Pregenerated sensors for ESR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019768Ensembl transcript IDs: ENSMUST00000067086.14, ENSMUST00000105588.8, ENSMUST00000105589.2, ENSMUST00000105590.8
Found 358 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | CAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCTaGGAAGCTGCTGCCCTGGCCAGGTCATTCTCCACATTTCTCCCT | + |
Preference number: 1 (lower is better) Translates to: QSSLTVHGGICEVHL*EAAALARSFSTFLP Trigger: AGGGAGAAATGTGGAGAATGACCTGGCCAGGGCAGCAGCTTCCCAGAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR GCA 90 bp | ACTTTGAAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTaGTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAA | + |
Preference number: 1 (lower is better) Translates to: TLKSLLRLPLGAIMK*LSEVKCLLSRLGSQ Trigger: TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTTCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CCA 90 bp | AGAGACGTACTGACAAATAGAGAGATGTATCTTCAAGAGAGTGGTTaGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCTTTG | + |
Preference number: 1 (lower is better) Translates to: RDVLTNREMYLQESG*TLNLSIRSAACIAL Trigger: CAAAGCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGAAGATACATCTCTCTATTTGTCAGTACGTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR TCA 90 bp | AGACCTGTACCAAAGAGAGTCATGGTTGCCTTATGTGCTACTGTATaGCTCTATTTGCCTTTAAAAGACTTAGGTTCCCTAAGCAGGTCT | + |
Preference number: 1 (lower is better) Translates to: RPVPKRVMVALCATV*LYLPLKDLGSLSRS Trigger: AGACCTGCTTAGGGAACCTAAGTCTTTTAAAGGCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGGTACAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR TCA 90 bp | CACAGAAAGCGTTGTTTGTACGCTGTGAAGGAAAATAAACTGGCGTaGTGTCACTTATTAATTCAAGTCTCGACGACCAATGACCTCTCT | + |
Preference number: 1 (lower is better) Translates to: HRKRCLYAVKENKLA*CHLLIQVSTTNDLS Trigger: AGAGAGGTCATTGGTCGTCGAGACTTGAATTAATAAGTGACATCACGCCAGTTTATTTTCCTTCACAGCGTACAAACAACGCTTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR GCA 90 bp | CAACCTCCAAAGACCTGTACCAAAGAGAGTCATGGTTGCCTTATGTaGTACTGTATGACTCTATTTGCCTTTAAAAGACTTAGGTTCCCT | + |
Preference number: 1 (lower is better) Translates to: QPPKTCTKESHGCLM*YCMTLFAFKRLRFP Trigger: AGGGAACCTAAGTCTTTTAAAGGCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGGTACAGGTCTTTGGAGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR CCA 90 bp | AGTAGCAAGTGCCACATATGCAACCCAGAGCAGTATTTAAGCACGTaGTTTAGTTTTCTCAGACTAACTCTACTGGATTTTCCTGTGCAA | + |
Preference number: 1 (lower is better) Translates to: SSKCHICNPEQYLST*FSFLRLTLLDFPVQ Trigger: TTGCACAGGAAAATCCAGTAGAGTTAGTCTGAGAAAACTAAACCACGTGCTTAAATACTGCTCTGGGTTGCATATGTGGCACTTGCTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR CCA 90 bp | TTGCCGCTACTCTCTTCCTTGGAACTCAAATTGCCATTTTGGAAATaGCTGCCAGTAGAGCTAGTATTACTTTATTACAGTGCAGACAGA | + |
Preference number: 1 (lower is better) Translates to: LPLLSSLELKLPFWK*LPVELVLLYYSADR Trigger: TCTGTCTGCACTGTAATAAAGTAATACTAGCTCTACTGGCAGCCATTTCCAAAATGGCAATTTGAGTTCCAAGGAAGAGAGTAGCGGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR CCA 90 bp | TCACTGTTGCCGCTACTCTCTTCCTTGGAACTCAAATTGCCATTTTaGAAATGGCTGCCAGTAGAGCTAGTATTACTTTATTACAGTGCA | + |
Preference number: 1 (lower is better) Translates to: SLLPLLSSLELKLPF*KWLPVELVLLYYSA Trigger: TGCACTGTAATAAAGTAATACTAGCTCTACTGGCAGCCATTTCCAAAATGGCAATTTGAGTTCCAAGGAAGAGAGTAGCGGCAACAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR TCA 90 bp | CCTACAGCCCTCATGAAGGAGACTAATTCATTCCAGGGTATTAACTaGAATAGACTTTCTGTTTCCCACAAGTCATGGGAAGCAAGAATT | + |
Preference number: 1 (lower is better) Translates to: PTALMKETNSFQGIN*NRLSVSHKSWEARI Trigger: AATTCTTGCTTCCCATGACTTGTGGGAAACAGAAAGTCTATTTCAGTTAATACCCTGGAATGAATTAGTCTCCTTCATGAGGGCTGTAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR TCA 90 bp | CCCATATCTCCCTACCCACCTCATGCTGACTCTTTGAGTAGATTGTaGCATTCAAATTTTAAATTACCTCCAGGTGAGGGTAAAGTACAA | + |
Preference number: 1 (lower is better) Translates to: PISPYPPHADSLSRL*HSNFKLPPGEGKVQ Trigger: TTGTACTTTACCCTCACCTGGAGGTAATTTAAAATTTGAATGTCACAATCTACTCAAAGAGTCAGCATGAGGTGGGTAGGGAGATATGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR GCA 90 bp | AAGCTGGATCAACCTCCAAAGACCTGTACCAAAGAGAGTCATGGTTaGCTTATGTGCTACTGTATGACTCTATTTGCCTTTAAAAGACTT | + |
Preference number: 1 (lower is better) Translates to: KLDQPPKTCTKESHG*LMCYCMTLFAFKRL Trigger: AAGTCTTTTAAAGGCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGGTACAGGTCTTTGGAGGTTGATCCAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR CCA 90 bp | TATCTCCAATGTTACCAGGGAAATCTGTCAAAGACACAACTTCCTTaGGGTCTAGACATTGTCACCTACATTGATAGCATCTTTTCTTTG | + |
Preference number: 1 (lower is better) Translates to: YLQCYQGNLSKTQLP*GLDIVTYIDSIFSL Trigger: CAAAGAAAAGATGCTATCAATGTAGGTGACAATGTCTAGACCCCAAGGAAGTTGTGTCTTTGACAGATTTCCCTGGTAACATTGGAGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR CCA 90 bp | TTATCAGTAAGTCGCTTATTTGTTCAGCCCCAAAGGCATAAGATATaGCATGGAAAGTCATATCTCCAATGTTACCAGGGAAATCTGTCA | + |
Preference number: 1 (lower is better) Translates to: LSVSRLFVQPQRHKI*HGKSYLQCYQGNLS Trigger: TGACAGATTTCCCTGGTAACATTGGAGATATGACTTTCCATGCCATATCTTATGCCTTTGGGGCTGAACAAATAAGCGACTTACTGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR TCA 90 bp | TGGGTCTCAACAAGTAGCTTCAATGCAGTTATCTCAATTCATTCATaGAGACTGAAGACTATAGGAATCCTCATAGTTAGTGACGTAGCA | + |
Preference number: 1 (lower is better) Translates to: WVSTSSFNAVISIHS*RLKTIGILIVSDVA Trigger: TGCTACGTCACTAACTATGAGGATTCCTATAGTCTTCAGTCTTCATGAATGAATTGAGATAACTGCATTGAAGCTACTTGTTGAGACCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR TCA 90 bp | TTATTCAAATTCCCATATCTCCCTACCCACCTCATGCTGACTCTTTaGGTAGATTGTGACATTCAAATTTTAAATTACCTCCAGGTGAGG | + |
Preference number: 1 (lower is better) Translates to: LFKFPYLPTHLMLTL*VDCDIQILNYLQVR Trigger: CCTCACCTGGAGGTAATTTAAAATTTGAATGTCACAATCTACTCAAAGAGTCAGCATGAGGTGGGTAGGGAGATATGGGAATTTGAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR GCA 90 bp | TCCCAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCTGGGAATCAAGCTGCCTTTACTaGAAGCCCCAGGGGCAGAAG | + |
Preference number: 2 (lower is better) Translates to: SQSSLTVHGGICEVHLWESSCLY*KPQGQK Trigger: CTTCTGCCCCTGGGGCTTGCAGTAAAGGCAGCTTGA...TTCCCAGAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR GCA 90 bp | CATGGATCCCAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCCCCTGGAATCCCTTTTaGCTGTTCCCAACAGAAGAC | + |
Preference number: 2 (lower is better) Translates to: HGSQSSLTVHGGICEVHLPWNPF*LFPTED Trigger: GTCTTCTGTTGGGAACAGGCAAAAGGGATTCCAGGG...GAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTGGGATCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CCCATGCCTTTCCCCAAGTTCCTGGAGCATCTACAGGAACACAGGTATCTGATGGGGAAGCTGCTGCCCTaGCCAGGTCATTCTCCACAT | + |
Preference number: 2 (lower is better) Translates to: PMPFPKFLEHLQEHRYLMGKLLP*PGHSPH Trigger: ATGTGGAGAATGACCTGGCCAGGGCAGCAGCTTCCC...CATCAGATACCTGTGTTCCTGTAGATGCTCCAGGAACTTGGGGAAAGGCATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR GCA 90 bp | GCATGTCCCCAATGCTCCAACACGATAGCAGCTGAAAGATGTCAGCTGCTCAAAGTGGGATCTGTGAGGTaGACCTCTGGGAAGCTGCTG | + |
Preference number: 2 (lower is better) Translates to: ACPQCSNTIAAERCQLLKVGSVR*TSGKLL Trigger: CAGCAGCTTCCCAGAGGTGCACCTCACAGATCCCAC...TTTGAGCAGCTGACATCTTTCAGCTGCTATCGTGTTGGAGCATTGGGGACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CATGGATCCCAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCGAGCAAGCAAATAAATaGCCACTCATACTAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: HGSQSSLTVHGGICEVHLEQANK*PLILES Trigger: GCTTTCTAGTATGAGTGGCCATTTATTTGCTTGCTC...GAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTGGGATCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR GCA 90 bp | CATGGATCCCAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCTCTTCCTTTTCTGTGTaGATCACATATTCCTATAGG | + |
Preference number: 2 (lower is better) Translates to: HGSQSSLTVHGGICEVHLSSFSV*ITYSYR Trigger: CCTATAGGAATATGTGATGCACACAGAAAAGGAAGA...GAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTGGGATCCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | GTGCTGAAGAATGTCCAGTTTACCAGAACAGGTCCTCAAGCTGCCTTTACTGCACTAGAAAGCCACTGGTaGTGGATGCATGCCACAGTG | + |
Preference number: 2 (lower is better) Translates to: VLKNVQFTRTGPQAAFTALESHW*WMHATV Trigger: CACTGTGGCATGCATCCACCACCAGTGGCTTTCTAG...TGCAGTAAAGGCAGCTTGAGGACCTGTTCTGGTAAACTGGACATTCTTCAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | TGTTACCAGGGAAATCTGTCAAAGACACAACTTCCTTGGGGTCTAGACATTGTCAGTGAAGTCAGCCCATaGATCCCAGAGCAGCCTCAC | + |
Preference number: 2 (lower is better) Translates to: CYQGNLSKTQLPWGLDIVSEVSP*IPEQPH Trigger: GTGAGGCTGCTCTGGGATCCATGGGCTGACTTCACT...GACAATGTCTAGACCCCAAGGAAGTTGTGTCTTTGACAGATTTCCCTGGTAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTGAAAGCCACTGGTGGTaGATGCATGCCACAGTGTAC | + |
Preference number: 2 (lower is better) Translates to: AEASSWSHYEVLIRGEMFESHWW*MHATVY Trigger: GTACACTGTGGCATGCATCCACCACCAGTGGCTTTC...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR GCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTCCCTGGAATCCCTTTTaGCTGTTCCCAACAGAAGAC | + |
Preference number: 2 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCPWNPF*LFPTED Trigger: GTCTTCTGTTGGGAACAGGCAAAAGGGATTCCAGGG...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCATACTAGAAAGCCACTaGTGGTGGATGCATGCCACA | + |
Preference number: 2 (lower is better) Translates to: LGRTQDARIIPKLSIPISILESH*WWMHAT Trigger: TGTGGCATGCATCCACCACCAGTGGCTTTCTAGTAT...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCCTTTCCCCAAGTTCCTaGAGCATCTACAGGAACACA | + |
Preference number: 2 (lower is better) Translates to: LGRTQDARIIPKLSIPISLSPSS*SIYRNT Trigger: TGTGTTCCTGTAGATGCTCCAGGAACTTGGGGAAAG...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR TCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCCTTGCAGGTTCATTGTaGCTGCCCTTGATCAATCTA | + |
Preference number: 2 (lower is better) Translates to: LGRTQDARIIPKLSIPISLAGSL*LPLINL Trigger: TAGATTGATCAAGGGCAGTCACAATGAACCTGCAAG...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR TCA 90 bp | CTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAATCTACCACCAGCCTTTaGGACTTACTGAGGTGTGAC | + |
Preference number: 2 (lower is better) Translates to: LTTPLRYTSKTYTHPLKESTTSL*DLLRCD Trigger: GTCACACCTCAGTAAGTCTCAAAGGCTGGTGGTAGA...TTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR-3UTR CCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTGAAAGCCACTGGTGGTaGATGCATGCCACAGTGTAC | + |
Preference number: 2 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSESHWW*MHATVY Trigger: GTACACTGTGGCATGCATCCACCACCAGTGGCTTTC...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | GGGAGAGCAGAAATTAATGGAACCCACCATTCCAAAAAGTACAGGCCAAGAGAAGCTGAGGCTTCCTCTTaGAGCCATTATGAAGTGCTT | + |
Preference number: 2 (lower is better) Translates to: GRAEINGTHHSKKYRPREAEASS*SHYEVL Trigger: AAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC...TTCTCTTGGCCTGTACTTTTTGGAATGGTGGGTTCCATTAATTTCTGCTCTCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | GCATGTCCCCAATGCTCCAACACGATAGCAGCTGAAAGATGTCAGCTGCTCAAACATTCACCTAGGTTTTaGCTAACCCATCATATCTCA | + |
Preference number: 2 (lower is better) Translates to: ACPQCSNTIAAERCQLLKHSPRF*LTHHIS Trigger: TGAGATATGATGGGTTAGCCAAAACCTAGGTGAATG...TTTGAGCAGCTGACATCTTTCAGCTGCTATCGTGTTGGAGCATTGGGGACATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR TCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCTTCAAAGGACTCTCATaGCCCAATTCTGGTCATTCA | + |
Preference number: 2 (lower is better) Translates to: LGRTQDARIIPKLSIPISFKGLS*PNSGHS Trigger: TGAATGACCAGAATTGGGTCATGAGAGTCCTTTGAA...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR TCA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAAGTGGATATATTCCCTaGGGAGGTGTAGAGAGCCTC | + |
Preference number: 2 (lower is better) Translates to: ALNYTRYVQCTHSCPARLSGYIP*GGVESL Trigger: GAGGCTCTCTACACCTCCTCAGGGAATATATCCACT...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR-3UTR TCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCAACACTTCAGCTGTCTaGTGTTCTTTGCCCATTTCA | + |
Preference number: 2 (lower is better) Translates to: LGRTQDARIIPKLSIPISNTSAV*CSLPIS Trigger: TGAAATGGGCAAAGAACATCAGACAGCTGAAGTGTT...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR-3UTR GCA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGACATGGGTAAAATGTTaGAGGGATTCTCAGAACCTT | + |
Preference number: 2 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVTWVKC*RDSQNL Trigger: AAGGTTCTGAGAATCCCTGCAACATTTTACCCATGT...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | TCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTGAAAGCCACTGGTGGTaGATGCATGCCACAGTGTAC | + |
Preference number: 2 (lower is better) Translates to: SHIPIGAQDFPLIKSHVAESHWW*MHATVY Trigger: GTACACTGTGGCATGCATCCACCACCAGTGGCTTTC...AGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 90 bp | ATTTCTCCCTTACTTTCCTTCTTAGACTCCTCCGAGTCACAGTCATaGCCCATACATTACTTGTTCCCTGCCCCCAAGAATAAAACTAAA | + |
Preference number: 2 (lower is better) Translates to: ISPLLSFLDSSESQS*PIHYLFPAPKNKTK Trigger: TTTAGTTTTATTCTTGGGGGCAGGGAACAAGTAATGTATGGGCAATGACTGTGACTCGGAGGAGTCTAAGAAGGAAAGTAAGGGAGAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CAATGCAGTTATCTCAATTCATTCATGAAGACTGAAGACTATAGGAATCCTCATCTAGAAAGCCACTGGTaGTGGATGCATGCCACAGTG | + |
Preference number: 2 (lower is better) Translates to: QCSYLNSFMKTEDYRNPHLESHW*WMHATV Trigger: CACTGTGGCATGCATCCACCACCAGTGGCTTTCTAG...ATGAGGATTCCTATAGTCTTCAGTCTTCATGAATGAATTGAGATAACTGCATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCAATACTAGAAAGCCACTaGTGGTGGATGCATGCCACA | + |
