Pregenerated sensors for ESPNL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049515Ensembl transcript IDs: ENSMUST00000088904.10, ENSMUST00000176156.2
Found 274 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCAGAAAAGGAGGATTCACCCCACCATCTCAGAGCAGGTCCCAGGTaGGCCCAGGCTGGAGGCAACTTGGAGCCAGGACCTGTACCACTG | + |
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Preference number: 1 (lower is better) Translates to: AEKEDSPHHLRAGPR*AQAGGNLEPGPVPL Trigger: CAGTGGTACAGGTCCTGGCTCCAAGTTGCCTCCAGCCTGGGCCCACCTGGGACCTGCTCTGAGATGGTGGGGTGAATCCTCCTTTTCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR GCA 90 bp | GCAGCTATGCTGACCAGCAGGAGAATCGGGGCAGGGCCACTTGTCTaGCTTGAGGCTTTGGGGTCTCAGAAGCTCTCCTGTCAGGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: AAMLTSRRIGAGPLV*LEALGSQKLSCQGD Trigger: ATCTCCCTGACAGGAGAGCTTCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGATTCTCCTGCTGGTCAGCATAGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 90 bp | CCAGCAGGAGAATCGGGGCAGGGCCACTTGTCTGCCTTGAGGCTTTaGGGTCTCAGAAGCTCTCCTGTCAGGGAGATTGGTCACTCTAGA | + |
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Preference number: 1 (lower is better) Translates to: PAGESGQGHLSALRL*GLRSSPVREIGHSR Trigger: TCTAGAGTGACCAATCTCCCTGACAGGAGAGCTTCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGATTCTCCTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 90 bp | AAGTCCTCCATGGATTCCAGGCCAGTTCTCCTGGCCCCCATAAGGTaGGTGGTGACTCATCCTTCTGTCTGTCACCAGAAGCGGGAATCA | + |
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Preference number: 1 (lower is better) Translates to: KSSMDSRPVLLAPIR*VVTHPSVCHQKRES Trigger: TGATTCCCGCTTCTGGTGACAGACAGAAGGATGAGTCACCACCCACCTTATGGGGGCCAGGAGAACTGGCCTGGAATCCATGGAGGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR TCA 90 bp | CCTTTCTCTGTGCCCAAGTGGGAAGGTGACACCCAGATGTCCACATaGACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: PFSVPKWEGDTQMST*TPLLCLPLAVSCSQ Trigger: CTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACTTGGGCACAGAGAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR GCA 90 bp | GCTGCCCAGCACAGGTGGCTCATTCTGAGATATTTCCCCATTTTGTaGGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTATGGCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: AAQHRWLILRYFPIL*VSLGCSWSWRLWPS Trigger: AGAAGGCCATAAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTCAGAATGAGCCACCTGTGCTGGGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR GCA 90 bp | GAAGACAAAGGCCTAACAGAGAGCTTTCCTTCAGGGTCCAGGCAGTaGCAGAGAAGAGATGCTGCTAGCATTCATACCATAGCAGCTATG | + |
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Preference number: 1 (lower is better) Translates to: EDKGLTESFPSGSRQ*QRRDAASIHTIAAM Trigger: CATAGCTGCTATGGTATGAATGCTAGCAGCATCTCTTCTCTGGCACTGCCTGGACCCTGAAGGAAAGCTCTCTGTTAGGCCTTTGTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 90 bp | CCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTATaGCCTTCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAA | + |
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Preference number: 1 (lower is better) Translates to: PILCVSLGCSWSWRL*PSFRNQAWSLNGDK Trigger: TTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGAAGGCCATAAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 90 bp | CTCACAAGTGAGAAGGATTTGATCCCAGTCACTGCTCAGAAGAGATaGGCACCAAGGCCTAAGAGACCTCTGATCTCTATGAAGACAGAC | + |
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Preference number: 1 (lower is better) Translates to: LTSEKDLIPVTAQKR*APRPKRPLISMKTD Trigger: GTCTGTCTTCATAGAGATCAGAGGTCTCTTAGGCCTTGGTGCCCATCTCTTCTGAGCAGTGACTGGGATCAAATCCTTCTCACTTGTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTAGAGCAGGTCCCAGGTaGGCCCAGGCTGGAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPRAGPR*AQAGGN Trigger: GTTGCCTCCAGCCTGGGCCCACCTGGGACCTGCTCT...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CAA 90 bp | CCCAGGCTGGAGGCAACTTGGAGCCAGGACCTGTACCACTGCCCTTaGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCAACTTTA | + |
