGGCCGAGAATGCCGCAGCCTGACTGTAGACGCAATATTGAGTCCTTaGAAGAACCTTGCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: PGLLSNRVGRECRSLTVDAILSP*KNLAIS Trigger: AGATATTGCAAGGTTCTTCAAAGGACTCAATATTGC...GTCTACAGTCAGGCTGCGGCATTCTCGGCCAACACGATTGGACAGTAGTCCTGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | ATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTTGCTTGTCCACCCTTGGCAATATaGAGTCCTTTGAAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: IEIPDCAQPGARSMRVACPPLAI*SPLKNL Trigger: AAGGTTCTTCAAAGGACTCAATATTGCCAAGGGTGG...ACAAGCAACACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTCCAATCGTGGGAAATCTTCGCCTGTaGCTTTGTAAACCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: GSLLTPAKGKAQDYCPIVGNLRL*LCKPQC Trigger: ACATTGAGGTTTACAAAGCAACAGGCGAAGATTTCC...CACGATTGGACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGTGGAAATCTTCGCCTGTaGCTTTGTAAACCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: ALLGSLLTPAKGKAQDYCGNLRL*LCKPQC Trigger: ACATTGAGGTTTACAAAGCAACAGGCGAAGATTTCC...ACAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCAAACTGGGCTACCTCATaGGATGTCCCTCCGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: NIFQAGKSLAIIKEAFPPNWATS*DVPPAI Trigger: AATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTT...TGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACCATGCGCACGATGACTaGGTTTTCCTTGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: TCALDQITFPPSSIRQLYHAHDD*VFLGEK Trigger: TTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATG...GTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS CCA 90 bp | GGCTCGGAGATCATTGCTAAAATTATGTTCCCCATGTCTTCAACTTaGGAGGCTCCGTATCGGGACACAGAGTCACTCTTCTCAAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSEIIAKIMFPMSST*EAPYRDTESLFSKF Trigger: GAACTTTGAGAAGAGTGACTCTGTGTCCCGATACGGAGCCTCCCAAGTTGAAGACATGGGGAACATAATTTTAGCAATGATCTCCGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTTGCTGGGTTCACTTCTCACTCCAGCAAAAGGCAAGGCCCAGGACTACTGGCAATATTGAGTCCTTaGAAGAACCTTGCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: GFAGFTSHSSKRQGPGLLAILSP*KNLAIS Trigger: AGATATTGCAAGGTTCTTCAAAGGACTCAATATTGC...CAGTAGTCCTGGGCCTTGCCTTTTGCTGGAGTGAGAAGTGAACCCAGCAAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TTCAAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCCATGCGCACGATGACTaGGTTTTCCTTGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: FKFTSKFLIVLSQEPGPCHAHDD*VFLGEK Trigger: TTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATG...GCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTTTACCCAGCAACTCCTaGTGCTTCCTCAGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DSTVKVMMQTKNSHNLGILPSNS*CFLRAF Trigger: GAACGCCCTGAGGAAGCACAAGGAGTTGCTGGGTAA...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGACCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: FYREQGDRRLGMHSEASGPECLL*WQHRED Trigger: GTCTTCCCTATGCTGCCACAATAGAAGACATTCTGG...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGACAAGAGCAGAGAAGGTaGATAAATGGCAGCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: FYREQGDRRLGMHSEASGQEQRR*INGSFG Trigger: ACCGAAGCTGCCATTTATCAACCTTCTCTGCTCTTG...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGTGTGTGTGTGGAAGGGGAACCAAGTCCATCCTCGGTaGCATACTGGTAACCTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQRKTLKSFNKVCVWKGNQVHPR*HTGNLG Trigger: TCCAAGGTTACCAGTATGCAACCGAGGATGGACTTG...GTTCCCCTTCCACACACACACCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108311.9 |
||