Preference number: 2 (lower is better) Translates to: LCASHIPIGAQDFPLIKSILESH*WWMHAT Trigger: TGTGGCATGCATCCACCACCAGTGGCTTTCTAGTAT...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | TCCTTTTCTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATATACTAGAAAGCCACTaGTGGTGGATGCATGCCACA | + |
Preference number: 2 (lower is better) Translates to: SFSVCITYSYRGSRFPFNILESH*WWMHAT Trigger: TGTGGCATGCATCCACCACCAGTGGCTTTCTAGTAT...ATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAGAAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CTTCCCAGGCATAATCTCTGCTACATAAGATTGTCTGTCATTCAACACCCAGCAGAGCAAGCAAATAAATaGCCACTCATACTAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: LPRHNLCYIRLSVIQHPAEQANK*PLILES Trigger: GCTTTCTAGTATGAGTGGCCATTTATTTGCTTGCTC...TGCTGGGTGTTGAATGACAGACAATCTTATGTAGCAGAGATTATGCCTGGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR-3UTR CCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCAGCTGAGGCTTCCTCTTaGAGCCATTATGAAGTGCTT | + |
Preference number: 2 (lower is better) Translates to: LCASHIPIGAQDFPLIKSAEASS*SHYEVL Trigger: AAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 90 bp | GTACTGACAAATAGAGAGATGTATCTTCAAGAGAGTGGTTGGACATaGAATCTGAGTATCAGAAGTGCCGCATGCATCGCTTTGAATAGA | + |
Preference number: 2 (lower is better) Translates to: VLTNREMYLQESGWT*NLSIRSAACIALNR Trigger: TCTATTCAAAGCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGAAGATACATCTCTCTATTTGTCAGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR-3UTR TCA 90 bp | CTTCCCAGGCATAATCTCTGCTACATAAGATTGTCTGTCATTCAACACCCAGCATTCCAGGGTATTAACTaGAATAGACTTTCTGTTTCC | + |
Preference number: 2 (lower is better) Translates to: LPRHNLCYIRLSVIQHPAFQGIN*NRLSVS Trigger: GGAAACAGAAAGTCTATTTCAGTTAATACCCTGGAA...TGCTGGGTGTTGAATGACAGACAATCTTATGTAGCAGAGATTATGCCTGGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR-3UTR GCA 90 bp | TTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGAGGCTTCCTACATGGGTAAAATGTTaGAGGGATTCTCAGAACCTT | + |
Preference number: 2 (lower is better) Translates to: LSTTSIKGATLKSLLRLPTWVKC*RDSQNL Trigger: AAGGTTCTGAGAATCCCTGCAACATTTTACCCATGT...AGGAAGCCTCAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR-3UTR TCA 90 bp | TCCTTTTCTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAGTGCTTATCAGAGGTaGAATGTTTACTCTCTAGGC | + |
Preference number: 2 (lower is better) Translates to: SFSVCITYSYRGSRFPFNSAYQR*NVYSLG Trigger: GCCTAGAGAGTAAACATTTCACCTCTGATAAGCACT...ATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAGAAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR-3UTR CCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTGAGCAAGCAAATAAATaGCCACTCATACTAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSEQANK*PLILES Trigger: GCTTTCTAGTATGAGTGGCCATTTATTTGCTTGCTC...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR-3UTR CCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGGCTGAGGCTTCCTCTTaGAGCCATTATGAAGTGCTT | + |
Preference number: 2 (lower is better) Translates to: FHFGLEKEVILSCTRETKAEASS*SHYEVL Trigger: AAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR-3UTR CCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGCATGGTCTTGACAACTaGGGGCATCTTCCTTTTCTG | + |
Preference number: 2 (lower is better) Translates to: FHFGLEKEVILSCTRETKHGLDN*GHLPFL Trigger: CAGAAAAGGAAGATGCCCCCAGTTGTCAAGACCATG...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR-3UTR CCA 90 bp | ACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAACAGAATCTTCAAGAGAGTGGTTaGACATTGAATCTGAGTATC | + |
Preference number: 2 (lower is better) Translates to: TPLRYTSKTYTHPLKEQNLQESG*TLNLSI Trigger: GATACTCAGATTCAATGTCCAACCACTCTCTTGAAG...ATTCTGTTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR-3UTR CCA 90 bp | CATTTTTCTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTGTATCTTCAAGAGAGTaGTTGGACATTGAATCTGAG | + |
Preference number: 2 (lower is better) Translates to: HFSDNSIEIYLQDIHSPTVSSRE*LDIESE Trigger: CTCAGATTCAATGTCCAACCACTCTCTTGAAGATAC...AGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAGAAAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR-3UTR TCA 90 bp | GTATTAACTGAAATAGACTTTCTGTTTCCCACAAGTCATGGGAAGCAAGAATTGAGTGCTTATCAGAGGTaGAATGTTTACTCTCTAGGC | + |
Preference number: 2 (lower is better) Translates to: VLTEIDFLFPTSHGKQELSAYQR*NVYSLG Trigger: GCCTAGAGAGTAAACATTTCACCTCTGATAAGCACT...CAATTCTTGCTTCCCATGACTTGTGGGAAACAGAAAGTCTATTTCAGTTAATAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR-3UTR GCA 90 bp | CTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAAGCAAGATTAATGTGTTaGTTTCTCACATTTCACATC | + |
Preference number: 2 (lower is better) Translates to: LTTPLRYTSKTYTHPLKEARLMC*FLTFHI Trigger: GATGTGAAATGTGAGAAAGCAACACATTAATCTTGC...TTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR CAA 90 bp | TCTGTCATTCAACACCCAGCAATAGGCATGTGGATTCCTTCTATTTaGTCTACTGTGGATACAAAAGTTGATACGAAATGTGATCTTCAT | + |
Preference number: 2 (lower is better) Translates to: SVIQHPAIGMWIPSI*STVDTKVDTKCDLH Trigger: ATGAAGATCACATTTCGTATCAACTTTTGTATCCACAGTAGACAAAATAGAAGGAATCCACATGCCTATTGCTGGGTGTTGAATGACAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR-3UTR GCA 90 bp | CATGAATACAAACACAGTAGATGGGATAATGTAAAACCCTCCACTAGAGTATTGGGAGCCATTATGAAGTaGTTATCAGAGGTGAAATGT | + |
Preference number: 2 (lower is better) Translates to: HEYKHSRWDNVKPSTRVLGAIMK*LSEVKC Trigger: ACATTTCACCTCTGATAAGCACTTCATAATGGCTCC...CAATACTCTAGTGGAGGGTTTTACATTATCCCATCTACTGTGTTTGTATTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR-3UTR CCA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTATTTTGTACCACTAATTaGCCTAAATATCAGAACGAG | + |
Preference number: 2 (lower is better) Translates to: ALNYTRYVQCTHSCPARLFCTTN*PKYQNE Trigger: CTCGTTCTGATATTTAGGCCAATTAGTGGTACAAAA...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR CAA 90 bp | TTATTGCACATCCACTTTCCATTTGTGGTTCTTGAACAGCATCTTTaGTTTGAGAGGATCACTCTTCATTTGGTAGCATATGAAAATTCT | + |
Preference number: 2 (lower is better) Translates to: LLHIHFPFVVLEQHL*FERITLHLVAYENS Trigger: AGAATTTTCATATGCTACCAAATGAAGAGTGATCCTCTCAAACAAAAGATGCTGTTCAAGAACCACAAATGGAAAGTGGATGTGCAATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR CCA 72 bp | CTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCTaGGAAGCTGCTGCCCTGGCCAGGTCATTCTCCACA | + |
Preference number: 3 (lower is better) Translates to: LTVHGGICEVHL*EAAALARSFST Trigger: TGTGGAGAATGACCTGGCCAGGGCAGCAGCTTCCCAGAGGTGCACCTCACAGATCCCACCATGCACAGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | GACTACAAAGGGGTCCATGTCTCAGGCACCTGCTCCTaGGACTCTGTGTTATTTCCAGGGTGCACAGCTCCA | + |
Preference number: 3 (lower is better) Translates to: DYKGVHVSGTCS*DSVLFPGCTAP Trigger: TGGAGCTGTGCACCCTGGAAATAACACAGAGTCCCAGGAGCAGGTGCCTGAGACATGGACCCCTTTGTAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | CACCTCTTCCAATCAGGCTCATACCTGAAATGTAAGTaGAGTCAGCCCATGGATCCCAGAGCAGCCTCACTG | + |
Preference number: 3 (lower is better) Translates to: HLFQSGSYLKCK*SQPMDPRAASL Trigger: CAGTGAGGCTGCTCTGGGATCCATGGGCTGACTTCACTTACATTTCAGGTATGAGCCTGATTGGAAGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | CAAGCACAGTCTAGTCTGAGCAACTTCTCAACAGCTTaGGTCATGAGTGCTCCAAGATCTTGCCCCCATGCC | + |
Preference number: 3 (lower is better) Translates to: QAQSSLSNFSTA*VMSAPRSCPHA Trigger: GGCATGGGGGCAAGATCTTGGAGCACTCATGACTCAAGCTGTTGAGAAGTTGCTCAGACTAGACTGTGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR GCA 72 bp | GCCACTCATACTAGAAAGCCACTGGTGGTGGATGCATaGCACAGTGTACGCAGGAGACAGAATTCTGCTAGT | + |
Preference number: 3 (lower is better) Translates to: ATHTRKPLVVDA*HSVRRRQNSAS Trigger: ACTAGCAGAATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR GCA 72 bp | GAAGAATGTCCAGTTTACCAGAACAGGTCCTCAAGCTaGCTTTACTGCAAGCCCCAGGGGCAGAAGACTATT | + |
Preference number: 3 (lower is better) Translates to: EECPVYQNRSSS*LYCKPQGQKTI Trigger: AATAGTCTTCTGCCCCTGGGGCTTGCAGTAAAGGCAGCTTGAGGACCTGTTCTGGTAAACTGGACATTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | GTGCATCAGAAGCCTGTAGTAATCCATCCAACACAATaGGGCATCTGTGCCTCTCCCCGAAAAACAAGAACT | + |
Preference number: 3 (lower is better) Translates to: VHQKPVVIHPTQ*GICASPRKTRT Trigger: AGTTCTTGTTTTTCGGGGAGAGGCACAGATGCCCCATTGTGTTGGATGGATTACTACAGGCTTCTGATGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | GTATCTGATGTCACCTCTTCCAATCAGGCTCATACCTaGAATGTAAGTGAAGTCAGCCCATGGATCCCAGAG | + |
Preference number: 3 (lower is better) Translates to: VSDVTSSNQAHT*NVSEVSPWIPE Trigger: CTCTGGGATCCATGGGCTGACTTCACTTACATTTCAGGTATGAGCCTGATTGGAAGAGGTGACATCAGATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | TCTAGCATGTCCCCAATGCTCCAACACGATAGCAGCTaGAAGATGTCAGCTGCTCAAAATTGGCACTTCAGT | + |
Preference number: 3 (lower is better) Translates to: SSMSPMLQHDSS*KMSAAQNWHFS Trigger: ACTGAAGTGCCAATTTTGAGCAGCTGACATCTTTCAGCTGCTATCGTGTTGGAGCATTGGGGACATGCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR-3UTR CAA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTGCCCTGGAATCCCTTTaGCCTGTTCCCAACAGAAGA | + |
Preference number: 3 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSALESL*PVPNRR Trigger: TCTTCTGTTGGGAACAGGCAAAAGGGATTCCAGGGC...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR-3UTR CAA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTGCCCTGGAATCCCTTTaGCCTGTTCCCAACAGAAGA | + |
Preference number: 3 (lower is better) Translates to: QDFPLIKSHVAIGMQAGAALESL*PVPNRR Trigger: TCTTCTGTTGGGAACAGGCAAAAGGGATTCCAGGGC...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR-3UTR CAA 90 bp | CTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAACTGATTTCCCTATGTTaGCAGAGTTCTACCACCAGC | + |
Preference number: 3 (lower is better) Translates to: LTTPLRYTSKTYTHPLKELISLC*QSSTTS Trigger: GCTGGTGGTAGAACTCTGCAAACATAGGGAAATCAG...TTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR TCA 72 bp | TACACGTGTGTTTCATTAAACAAAGCAAAGCGGCGATaGAACGGGGTCACATCAATAGCAGTGTGCATCAGA | + |
Preference number: 3 (lower is better) Translates to: YTCVSLNKAKRR*NGVTSIAVCIR Trigger: TCTGATGCACACTGCTATTGATGTGACCCCGTTTCATCGCCGCTTTGCTTTGTTTAATGAAACACACGTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | TTAGTTGTACTAGAGAGACCAAGACCCCAGAGGTCTTaGGTGGCTGTGGATAGAGTAAGTCTTCCTTTTTAT | + |
Preference number: 3 (lower is better) Translates to: LVVLERPRPQRS*VAVDRVSLPFY Trigger: ATAAAAAGGAAGACTTACTCTATCCACAGCCACCCAAGACCTCTGGGGTCTTGGTCTCTCTAGTACAACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | GGATCAACCTCCAAAGACCTGTACCAAAGAGAGTCATaGTTGCCTTATGTGCTACTGTATGACTCTATTTGC | + |
Preference number: 3 (lower is better) Translates to: GSTSKDLYQRES*LPYVLLYDSIC Trigger: GCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGGTACAGGTCTTTGGAGGTTGATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR-3UTR CAA 90 bp | GTATTAACTGAAATAGACTTTCTGTTTCCCACAAGTCATGGGAAGCAAGAATTGGCCCTGGAATCCCTTTaGCCTGTTCCCAACAGAAGA | + |
Preference number: 3 (lower is better) Translates to: VLTEIDFLFPTSHGKQELALESL*PVPNRR Trigger: TCTTCTGTTGGGAACAGGCAAAAGGGATTCCAGGGC...CAATTCTTGCTTCCCATGACTTGTGGGAAACAGAAAGTCTATTTCAGTTAATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | CAAGGGGCAACCTTTATGTATCTGGCAGAGACGTACTaGCAAATAGAGAGATGTATCTTCAAGAGAGTGGTT | + |
Preference number: 3 (lower is better) Translates to: QGATFMYLAETY*QIERCIFKRVV Trigger: AACCACTCTCTTGAAGATACATCTCTCTATTTGTCAGTACGTCTCTGCCAGATACATAAAGGTTGCCCCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR TCA 72 bp | CCCTACCCACCTCATGCTGACTCTTTGAGTAGATTGTaGCATTCAAATTTTAAATTACCTCCAGGTGAGGGT | + |
Preference number: 3 (lower is better) Translates to: PYPPHADSLSRL*HSNFKLPPGEG Trigger: ACCCTCACCTGGAGGTAATTTAAAATTTGAATGTCACAATCTACTCAAAGAGTCAGCATGAGGTGGGTAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR GCA 72 bp | TCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTaGTTATCAGAGGTGAAATGTTTACTCTCTAGGCTT | + |
Preference number: 3 (lower is better) Translates to: SLLRLPLGAIMK*LSEVKCLLSRL Trigger: AAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR GCA 72 bp | AGACCCCATGCTAGATTTTTCTTTGGATTTCACTGTTaGCGCTACTCTCTTCCTTGGAACTCAAATTGCCAT | + |
Preference number: 3 (lower is better) Translates to: RPHARFFFGFHC*RYSLPWNSNCH Trigger: ATGGCAATTTGAGTTCCAAGGAAGAGAGTAGCGGCAACAGTGAAATCCAAAGAAAAATCTAGCATGGGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR GCA 72 bp | CAACCTCCAAAGACCTGTACCAAAGAGAGTCATGGTTaGCTTATGTGCTACTGTATGACTCTATTTGCCTTT | + |
Preference number: 3 (lower is better) Translates to: QPPKTCTKESHG*LMCYCMTLFAF Trigger: AAAGGCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGGTACAGGTCTTTGGAGGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | ACAGGCCAAGAGAAGCCTAGCCATTCACCTAGGTTTTaGCTAACCCATCATATCTCAATGGAGTTCAAATTA | + |
Preference number: 3 (lower is better) Translates to: TGQEKPSHSPRF*LTHHISMEFKL Trigger: TAATTTGAACTCCATTGAGATATGATGGGTTAGCCAAAACCTAGGTGAATGGCTAGGCTTCTCTTGGCCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | CTGACAAATAGAGAGATGTATCTTCAAGAGAGTGGTTaGACATTGAATCTGAGTATCAGAAGTGCCGCATGC | + |
Preference number: 3 (lower is better) Translates to: LTNREMYLQESG*TLNLSIRSAAC Trigger: GCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGAAGATACATCTCTCTATTTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR CCA 72 bp | TGTTACCAGGGAAATCTGTCAAAGACACAACTTCCTTaGGGTCTAGACATTGTCACCTACATTGATAGCATC | + |
Preference number: 3 (lower is better) Translates to: CYQGNLSKTQLP*GLDIVTYIDSI Trigger: GATGCTATCAATGTAGGTGACAATGTCTAGACCCCAAGGAAGTTGTGTCTTTGACAGATTTCCCTGGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | AGTCGCTTATTTGTTCAGCCCCAAAGGCATAAGATATaGCATGGAAAGTCATATCTCCAATGTTACCAGGGA | + |