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Preference number: 2 (lower is better) Translates to: PRLEATWSQDLYHCP*WLPQHQNPCPVPTL Trigger: TAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGGTCCTGGCTCCAAGTTGCCTCCAGCCTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR GCA 90 bp | GGACCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGGCCTGTCCCCACTGTaGATGGCTTTGCCCCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: GPVPLPFVAPPAPKPMPCGLSPL*MALPLR Trigger: TCTTAGGGGCAAAGCCATGCACAGTGGGGACAGGCC...ACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCCCTCTCTAGCACCTGGCTCCTGTGGCTCTCTATGGTACCTGGAATCCCTTAGGGACCTCCTGTaGCCCAGCCACGGCCTCCAT | + |
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Preference number: 2 (lower is better) Translates to: RDPSLAPGSCGSLWYLESLRDLL*PSHGLH Trigger: ATGGAGGCCGTGGCTGGGCCACAGGAGGTCCCTAAG...GGATTCCAGGTACCATAGAGAGCCACAGGAGCCAGGTGCTAGAGAGGGATCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCCCCCAAAGTCCTCCATaGATTCCAGGCCAGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAPQSPP*IPGQFS Trigger: GGAGAACTGGCCTGGAATCCATGGAGGACTTTGGGG...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCACCCATACGACCACTTaGGGGTCTGAGGGCTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPTHTTT*GSEGCA Trigger: AGCACAGCCCTCAGACCCTCAAGTGGTCGTATGGGT...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTGCTGTTCCCAGCTTCTaGAGGCCAGTTTCCCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPAVPSF*RPVSLQ Trigger: CTGGAGGGAAACTGGCCTTCAGAAGCTGGGAACAGC...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCACAGAACCAGCTCCTTaGCTGCAGGACCCTCAGACC | + |
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Preference number: 2 (lower is better) Translates to: PAPKPMPCANFISLEVPVTEPAP*LQDPQT Trigger: GGTCTGAGGGTCCTGCAGCCAAGGAGCTGGTTCTGT...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | GGACCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTTTACAGTCAGCAATCTaGGGGTGGGGAGGGATCCCT | + |
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Preference number: 2 (lower is better) Translates to: GPVPLPFVAPPAPKPMPCLQSAI*GWGGIP Trigger: AGGGATCCCTCCCCACCCCCAGATTGCTGACTGTAA...ACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGGTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCACCCAGATGTCCACATaGACACCCCTGCTATGTTTG | + |
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Preference number: 2 (lower is better) Translates to: PVPLPFVAPPAPKPMPCATQMST*TPLLCL Trigger: CAAACATAGCAGGGGTGTTCATGTGGACATCTGGGT...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR GCA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCTCAGGGTCCAGGCAGTaGCAGAGAAGAGATGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PLVVMRGHCRRLLEMACPSGSRQ*QRRDAA Trigger: AGCAGCATCTCTTCTCTGGCACTGCCTGGACCCTGA...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCCACCCATGTGACAGCTaGAAACAGAACCAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAHPCDS*KQNQLL Trigger: AAGGAGCTGGTTCTGTTTCCAGCTGTCACATGGGTG...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCTTGCTGGACCACTTGAGGGTCTaGGGGCTGTGCTCACAAGTG | + |
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Preference number: 2 (lower is better) Translates to: KVTPRCPHEHPCYVCPLLDHLRV*GLCSQV Trigger: CACTTGTGAGCACAGCCCTCAGACCCTCAAGTGGTC...CAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | GAGATATTTCCCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTAGGCAGGCCCAGAGCTaGGGCCCAAAGGGAGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: EIFPHFVRILRLFLELALRQAQS*GPKGGV Trigger: TACACCTCCCTTTGGGCCTCAGCTCTGGGCCTGCCT...AAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCACTGCTCAGAAGAGATaGGCACCAAGGCCTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: PAPKPMPCANFISLEVPVTAQKR*APRPKR Trigger: TCTCTTAGGCCTTGGTGCCCATCTCTTCTGAGCAGT...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTGGCACTTGCTTTTGCTaGTGTGTGGGTATTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPGTCFC*CVGIVV Trigger: CACCACAATACCCACACACCAGCAAAAGCAAGTGCC...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCAAACTGACACCCATGTaGCAGCTGGAAACAGAACCA | + |