| CDS CCA 90 bp | CCTGGTGATTCAATACCATGTGCACTCCATGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGTCCAGAATGTCTTCTATTGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGDSIPCALHVYEYL*KTPPGSPECLLLWQ Trigger: CTGCCACAATAGAAGACATTCTGGACTTCCTGGGGGAGTTTTCCACAGATATTCGTACACATGGAGTGCACATGGTATTGAATCACCAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | ACATGTGCTTTGGATCAAATCACTTTCCCGCCGAGTTCCATCAGGCAGCTGTACTCAATAAGTTCCATCTaGCTGCAAGTGCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TCALDQITFPPSSIRQLYSISSI*LQVPLS Trigger: TGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGA...GTACAGCTGCCTGATGGAACTCGGCGGGAAAGTGATTTGATCCAAAGCACATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | AAATTCACATCGAAATTCCTGATTGTGCTCAGCCAGGAGCCAGGTCCATGCGTGTCAATAAGTTCCATCTaGCTGCAAGTGCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KFTSKFLIVLSQEPGPCVSISSI*LQVPLS Trigger: TGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGA...CACGCATGGACCTGGCTCCTGGCTGAGCACAATCAGGAATTTCGATGTGAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCTCTGAGGTTACCCAGCAACTCCTaGTGCTTCCTCAGGGCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSDSFRITIRLSNTSSLRLPSNS*CFLRAF Trigger: GAACGCCCTGAGGAAGCACAAGGAGTTGCTGGGTAA...CCTCAGAGAAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCACCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NIFQAGKSLAIIKEAFPPPECLL*WQHRED Trigger: GTCTTCCCTATGCTGCCACAATAGAAGACATTCTGG...TGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS GCA 90 bp | ATGGTAACTTACATGGCGGTGGGGACAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTGAACACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: MVTYMAVGTSHFDLK*PPLTQSSSPQLNTE Trigger: TTCAGTGTTCAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTGTCCCCACCGCCATGTAAGTTACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108311.9 |
||
| CDS-3UTR CAA 90 bp | AATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACATGCCCGGGCAGCACTTCTaGAACTCTTTCCGAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: NTYEANIQLQLTLGTSYMPGQHF*NSFRRS Trigger: CGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGG...CATGTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGATCAATAAGTTCCATCTaGCTGCAAGTGCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FYREQGDRRLGMHSEASGSISSI*LQVPLS Trigger: TGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGA...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AACATCTTCCAGGCAGGTAAGAGCTTGGCCATCATCAAAGAAGCATTTCCTCCACCACCCTTGGCAATATaGAGTCCTTTGAAGAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: NIFQAGKSLAIIKEAFPPPPLAI*SPLKNL Trigger: AAGGTTCTTCAAAGGACTCAATATTGCCAAGGGTGG...TGGAGGAAATGCTTCTTTGATGATGGCCAAGCTCTTACCTGCCTGGAAGATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACAACTGGGCTACCTCATaGGATGTCCCTCCGGCAATT | + |
|
Preference number: 5 (lower is better) Translates to: LLEVLLSDSFRITIRLSNNWATS*DVPPAI Trigger: AATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTT...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCCCGGGCAGCACTTCTaGAACTCTTTCCGAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: KFSCLIVSGSPYVFQTLLPGQHF*NSFRRS Trigger: CGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGG...AAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 |
||
| CDS-3UTR CAA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAAGTGCTGCGCCACCCTaGGCAATATTGAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HIKLPSKKALFYREQGDRSAAPP*AILSPL Trigger: CAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACT...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTCATGCGCACGATGACTaGGTTTTCCTTGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: DSTVKVMMQTKNSHNLGIHAHDD*VFLGEK Trigger: TTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATG...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | GACTCCACAGTCAAGGTGATGATGCAAACTAAAAATAGCCACAACCTAGGCATTCCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: DSTVKVMMQTKNSHNLGIPECLL*WQHRED Trigger: GTCTTCCCTATGCTGCCACAATAGAAGACATTCTGG...AATGCCTAGGTTGTGGCTATTTTTAGTTTGCATCATCACCTTGACTGTGGAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCTCTGAGGATACAAACCCATTCTTaGGGTAGAGTCCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSDSFRITIRLSNTSSLRIQTHS*GRVLAW Trigger: CCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTAT...CCTCAGAGAAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TTGCTCGAAGTTCTCTTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACATACAAACCCATTCTTaGGGTAGAGTCCTGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLEVLLSDSFRITIRLSNIQTHS*GRVLAW Trigger: CCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTAT...GTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAAGAGAACTTCGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CTTTCCTTAGTTTGGGATTTACGTATTCTAAGAATGCACATTAAGTTACCTAGCCCCGGGCAGCACTTCTaGAACTCTTTCCGAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLVWDLRILRMHIKLPSPGQHF*NSFRRS Trigger: CGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGG...GCTAGGTAACTTAATGTGCATTCTTAGAATACGTAAATCCCAAACTAAGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACCCCGGGCAGCACTTCTaGAACTCTTTCCGAAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHPGQHF*NSFRRS Trigger: CGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGG...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | TTTTACAGAGAACAGGGAGACAGAAGATTGGGAATGCACAGTGAGGCTTCCGGAGCAATATTGAGTCCTTaGAAGAACCTTGCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: FYREQGDRRLGMHSEASGAILSP*KNLAIS Trigger: AGATATTGCAAGGTTCTTCAAAGGACTCAATATTGC...TCCGGAAGCCTCACTGTGCATTCCCAATCTTCTGTCTCCCTGTTCTCTGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AATAATACATATGAAGCCAACATTCAGTTACAGCTCACACTAGGAACTAGCTACAGTGCTGCGCCACCCTaGGCAATATTGAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NNTYEANIQLQLTLGTSYSAAPP*AILSPL Trigger: CAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACT...GTAGCTAGTTCCTAGTGTGAGCTGTAACTGAATGTTGGCTTCATATGTATTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGAGTAACACATTCTTCTaGGAAGCCTCGGGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFTGGTCREKPSNPLTRSNTFF*EASGCK Trigger: CTTGCATCCCGAGGCTTCCAAGAAGAATGTGTTACT...CCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACAGTGCTGCGCCACCCTaGGCAATATTGAGTCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHSAAPP*AILSPL Trigger: CAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACT...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | CCCTACTTTCTTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCGGAAATCTTCGCCTGTaGCTTTGTAAACCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: PYFLLIYRWYLQRKTLKSGNLRL*LCKPQC Trigger: ACATTGAGGTTTACAAAGCAACAGGCGAAGATTTCC...GGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAAGAAAGTAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCACAAGAGCAGAGAAGGTaGATAAATGGCAGCTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: KASSRNFSLGYFKCQISPQEQRR*INGSFG Trigger: ACCGAAGCTGCCATTTATCAACCTTCTCTGCTCTTG...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAAGGGCTCGGAGATCATaGCTAAAATTATGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: HIKLPSKKALFYREQGDRRARRS*LKLCSP Trigger: TGGGGAACATAATTTTAGCAATGATCTCCGAGCCCT...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCATCAAGTAGGAACTTTTCTCTTGGTTATTTCAAGTGCCAGATTTCACCAAGGGCTCGGAGATCATaGCTAAAATTATGTTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KASSRNFSLGYFKCQISPRARRS*LKLCSP Trigger: TGGGGAACATAATTTTAGCAATGATCTCCGAGCCCT...TGGTGAAATCTGGCACTTGAAATAACCAAGAGAAAAGTTCCTACTTGATGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACAGTAACACATTCTTCTaGGAAGCCTCGGGATGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHSNTFF*EASGCK Trigger: CTTGCATCCCGAGGCTTCCAAGAAGAATGTGTTACT...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGATCAATAAGTTCCATCTaGCTGCAAGTGCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HIKLPSKKALFYREQGDRSISSI*LQVPLS Trigger: TGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGA...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | CACATTAAGTTACCTAGCAAGAAGGCTTTATTTTACAGAGAACAGGGAGACAGAGGAAATCTTCGCCTGTaGCTTTGTAAACCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: HIKLPSKKALFYREQGDRGNLRL*LCKPQC Trigger: ACATTGAGGTTTACAAAGCAACAGGCGAAGATTTCC...TCTGTCTCCCTGTTCTCTGTAAAATAAAGCCTTCTTGCTAGGTAACTTAATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACCATGCGCACGATGACTaGGTTTTCCTTGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHHAHDD*VFLGEK Trigger: TTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATG...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCTGATAGTTTCAGGATCACCATACGTCTTTCAAACACTTCTTCTCTGAGGGCAATATTGAGTCCTTaGAAGAACCTTGCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: LSDSFRITIRLSNTSSLRAILSP*KNLAIS Trigger: AGATATTGCAAGGTTCTTCAAAGGACTCAATATTGC...CCTCAGAGAAGAAGTGTTTGAAAGACGTATGGTGATCCTGAAACTATCAGACAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000147342.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACTCAATAAGTTCCATCTaGCTGCAAGTGCCACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHSISSI*LQVPLS Trigger: TGAAAGTGGCACTTGCAGCAAGATGGAACTTATTGA...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTATTTACAGGTGGTACCTGCAGAGAAAAACCCTCAAATCCTTTAACAAGGGCAATATTGAGTCCTTaGAAGAACCTTGCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: FLFTGGTCREKPSNPLTRAILSP*KNLAIS Trigger: AGATATTGCAAGGTTCTTCAAAGGACTCAATATTGC...CCTTGTTAAAGGATTTGAGGGTTTTTCTCTGCAGGTACCACCTGTAAATAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000043781.14 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACGGAAATCTTCGCCTGTaGCTTTGTAAACCTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHGNLRL*LCKPQC Trigger: ACATTGAGGTTTACAAAGCAACAGGCGAAGATTTCC...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS-3UTR CAA 90 bp | TCTGATGGACAGATTTCTGTGATAAAAGAAGCAGAGTTGAATTTCAATTACCACGCAATATTGAGTCCTTaGAAGAACCTTGCAATATCT | + |
|
Preference number: 5 (lower is better) Translates to: SDGQISVIKEAELNFNYHAILSP*KNLAIS Trigger: AGATATTGCAAGGTTCTTCAAAGGACTCAATATTGC...GTGGTAATTGAAATTCAACTCTGCTTCTTTTATCACAGAAATCTGTCCATCAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155519.2 |
||
| CDS TCA 72 bp | CATCCGAACCCAGCTTGGCTCCGGTGGCCCCAGCAGTaGTCCCAAAAAGCACCACCAAGTAATCCGGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: HPNPAWLRWPQQ*SQKAPPSNPET Trigger: CGTCTCCGGATTACTTGGTGGTGCTTTTTGGGATCACTGCTGGGGCCACCGGAGCCAAGCTGGGTTCGGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 |
||
| CDS CAA 90 bp | TGCAGTGGAGGGCTGCAGTGCCCGTGGGTTCAAGAGCAGAGAAGGTaGATAAATGGCAGCTTCGGTAGGAATCACAGCCGTGGGAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CSGGLQCPWVQEQRR*INGSFGRNHSRGSW Trigger: CCAGCTCCCACGGCTGTGATTCCTACCGAAGCTGCCATTTATCAACCTTCTCTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS CCA 72 bp | TGCCGGGTAGTATGCAGTGGAGGGCTGCAGTGCCCGTaGGTTCAAGAGCAGAGAAGGTTGATAAATGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: CRVVCSGGLQCP*VQEQRRLINGS Trigger: GCTGCCATTTATCAACCTTCTCTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACTGCATACTACCCGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS GCA 72 bp | AGTGCCTGCCGGGTAGTATGCAGTGGAGGGCTGCAGTaGCCGTGGGTTCAAGAGCAGAGAAGGTTGATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: SACRVVCSGGLQ*PWVQEQRRLIN Trigger: ATTTATCAACCTTCTCTGCTCTTGAACCCACGGGCACTGCAGCCCTCCACTGCATACTACCCGGCAGGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
||
| CDS CAA 72 bp | GGGAGCCCCCTCATGCGCACGATGACTTGGTTTTCCTaGGAGAGAAACTGGGCTACCTCATTGGATGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPLMRTMTWFS*ERNWATSLDVP Trigger: AGGGACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCATGAGGGGGCTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS TCA 72 bp | GGAAGTCCCTACCCCGATGTTCAGTTCATTGCTCACTaGCTGGTTAAACTGTCGGAGGGCTTGGTCCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GSPYPDVQFIAH*LVKLSEGLVQL Trigger: CAGCTGGACCAAGCCCTCCGACAGTTTAACCAGTCAGTGAGCAATGAACTGAACATCGGGGTAGGGACTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