Preference number: 3 (lower is better) Translates to: SRLFVQPQRHKI*HGKSYLQCYQG Trigger: TCCCTGGTAACATTGGAGATATGACTTTCCATGCCATATCTTATGCCTTTGGGGCTGAACAAATAAGCGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR-3UTR CAA 90 bp | TCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTGCCACTTTGAAGTCTTaGCTGAGGCTTCCTCTTGGA | + |
Preference number: 3 (lower is better) Translates to: SHIPIGAQDFPLIKSHVAATLKS*LRLPLG Trigger: TCCAAGAGGAAGCCTCAGCAAAGACTTCAAAGTGGC...AGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | CTATACACCTCCATCAACCAGAGGAAAGAACCCCAATaGCACAATTCCTTCTATCTTTCCTTCTGGTTCTAT | + |
Preference number: 3 (lower is better) Translates to: LYTSINQRKEPQ*HNSFYLSFWFY Trigger: ATAGAACCAGAAGGAAAGATAGAAGGAATTGTGTCATTGGGGTTCTTTCCTCTGGTTGATGGAGGTGTATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR TCA 72 bp | CCAAAGAGAGTCATGGTTGCCTTATGTGCTACTGTATaGCTCTATTTGCCTTTAAAAGACTTAGGTTCCCTA | + |
Preference number: 3 (lower is better) Translates to: PKRVMVALCATV*LYLPLKDLGSL Trigger: TAGGGAACCTAAGTCTTTTAAAGGCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | CGTTGTTTGTACGCTGTGAAGGAAAATAAACTGGCGTaGTGTCACTTATTAATTCAAGTCTCGACGACCAAT | + |
Preference number: 3 (lower is better) Translates to: RCLYAVKENKLA*CHLLIQVSTTN Trigger: ATTGGTCGTCGAGACTTGAATTAATAAGTGACATCACGCCAGTTTATTTTCCTTCACAGCGTACAAACAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | TGCCACATATGCAACCCAGAGCAGTATTTAAGCACGTaGTTTAGTTTTCTCAGACTAACTCTACTGGATTTT | + |
Preference number: 3 (lower is better) Translates to: CHICNPEQYLST*FSFLRLTLLDF Trigger: AAAATCCAGTAGAGTTAGTCTGAGAAAACTAAACCACGTGCTTAAATACTGCTCTGGGTTGCATATGTGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR TCA 72 bp | CTCATGAAGGAGACTAATTCATTCCAGGGTATTAACTaGAATAGACTTTCTGTTTCCCACAAGTCATGGGAA | + |
Preference number: 3 (lower is better) Translates to: LMKETNSFQGIN*NRLSVSHKSWE Trigger: TTCCCATGACTTGTGGGAAACAGAAAGTCTATTTCAGTTAATACCCTGGAATGAATTAGTCTCCTTCATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | TTCCCATATCTCCCTACCCACCTCATGCTGACTCTTTaGGTAGATTGTGACATTCAAATTTTAAATTACCTC | + |
Preference number: 3 (lower is better) Translates to: FPYLPTHLMLTL*VDCDIQILNYL Trigger: GAGGTAATTTAAAATTTGAATGTCACAATCTACTCAAAGAGTCAGCATGAGGTGGGTAGGGAGATATGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | CCCATCATATCTCAATGGAGTTCAAATTATAGATCATaGAGTCCGGGATGGAAACTGAACTTTCATTTTGGT | + |
Preference number: 3 (lower is better) Translates to: PIISQWSSNYRS*SPGWKLNFHFG Trigger: ACCAAAATGAAAGTTCAGTTTCCATCCCGGACTTCATGATCTATAATTTGAACTCCATTGAGATATGATGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
3UTR TCA 72 bp | GTGTCACTAATCAAAACACCTTTATTCACACTGCCCTaGATTACACAAGATACGTTCAATGTACTCATTCCT | + |
Preference number: 3 (lower is better) Translates to: VSLIKTPLFTLP*ITQDTFNVLIP Trigger: AGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGCAGTGTGAATAAAGGTGTTTTGATTAGTGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
3UTR-3UTR CAA 90 bp | CATGAATACAAACACAGTAGATGGGATAATGTAAAACCCTCCACTAGAGTATTGCTGTGGATACAAAAGTaGATACGAAATGTGATCTTC | + |
Preference number: 3 (lower is better) Translates to: HEYKHSRWDNVKPSTRVLLWIQK*IRNVIF Trigger: GAAGATCACATTTCGTATCAACTTTTGTATCCACAG...CAATACTCTAGTGGAGGGTTTTACATTATCCCATCTACTGTGTTTGTATTCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR GCA 72 bp | AAAAGATGGATATTTGGGACCACAGTTAAATGTGTTTaGTCCATTTGCAAGAGAGTAAATTTTCATGGAGTT | + |
Preference number: 3 (lower is better) Translates to: KRWIFGTTVKCV*SICKRVNFHGV Trigger: AACTCCATGAAAATTTACTCTCTTGCAAATGGAGCAAACACATTTAACTGTGGTCCCAAATATCCATCTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR CCA 72 bp | ATACAAAATACTTATTGCACATCCACTTTCCATTTGTaGTTCTTGAACAGCATCTTTTGTTTGAGAGGATCA | + |
Preference number: 3 (lower is better) Translates to: IQNTYCTSTFHL*FLNSIFCLRGS Trigger: TGATCCTCTCAAACAAAAGATGCTGTTCAAGAACCACAAATGGAAAGTGGATGTGCAATAAGTATTTTGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
CDS-3UTR TCA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGACGACTGGCTGGGGCATaGAGGCGGTGGGCATCCAAC | + |
Preference number: 4 (lower is better) Translates to: PLILESHWWWMHATVYAGRLAGA*RRWASN Trigger: GTTGGATGCCCACCGCCTTCATGCCCCAGCCAGTCG...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTTTCGGGGAGCCTGGGAGCTCCAGCTGGGTCTGGCTaGGCTCCTCTGGGGGCACTC | + |
Preference number: 4 (lower is better) Translates to: TWVKCCRDSQNLSGSLGAPAGSG*APLGAL Trigger: GAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGG...AGCTCCCAGGCTCCCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR GCA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGCTAGGCGGCGATGCTaGTGCTGCAGAGTCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: PLILESHWWWMHATVYAGARRRC*CCRVRP Trigger: TGGCCTGACTCTGCAGCAGCAGCATCGCCGCCTAGC...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR CCA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGCACGGCGTAGGCGCTaGGCTCGTTCTCCAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: PLILESHWWWMHATVYAGARRRR*ARSPGS Trigger: ACTACCTGGAGAACGAGCCCAGCGCCTACGCCGTGC...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR GCA 90 bp | CACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTCTGCTAGTCCCACTTCGTAACACTTaGGCAGCCGACAGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: HWWWMHATVYAGDRILLVPLRNT*AADRPG Trigger: GCCAGGCCTGTCGGCTGCGCAAGTGTTACGAAGTGG...GACTAGCAGAATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR TCA 90 bp | CATGGATCCCAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCGGATATGGGAAAGAATaGGAAGGAGCTGAGCTAGGC | + |
Preference number: 4 (lower is better) Translates to: HGSQSSLTVHGGICEVHLGYGKE*EGAELG Trigger: GCCTAGCTCAGCTCCTTCTCATTCTTTCCCATATCC...GAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTGGGATCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
||
CDS-3UTR GCA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCAGGAAAGGAGACAGCTaGGGCGGCGGGTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: SREWLDIESEYQKCRMHRRKGDS*GGGCSS Trigger: GCTGCTGCACCCGCCGCCGCAGCTGTCTCCTTTCCT...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
CDS-3UTR CCA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGCCAGCTGGGTCTGGCTaGGCTCCTCTGGGGGCACTC | + |
Preference number: 4 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVPAGSG*APLGAL Trigger: GAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGG...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR TCA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGCGACTGGCTGGGGCATaGAGGCGGTGGGCATCCAAC | + |
Preference number: 4 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVRLAGA*RRWASN Trigger: GTTGGATGCCCACCGCCTTCATGCCCCAGCCAGTCG...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | GTGCTGAAGAATGTCCAGTTTACCAGAACAGGTCCTCAAGCTGCCTTTACTGCAGCTAGGCGGCGATGCTaGTGCTGCAGAGTCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: VLKNVQFTRTGPQAAFTAARRRC*CCRVRP Trigger: TGGCCTGACTCTGCAGCAGCAGCATCGCCGCCTAGC...TGCAGTAAAGGCAGCTTGAGGACCTGTTCTGGTAAACTGGACATTCTTCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTGCTGAAGAATGTCCAGTTTACCAGAACAGGTCCTCAAGCTGCCTTTACTGCAGCACGGCGTAGGCGCTaGGCTCGTTCTCCAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: VLKNVQFTRTGPQAAFTAARRRR*ARSPGS Trigger: ACTACCTGGAGAACGAGCCCAGCGCCTACGCCGTGC...TGCAGTAAAGGCAGCTTGAGGACCTGTTCTGGTAAACTGGACATTCTTCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CCCATGCCTTTCCCCAAGTTCCTGGAGCATCTACAGGAACACAGGTATCTGATGCATGCGGAACCGACTTaGCGTAGCCAGCAACATGTC | + |
Preference number: 4 (lower is better) Translates to: PMPFPKFLEHLQEHRYLMHAEPT*RSQQHV Trigger: GACATGTTGCTGGCTACGTCAAGTCGGTTCCGCATG...CATCAGATACCTGTGTTCCTGTAGATGCTCCAGGAACTTGGGGAAAGGCATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTTTCGGGCGACTGGCTGGGGCATaGAGGCGGTGGGCATCCAAC | + |
Preference number: 4 (lower is better) Translates to: LVIHDMGKMLQGFSEPFGRLAGA*RRWASN Trigger: GTTGGATGCCCACCGCCTTCATGCCCCAGCCAGTCG...CCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCATGTCCCCAATGCTCCAACACGATAGCAGCTGAAAGATGTCAGCTGCTCAAAGGCTTGGCCAAAGGTTaGCAGCCCTCATGTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: ACPQCSNTIAAERCQLLKGLAKG*QPSCLL Trigger: CAGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCC...TTTGAGCAGCTGACATCTTTCAGCTGCTATCGTGTTGGAGCATTGGGGACATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCTCCCCGGGTGTTCCATaGAGCGCCAGACGAGACCAA | + |
Preference number: 4 (lower is better) Translates to: SREWLDIESEYQKCRMHRSPGVP*SARRDQ Trigger: TTGGTCTCGTCTGGCGCTCCATGGAACACCCGGGGA...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | CACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTCTGCTAGTCGAGTCAGGCCAGCTTTaGCCATCAGGTGGATCAAAG | + |
Preference number: 4 (lower is better) Translates to: HWWWMHATVYAGDRILLVESGQL*PSGGSK Trigger: CTTTGATCCACCTGATGGCCAAAGCTGGCCTGACTC...GACTAGCAGAATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 72 bp | CTTCTCAACAGCTTGAGTCATGAGTGCTCCAAGATCTaGCCCCCATGCCTTTCCCCAAGTTCCTGGAGCATC | + |
Preference number: 4 (lower is better) Translates to: LLNSLSHECSKI*PPCLSPSSWSI Trigger: GATGCTCCAGGAACTTGGGGAAAGGCATGGGGGCAAGATCTTGGAGCACTCATGACTCAAGCTGTTGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGATCGAGAAGGTGGACCTaGTCATGGAGATTCAAGTCC | + |
Preference number: 4 (lower is better) Translates to: PLILESHWWWMHATVYAGSRRWT*SWRFKS Trigger: GGACTTGAATCTCCATGATCAGGTCCACCTTCTCGA...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | GGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGAGGAAAGGAGACAGCTaGGGCGGCGGGTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: GSRFPFNKVTCCYRNASGRKGDS*GGGCSS Trigger: GCTGCTGCACCCGCCGCCGCAGCTGTCTCCTTTCCT...CCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTAGGCGGCGATGCTGCTaGTGCAGAGTCAGGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCRRRCC*CRVRPA Trigger: AGCTGGCCTGACTCTGCAGCAGCAGCATCGCCGCCT...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CATGGATCCCAGAGCAGCCTCACTGTGCATGGTGGGATCTGTGAGGTGCACCTCATTCAGAATAGATCATaGGCGGTTCAGCATCCAACA | + |
Preference number: 4 (lower is better) Translates to: HGSQSSLTVHGGICEVHLIQNRS*AVQHPT Trigger: TGTTGGATGCTGAACCGCCCATGATCTATTCTGAAT...GAGGTGCACCTCACAGATCCCACCATGCACAGTGAGGCTGCTCTGGGATCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTTTCGGGGAGCCTGGGAGCTCAAGTCCCCAAAGCCTaGCACTCTCTTTGCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: TWVKCCRDSQNLSGSLGAQVPKA*HSLCPV Trigger: AACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTG...AGCTCCCAGGCTCCCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGTCCCATGCGACTGGCTaGGGCATGAAGGCGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: EIALSTTSIKGATLKSLLSHATG*GMKAVG Trigger: GCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGA...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTCCAGCTGGGTCTGGCTaGGCTCCTCTGGGGGCACTC | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGAPAGSG*APLGAL Trigger: GAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGG...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTAAGTGGAGCTGGTGGTaGCCAGCTGGGTCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: VAKGERELLPRFSPGIPFKWSWW*PAGSGW Trigger: CCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTT...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTCTGAAGTGGAGCTGGTaGTGGCCAGCTGGGTCTGGC | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCLKWSW*WPAGSG Trigger: GCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAG...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAGTGCTGAAGTGGAGCTaGTGGTGGCCAGCTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: VFAEASSWSHYEVLIRGEVLKWS*WWPAGS Trigger: AGACCCAGCTGGCCACCACCAGCTCCACTTCAGCAC...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCGTGCTGAAGTGGAGCTaGTGGTGGCCAGCTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: LGRTQDARIIPKLSIPISVLKWS*WWPAGS Trigger: AGACCCAGCTGGCCACCACCAGCTCCACTTCAGCAC...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTCTCTCTTTGCCCAGTTaGTCATATGAACCAGCTCCC | + |
Preference number: 4 (lower is better) Translates to: LESHWWWMHATVYAGDRILSLPS*SYEPAP Trigger: GGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAG...AATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTGGATATGGGAAAGAATaGGAAGGAGCTGAGCTAGGC | + |
Preference number: 4 (lower is better) Translates to: LESHWWWMHATVYAGDRIGYGKE*EGAELG Trigger: GCCTAGCTCAGCTCCTTCTCATTCTTTCCCATATCC...AATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTCCACTTCGTAACACTTaGGCAGCCGACAGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: AEASSWSHYEVLIRGEMFPLRNT*AADRPG Trigger: GCCAGGCCTGTCGGCTGCGCAAGTGTTACGAAGTGG...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAATCCAGCTCGTTCCCTTaGATCTGGTGCAGCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: VFAEASSWSHYEVLIRGESSSFP*IWCSKA Trigger: GGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGA...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTTCCCCGGGTGTTCCATaGAGCGCCAGACGAGACCAA | + |
Preference number: 4 (lower is better) Translates to: VAKGERELLPRFSPGIPFSPGVP*SARRDQ Trigger: TTGGTCTCGTCTGGCGCTCCATGGAACACCCGGGGA...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTCTGCTAGTCCTCATGTGCCGGATATaGGAAAGAATGAGAAGGAGC | + |