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Preference number: 2 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPKLTPM*QLETEP Trigger: TGGTTCTGTTTCCAGCTGTCACATGGGTGTCAGTTT...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR GCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTCAGATCCCTGTCCCATaGCAGTTGTATTCTCCTCAA | + |
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Preference number: 2 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPQIPVP*QLYSPQ Trigger: TTGAGGAGAATACAACTGGCATGGGACAGGGATCTG...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CAA 90 bp | CTTTATCTCCCTGGAGGTCCCCGTCTATGGGACCCTTACATAGTCTaGAGTCTGTATAGACTGCCTTTCTACTGTCATCCCAGAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: LYLPGGPRLWDPYIV*SLYRLPFYCHPRAQ Trigger: TTGGGCTCTGGGATGACAGTAGAAAGGCAGTCTATACAGACTCAAGACTATGTAAGGGTCCCATAGACGGGGACCTCCAGGGAGATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | GAGATATTTCCCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTGTAGCTGAGACCACCTaGGCCATTAAAACTGACACC | + |
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Preference number: 2 (lower is better) Translates to: EIFPHFVRILRLFLELALVAETT*AIKTDT Trigger: GGTGTCAGTTTTAATGGCTCAGGTGGTCTCAGCTAC...AAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCTTCTCTGTGCCCAAGTaGGAAGGTGACACCCAGATG | + |
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Preference number: 2 (lower is better) Translates to: SCILLKKSLPQSPPWIPGFSVPK*EGDTQM Trigger: CATCTGGGTGTCACCTTCCCACTTGGGCACAGAGAA...GCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATACAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTCTGAAGGCCAGTTTCCCTCCAGAGGATACCAACCTTTCTATTCAAAGGGTCAAGTGAGAAGGATTTaGTCCCAGTCACTGCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: ASEGQFPSRGYQPFYSKGQVRRI*SQSLLR Trigger: TCTGAGCAGTGACTGGGATCAAATCCTTCTCACTTG...ACCCTTTGAATAGAAAGGTTGGTATCCTCTGGAGGGAAACTGGCCTTCAGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTAGGCTGGAGGCAACTTaGAGCCAGGACCTGTACCAC | + |
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Preference number: 2 (lower is better) Translates to: AVISPRIDSKCEFTKLKCRLEAT*SQDLYH Trigger: GTGGTACAGGTCCTGGCTCCAAGTTGCCTCCAGCCT...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CAA 90 bp | TCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTaGCCCTTTCAACTAGGATCTCAAAATGACAGATTTCTTCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: SESGLVLKWRQMGFL*PFQLGSQNDRFLPR Trigger: CCTTGGAAGAAATCTGTCATTTTGAGATCCTAGTTGAAAGGGCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR TCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCCCCAAGTCACTGTTTTaGTCACTTGATGGTGAATCA | + |
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Preference number: 2 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCPKSLF*SLDGES Trigger: TGATTCACCATCAAGTGATCAAAACAGTGACTTGGG...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTTCCTGTGGCTCTCTATaGTACCTGGAATCCCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: AVISPRIDSKCEFTKLKCSCGSL*YLESPR Trigger: CCTTGGGGATTCCAGGTACCATAGAGAGCCACAGGA...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 72 bp | GAGCAGGTCCCAGGTGGGCCCAGGCTGGAGGCAACTTaGAGCCAGGACCTGTACCACTGCCCTTTGTGGCTC | + |