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| CDS GCA 72 bp | ACTGACTGGTTAAACTGTCGGAGGGCTTGGTCCAGCTaGGGCGCGGAAGACAGGTTTTCGGCGTCTATTTTA | + |
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Preference number: 6 (lower is better) Translates to: TDWLNCRRAWSS*GAEDRFSASIL Trigger: TAAAATAGACGCCGAAAACCTGTCTTCCGCGCCGCAGCTGGACCAAGCCCTCCGACAGTTTAACCAGTCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
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| CDS GCA 72 bp | TTCTCCGTTCCTCCGGCCCTGAGCATTCAGGCAAAGTaGTGCGCCACCCTTGGCAATATTGAGTCCTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: FSVPPALSIQAK*CATLGNIESFE Trigger: TTCAAAGGACTCAATATTGCCAAGGGTGGCGCAGCACTTTGCCTGAATGCTCAGGGCCGGAGGAACGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS TCA 72 bp | CAGCATAGGGAAGACCTCGCAGACGTATGCAGTCTCTaGCATTCGTGGGAGGCACAAACTGCTGAGGTAGTA | + |
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Preference number: 6 (lower is better) Translates to: QHREDLADVCSL*HSWEAQTAEVV Trigger: TACTACCTCAGCAGTTTGTGCCTCCCACGAATGTCAGAGACTGCATACGTCTGCGAGGTCTTCCCTATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS TCA 72 bp | TTCTTGGAAGCCTCGGGATGCAAGATCTGCCTAATGTaGAGCTGCCCGTCAGTACAGAGACAGAAGGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: FLEASGCKICLM*SCPSVQRQKEV Trigger: GACTTCCTTCTGTCTCTGTACTGACGGGCAGCTTCACATTAGGCAGATCTTGCATCCCGAGGCTTCCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
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| CDS GCA 72 bp | GGCATGGCGGTGGGGACAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: GMAVGTSHFDLK*PPLTQSSSPQL Trigger: CAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTGTCCCCACCGCCATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS CAA 72 bp | TGGAAAACTCCCCCAGGAAGTCCAGAATGTCTTCTATaGTGGCAGCATAGGGAAGACCTCGCAGACGTATGC | + |
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Preference number: 6 (lower is better) Translates to: WKTPPGSPECLL*WQHREDLADVC Trigger: GCATACGTCTGCGAGGTCTTCCCTATGCTGCCACAATAGAAGACATTCTGGACTTCCTGGGGGAGTTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS TCA 72 bp | GCTTGTCGATATCGGGAGAGCCCGGGCAGCACTTCTTaGACTCTTTCCGAAGATCGAAAAAGGAATAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: ACRYRESPGSTS*TLSEDRKRNRS Trigger: GCTTCTATTCCTTTTTCGATCTTCGGAAAGAGTTCAAGAAGTGCTGCCCGGGCTCTCCCGATATCGACAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
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| CDS CCA 72 bp | AAAACTCCCCCAGGAAGTCCAGAATGTCTTCTATTGTaGCAGCATAGGGAAGACCTCGCAGACGTATGCAGT | + |
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Preference number: 6 (lower is better) Translates to: KTPPGSPECLLL*QHREDLADVCS Trigger: ACTGCATACGTCTGCGAGGTCTTCCCTATGCTGCCACAATAGAAGACATTCTGGACTTCCTGGGGGAGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS CAA 72 bp | AAACCCATTCTTTGGGTAGAGTCCTGGCCTGGTCATTaGTGTGTACAAGTCCATCCTCGGTTGCATACTGGG | + |
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Preference number: 6 (lower is better) Translates to: KPILWVESWPGH*CVQVHPRLHTG Trigger: CCCAGTATGCAACCGAGGATGGACTTGTACACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147342.8 |
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| CDS TCA 72 bp | ATCTGGATAAAGGCATCTCCTGACGGGCGTCCCTGGTaGTTCAATACCATGTGCACTCCATGTGTACGAATA | + |
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Preference number: 6 (lower is better) Translates to: IWIKASPDGRPW*FNTMCTPCVRI Trigger: TATTCGTACACATGGAGTGCACATGGTATTGAATCACCAGGGACGCCCGTCAGGAGATGCCTTTATCCAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 |