Preference number: 4 (lower is better) Translates to: HWWWMHATVYAGDRILLVLMCRI*ERMRRS Trigger: GCTCCTTCTCATTCTTTCCCATATCCGGCACATGAG...GACTAGCAGAATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | AGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCCTGGTGGTGGCCAGCTaGGTCTGGCTGGGCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: RGSRFPFNKVTCCYRNASLVVAS*VWLGSS Trigger: AGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAG...GCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATTCTGCTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTCTGGTGGTGGCCAGCTaGGTCTGGCTGGGCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: ILLVIHDMGKMLQGFSEPLVVAS*VWLGSS Trigger: AGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAG...AGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAGCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTGTGCTGAAGTGGAGCTaGTGGTGGCCAGCTGGGTCT | + |
Preference number: 4 (lower is better) Translates to: VAKGERELLPRFSPGIPFVLKWS*WWPAGS Trigger: AGACCCAGCTGGCCACCACCAGCTCCACTTCAGCAC...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGCGCCCTCGGGGTAGTTaGACACAGTGGGCTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: EIALSTTSIKGATLKSLLRPRGS*TQWACC Trigger: ACAGCAAGCCCACTGTGTTCAACTACCCCGAGGGCG...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTTCCCAGGCATAATCTCTGCTACATAAGATTGTCTGTCATTCAACACCCAGCAAGAATGAGAAGGAGCTaGGCTAGGCGGCGATGCTGC | + |
Preference number: 4 (lower is better) Translates to: LPRHNLCYIRLSVIQHPARMRRS*ARRRCC Trigger: GCAGCATCGCCGCCTAGCTCAGCTCCTTCTCATTCT...TGCTGGGTGTTGAATGACAGACAATCTTATGTAGCAGAGATTATGCCTGGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | TCCTTTTCTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAGGAAAGGAGACAGCTaGGGCGGCGGGTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: SFSVCITYSYRGSRFPFNRKGDS*GGGCSS Trigger: GCTGCTGCACCCGCCGCCGCAGCTGTCTCCTTTCCT...ATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAGAAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR GCA 90 bp | CCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGGGCACCTGCTGGCCGTaGGGGTGCAGGAAAGGAGAC | + |
Preference number: 4 (lower is better) Translates to: PIGAQDFPLIKSHVAIGMGTCWP*GCRKGD Trigger: GTCTCCTTTCCTGCACCCGCACGGCCAGCAGGTGCC...CATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | CTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAACCACTTCGTAACACTTaGGCAGCCGACAGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: LTTPLRYTSKTYTHPLKEPLRNT*AADRPG Trigger: GCCAGGCCTGTCGGCTGCGCAAGTGTTACGAAGTGG...TTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR GCA 90 bp | CTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTACAAACTCTTCTCCCTaGAGGTTCATCATGCGGAAC | + |
Preference number: 4 (lower is better) Translates to: LESHWWWMHATVYAGDRITNSSP*RFIMRN Trigger: GTTCCGCATGATGAACCTGCAGGGAGAAGAGTTTGT...AATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | TGTTTACTCTCTAGGCTTGGGTCTCAACAAGTAGCTTCAATGCAGTTATCTCAAAGGCGGCGATGCTGCTaGTGCAGAGTCAGGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: CLLSRLGSQQVASMQLSQRRRCC*CRVRPA Trigger: AGCTGGCCTGACTCTGCAGCAGCAGCATCGCCGCCT...TTGAGATAACTGCATTGAAGCTACTTGTTGAGACCCAAGCCTAGAGAGTAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCTCCATTCCCGAGGCTTTaGTGTGAAGGGTCATGGTCA | + |
Preference number: 4 (lower is better) Translates to: QESGWTLNLSIRSAACIAPFPRL*CEGSWS Trigger: TGACCATGACCCTTCACACCAAAGCCTCGGGAATGG...AGCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTCCAGCTCGTTCCCTTaGATCTGGTGCAGCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCSSSFP*IWCSKA Trigger: GGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGA...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAGCACGGCGTAGGCGCTaGGCTCGTTCTCCAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: ALNYTRYVQCTHSCPARLARRRR*ARSPGS Trigger: ACTACCTGGAGAACGAGCCCAGCGCCTACGCCGTGC...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTGGCTTGGCCAAAGGTTaGCAGCCCTCATGTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: AEASSWSHYEVLIRGEMFGLAKG*QPSCLL Trigger: CAGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCC...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGTCCCATGCGACTGGCTaGGGCATGAAGGCGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: PIGAQDFPLIKSHVAIGMSHATG*GMKAVG Trigger: GCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGA...CATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCCATGGCAGGCTCTCTTaGCCTTGGTTAGAGAGTGCA | + |
Preference number: 4 (lower is better) Translates to: SREWLDIESEYQKCRMHRHGRLS*PWLESA Trigger: TGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATG...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR GCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTCCACTTCGTAACACTTaGGCAGCCGACAGGCCTGGC | + |
Preference number: 4 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSPLRNT*AADRPG Trigger: GCCAGGCCTGTCGGCTGCGCAAGTGTTACGAAGTGG...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAACCATTCCCGAGGCTTTaGTGTGAAGGGTCATGGTCA | + |
Preference number: 4 (lower is better) Translates to: VFAEASSWSHYEVLIRGEPFPRL*CEGSWS Trigger: TGACCATGACCCTTCACACCAAAGCCTCGGGAATGG...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GGGAGAGCAGAAATTAATGGAACCCACCATTCCAAAAAGTACAGGCCAAGAGAATCGTTCCCTTGGATCTaGTGCAGCAAGGCCATTCCC | + |
Preference number: 4 (lower is better) Translates to: GRAEINGTHHSKKYRPRESFPWI*CSKAIP Trigger: GGGAATGGCCTTGCTGCACCAGATCCAAGGGAACGA...TTCTCTTGGCCTGTACTTTTTGGAATGGTGGGTTCCATTAATTTCTGCTCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAAGCACGGCGTAGGCGCTaGGCTCGTTCTCCAGGTAGT | + |
Preference number: 4 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQARRRR*ARSPGS Trigger: ACTACCTGGAGAACGAGCCCAGCGCCTACGCCGTGC...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGATTGTCAATGGTGCATTaGTTTGTAGCTGGACACATG | + |
Preference number: 4 (lower is better) Translates to: PLILESHWWWMHATVYAGLSMVH*FVAGHM Trigger: CATGTGTCCAGCTACAAACCAATGCACCATTGACAA...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAACAAGTCCCCAAAGCCTaGCACTCTCTTTGCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: VFAEASSWSHYEVLIRGEQVPKA*HSLCPV Trigger: AACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTG...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTTCCCCGGGTGTTCCATaGAGCGCCAGACGAGACCAA | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGASPGVP*SARRDQ Trigger: TTGGTCTCGTCTGGCGCTCCATGGAACACCCGGGGA...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAGGACACGGTGGATGTaGTCCTTCTCTTCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVRTRWM*SFSSRD Trigger: GTCTCTGGAAGAGAAGGACCACATCCACCGTGTCCT...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCATGTCCCCAATGCTCCAACACGATAGCAGCTGAAAGATGTCAGCTGCTCAAACTCATGTGCCGGATATaGGAAAGAATGAGAAGGAGC | + |
Preference number: 4 (lower is better) Translates to: ACPQCSNTIAAERCQLLKLMCRI*ERMRRS Trigger: GCTCCTTCTCATTCTTTCCCATATCCGGCACATGAG...TTTGAGCAGCTGACATCTTTCAGCTGCTATCGTGTTGGAGCATTGGGGACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TCCTTTTCTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATCTGAAGTGGAGCTGGTaGTGGCCAGCTGGGTCTGGC | + |
Preference number: 4 (lower is better) Translates to: SFSVCITYSYRGSRFPFNLKWSW*WPAGSG Trigger: GCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAG...ATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAGAAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTGGGGCGTACTCAGGATGCCAGGATAATTCCTAAACTCTCTATTCCTATTTCCGCCCAGTTGATCATATaGACCAGCTCCCTATCTGCT | + |
Preference number: 4 (lower is better) Translates to: LGRTQDARIIPKLSIPISAQLII*TSSLSA Trigger: AGCAGATAGGGAGCTGGTTCATATGATCAACTGGGC...GGAAATAGGAATAGAGAGTTTAGGAATTATCCTGGCATCCTGAGTACGCCCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAACTCTCTTTGCCCAGTTaGTCATATGAACCAGCTCCC | + |
Preference number: 4 (lower is better) Translates to: VFAEASSWSHYEVLIRGELSLPS*SYEPAP Trigger: GGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAG...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGAGGAAAGGAGACAGCTaGGGCGGCGGGTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: FHFGLEKEVILSCTRETKRKGDS*GGGCSS Trigger: GCTGCTGCACCCGCCGCCGCAGCTGTCTCCTTTCCT...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | GTGCTGAAGAATGTCCAGTTTACCAGAACAGGTCCTCAAGCTGCCTTTACTGCAACAAACTCTTCTCCCTaGAGGTTCATCATGCGGAAC | + |
Preference number: 4 (lower is better) Translates to: VLKNVQFTRTGPQAAFTATNSSP*RFIMRN Trigger: GTTCCGCATGATGAACCTGCAGGGAGAAGAGTTTGT...TGCAGTAAAGGCAGCTTGAGGACCTGTTCTGGTAAACTGGACATTCTTCAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | ATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCAGGCGGCGATGCTGCTaGTGCAGAGTCAGGCCAGCT | + |
Preference number: 4 (lower is better) Translates to: ITYSYRGSRFPFNKVTCCRRRCC*CRVRPA Trigger: AGCTGGCCTGACTCTGCAGCAGCAGCATCGCCGCCT...GCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTTCCAGCTCGTTCCCTTaGATCTGGTGCAGCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSSSSFP*IWCSKA Trigger: GGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGA...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CATTTTTCTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTCCAGCTCGTTCCCTTaGATCTGGTGCAGCAAGGCC | + |
Preference number: 4 (lower is better) Translates to: HFSDNSIEIYLQDIHSPTSSSFP*IWCSKA Trigger: GGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGA...AGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAGAAAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTGGCTTGGCCAAAGGTTaGCAGCCCTCATGTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSGLAKG*QPSCLL Trigger: CAGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCC...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CATTTTTCTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTGGCTTGGCCAAAGGTTaGCAGCCCTCATGTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: HFSDNSIEIYLQDIHSPTGLAKG*QPSCLL Trigger: CAGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCC...AGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAGAAAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTAATCACAAGAGGGCTTaGCCAAAGGTTGGCAGCCCT | + |
Preference number: 4 (lower is better) Translates to: VAKGERELLPRFSPGIPFNHKRA*PKVGSP Trigger: AGGGCTGCCAACCTTTGGCCAAGCCCTCTTGTGATT...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTCAAGTCCCCAAAGCCTaGCACTCTCTTTGCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: VAKGERELLPRFSPGIPFQVPKA*HSLCPV Trigger: AACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTG...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTTTCGGGTTGTCCAGGACACGGTaGATGTGGTCCTTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: LVIHDMGKMLQGFSEPFGLSRTR*MWSFSS Trigger: GGAAGAGAAGGACCACATCCACCGTGTCCTGGACAA...CCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTTTGTCCAGGACACGGTaGATGTGGTCCTTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: AEASSWSHYEVLIRGEMFLSRTR*MWSFSS Trigger: GGAAGAGAAGGACCACATCCACCGTGTCCTGGACAA...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTGAGTCAGGCCAGCTTTaGCCATCAGGTGGATCAAAG | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCESGQL*PSGGSK Trigger: CTTTGATCCACCTGATGGCCAAAGCTGGCCTGACTC...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGTCCCATGCGACTGGCTaGGGCATGAAGGCGGTGGGC | + |
Preference number: 4 (lower is better) Translates to: FHFGLEKEVILSCTRETKSHATG*GMKAVG Trigger: GCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGA...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CAATGCAGTTATCTCAATTCATTCATGAAGACTGAAGACTATAGGAATCCTCATCTGGTGGTGGCCAGCTaGGTCTGGCTGGGCTCCTCT | + |
Preference number: 4 (lower is better) Translates to: QCSYLNSFMKTEDYRNPHLVVAS*VWLGSS Trigger: AGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAG...ATGAGGATTCCTATAGTCTTCAGTCTTCATGAATGAATTGAGATAACTGCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCAAGTGGAGCTGGTGGTaGCCAGCTGGGTCTGGCTGG | + |
Preference number: 4 (lower is better) Translates to: ITYSYRGSRFPFNKVTCCKWSWW*PAGSGW Trigger: CCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTT...GCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CATGAATACAAACACAGTAGATGGGATAATGTAAAACCCTCCACTAGAGTATTGCGCCCTCGGGGTAGTTaGACACAGTGGGCTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: HEYKHSRWDNVKPSTRVLRPRGS*TQWACC Trigger: ACAGCAAGCCCACTGTGTTCAACTACCCCGAGGGCG...CAATACTCTAGTGGAGGGTTTTACATTATCCCATCTACTGTGTTTGTATTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTCATGCGGAACCGACTTaGCGTAGCCAGCAACATGTC | + |
Preference number: 4 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSHAEPT*RSQQHV Trigger: GACATGTTGCTGGCTACGTCAAGTCGGTTCCGCATG...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTTTCGGGGGATCAAAGTGTCTGTaGTCTTGTCCAGGACACGGT | + |
Preference number: 4 (lower is better) Translates to: LVIHDMGKMLQGFSEPFGGSKCL*SCPGHG Trigger: ACCGTGTCCTGGACAAGATCACAGACACTTTGATCC...CCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | TCCTTTTCTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAGAATGAGAAGGAGCTaGGCTAGGCGGCGATGCTGC | + |
Preference number: 4 (lower is better) Translates to: SFSVCITYSYRGSRFPFNRMRRS*ARRRCC Trigger: GCAGCATCGCCGCCTAGCTCAGCTCCTTCTCATTCT...ATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAGAAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCAAGAATGAGAAGGAGCTaGGCTAGGCGGCGATGCTGC | + |
Preference number: 4 (lower is better) Translates to: LCASHIPIGAQDFPLIKSRMRRS*ARRRCC Trigger: GCAGCATCGCCGCCTAGCTCAGCTCCTTCTCATTCT...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTGGATATGGGAAAGAATaGGAAGGAGCTGAGCTAGGC | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCGYGKE*EGAELG Trigger: GCCTAGCTCAGCTCCTTCTCATTCTTTCCCATATCC...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCTAGTCCATCTTCTGCCTaGCATAAAGGAATCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: QESGWTLNLSIRSAACIASPSSA*HKGIPV Trigger: AACTGGGATTCCTTTATGTCAGGCAGAAGATGGACT...AGCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR GCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGGCTAGGCGGCGATGCTaGTGCTGCAGAGTCAGGCCA | + |