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Preference number: 3 (lower is better) Translates to: EQVPGGPRLEAT*SQDLYHCPLWL Trigger: GAGCCACAAAGGGCAGTGGTACAGGTCCTGGCTCCAAGTTGCCTCCAGCCTGGGCCCACCTGGGACCTGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CAA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCCACTGTAGGAGACTCTaGGAGATGGCCTGTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAHCRRL*EMACPH Trigger: GTGGGGACAGGCCATCTCCAAGAGTCTCCTACAGTG...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR TCA 72 bp | CAGCAGGAGAATCGGGGCAGGGCCACTTGTCTGCCTTaGGGCTTTGGGGTCTCAGAAGCTCTCCTGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QQENRGRATCLP*GFGVSEALLSG Trigger: CCCTGACAGGAGAGCTTCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGATTCTCCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 72 bp | GCAACTTGGAGCCAGGACCTGTACCACTGCCCTTTGTaGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: ATWSQDLYHCPL*LPQHQNPCPVP Trigger: TGGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGGTCCTGGCTCCAAGTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR GCA 72 bp | CTGACCAGCAGGAGAATCGGGGCAGGGCCACTTGTCTaGCTTGAGGCTTTGGGGTCTCAGAAGCTCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LTSRRIGAGPLV*LEALGSQKLSC Trigger: ACAGGAGAGCTTCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGATTCTCCTGCTGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR TCA 72 bp | TGGACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTaGCACCAGGCACAGCTCCTATTCACGGGCTTTCGG | + |
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Preference number: 3 (lower is better) Translates to: WTWRYLPSQGWR*HQAQLLFTGFR Trigger: CCGAAAGCCCGTGAATAGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 72 bp | GAATCGGGGCAGGGCCACTTGTCTGCCTTGAGGCTTTaGGGTCTCAGAAGCTCTCCTGTCAGGGAGATTGGT | + |
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Preference number: 3 (lower is better) Translates to: ESGQGHLSALRL*GLRSSPVREIG Trigger: ACCAATCTCCCTGACAGGAGAGCTTCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 72 bp | TCACCTCTTGGTATCCTTGCTCTTAGGGACCTCCTGTaGCCCAGCCACGGCCTCCATCTGAGGGTCTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: SPLGILALRDLL*PSHGLHLRVLE Trigger: TTCCAAGACCCTCAGATGGAGGCCGTGGCTGGGCCACAGGAGGTCCCTAAGAGCAAGGATACCAAGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CCA 72 bp | GGTGGGGAGGGATCCCTCTCTAGCACCTGGCTCCTGTaGCTCTCTATGGTACCTGGAATCCCCAAGGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: GGEGSLSSTWLL*LSMVPGIPKVF Trigger: AAACACCTTGGGGATTCCAGGTACCATAGAGAGCCACAGGAGCCAGGTGCTAGAGAGGGATCCCTCCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CAA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCCACCTCTTGGTATCCTaGCTCTTAGGGACCTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: PLVVMRGHCRRLLEMACPHLLVS*LLGTSC Trigger: ACAGGAGGTCCCTAAGAGCAAGGATACCAAGAGGTG...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CAA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTAGGGTTCCTCACCTCTaGGTATCCTTGCTCTTAGGG | + |
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Preference number: 3 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPRVPHL*VSLLLG Trigger: CCCTAAGAGCAAGGATACCAAGAGGTGAGGAACCCT...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR-3UTR CAA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCACACCCCTGCTATGTTaGCCCCTTGCTGTAAGCTGT | + |
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Preference number: 3 (lower is better) Translates to: PAPKPMPCANFISLEVPVTPLLC*PLAVSC Trigger: ACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGT...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR GCA 72 bp | CCATGTGACAGCTGGAAACAGAACCAGCTCCTTGGCTaGAGGACCCTCAGACCCATACGACCACTTGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PCDSWKQNQLLG*RTLRPIRPLEG Trigger: ACCCTCAAGTGGTCGTATGGGTCTGAGGGTCCTGCAGCCAAGGAGCTGGTTCTGTTTCCAGCTGTCACATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGCAGAGGAAGCCAAAGGCAGAAAAGGAGGATTCACCCCACCATCTCAGAGCAAACAGAACCAGCTCCTaGGCTGCAGGACCCTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: RQRKPKAEKEDSPHHLRANRTSS*AAGPSD Trigger: GTCTGAGGGTCCTGCAGCCAAGGAGCTGGTTCTGTT...TGCTCTGAGATGGTGGGGTGAATCCTCCTTTTCTGCCTTTGGCTTCCTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR TCA 72 bp | GTGCCCAAGTGGGAAGGTGACACCCAGATGTCCACATaGACACCCCTGCTATGTTTGCCCCTTGCTGTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VPKWEGDTQMST*TPLLCLPLAVS Trigger: GCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACTTGGGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CCA 72 bp | ATGGATTCCAGGCCAGTTCTCCTGGCCCCCATAAGGTaGGTGGTGACTCATCCTTCTGTCTGTCACCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: MDSRPVLLAPIR*VVTHPSVCHQK Trigger: CTTCTGGTGACAGACAGAAGGATGAGTCACCACCCACCTTATGGGGGCCAGGAGAACTGGCCTGGAATCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGATATTTCCCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTGGCCACTTGTCTGCCTaGAGGCTTTGGGGTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: EIFPHFVRILRLFLELALGHLSA*RLWGLR Trigger: TCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCC...AAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR-3UTR CAA 90 bp | AGTTGTATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCTCGGGGCAGGGCCACTaGTCTGCCTTGAGGCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SCILLKKSLPQSPPWIPGSGQGH*SALRLW Trigger: CCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGA...GCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATACAACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR TCA 72 bp | CTGAGACCACCTGAGCCATTAAAACTGACACCCATGTaGCAGCTGGAAACAGAACCAGCTCCTTGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LRPPEPLKLTPM*QLETEPAPWLQ Trigger: CTGCAGCCAAGGAGCTGGTTCTGTTTCCAGCTGTCACATGGGTGTCAGTTTTAATGGCTCAGGTGGTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CCA 72 bp | CACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTaGAGGTCCCCGTCTATGGGACCCTTACATAGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: HQNPCPVPTLSP*RSPSMGPLHSL Trigger: AAGACTATGTAAGGGTCCCATAGACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR TCA 72 bp | CTCTATGAAGACAGACAGAAGTCAGCCCACTTCACCTaGCCCCCGGGGAGCACAAAGAATGAACAAAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LYEDRQKSAHFT*PPGSTKNEQRN Trigger: GTTCCTTTGTTCATTCTTTGTGCTCCCCGGGGGTCAGGTGAAGTGGGCTGACTTCTGTCTGTCTTCATAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR TCA 72 bp | GTGTTTAACTCCTTTCTCTGTGCCCAAGTGGGAAGGTaGCACCCAGATGTCCACATGAACACCCCTGCTATG | + |
|
Preference number: 3 (lower is better) Translates to: VFNSFLCAQVGR*HPDVHMNTPAM Trigger: CATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACTTGGGCACAGAGAAAGGAGTTAAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR GCA 72 bp | GGCCTAACAGAGAGCTTTCCTTCAGGGTCCAGGCAGTaGCAGAGAAGAGATGCTGCTAGCATTCATACCATA | + |
|
Preference number: 3 (lower is better) Translates to: GLTESFPSGSRQ*QRRDAASIHTI Trigger: TATGGTATGAATGCTAGCAGCATCTCTTCTCTGGCACTGCCTGGACCCTGAAGGAAAGCTCTCTGTTAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR GCA 72 bp | GATGTCCACATGAACACCCCTGCTATGTTTGCCCCTTaGTGTAAGCTGTTCCCAGCTTCTGAAGGCCAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DVHMNTPAMFAP*CKLFPASEGQF Trigger: AAACTGGCCTTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CCA 72 bp | TGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTATaGCCTTCTTTTCGGAATCAGGCCTGGTCCTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CVSLGCSWSWRL*PSFRNQAWSLN Trigger: ATTTAAGGACCAGGCCTGATTCCGAAAAGAAGGCCATAAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR TCA 72 bp | GAGGTCTGCATTTCTATGTCATGTTTAACCATAGGATaGGATAGGGCTGCCCAGCACAGGTGGCTCATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: EVCISMSCLTIG*DRAAQHRWLIL Trigger: CAGAATGAGCCACCTGTGCTGGGCAGCCCTATCTCATCCTATGGTTAAACATGACATAGAAATGCAGACCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CCA 72 bp | GGAGATTGGTTTGAGAACACAGGTTTAAATTTCATCTaGACATGGCGATACCTTCCTTCCCAAGGCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GDWFENTGLNFI*TWRYLPSQGWR Trigger: CCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTCCAGATGAAATTTAAACCTGTGTTCTCAAACCAATCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR GCA 72 bp | CTATTCACGGGCTTTCGGGTCACTTTCCATTTTGGGTaGTGTGATGAAGAGGATCAGCTATGCAGTTATTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFTGFRVTFHFG*CDEEDQLCSYF Trigger: GAAATAACTGCATAGCTGATCCTCTTCATCACAGCACCCAAAATGGAAAGTGACCCGAAAGCCCGTGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CCA 72 bp | ATGGCCTTCTTTTCGGAATCAGGCCTGGTCCTTAAATaGAGACAAATGGGGTTTCTGTTGCCCTTTCAACTA | + |
|
Preference number: 3 (lower is better) Translates to: MAFFSESGLVLK*RQMGFLLPFQL Trigger: TAGTTGAAAGGGCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGAAGGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCACCCGCGCCGGCCTCTaGCGGGGCCTCTTCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLVVMRGHCRRLLEMACPTRAGL*RGLFAA Trigger: AGCTGCGAAGAGGCCCCGTCAGAGGCCGGCGCGGGT...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCGGGGCCCACGCTCCCTaGGGCTCAGCCTCCGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLVVMRGHCRRLLEMACPGAHAP*GSASAA Trigger: AGCTGCGGAGGCTGAGCCGCAGGGAGCGTGGGCCCC...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCGCTCCTTGCGCAAGCTaGCCAGGTCCAGCCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAAPCAS*PGPALD Trigger: GTCCAGGGCTGGACCTGGCCAGCTTGCGCAAGGAGC...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTGGGCCTCTTCGCAGCTaGTGCCCGAGTCGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPGPLRS*CPSRWP Trigger: AGGCCAGCGACTCGGGCATCAGCTGCGAAGAGGCCC...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCGGGGCCCCGTCCACGTaGGGCAAGAACTGCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PLVVMRGHCRRLLEMACPGAPST*GKNCSG Trigger: TCCGGAGCAGTTCTTGCCGCACGTGGACGGGGCCCC...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCCAGCCAGCACAGCTCTaGCAGGTTGCCCGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVVMRGHCRRLLEMACPQPAQL*QVARGC Trigger: GCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTG...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCTCACTCTCATACTCCTaGCAGCGTCGCCGGAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCASLSYS*QRRRSC Trigger: GCAGCTCCGGCGACGCTGCCAGGAGTATGAGAGTGA...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCGCCCGGGGCAGAAAGTaGCTGTTGACGGTGATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAARGRK*LLTVML Trigger: CAGCATCACCGTCAACAGCCACTTTCTGCCCCGGGC...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | GGACCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTACCAGGCGACCGATGTaGCTGCACCAGAAGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVPLPFVAPPAPKPMPCTRRPM*LHQKGS Trigger: GCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGGT...ACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCGTGGCTGCTGCATCGTaGACTGGTGTGGCCCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPVAAAS*TGVAPL Trigger: CAACGGGGCCACACCAGTGCACGATGCAGCAGCCAC...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAGACAGACAGAAGTCAGCCCACTTCACCTGACCCCCGGGGAGCACAAAGAGGCCTGCAGCTGGGCTaGCAGCCGGCCCAACTCACT | + |
|
Preference number: 4 (lower is better) Translates to: MKTDRSQPTSPDPRGAQRGLQLG*QPAQLT Trigger: AGTGAGTTGGGCCGGCTGGCAGCCCAGCTGCAGGCC...TCTTTGTGCTCCCCGGGGGTCAGGTGAAGTGGGCTGACTTCTGTCTGTCTTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTCGGCAATGGTCTCCTTaGCTAGGTCCTGCGGGACCG | + |
|