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| CDS GCA 72 bp | TACATGGCGGTGGGGACAAGCCATTTCGATTTAAAGTaGCCCCCATTAACACAAAGTTCATCTCCTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: YMAVGTSHFDLK*PPLTQSSSPQL Trigger: CAGCTGAGGAGATGAACTTTGTGTTAATGGGGGGCACTTTAAATCGAAATGGCTTGTCCCCACCGCCATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000108311.9 |
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| CDS CCA 72 bp | ATGCGCACGATGACTTGGTTTTCCTTGGAGAGAAACTaGGCTACCTCATTGGATGTCCCTCCGGCAATTTTA | + |
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Preference number: 6 (lower is better) Translates to: MRTMTWFSLERN*ATSLDVPPAIL Trigger: TAAAATTGCCGGAGGGACATCCAATGAGGTAGCCCAGTTTCTCTCCAAGGAAAACCAAGTCATCGTGCGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS CCA 72 bp | GCCCTTAAATACAAACCCATTCTTTGGGTAGAGTCCTaGCCTGGTCATTTGTGTGTACAAGTCCATCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: ALKYKPILWVES*PGHLCVQVHPR Trigger: CCGAGGATGGACTTGTACACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTATTTAAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147342.8 |
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| CDS CAA 72 bp | AAACCCATTCTTTGGGTAGAGTCCTGGCCTGGTCATTaGTGTGTACAAGTCCATCCTCGGTTGCATACTGGT | + |
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Preference number: 6 (lower is better) Translates to: KPILWVESWPGH*CVQVHPRLHTG Trigger: ACCAGTATGCAACCGAGGATGGACTTGTACACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108310.8 ENSMUST00000108311.9 |
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| CDS CAA 90 bp | CTTAAATACAAACCCATTCTTTGGGTAGAGTCCTGGCCTGGTCATTaGTGTGTACAAGTCCATCCTCGGTTGCATACTGGGATAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LKYKPILWVESWPGH*CVQVHPRLHTGIVG Trigger: GCCTACTATCCCAGTATGCAACCGAGGATGGACTTGTACACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTATTTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147342.8 |
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| CDS CCA 72 bp | CTAACTGCTGGGGCCCTTAAATACAAACCCATTCTTTaGGTAGAGTCCTGGCCTGGTCATTTGTGTGTACAA | + |
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Preference number: 6 (lower is better) Translates to: LTAGALKYKPIL*VESWPGHLCVQ Trigger: TTGTACACACAAATGACCAGGCCAGGACTCTACCCAAAGAATGGGTTTGTATTTAAGGGCCCCAGCAGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147342.8 |
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| CDS CCA 72 bp | ATCATTGCTAAAATTATGTTCCCCATGTCTTCAACTTaGGAGGCTCCGTATCGGGACACAGAGTCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IIAKIMFPMSST*EAPYRDTESLF Trigger: GAAGAGTGACTCTGTGTCCCGATACGGAGCCTCCCAAGTTGAAGACATGGGGAACATAATTTTAGCAATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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| CDS TCA 72 bp | TTAGTTTCTTCTTTACAATCCTCTGTCAGTTCCAACTaGTCCGGTCTAACTAGTACTTCGTGCAGCTGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LVSSLQSSVSSN*SGLTSTSCSCP Trigger: GGGACAGCTGCACGAAGTACTAGTTAGACCGGATCAGTTGGAACTGACAGAGGATTGTAAAGAAGAAACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000155519.2 |
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| CDS CCA 72 bp | TCAATACCATGTGCACTCCATGTGTACGAATATCTGTaGAAAACTCCCCCAGGAAGTCCAGAATGTCTTCTA | + |
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Preference number: 6 (lower is better) Translates to: SIPCALHVYEYL*KTPPGSPECLL Trigger: TAGAAGACATTCTGGACTTCCTGGGGGAGTTTTCCACAGATATTCGTACACATGGAGTGCACATGGTATTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000043781.14 ENSMUST00000108310.8 ENSMUST00000108311.9 ENSMUST00000108313.8 ENSMUST00000147342.8 ENSMUST00000155519.2 |
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