Preference number: 4 (lower is better) Translates to: FHFGLEKEVILSCTRETKARRRC*CCRVRP Trigger: TGGCCTGACTCTGCAGCAGCAGCATCGCCGCCTAGC...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGCCATTCCCGAGGCTTTaGTGTGAAGGGTCATGGTCA | + |
Preference number: 4 (lower is better) Translates to: GSRFPFNKVTCCYRNASGPFPRL*CEGSWS Trigger: TGACCATGACCCTTCACACCAAAGCCTCGGGAATGG...CCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGCCATTCCCGAGGCTTTaGTGTGAAGGGTCATGGTCA | + |
Preference number: 4 (lower is better) Translates to: EIALSTTSIKGATLKSLLPFPRL*CEGSWS Trigger: TGACCATGACCCTTCACACCAAAGCCTCGGGAATGG...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCCCCTATCTGCTAGGTTaGTCAATAAGCCCATCATTG | + |
Preference number: 4 (lower is better) Translates to: SREWLDIESEYQKCRMHRPYLLG*SISPSL Trigger: CAATGATGGGCTTATTGACCAACCTAGCAGATAGGG...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGAGGACACGGTGGATGTaGTCCTTCTCTTCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: EIALSTTSIKGATLKSLLRTRWM*SFSSRD Trigger: GTCTCTGGAAGAGAAGGACCACATCCACCGTGTCCT...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 72 bp | AGAATTCTGCTAGTCATACATGACATGGGTAAAATGTaGCAGGGATTCTCAGAACCTTTCGGGGAGCCTGGG | + |
Preference number: 4 (lower is better) Translates to: RILLVIHDMGKM*QGFSEPFGEPG Trigger: CCCAGGCTCCCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAGCAGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGCGCCCTCGGGGTAGTTaGACACAGTGGGCTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: FHFGLEKEVILSCTRETKRPRGS*TQWACC Trigger: ACAGCAAGCCCACTGTGTTCAACTACCCCGAGGGCG...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | AATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGTCGCCCTCGGGGTAGTTaGACACAGTGGGCTTGCTGT | + |
Preference number: 4 (lower is better) Translates to: NYTRYVQCTHSCPARLMCRPRGS*TQWACC Trigger: ACAGCAAGCCCACTGTGTTCAACTACCCCGAGGGCG...ACACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR TCA 90 bp | ACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAACAGAATCATCCAACAAGGCACTaGCCATCTGGTCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: TPLRYTSKTYTHPLKEQNHPTRH*PSGQLS Trigger: TGACAGCTGACCAGATGGTCAGTGCCTTGTTGGATG...ATTCTGTTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR TCA 90 bp | AGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCCATCCAACAAGGCACTaGCCATCTGGTCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: RGSRFPFNKVTCCYRNASHPTRH*PSGQLS Trigger: TGACAGCTGACCAGATGGTCAGTGCCTTGTTGGATG...GCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGGCCCAGTTGATCATATaGACCAGCTCCCTATCTGCT | + |
Preference number: 4 (lower is better) Translates to: EIALSTTSIKGATLKSLLAQLII*TSSLSA Trigger: AGCAGATAGGGAGCTGGTTCATATGATCAACTGGGC...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAAGCCCAGTTGATCATATaGACCAGCTCCCTATCTGCT | + |
Preference number: 4 (lower is better) Translates to: LTTPLRYTSKTYTHPLKEAQLII*TSSLSA Trigger: AGCAGATAGGGAGCTGGTTCATATGATCAACTGGGC...TTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR TCA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTTCCACACATTTACCTTaGTTCCTGTCCAGGAGCAAG | + |
Preference number: 4 (lower is better) Translates to: VAKGERELLPRFSPGIPFSTHLP*FLSRSK Trigger: CTTGCTCCTGGACAGGAATCAAGGTAAATGTGTGGA...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCATGCGGAACCGACTTaGCGTAGCCAGCAACATGTC | + |
Preference number: 4 (lower is better) Translates to: PIGAQDFPLIKSHVAIGMHAEPT*RSQQHV Trigger: GACATGTTGCTGGCTACGTCAAGTCGGTTCCGCATG...CATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | GGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGGGATCAAAGTGTCTGTaGTCTTGTCCAGGACACGGT | + |
Preference number: 4 (lower is better) Translates to: GSRFPFNKVTCCYRNASGGSKCL*SCPGHG Trigger: ACCGTGTCCTGGACAAGATCACAGACACTTTGATCC...CCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CATTTTTCTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTCAAGTCCCCAAAGCCTaGCACTCTCTTTGCCCAGTT | + |
Preference number: 4 (lower is better) Translates to: HFSDNSIEIYLQDIHSPTQVPKA*HSLCPV Trigger: AACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTG...AGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAGAAAAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | CAGCTGTCTGATGTTCTTTGCCCATTTCAAACTTATTATCATAGCATGAATACATCCCCGGGTGTTCCATaGAGCGCCAGACGAGACCAA | + |
Preference number: 4 (lower is better) Translates to: QLSDVLCPFQTYYHSMNTSPGVP*SARRDQ Trigger: TTGGTCTCGTCTGGCGCTCCATGGAACACCCGGGGA...TGTATTCATGCTATGATAATAAGTTTGAAATGGGCAAAGAACATCAGACAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTGAGACTTCAAGGTGCTaGACAGAAACGTGTACACTC | + |
Preference number: 4 (lower is better) Translates to: AEASSWSHYEVLIRGEMFETSRC*TETCTL Trigger: GAGTGTACACGTTTCTGTCCAGCACCTTGAAGTCTC...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTGCTTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC | + |
Preference number: 4 (lower is better) Translates to: AEASSWSHYEVLIRGEMFALAIR*IKVSVI Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAAGC...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 72 bp | TGCAAGCGGGTGCTATTAGGAAGCCATGAGATCGCTTaGTCAACGACTTCAATTAAAGGAGCCACTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: CKRVLLGSHEIA*STTSIKGATLK Trigger: CTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTCATGGCTTCCTAATAGCACCCGCTTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 72 bp | GACTCCTCCGAGTCACAGTCATTGCCCATACATTACTaGTTCCCTGCCCCCAAGAATAAAACTAAACAAACC | + |
Preference number: 4 (lower is better) Translates to: DSSESQSLPIHY*FPAPKNKTKQT Trigger: GGTTTGTTTAGTTTTATTCTTGGGGGCAGGGAACAAGTAATGTATGGGCAATGACTGTGACTCGGAGGAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAACATCCAACAAGGCACTaGCCATCTGGTCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQHPTRH*PSGQLS Trigger: TGACAGCTGACCAGATGGTCAGTGCCTTGTTGGATG...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTGCCCAGTTGATCATATaGACCAGCTCCCTATCTGCT | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGAAQLII*TSSLSA Trigger: AGCAGATAGGGAGCTGGTTCATATGATCAACTGGGC...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTTCGAGAAGGTGGACCTaGTCATGGAGATTCAAGTCC | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGASRRWT*SWRFKS Trigger: GGACTTGAATCTCCATGATCAGGTCCACCTTCTCGA...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGGGGGCACAACGTTCTTaGATTTCATGTTGTAGAGAT | + |
Preference number: 4 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVGAQRS*ISCCRD Trigger: ATCTCTACAACATGAAATGCAAGAACGTTGTGCCCC...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAATTGTCAATGGTGCATTaGTTTGTAGCTGGACACATG | + |
Preference number: 4 (lower is better) Translates to: VFAEASSWSHYEVLIRGELSMVH*FVAGHM Trigger: CATGTGTCCAGCTACAAACCAATGCACCATTGACAA...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCAAATCACAAGAGGGCTTaGCCAAAGGTTGGCAGCCCT | + |
Preference number: 4 (lower is better) Translates to: LCASHIPIGAQDFPLIKSNHKRA*PKVGSP Trigger: AGGGCTGCCAACCTTTGGCCAAGCCCTCTTGTGATT...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTCCCTATCTGCTAGGTTaGTCAATAAGCCCATCATTG | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCPYLLG*SISPSL Trigger: CAATGATGGGCTTATTGACCAACCTAGCAGATAGGG...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAAAGGACACGGTGGATGTaGTCCTTCTCTTCCAGAGAC | + |
Preference number: 4 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQRTRWM*SFSSRD Trigger: GTCTCTGGAAGAGAAGGACCACATCCACCGTGTCCT...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAAGGCTCTCTTGGCCTTaGTTAGAGAGTGCAGACTAC | + |
Preference number: 4 (lower is better) Translates to: ALNYTRYVQCTHSCPARLRLSWP*LESADY Trigger: GTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCT...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR TCA 90 bp | CTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTCCTTGGCAGACTCCATaGTCATGTTTCCTTTCTCGT | + |
Preference number: 4 (lower is better) Translates to: LPLGAIMKCLSEVKCLLSPWQTP*SCFLSR Trigger: ACGAGAAAGGAAACATGATCATGGAGTCTGCCAAGG...AGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | ATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCCATCCAACAAGGCACTaGCCATCTGGTCAGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: ITYSYRGSRFPFNKVTCCHPTRH*PSGQLS Trigger: TGACAGCTGACCAGATGGTCAGTGCCTTGTTGGATG...GCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTCAAAGATCTCCACCATaGCTTCCACACATTTACCTT | + |
Preference number: 4 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCQRSPP*LPHIYL Trigger: AAGGTAAATGTGTGGAAGGCATGGTGGAGATCTTTG...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTACAAACTCTTCTCCCTaGAGGTTCATCATGCGGAAC | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGATNSSP*RFIMRN Trigger: GTTCCGCATGATGAACCTGCAGGGAGAAGAGTTTGT...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGAATCACAAGAGGGCTTaGCCAAAGGTTGGCAGCCCT | + |
Preference number: 4 (lower is better) Translates to: ELHKIRSMYSFLSSKINVNHKRA*PKVGSP Trigger: AGGGCTGCCAACCTTTGGCCAAGCCCTCTTGTGATT...CACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | GTTTGCTCCATTTGCAAGAGAGTAAATTTTCATGGAGTTAATCTAGGATGTGTGAATCACAAGAGGGCTTaGCCAAAGGTTGGCAGCCCT | + |
Preference number: 4 (lower is better) Translates to: VCSICKRVNFHGVNLGCVNHKRA*PKVGSP Trigger: AGGGCTGCCAACCTTTGGCCAAGCCCTCTTGTGATT...CACACATCCTAGATTAACTCCATGAAAATTTACTCTCTTGCAAATGGAGCAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTTGTCCAGGACACGGTaGATGTGGTCCTTCTCTTCC | + |
Preference number: 4 (lower is better) Translates to: ITYSYRGSRFPFNKVTCCLSRTR*MWSFSS Trigger: GGAAGAGAAGGACCACATCCACCGTGTCCTGGACAA...GCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTGCTTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGAALAIR*IKVSVI Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAAGC...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCGCTTTGGCCATCAGGTaGATCAAAGTGTCTGTGATC | + |
Preference number: 4 (lower is better) Translates to: SRFPFNKVTCCYRNASGCALAIR*IKVSVI Trigger: GATCACAGACACTTTGATCCACCTGATGGCCAAAGC...GCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGGGGACTAGTATCACATaGCAGGCTCTCTTGGCCTTG | + |
Preference number: 4 (lower is better) Translates to: ELHKIRSMYSFLSSKINVGTSIT*QALLAL Trigger: CAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCC...CACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR CAA 72 bp | GACTTTCTGTTTCCCACAAGTCATGGGAAGCAAGAATaGTCTAGAACCCACCATGTATATAATACTCGGCAG | + |
Preference number: 4 (lower is better) Translates to: DFLFPTSHGKQE*SRTHHVYNTRQ Trigger: CTGCCGAGTATTATATACATGGTGGGTTCTAGACAATTCTTGCTTCCCATGACTTGTGGGAAACAGAAAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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3UTR CAA 72 bp | AATAGAGAGATGTATCTTCAAGAGAGTGGTTGGACATaGAATCTGAGTATCAGAAGTGCCGCATGCATCGCT | + |
Preference number: 4 (lower is better) Translates to: NREMYLQESGWT*NLSIRSAACIA Trigger: AGCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGAAGATACATCTCTCTATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR CAA 72 bp | GCCGCTACTCTCTTCCTTGGAACTCAAATTGCCATTTaGGAAATGGCTGCCAGTAGAGCTAGTATTACTTTA | + |
Preference number: 4 (lower is better) Translates to: AATLFLGTQIAI*EMAASRASITL Trigger: TAAAGTAATACTAGCTCTACTGGCAGCCATTTCCAAAATGGCAATTTGAGTTCCAAGGAAGAGAGTAGCGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
3UTR CAA 72 bp | TCAACCTCCAAAGACCTGTACCAAAGAGAGTCATGGTaGCCTTATGTGCTACTGTATGACTCTATTTGCCTT | + |
Preference number: 4 (lower is better) Translates to: STSKDLYQRESW*PYVLLYDSICL Trigger: AAGGCAAATAGAGTCATACAGTAGCACATAAGGCAACCATGACTCTCTTTGGTACAGGTCTTTGGAGGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
||
CDS-3UTR TCA 90 bp | GAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGCTCTCTTTGCCCAGTTaGTCATATGAACCAGCTCCC | + |
Preference number: 4 (lower is better) Translates to: ELHKIRSMYSFLSSKINVLSLPS*SYEPAP Trigger: GGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAG...CACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
CDS-3UTR TCA 90 bp | ATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCCTCTCTTTGCCCAGTTaGTCATATGAACCAGCTCCC | + |
Preference number: 4 (lower is better) Translates to: ITYSYRGSRFPFNKVTCCLSLPS*SYEPAP Trigger: GGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAG...GCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR TCA 90 bp | GAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGTCGAGAAGGTGGACCTaGTCATGGAGATTCAAGTCC | + |
Preference number: 4 (lower is better) Translates to: ELHKIRSMYSFLSSKINVSRRWT*SWRFKS Trigger: GGACTTGAATCTCCATGATCAGGTCCACCTTCTCGA...CACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
CDS-3UTR TCA 90 bp | TCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTTCGAGAAGGTGGACCTaGTCATGGAGATTCAAGTCC | + |
Preference number: 4 (lower is better) Translates to: SHIPIGAQDFPLIKSHVASRRWT*SWRFKS Trigger: GGACTTGAATCTCCATGATCAGGTCCACCTTCTCGA...AGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAATCCACACATTTACCTTaGTTCCTGTCCAGGAGCAAG | + |
Preference number: 4 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQSTHLP*FLSRSK Trigger: CTTGCTCCTGGACAGGAATCAAGGTAAATGTGTGGA...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR GCA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGCAAAGATCTCCACCATaGCTTCCACACATTTACCTT | + |