Preference number: 4 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPRQWSP*LGPAGP Trigger: CGGTCCCGCAGGACCTAGGCAAGGAGACCATTGCCG...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | TTCCAGGCCAGTTCTCCTGGCCCCCATAAGGTGGGTGGTGACTCATCCTTCTGTTGCCGGGCGGGCACGTaGGCCATGATGGCTTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FQASSPGPHKVGGDSSFCCRAGT*AMMAFQ Trigger: CTGGAAAGCCATCATGGCGCACGTGCCCGCCCGGCA...ACAGAAGGATGAGTCACCACCCACCTTATGGGGGCCAGGAGAACTGGCCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCCCGTGTGCGCCCAGATaGTCGAAAACCTCGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAPCAPR*SKTSKH Trigger: GTGCTTCGAGGTTTTCGAGCATCTGGGCGCACACGG...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTCAGGTTCAGGGCCGCTaGCAGGAAGGGAAGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPQVQGR*QEGKHG Trigger: CCCATGCTTCCCTTCCTGGCAGCGGCCCTGAACCTG...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | GAGGCAACTTGGAGCCAGGACCTGTACCACTGCCCTTaGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EATWSQDLYHCP*WLPQHQNPCPV Trigger: CACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGGTCCTGGCTCCAAGTTGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCGTCCTGCGGGACCGGTaGGGGTGGTTTCTCCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGKVTPRCPHEHPCYVCPVLRDR*GWFLLT Trigger: GGTGAGGAGAAACCACCCTCACCGGTCCCGCAGGAC...GGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCACAGCTCTGCCAGGTTaGCCGTGGCTGCTGCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPTALPG*PWLLHR Trigger: ACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGT...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCTGGGAGAGCAGAGTCTaGCAGCACTCCATGTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAWESRV*QHSMCP Trigger: TGGACACATGGAGTGCTGCCAGACTCTGCTCTCCCA...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCCATCCAGCTGCAGAGTaGCTAGGCCAGCACGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPHPAAE*LGQHGS Trigger: ACTCCCGTGCTGGCCTAGCCACTCTGCAGCTGGATG...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCTTCAGTCGCCAGGACTaGAGCTTCCTCGTCTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAFSRQD*SFLVFQ Trigger: CTGGAAGACGAGGAAGCTCCAGTCCTGGCGACTGAA...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | ATGAAGACAGACAGAAGTCAGCCCACTTCACCTGACCCCCGGGGAGCACAAAGACAGGCCAGACTGGGCTaGGAGTTGCAGATGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MKTDRSQPTSPDPRGAQRQARLG*ELQMRG Trigger: GCCCCTCATCTGCAACTCTCAGCCCAGTCTGGCCTG...TCTTTGTGCTCCCCGGGGGTCAGGTGAAGTGGGCTGACTTCTGTCTGTCTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | AGTGGGAAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCTCCACCTCAGGCCCCTaGAGAGCATCTGGGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SGKVTPRCPHEHPCYVCPSTSGP*RASGVV Trigger: CACCACCCCAGATGCTCTTCAGGGGCCTGAGGTGGA...GGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCGGAAGTAGCCAAGCATaGAGAGGTCCAGCGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPGSSQA*RGPARG Trigger: GCCTCTCGCTGGACCTCTTCATGCTTGGCTACTTCC...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCCGAAGAAGCGGGCTTTaGTGTCCTCAAAGCCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPRRSGL*CPQSRR Trigger: CCGACGGCTTTGAGGACATCAAAGCCCGCTTCTTCG...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | GACATGGCGATACCTTCCTTCCCAAGGCTGGAGGTGACACCAGGCACAGCTCCTCCACTTACAGCAGCGTaGTGCAGTGGTAAGGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DMAIPSFPRLEVTPGTAPPLTAA*CSGKAP Trigger: AGGGGCCTTACCACTGCACCACGCTGCTGTAAGTGG...AGGAGCTGTGCCTGGTGTCACCTCCAGCCTTGGGAAGGAAGGTATCGCCATGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCGCAGGCCAGGTAGAGTaGAGAGGCACCACTGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PAPKPMPCANFISLEVPVAGQVE*RGTTAC Trigger: ACATGCAGTGGTGCCTCTCCACTCTACCTGGCCTGC...