Preference number: 4 (lower is better) Translates to: EIALSTTSIKGATLKSLLQRSPP*LPHIYL Trigger: AAGGTAAATGTGTGGAAGGCATGGTGGAGATCTTTG...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR GCA 90 bp | AGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCTGTAGAGATGCTCCATaGCTTTGTTACTCATGTGCC | + |
Preference number: 4 (lower is better) Translates to: RGSRFPFNKVTCCYRNASCRDAP*LCYSCA Trigger: GGCACATGAGTAACAAAGGCATGGAGCATCTCTACA...GCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR CCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCAGAGACTTCAAGGTGCTaGACAGAAACGTGTACACTC | + |
Preference number: 4 (lower is better) Translates to: LCASHIPIGAQDFPLIKSETSRC*TETCTL Trigger: GAGTGTACACGTTTCTGTCCAGCACCTTGAAGTCTC...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR CCA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAAGAGACTTCAAGGTGCTaGACAGAAACGTGTACACTC | + |
Preference number: 4 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQETSRC*TETCTL Trigger: GAGTGTACACGTTTCTGTCCAGCACCTTGAAGTCTC...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR CCA 90 bp | CAATGCAGTTATCTCAATTCATTCATGAAGACTGAAGACTATAGGAATCCTCATGAGTCAGGCCAGCTTTaGCCATCAGGTGGATCAAAG | + |
Preference number: 4 (lower is better) Translates to: QCSYLNSFMKTEDYRNPHESGQL*PSGGSK Trigger: CTTTGATCCACCTGATGGCCAAAGCTGGCCTGACTC...ATGAGGATTCCTATAGTCTTCAGTCTTCATGAATGAATTGAGATAACTGCATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR CCA 90 bp | CCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCTCATGTGCCGGATATaGGAAAGAATGAGAAGGAGC | + |
Preference number: 4 (lower is better) Translates to: PIGAQDFPLIKSHVAIGMLMCRI*ERMRRS Trigger: GCTCCTTCTCATTCTTTCCCATATCCGGCACATGAG...CATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
||
CDS-3UTR TCA 90 bp | CATGAATACAAACACAGTAGATGGGATAATGTAAAACCCTCCACTAGAGTATTGTCCACACATTTACCTTaGTTCCTGTCCAGGAGCAAG | + |
Preference number: 4 (lower is better) Translates to: HEYKHSRWDNVKPSTRVLSTHLP*FLSRSK Trigger: CTTGCTCCTGGACAGGAATCAAGGTAAATGTGTGGA...CAATACTCTAGTGGAGGGTTTTACATTATCCCATCTACTGTGTTTGTATTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCATGTAGAGATGCTCCATaGCTTTGTTACTCATGTGCC | + |
Preference number: 4 (lower is better) Translates to: LCASHIPIGAQDFPLIKSCRDAP*LCYSCA Trigger: GGCACATGAGTAACAAAGGCATGGAGCATCTCTACA...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | TGTTTACTCTCTAGGCTTGGGTCTCAACAAGTAGCTTCAATGCAGTTATCTCAAGGGGCACAACGTTCTTaGATTTCATGTTGTAGAGAT | + |
Preference number: 4 (lower is better) Translates to: CLLSRLGSQQVASMQLSQGAQRS*ISCCRD Trigger: ATCTCTACAACATGAAATGCAAGAACGTTGTGCCCC...TTGAGATAACTGCATTGAAGCTACTTGTTGAGACCCAAGCCTAGAGAGTAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR GCA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTGGGGCACAACGTTCTTaGATTTCATGTTGTAGAGAT | + |
Preference number: 4 (lower is better) Translates to: QDFPLIKSHVAIGMQAGAGAQRS*ISCCRD Trigger: ATCTCTACAACATGAAATGCAAGAACGTTGTGCCCC...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTATTGTCAATGGTGCATTaGTTTGTAGCTGGACACATG | + |
Preference number: 4 (lower is better) Translates to: ALNYTRYVQCTHSCPARLLSMVH*FVAGHM Trigger: CATGTGTCCAGCTACAAACCAATGCACCATTGACAA...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
||
CDS-3UTR CCA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATTCAGAATAGATCATaGGCGGTTCAGCATCCAACA | + |
Preference number: 4 (lower is better) Translates to: ALNYTRYVQCTHSCPARLIQNRS*AVQHPT Trigger: TGTTGGATGCTGAACCGCCCATGATCTATTCTGAAT...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CCA 90 bp | ATTCTGCTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTATTCAGAATAGATCATaGGCGGTTCAGCATCCAACA | + |
Preference number: 4 (lower is better) Translates to: ILLVIHDMGKMLQGFSEPIQNRS*AVQHPT Trigger: TGTTGGATGCTGAACCGCCCATGATCTATTCTGAAT...AGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAGCAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR TCA 90 bp | CTGACAACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAATTCTTTTCAAAGTCTTaGCAGAATGTTCTCTGTCCA | + |
Preference number: 4 (lower is better) Translates to: LTTPLRYTSKTYTHPLKEFFSKS*QNVLCP Trigger: TGGACAGAGAACATTCTGTCAAGACTTTGAAAAGAA...TTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGTTGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR GCA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACAAAGATCTCCACCATaGCTTCCACACATTTACCTT | + |
Preference number: 4 (lower is better) Translates to: LCASHIPIGAQDFPLIKSQRSPP*LPHIYL Trigger: AAGGTAAATGTGTGGAAGGCATGGTGGAGATCTTTG...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAAATTCAGAATAGATCATaGGCGGTTCAGCATCCAACA | + |
Preference number: 4 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQIQNRS*AVQHPT Trigger: TGTTGGATGCTGAACCGCCCATGATCTATTCTGAAT...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | ATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCCCCTATCTGCTAGGTTaGTCAATAAGCCCATCATTG | + |
Preference number: 4 (lower is better) Translates to: ITYSYRGSRFPFNKVTCCPYLLG*SISPSL Trigger: CAATGATGGGCTTATTGACCAACCTAGCAGATAGGG...GCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGCAGACTACAGGTTaGTTTTTCTTGTACCCTGGT | + |
Preference number: 4 (lower is better) Translates to: PELHKIRSMYSFLSSKINVQTTG*FFLYPG Trigger: ACCAGGGTACAAGAAAAACCAACCTGTAGTCTGCAC...ATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR GCA 90 bp | CAGCTGTCTGATGTTCTTTGCCCATTTCAAACTTATTATCATAGCATGAATACATGTAGAGATGCTCCATaGCTTTGTTACTCATGTGCC | + |
Preference number: 4 (lower is better) Translates to: QLSDVLCPFQTYYHSMNTCRDAP*LCYSCA Trigger: GGCACATGAGTAACAAAGGCATGGAGCATCTCTACA...TGTATTCATGCTATGATAATAAGTTTGAAATGGGCAAAGAACATCAGACAGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGCCCTATCTGCTAGGTTaGTCAATAAGCCCATCATTG | + |
Preference number: 4 (lower is better) Translates to: FHFGLEKEVILSCTRETKPYLLG*SISPSL Trigger: CAATGATGGGCTTATTGACCAACCTAGCAGATAGGG...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CCA 90 bp | CAATGCAGTTATCTCAATTCATTCATGAAGACTGAAGACTATAGGAATCCTCATTTGTCAATGGTGCATTaGTTTGTAGCTGGACACATG | + |
Preference number: 4 (lower is better) Translates to: QCSYLNSFMKTEDYRNPHLSMVH*FVAGHM Trigger: CATGTGTCCAGCTACAAACCAATGCACCATTGACAA...ATGAGGATTCCTATAGTCTTCAGTCTTCATGAATGAATTGAGATAACTGCATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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3UTR CAA 72 bp | ATCCACTTTCCATTTGTGGTTCTTGAACAGCATCTTTaGTTTGAGAGGATCACTCTTCATTTGGTAGCATAT | + |
Preference number: 4 (lower is better) Translates to: IHFPFVVLEQHL*FERITLHLVAY Trigger: ATATGCTACCAAATGAAGAGTGATCCTCTCAAACAAAAGATGCTGTTCAAGAACCACAAATGGAAAGTGGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR CAA 72 bp | AATACTTATTGCACATCCACTTTCCATTTGTGGTTCTaGAACAGCATCTTTTGTTTGAGAGGATCACTCTTC | + |
Preference number: 4 (lower is better) Translates to: NTYCTSTFHLWF*NSIFCLRGSLF Trigger: GAAGAGTGATCCTCTCAAACAAAAGATGCTGTTCAAGAACCACAAATGGAAAGTGGATGTGCAATAAGTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR CAA 72 bp | CTAGACATTGTCACCTACATTGATAGCATCTTTTCTTaGGATGACCAGAATCAAATTGGCAAGGTAAGCAAT | + |
Preference number: 4 (lower is better) Translates to: LDIVTYIDSIFS*DDQNQIGKVSN Trigger: ATTGCTTACCTTGCCAATTTGATTCTGGTCATCCAAAGAAAAGATGCTATCAATGTAGGTGACAATGTCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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3UTR CAA 72 bp | TTCATACAAAATACTTATTGCACATCCACTTTCCATTaGTGGTTCTTGAACAGCATCTTTTGTTTGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: FIQNTYCTSTFH*WFLNSIFCLRG Trigger: TCCTCTCAAACAAAAGATGCTGTTCAAGAACCACAAATGGAAAGTGGATGTGCAATAAGTATTTTGTATGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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3UTR CAA 72 bp | AAATTTCTCTTAAGTCTCCGAAGCACAGTGCAAAAATaGAGACATAATCACTTAGAAAGCAAGTCTAAAGGA | + |
Preference number: 4 (lower is better) Translates to: KFLLSLRSTVQK*RHNHLESKSKG Trigger: TCCTTTAGACTTGCTTTCTAAGTGATTATGTCTCAATTTTTGCACTGTGCTTCGGAGACTTAAGAGAAATTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS GCA 90 bp | TGCTGGCCGTGCGGGTGCAGGAAAGGAGACAGCTGCGGCGGCGGGTaGAGCAGCATCAGCGGGCTAGGCGACACGCTGTTGAGCTGGGGG | + |
Preference number: 5 (lower is better) Translates to: CWPCGCRKGDSCGGG*SSISGLGDTLLSWG Trigger: CCCCCAGCTCAACAGCGTGTCGCCTAGCCCGCTGATGCTGCTGCACCCGCCGCCGCAGCTGTCTCCTTTCCTGCACCCGCACGGCCAGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | ACCTGTAGAAGGCGGGAGGGCCGGTGTCGCGCACGGCGTAGGCGCTaGGCTCGTTCTCCAGGTAGTAGGGCACCTGCTGGCCGTGCGGGT | + |
Preference number: 5 (lower is better) Translates to: TCRRREGRCRARRRR*ARSPGSRAPAGRAG Trigger: ACCCGCACGGCCAGCAGGTGCCCTACTACCTGGAGAACGAGCCCAGCGCCTACGCCGTGCGCGACACCGGCCCTCCCGCCTTCTACAGGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | CTGGGTCTGGCTGGGCTCCTCTGGGGGCACTCCCATGCGACTGGCTaGGGCATGAAGGCGGTGGGCATCCAACATCTCCAGGAGCAGGTC | + |
Preference number: 5 (lower is better) Translates to: LGLAGLLWGHSHATG*GMKAVGIQHLQEQV Trigger: GACCTGCTCCTGGAGATGTTGGATGCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS GCA 90 bp | TCCACGTATACCTCGCCCAGGGCCCTCTCCATGGGCATCTTGAGCTaGGGGCGGTTGAGGGGCTCCAGCTCGTTCCCTTGGATCTGGTGC | + |
Preference number: 5 (lower is better) Translates to: STYTSPRALSMGILS*GRLRGSSSFPWIWC Trigger: GCACCAGATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCCATGGAGAGGGCCCTGGGCGAGGTATACGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | AGGAATGTGCTGAAGTGGAGCTGGTGGTGGCCAGCTGGGTCTGGCTaGGCTCCTCTGGGGGCACTCCCATGCGACTGGCTGGGGCATGAA | + |
Preference number: 5 (lower is better) Translates to: RNVLKWSWWWPAGSG*APLGALPCDWLGHE Trigger: TTCATGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | TGTAAGGAATGTGCTGAAGTGGAGCTGGTGGTGGCCAGCTGGGTCTaGCTGGGCTCCTCTGGGGGCACTCCCATGCGACTGGCTGGGGCA | + |
Preference number: 5 (lower is better) Translates to: CKECAEVELVVASWV*LGSSGGTPMRLAGA Trigger: TGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTTACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | CCGGGGGTATGTAGTAGGTTTGTAAGGAATGTGCTGAAGTGGAGCTaGTGGTGGCCAGCTGGGTCTGGCTGGGCTCCTCTGGGGGCACTC | + |
Preference number: 5 (lower is better) Translates to: PGVCSRFVRNVLKWS*WWPAGSGWAPLGAL Trigger: GAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTTACAAACCTACTACATACCCCCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | GGGGTATGTAGTAGGTTTGTAAGGAATGTGCTGAAGTGGAGCTGGTaGTGGCCAGCTGGGTCTGGCTGGGCTCCTCTGGGGGCACTCCCA | + |
Preference number: 5 (lower is better) Translates to: GVCSRFVRNVLKWSW*WPAGSGWAPLGALP Trigger: TGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTTACAAACCTACTACATACCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | GTATGTAGTAGGTTTGTAAGGAATGTGCTGAAGTGGAGCTGGTGGTaGCCAGCTGGGTCTGGCTGGGCTCCTCTGGGGGCACTCCCATGC | + |
Preference number: 5 (lower is better) Translates to: VCSRFVRNVLKWSWW*PAGSGWAPLGALPC Trigger: GCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTTACAAACCTACTACATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGATTGAGCTGCGGGCGGTaGAGGGGCTCCAGCTCGTTC | + |
Preference number: 5 (lower is better) Translates to: PLILESHWWWMHATVYAGLSCGR*RGSSSF Trigger: GAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAA...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | GCAGAGTCAGGCCAGCTTTGGCCATCAGGTGGATCAAAGTGTCTGTaGTCTTGTCCAGGACACGGTGGATGTGGTCCTTCTCTTCCAGAG | + |
Preference number: 5 (lower is better) Translates to: AESGQLWPSGGSKCL*SCPGHGGCGPSLPE Trigger: CTCTGGAAGAGAAGGACCACATCCACCGTGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAAGCTGGCCTGACTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | CCAATCATCAGAATCTCCAGCCAGGCACACTCGAGAAGGTGGACCTaGTCATGGAGATTCAAGTCCCCAAAGCCTGGCACTCTCTTTGCC | + |
Preference number: 5 (lower is better) Translates to: PIIRISSQAHSRRWT*SWRFKSPKPGTLFA Trigger: GGCAAAGAGAGTGCCAGGCTTTGGGGACTTGAATCTCCATGATCAGGTCCACCTTCTCGAGTGTGCCTGGCTGGAGATTCTGATGATTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCCTCCAGCTCGTTCCCTaGGATCTGGTGCAGCAAGGC | + |
Preference number: 5 (lower is better) Translates to: SREWLDIESEYQKCRMHRLQLVP*DLVQQG Trigger: GCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAG...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | CCACTCATACTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAAGAGTCAGGCCAGCTTaGGCCATCAGGTGGATCAAA | + |
Preference number: 5 (lower is better) Translates to: PLILESHWWWMHATVYAGRVRPA*AIRWIK Trigger: TTTGATCCACCTGATGGCCAAAGCTGGCCTGACTCT...TCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAGTATGAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | AGTCATTGCACACGGCACAGTAGCGAGTCTCCTTGGCAGACTCCATaGTCATGTTTCCTTTCTCGTTACTGCTGGACAGTCTCTCTCGGC | + |
Preference number: 5 (lower is better) Translates to: SHCTRHSSESPWQTP*SCFLSRYCWTVSLG Trigger: GCCGAGAGAGACTGTCCAGCAGTAACGAGAAAGGAAACATGATCATGGAGTCTGCCAAGGAGACTCGCTACTGTGCCGTGTGCAATGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | TCTCCTGAAGCACCCATTTCATTTCGGCCTTCCAAGTCATCTCTCTaGCGCTTGTGCTTCAACATTCTCCCTCCTCGGCGGTCTTTCCGT | + |
Preference number: 5 (lower is better) Translates to: SPEAPISFRPSKSSL*RLCFNILPPRRSFR Trigger: ACGGAAAGACCGCCGAGGAGGGAGAATGTTGAAGCACAAGCGTCAGAGAGATGACTTGGAAGGCCGAAATGAAATGGGTGCTTCAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | AATCACAAGAGGGCTTGGCCAAAGGTTGGCAGCCCTCATGTCTCCTaGAGCACCCATTTCATTTCGGCCTTCCAAGTCATCTCTCTGACG | + |
Preference number: 5 (lower is better) Translates to: NHKRAWPKVGSPHVS*STHFISAFQVISLT Trigger: CGTCAGAGAGATGACTTGGAAGGCCGAAATGAAATGGGTGCTTCAGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCCCTCTTGTGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTTTCGGGGGGCTTGGCCAAAGGTaGGCAGCCCTCATGTCTCCT | + |
Preference number: 5 (lower is better) Translates to: LVIHDMGKMLQGFSEPFGGLGQR*AALMSP Trigger: AGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCCC...CCCGAAAGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CTAGAAAGCCACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTAAAGTGTCTGTGATCTaGTCCAGGACACGGTGGATG | + |
Preference number: 5 (lower is better) Translates to: LESHWWWMHATVYAGDRIKVSVI*SRTRWM Trigger: CATCCACCGTGTCCTGGACAAGATCACAGACACTTT...AATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTGGCTTTCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CACTGGTGGTGGATGCATGCCACAGTGTACGCAGGAGACAGAATTCTGCTAGTCAGATGCTCCATGCCTTaGTTACTCATGTGCCGGATA | + |
Preference number: 5 (lower is better) Translates to: HWWWMHATVYAGDRILLVRCSMP*LLMCRI Trigger: TATCCGGCACATGAGTAACAAAGGCATGGAGCATCT...GACTAGCAGAATTCTGTCTCCTGCGTACACTGTGGCATGCATCCACCACCAGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | TTGACACCTACATTTCTGGACTCTGGGGATGGGACTAGTATCACATaGCAGGCTCTCTTGGCCTTGGTTAGAGAGTGCAGACTACAGGTT | + |
Preference number: 5 (lower is better) Translates to: LTPTFLDSGDGTSIT*QALLALVRECRLQV Trigger: AACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATCCCCAGAGTCCAGAAATGTAGGTGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | CCCATGCCTTTCCCCAAGTTCCTGGAGCATCTACAGGAACACAGGTATCTGATGCTCTTCCTCCGGTTCTaGTCAATGGTGCATTGGTTT | + |
Preference number: 5 (lower is better) Translates to: PMPFPKFLEHLQEHRYLMLFLRF*SMVHWF Trigger: AAACCAATGCACCATTGACAAGAACCGGAGGAAGAG...CATCAGATACCTGTGTTCCTGTAGATGCTCCAGGAACTTGGGGAAAGGCATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGGGGCTTGGCCAAAGGTaGGCAGCCCTCATGTCTCCT | + |
Preference number: 5 (lower is better) Translates to: GSRFPFNKVTCCYRNASGGLGQR*AALMSP Trigger: AGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCCC...CCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | CATATTCAGAATAGATCATGGGCGGTTCAGCATCCAACAAGGCACTaGCCATCTGGTCAGCTGTCAAGGACAAGGCAGGGCTATTCTTCT | + |
Preference number: 5 (lower is better) Translates to: HIQNRSWAVQHPTRH*PSGQLSRTRQGYSS Trigger: AGAAGAATAGCCCTGCCTTGTCCTTGACAGCTGACCAGATGGTCAGTGCCTTGTTGGATGCTGAACCGCCCATGATCTATTCTGAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | CATGGAGATTCAAGTCCCCAAAGCCTGGCACTCTCTTTGCCCAGTTaGTCATATGAACCAGCTCCCTATCTGCTAGGTTGGTCAATAAGC | + |
Preference number: 5 (lower is better) Translates to: HGDSSPQSLALSLPS*SYEPAPYLLGWSIS Trigger: GCTTATTGACCAACCTAGCAGATAGGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTGAATCTCCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 90 bp | TTCTGGACTCTGGGGATGGGACTAGTATCACATGGCAGGCTCTCTTaGCCTTGGTTAGAGAGTGCAGACTACAGGTTGGTTTTTCTTGTA | + |
Preference number: 5 (lower is better) Translates to: FWTLGMGLVSHGRLS*PWLESADYRLVFLV Trigger: TACAAGAAAAACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATCCCCAGAGTCCAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | TCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCCTCCAGCTCGTTCCCTaGGATCTGGTGCAGCAAGGC | + |
Preference number: 5 (lower is better) Translates to: SRFPFNKVTCCYRNASGCLQLVP*DLVQQG Trigger: GCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAG...GCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | ATTCTGCTAGTCATACATGACATGGGTAAAATGTTGCAGGGATTCTCAGAACCTCTCCAGCTCGTTCCCTaGGATCTGGTGCAGCAAGGC | + |
Preference number: 5 (lower is better) Translates to: ILLVIHDMGKMLQGFSEPLQLVP*DLVQQG Trigger: GCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAG...AGGTTCTGAGAATCCCTGCAACATTTTACCCATGTCATGTATGACTAGCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAGGGCTTGGCCAAAGGTaGGCAGCCCTCATGTCTCCT | + |
Preference number: 5 (lower is better) Translates to: ALNYTRYVQCTHSCPARLGLGQR*AALMSP Trigger: AGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCCC...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | AGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGCTTGGCCAAAGGTaGGCAGCCCTCATGTCTCCT | + |
Preference number: 5 (lower is better) Translates to: RGSRFPFNKVTCCYRNASGLGQR*AALMSP Trigger: AGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCCC...GCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAGAGTCAGGCCAGCTTaGGCCATCAGGTGGATCAAA | + |
Preference number: 5 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVRVRPA*AIRWIK Trigger: TTTGATCCACCTGATGGCCAAAGCTGGCCTGACTCT...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 90 bp | TTCAAGTCCCCAAAGCCTGGCACTCTCTTTGCCCAGTTGATCATATaGACCAGCTCCCTATCTGCTAGGTTGGTCAATAAGCCCATCATT | + |
Preference number: 5 (lower is better) Translates to: FKSPKPGTLFAQLII*TSSLSARLVNKPII Trigger: AATGATGGGCTTATTGACCAACCTAGCAGATAGGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCCTCTTCCTCCGGTTCTaGTCAATGGTGCATTGGTTT | + |
Preference number: 5 (lower is better) Translates to: SREWLDIESEYQKCRMHRLFLRF*SMVHWF Trigger: AAACCAATGCACCATTGACAAGAACCGGAGGAAGAG...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAAGTGTCTGTGATCTaGTCCAGGACACGGTGGATG | + |
Preference number: 5 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVKVSVI*SRTRWM Trigger: CATCCACCGTGTCCTGGACAAGATCACAGACACTTT...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTTTAGAGTCAGGCCAGCTTaGGCCATCAGGTGGATCAAA | + |
Preference number: 5 (lower is better) Translates to: AEASSWSHYEVLIRGEMFRVRPA*AIRWIK Trigger: TTTGATCCACCTGATGGCCAAAGCTGGCCTGACTCT...AAACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | TCAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCAGTGCAGACTACAGGTaGGTTTTTCTTGTACCCTGG | + |
Preference number: 5 (lower is better) Translates to: SREWLDIESEYQKCRMHRSADYR*VFLVPW Trigger: CCAGGGTACAAGAAAAACCAACCTGTAGTCTGCACT...GCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS GCA 90 bp | GAATTAAGCAAAATGATGGATTTGAGGCACACAAACTCTTCTCCCTaGAGGTTCATCATGCGGAACCGACTTGACGTAGCCAGCAACATG | + |
Preference number: 5 (lower is better) Translates to: ELSKMMDLRHTNSSP*RFIMRNRLDVASNM Trigger: CATGTTGCTGGCTACGTCAAGTCGGTTCCGCATGATGAACCTGCAGGGAGAAGAGTTTGTGTGCCTCAAATCCATCATTTTGCTTAATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CAAGAGAGTGGTTGGACATTGAATCTGAGTATCAGAAGTGCCGCATGCATCGCTAGCAGAGTGGAATCTTaGACACCTACATTTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: QESGWTLNLSIRSAACIASRVES*TPTFLD Trigger: GTCCAGAAATGTAGGTGTCAAAGATTCCACTCTGCT...AGCGATGCATGCGGCACTTCTGATACTCAGATTCAATGTCCAACCACTCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | TTTCATTTTGGTTTGGAAAAGGAAGTAATCCTTAGTTGTACTAGAGAGACCAAGCTCCAGCTCGTTCCCTaGGATCTGGTGCAGCAAGGC | + |
Preference number: 5 (lower is better) Translates to: FHFGLEKEVILSCTRETKLQLVP*DLVQQG Trigger: GCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAG...CTTGGTCTCTCTAGTACAACTAAGGATTACTTCCTTTTCCAAACCAAAATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067086.14 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | AAGTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGTCCCTATCTGCTAGGTaGGTCAATAAGCCCATCATT | + |
Preference number: 5 (lower is better) Translates to: KSLLRLPLGAIMKCLSEVSLSAR*VNKPII Trigger: AATGATGGGCTTATTGACCAACCTAGCAGATAGGGA...CACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGACTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GTCTTTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAATCCCTATCTGCTAGGTaGGTCAATAAGCCCATCATT | + |
Preference number: 5 (lower is better) Translates to: VFAEASSWSHYEVLIRGESLSAR*VNKPII Trigger: AATGATGGGCTTATTGACCAACCTAGCAGATAGGGA...TTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGAAAGTGTCTGTGATCTaGTCCAGGACACGGTGGATG | + |
Preference number: 5 (lower is better) Translates to: GSRFPFNKVTCCYRNASGKVSVI*SRTRWM Trigger: CATCCACCGTGTCCTGGACAAGATCACAGACACTTT...CCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GTAGCAAAGGGAGAAAGAGAGCTGTTACCAAGATTTAGCCCTGGAATCCCTTTTCTTGTCAATGGTGCATaGGTTTGTAGCTGGACACAT | + |
Preference number: 5 (lower is better) Translates to: VAKGERELLPRFSPGIPFLVNGA*VCSWTH Trigger: ATGTGTCCAGCTACAAACCAATGCACCATTGACAAG...AAAAGGGATTCCAGGGCTAAATCTTGGTAACAGCTCTCTTTCTCCCTTTGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | TTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGAGGCTTCCTCTCTTCCTCCGGTTCTaGTCAATGGTGCATTGGTTT | + |
Preference number: 5 (lower is better) Translates to: LSTTSIKGATLKSLLRLPLFLRF*SMVHWF Trigger: AAACCAATGCACCATTGACAAGAACCGGAGGAAGAG...AGGAAGCCTCAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATACATGGCAGGCTCTCTaGGCCTTGGTTAGAGAGTGC | + |
Preference number: 5 (lower is better) Translates to: PELHKIRSMYSFLSSKINTWQAL*ALVREC Trigger: GCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGT...ATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGG 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS CCA 90 bp | GCAACTCTTCCTCCGGTTCTTGTCAATGGTGCATTGGTTTGTAGCTaGACACATGTAGTCATTGTGTCCTTGAATGCTTCTCTTAAAGAA | + |
Preference number: 5 (lower is better) Translates to: ATLPPVLVNGALVCS*THVVIVSLNASLKE Trigger: TTCTTTAAGAGAAGCATTCAAGGACACAATGACTACATGTGTCCAGCTACAAACCAATGCACCATTGACAAGAACCGGAGGAAGAGTTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCAAGCGGGTGCTCTCTTCCTCCGGTTCTaGTCAATGGTGCATTGGTTT | + |
Preference number: 5 (lower is better) Translates to: QDFPLIKSHVAIGMQAGALFLRF*SMVHWF Trigger: AAACCAATGCACCATTGACAAGAACCGGAGGAAGAG...AGCACCCGCTTGCATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTACTTGTCAATGGTGCATaGGTTTGTAGCTGGACACAT | + |
Preference number: 5 (lower is better) Translates to: ALNYTRYVQCTHSCPARLLVNGA*VCSWTH Trigger: ATGTGTCCAGCTACAAACCAATGCACCATTGACAAG...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | TTGCTGAGGCTTCCTCTTGGAGCCATTATGAAGTGCTTATCAGAGGTGAAATGTAGCAAAATGATGGATTaGAGGCACACAAACTCTTCT | + |
Preference number: 5 (lower is better) Translates to: LLRLPLGAIMKCLSEVKCSKMMD*RHTNSS Trigger: AGAAGAGTTTGTGTGCCTCAAATCCATCATTTTGCT...ACATTTCACCTCTGATAAGCACTTCATAATGGCTCCAAGAGGAAGCCTCAGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGAGATGCTCCATGCCTTaGTTACTCATGTGCCGGATA | + |
Preference number: 5 (lower is better) Translates to: PIGAQDFPLIKSHVAIGMRCSMP*LLMCRI Trigger: TATCCGGCACATGAGTAACAAAGGCATGGAGCATCT...CATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | AATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGTCAGGCTCTCTTGGCCTaGGTTAGAGAGTGCAGACTA | + |
Preference number: 5 (lower is better) Translates to: NYTRYVQCTHSCPARLMCQALLA*VRECRL Trigger: TAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTG...ACACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | CTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACTTGTCAATGGTGCATaGGTTTGTAGCTGGACACAT | + |
Preference number: 5 (lower is better) Translates to: LCASHIPIGAQDFPLIKSLVNGA*VCSWTH Trigger: ATGTGTCCAGCTACAAACCAATGCACCATTGACAAG...TGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | CCTATAGGGGCTCAAGATTTCCCTTTAATAAAGTCACATGTTGCTATAGGAATGCTTGTCAATGGTGCATaGGTTTGTAGCTGGACACAT | + |
Preference number: 5 (lower is better) Translates to: PIGAQDFPLIKSHVAIGMLVNGA*VCSWTH Trigger: ATGTGTCCAGCTACAAACCAATGCACCATTGACAAG...CATTCCTATAGCAACATGTGACTTTATTAAAGGGAAATCTTGAGCCCCTATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | ATTATGAAGTGCTTATCAGAGGTGAAATGTTTACTCTCTAGGCTTGGGTCTCAATCCCTATCTGCTAGGTaGGTCAATAAGCCCATCATT | + |
Preference number: 5 (lower is better) Translates to: IMKCLSEVKCLLSRLGSQSLSAR*VNKPII Trigger: AATGATGGGCTTATTGACCAACCTAGCAGATAGGGA...TTGAGACCCAAGCCTAGAGAGTAAACATTTCACCTCTGATAAGCACTTCATAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | TTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGAGGCTTCCTAGCAAAATGATGGATTaGAGGCACACAAACTCTTCT | + |
Preference number: 5 (lower is better) Translates to: LSTTSIKGATLKSLLRLPSKMMD*RHTNSS Trigger: AGAAGAGTTTGTGTGCCTCAAATCCATCATTTTGCT...AGGAAGCCTCAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | GCCCTGAATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAAGTCCTTGTAGGTCCTaGTCAGAGCTTCTTTTCAAA | + |
Preference number: 5 (lower is better) Translates to: ALNYTRYVQCTHSCPARLSPCRS*SELLFK Trigger: TTTGAAAAGAAGCTCTGACAAGGACCTACAAGGACT...TAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATTCAGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | GAGATCGCTTTGTCAACGACTTCAATTAAAGGAGCCACTTTGAAGTCTTTGCTGGTAGTCATTGTGTCCTaGAATGCTTCTCTTAAAGAA | + |
Preference number: 5 (lower is better) Translates to: EIALSTTSIKGATLKSLLVVIVS*NASLKE Trigger: TTCTTTAAGAGAAGCATTCAAGGACACAATGACTAC...CAGCAAAGACTTCAAAGTGGCTCCTTTAATTGAAGTCGTTGACAAAGCGATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | ACTCCATTGAGATATACCTCCAAGACATACACTCACCCACTTAAGGAACAGAATGTAGTCATTGTGTCCTaGAATGCTTCTCTTAAAGAA | + |
Preference number: 5 (lower is better) Translates to: TPLRYTSKTYTHPLKEQNVVIVS*NASLKE Trigger: TTCTTTAAGAGAAGCATTCAAGGACACAATGACTAC...ATTCTGTTCCTTAAGTGGGTGAGTGTATGTCTTGGAGGTATATCTCAATGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | AATTACACAAGATACGTTCAATGTACTCATTCCTGTCCAGCAAGATTAATGTGTTCCCTATCTGCTAGGTaGGTCAATAAGCCCATCATT | + |
Preference number: 5 (lower is better) Translates to: NYTRYVQCTHSCPARLMCSLSAR*VNKPII Trigger: AATGATGGGCTTATTGACCAACCTAGCAGATAGGGA...ACACATTAATCTTGCTGGACAGGAATGAGTACATTGAACGTATCTTGTGTAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | TCCTTTTCTGTGTGCATCACATATTCCTATAGGGGCTCAAGATTTCCCTTTAATAGCAAAATGATGGATTaGAGGCACACAAACTCTTCT | + |
Preference number: 5 (lower is better) Translates to: SFSVCITYSYRGSRFPFNSKMMD*RHTNSS Trigger: AGAAGAGTTTGTGTGCCTCAAATCCATCATTTTGCT...ATTAAAGGGAAATCTTGAGCCCCTATAGGAATATGTGATGCACACAGAAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS-3UTR CAA 90 bp | ATCCACTTTCCATTTGTGGTTCTTGAACAGCATCTTTTGTTTGAGAGGATCACTACAGGTTGGTTTTTCTaGTACCCTGGTTGCATTTTT | + |
Preference number: 5 (lower is better) Translates to: IHFPFVVLEQHLLFERITTGWFF*YPGCIF Trigger: AAAAATGCAACCAGGGTACAAGAAAAACCAACCTGT...AGTGATCCTCTCAAACAAAAGATGCTGTTCAAGAACCACAAATGGAAAGTGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS-3UTR CAA 90 bp | CAGCTGTCTGATGTTCTTTGCCCATTTCAAACTTATTATCATAGCATGAATACAGTAGTCATTGTGTCCTaGAATGCTTCTCTTAAAGAA | + |
Preference number: 5 (lower is better) Translates to: QLSDVLCPFQTYYHSMNTVVIVS*NASLKE Trigger: TTCTTTAAGAGAAGCATTCAAGGACACAATGACTAC...TGTATTCATGCTATGATAATAAGTTTGAAATGGGCAAAGAACATCAGACAGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105590.8 |
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CDS CCA 72 bp | AGGCGGGAGGGCCGGTGTCGCGCACGGCGTAGGCGCTaGGCTCGTTCTCCAGGTAGTAGGGCACCTGCTGGC | + |
Preference number: 6 (lower is better) Translates to: RREGRCRARRRR*ARSPGSRAPAG Trigger: GCCAGCAGGTGCCCTACTACCTGGAGAACGAGCCCAGCGCCTACGCCGTGCGCGACACCGGCCCTCCCGCCT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS GCA 72 bp | GCTGGGTCTGGCTGGGCTCCTCTGGGGGCACTCCCATaGGACTGGCTGGGGCATGAAGGCGGTGGGCATCCA | + |
Preference number: 6 (lower is better) Translates to: AGSGWAPLGALP*DWLGHEGGGHP Trigger: TGGATGCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | GCTGGTGGTGGCCAGCTGGGTCTGGCTGGGCTCCTCTaGGGGCACTCCCATGCGACTGGCTGGGGCATGAAG | + |
Preference number: 6 (lower is better) Translates to: AGGGQLGLAGLL*GHSHATGWGMK Trigger: CTTCATGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS GCA 72 bp | ACCTCGCCCAGGGCCCTCTCCATGGGCATCTTGAGCTaGGGGCGGTTGAGGGGCTCCAGCTCGTTCCCTTGG | + |
Preference number: 6 (lower is better) Translates to: TSPRALSMGILS*GRLRGSSSFPW Trigger: CCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCCATGGAGAGGGCCCTGGGCGAGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 90 bp | ACCTCGCCCAGGGCCCTCTCCATGGGCATCTTGAGCTGCGGGCGGTaGAGGGGCTCCAGCTCGTTCCCTTGGATCTGGTGCAGCAAGGCC | + |
Preference number: 6 (lower is better) Translates to: TSPRALSMGILSCGR*RGSSSFPWIWCSKA Trigger: GGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCCATGGAGAGGGCCCTGGGCGAGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | GCTGGGCTCCTCTGGGGGCACTCCCATGCGACTGGCTaGGGCATGAAGGCGGTGGGCATCCAACATCTCCAG | + |
Preference number: 6 (lower is better) Translates to: AGLLWGHSHATG*GMKAVGIQHLQ Trigger: CTGGAGATGTTGGATGCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | TGTGCTGAAGTGGAGCTGGTGGTGGCCAGCTGGGTCTaGCTGGGCTCCTCTGGGGGCACTCCCATGCGACTG | + |
Preference number: 6 (lower is better) Translates to: CAEVELVVASWV*LGSSGGTPMRL Trigger: CAGTCGCATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 72 bp | TCCTCTGGGGGCACTCCCATGCGACTGGCTGGGGCATaGAGGCGGTGGGCATCCAACATCTCCAGGAGCAGG | + |
Preference number: 6 (lower is better) Translates to: SSGGTPMRLAGA*RRWASNISRSR Trigger: CCTGCTCCTGGAGATGTTGGATGCCCACCGCCTTCATGCCCCAGCCAGTCGCATGGGAGTGCCCCCAGAGGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 72 bp | AGGGCCCTCTCCATGGGCATCTTGAGCTGCGGGCGGTaGAGGGGCTCCAGCTCGTTCCCTTGGATCTGGTGC | + |
Preference number: 6 (lower is better) Translates to: RALSMGILSCGR*RGSSSFPWIWC Trigger: GCACCAGATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCCATGGAGAGGGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 72 bp | ACGTATACCTCGCCCAGGGCCCTCTCCATGGGCATCTaGAGCTGCGGGCGGTTGAGGGGCTCCAGCTCGTTC | + |
Preference number: 6 (lower is better) Translates to: TYTSPRALSMGI*SCGRLRGSSSF Trigger: GAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCCATGGAGAGGGCCCTGGGCGAGGTATACGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | AGCTGCGGGCGGTTGAGGGGCTCCAGCTCGTTCCCTTaGATCTGGTGCAGCAAGGCCATTCCCGAGGCTTTG | + |
Preference number: 6 (lower is better) Translates to: SCGRLRGSSSFP*IWCSKAIPEAL Trigger: CAAAGCCTCGGGAATGGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | AAGGAATGTGCTGAAGTGGAGCTGGTGGTGGCCAGCTaGGTCTGGCTGGGCTCCTCTGGGGGCACTCCCATG | + |
Preference number: 6 (lower is better) Translates to: KECAEVELVVAS*VWLGSSGGTPM Trigger: CATGGGAGTGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 72 bp | GAGCTGCGGGCGGTTGAGGGGCTCCAGCTCGTTCCCTaGGATCTGGTGCAGCAAGGCCATTCCCGAGGCTTT | + |
Preference number: 6 (lower is better) Translates to: ELRAVEGLQLVP*DLVQQGHSRGF Trigger: AAAGCCTCGGGAATGGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 90 bp | CTGTTGTCCACGTATACCTCGCCCAGGGCCCTCTCCATGGGCATCTaGAGCTGCGGGCGGTTGAGGGGCTCCAGCTCGTTCCCTTGGATC | + |
Preference number: 6 (lower is better) Translates to: LLSTYTSPRALSMGI*SCGRLRGSSSFPWI Trigger: GATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCCATGGAGAGGGCCCTGGGCGAGGTATACGTGGACAACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 90 bp | GGGCATCTTGAGCTGCGGGCGGTTGAGGGGCTCCAGCTCGTTCCCTaGGATCTGGTGCAGCAAGGCCATTCCCGAGGCTTTGGTGTGAAG | + |
Preference number: 6 (lower is better) Translates to: GHLELRAVEGLQLVP*DLVQQGHSRGFGVK Trigger: CTTCACACCAAAGCCTCGGGAATGGCCTTGCTGCACCAGATCCAAGGGAACGAGCTGGAGCCCCTCAACCGCCCGCAGCTCAAGATGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | AGGTTTGTAAGGAATGTGCTGAAGTGGAGCTGGTGGTaGCCAGCTGGGTCTGGCTGGGCTCCTCTGGGGGCA | + |
Preference number: 6 (lower is better) Translates to: RFVRNVLKWSWW*PAGSGWAPLGA Trigger: TGCCCCCAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTTACAAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | TGTAGTAGGTTTGTAAGGAATGTGCTGAAGTGGAGCTaGTGGTGGCCAGCTGGGTCTGGCTGGGCTCCTCTG | + |
Preference number: 6 (lower is better) Translates to: CSRFVRNVLKWS*WWPAGSGWAPL Trigger: CAGAGGAGCCCAGCCAGACCCAGCTGGCCACCACCAGCTCCACTTCAGCACATTCCTTACAAACCTACTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 72 bp | GCACCCATTTCATTTCGGCCTTCCAAGTCATCTCTCTaGCGCTTGTGCTTCAACATTCTCCCTCCTCGGCGG | + |
Preference number: 6 (lower is better) Translates to: APISFRPSKSSL*RLCFNILPPRR Trigger: CCGCCGAGGAGGGAGAATGTTGAAGCACAAGCGTCAGAGAGATGACTTGGAAGGCCGAAATGAAATGGGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 72 bp | AGGGCTTGGCCAAAGGTTGGCAGCCCTCATGTCTCCTaGAGCACCCATTTCATTTCGGCCTTCCAAGTCATC | + |
Preference number: 6 (lower is better) Translates to: RAWPKVGSPHVS*STHFISAFQVI Trigger: GATGACTTGGAAGGCCGAAATGAAATGGGTGCTTCAGGAGACATGAGGGCTGCCAACCTTTGGCCAAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 72 bp | GGCCAGCTTTGGCCATCAGGTGGATCAAAGTGTCTGTaGTCTTGTCCAGGACACGGTGGATGTGGTCCTTCT | + |
Preference number: 6 (lower is better) Translates to: GQLWPSGGSKCL*SCPGHGGCGPS Trigger: AGAAGGACCACATCCACCGTGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAAGCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 90 bp | GTCAGGCCAGCTTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTaGTCCAGGACACGGTGGATGTGGTCCTTCTCTTCCAGAGACTTC | + |
Preference number: 6 (lower is better) Translates to: VRPALAIRWIKVSVI*SRTRWMWSFSSRDF Trigger: GAAGTCTCTGGAAGAGAAGGACCACATCCACCGTGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAAGCTGGCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 72 bp | TGCCTTTGTTACTCATGTGCCGGATATGGGAAAGAATaGGAAGGAGCTGAGCTAGGCGGCGATGCTGCTGCT | + |
Preference number: 6 (lower is better) Translates to: CLCYSCAGYGKE*EGAELGGDAAA Trigger: AGCAGCAGCATCGCCGCCTAGCTCAGCTCCTTCTCATTCTTTCCCATATCCGGCACATGAGTAACAAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | CTGGGGATGGGACTAGTATCACATGGCAGGCTCTCTTaGCCTTGGTTAGAGAGTGCAGACTACAGGTTGGTT | + |
Preference number: 6 (lower is better) Translates to: LGMGLVSHGRLS*PWLESADYRLV Trigger: AACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATCCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS CAA 72 bp | GCTTTGGCCATCAGGTGGATCAAAGTGTCTGTGATCTaGTCCAGGACACGGTGGATGTGGTCCTTCTCTTCC | + |
Preference number: 6 (lower is better) Translates to: ALAIRWIKVSVI*SRTRWMWSFSS Trigger: GGAAGAGAAGGACCACATCCACCGTGTCCTGGACAAGATCACAGACACTTTGATCCACCTGATGGCCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 72 bp | TCTGGGGATGGGACTAGTATCACATGGCAGGCTCTCTaGGCCTTGGTTAGAGAGTGCAGACTACAGGTTGGT | + |
Preference number: 6 (lower is better) Translates to: SGDGTSITWQAL*ALVRECRLQVG Trigger: ACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATCCCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS TCA 72 bp | TCAAGTCCCCAAAGCCTGGCACTCTCTTTGCCCAGTTaGTCATATGAACCAGCTCCCTATCTGCTAGGTTGG | + |
Preference number: 6 (lower is better) Translates to: SSPQSLALSLPS*SYEPAPYLLGW Trigger: CCAACCTAGCAGATAGGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS TCA 72 bp | CTCTTCTCCCTGCAGGTTCATCATGCGGAACCGACTTaGCGTAGCCAGCAACATGTCAAAGATCTCCACCAT | + |
Preference number: 6 (lower is better) Translates to: LFSLQVHHAEPT*RSQQHVKDLHH Trigger: ATGGTGGAGATCTTTGACATGTTGCTGGCTACGTCAAGTCGGTTCCGCATGATGAACCTGCAGGGAGAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | ACATTTCTGGACTCTGGGGATGGGACTAGTATCACATaGCAGGCTCTCTTGGCCTTGGTTAGAGAGTGCAGA | + |
Preference number: 6 (lower is better) Translates to: TFLDSGDGTSIT*QALLALVRECR Trigger: TCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATCCCCAGAGTCCAGAAATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS GCA 72 bp | ATGGAGATTCAAGTCCCCAAAGCCTGGCACTCTCTTTaGCCAGTTGATCATATGAACCAGCTCCCTATCTGC | + |
Preference number: 6 (lower is better) Translates to: MEIQVPKAWHSL*PVDHMNQLPIC Trigger: GCAGATAGGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAGTGCCAGGCTTTGGGGACTTGAATCTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CCA 72 bp | TGGATCAAAGTGTCTGTGATCTTGTCCAGGACACGGTaGATGTGGTCCTTCTCTTCCAGAGACTTCAAGGTG | + |
Preference number: 6 (lower is better) Translates to: WIKVSVILSRTR*MWSFSSRDFKV Trigger: CACCTTGAAGTCTCTGGAAGAGAAGGACCACATCCACCGTGTCCTGGACAAGATCACAGACACTTTGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 90 bp | TTTCTGGACTCTGGGGATGGGACTAGTATCACATGGCAGGCTCTCTaGGCCTTGGTTAGAGAGTGCAGACTACAGGTTGGTTTTTCTTGT | + |
Preference number: 6 (lower is better) Translates to: FLDSGDGTSITWQAL*ALVRECRLQVGFSC Trigger: ACAAGAAAAACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATCCCCAGAGTCCAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS TCA 72 bp | CCAAAGCCTGGCACTCTCTTTGCCCAGTTGATCATATaGACCAGCTCCCTATCTGCTAGGTTGGTCAATAAG | + |
Preference number: 6 (lower is better) Translates to: PKPGTLFAQLII*TSSLSARLVNK Trigger: CTTATTGACCAACCTAGCAGATAGGGAGCTGGTTCATATGATCAACTGGGCAAAGAGAGTGCCAGGCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS GCA 72 bp | AAAATGATGGATTTGAGGCACACAAACTCTTCTCCCTaGAGGTTCATCATGCGGAACCGACTTGACGTAGCC | + |
Preference number: 6 (lower is better) Translates to: KMMDLRHTNSSP*RFIMRNRLDVA Trigger: GGCTACGTCAAGTCGGTTCCGCATGATGAACCTGCAGGGAGAAGAGTTTGTGTGCCTCAAATCCATCATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS GCA 72 bp | ATCACATGGCAGGCTCTCTTGGCCTTGGTTAGAGAGTaGAGACTACAGGTTGGTTTTTCTTGTACCCTGGTT | + |
Preference number: 6 (lower is better) Translates to: ITWQALLALVRE*RLQVGFSCTLV Trigger: AACCAGGGTACAAGAAAAACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS CAA 72 bp | GATGGGACTAGTATCACATGGCAGGCTCTCTTGGCCTaGGTTAGAGAGTGCAGACTACAGGTTGGTTTTTCT | + |
Preference number: 6 (lower is better) Translates to: DGTSITWQALLA*VRECRLQVGFS Trigger: AGAAAAACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS CCA 72 bp | ATGGGACTAGTATCACATGGCAGGCTCTCTTGGCCTTaGTTAGAGAGTGCAGACTACAGGTTGGTTTTTCTT | + |
Preference number: 6 (lower is better) Translates to: MGLVSHGRLSWP*LESADYRLVFL Trigger: AAGAAAAACCAACCTGTAGTCTGCACTCTCTAACCAAGGCCAAGAGAGCCTGCCATGTGATACTAGTCCCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS CAA 72 bp | GTAGTCCATCTTCTGCCTGACATAAAGGAATCCCAGTaGTCTGAAGTCCTTGTAGGTCCTTGTCAGAGCTTC | + |
Preference number: 6 (lower is better) Translates to: VVHLLPDIKESQ*SEVLVGPCQSF Trigger: GAAGCTCTGACAAGGACCTACAAGGACTTCAGACAACTGGGATTCCTTTATGTCAGGCAGAAGATGGACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS CCA 72 bp | CCTCCGGTTCTTGTCAATGGTGCATTGGTTTGTAGCTaGACACATGTAGTCATTGTGTCCTTGAATGCTTCT | + |
Preference number: 6 (lower is better) Translates to: PPVLVNGALVCS*THVVIVSLNAS Trigger: AGAAGCATTCAAGGACACAATGACTACATGTGTCCAGCTACAAACCAATGCACCATTGACAAGAACCGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000067086.14 ENSMUST00000105588.8 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 72 bp | AACGTGTACACTCCGGAATTAAGCAAAATGATGGATTaGAGGCACACAAACTCTTCTCCCTGCAGGTTCATC | + |
Preference number: 6 (lower is better) Translates to: NVYTPELSKMMD*RHTNSSPCRFI Trigger: GATGAACCTGCAGGGAGAAGAGTTTGTGTGCCTCAAATCCATCATTTTGCTTAATTCCGGAGTGTACACGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |
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CDS CAA 72 bp | CCTTGTAGGTCCTTGTCAGAGCTTCTTTTCAAAGTCTaGACAGAATGTTCTCTGTCCAGGAGCAAGTTAGGA | + |
Preference number: 6 (lower is better) Translates to: PCRSLSELLFKV*TECSLSRSKLG Trigger: TCCTAACTTGCTCCTGGACAGAGAACATTCTGTCAAGACTTTGAAAAGAAGCTCTGACAAGGACCTACAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105588.8 |
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CDS GCA 72 bp | CAACGTTCTTGCATTTCATGTTGTAGAGATGCTCCATaGCTTTGTTACTCATGTGCCGGATATGGGAAAGAA | + |
Preference number: 6 (lower is better) Translates to: QRSCISCCRDAP*LCYSCAGYGKE Trigger: TTCTTTCCCATATCCGGCACATGAGTAACAAAGGCATGGAGCATCTCTACAACATGAAATGCAAGAACGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067086.14 ENSMUST00000105589.2 ENSMUST00000105590.8 |