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | CCTGTACCACTGCCCTTTGTGGCTCCCCCAGCACCAAAACCCATGCCCTGTGCCCAAAGTGCAGGGCAGTaGCTCCTTCATTATCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVPLPFVAPPAPKPMPCAQSAGQ*LLHYPV Trigger: CACGGGATAATGAAGGAGCCACTGCCCTGCACTTTG...GGCACAGGGCATGGGTTTTGGTGCTGGGGGAGCCACAAAGGGCAGTGGTACAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | GACTGCCTTTCTACTGTCATCCCAGAGCCCAAGGTTAGGACTCCCTGCTCCCCCTTGAAGCTGCTCCCCTaGGAATCAGACCCCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DCLSTVIPEPKVRTPCSPLKLLP*ESDPSL Trigger: GAGGCTGGGGTCTGATTCCCAGGGGAGCAGCTTCAA...GGGGGAGCAGGGAGTCCTAACCTTGGGCTCTGGGATGACAGTAGAAAGGCAGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | AGTTGTATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCCCAGCCCGGGTGGCATaGTGCACCAGGCCAGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SCILLKKSLPQSPPWIPGPARVA*CTRPAP Trigger: GGGGGCTGGCCTGGTGCATCATGCCACCCGGGCTGG...GCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATACAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | GAGATATTTCCCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTGAGCATCTGGGGTGGTaGCCCTCAGAGGGGCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EIFPHFVRILRLFLELALEHLGW*PSEGPC Trigger: GCACGGCCCCTCTGAGGGTCACCACCCCAGATGCTC...AAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCAGATGTCTCCGCTGTTaGAGCTGCTCCCCTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PAPKPMPCANFISLEVPVRCLRC*SCSPGN Trigger: ATTCCCAGGGGAGCAGCTTCAACAGCGGAGACATCT...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCTTCCAGGGAGAGTTTTaGAGCCAGCAGTGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLVVMRGHCRRLLEMACPFQGEF*SQQWRR Trigger: CCTCCTCCACTGCTGGCTGCAAAACTCTCCCTGGAA...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCTCGGGCAGGAGGGCCTaGAGCTGGGCTGCCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCSGRRA*SWAASR Trigger: CCGGCTGGCAGCCCAGCTGCAGGCCCTCCTGCCCGA...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | AGTGGGAAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCAGCCTCCCAGCCGTGTaGGCCCAGATGCTCGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGKVTPRCPHEHPCYVCPSLPAV*AQMLEN Trigger: GTTTTCGAGCATCTGGGCGCACACGGCTGGGAGGCT...GGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | GATGCTGCTAGCATTCATACCATAGCAGCTATGCTGACCAGCAGGAGAATCGGGGGTGACCAGCCCGGGTaGCATGATGCACCAGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DAASIHTIAAMLTSRRIGGDQPG*HDAPGQ Trigger: CTGGCCTGGTGCATCATGCCACCCGGGCTGGTCACC...CCCGATTCTCCTGCTGGTCAGCATAGCTGCTATGGTATGAATGCTAGCAGCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | AGTGGGAAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCCCCCTGAAGAGCATCTaGGGTGGTGACCCTCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKVTPRCPHEHPCYVCPPLKSI*GGDPQR Trigger: CCTCTGAGGGTCACCACCCCAGATGCTCTTCAGGGG...GGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACT 58% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCGCAGCGGCTGCCCTCTaGGCTCGGCCTTCCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCAAAAL*ARPSPA Trigger: AGCCGGGGAAGGCCGAGCCCAGAGGGCAGCCGCTGC...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCGTCGCCTCGGGGCTGTaGCGGCGCCGACCAGCAACC | + |
|
Preference number: 4 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCVASGL*RRRPAT Trigger: GGTTGCTGGTCGGCGCCGCCACAGCCCCGAGGCGAC...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | AGAATCGGGGCAGGGCCACTTGTCTGCCTTGAGGCTTaGGGGTCTCAGAAGCTCTCCTGTCAGGGAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIGAGPLVCLEA*GSQKLSCQGDW Trigger: CCAATCTCCCTGACAGGAGAGCTTCTGAGACCCCAAAGCCTCAAGGCAGACAAGTGGCCCTGCCCCGATTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAGACAGACAGAAGTCAGCCCACTTCACCTGACCCCCGGGGAGCACAAAGATGTGTGCCTGCTGGTTaGCTGGCAGCTTGGCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MKTDRSQPTSPDPRGAQRCVPAG*LAAWLS Trigger: AGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACA...TCTTTGTGCTCCCCGGGGGTCAGGTGAAGTGGGCTGACTTCTGTCTGTCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | AAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCTTGCTGCCCCGAGCTGCAAAGTaGAGGGCAGTGGCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KVTPRCPHEHPCYVCPLLPRAAK*RAVAPS Trigger: TGAAGGAGCCACTGCCCTGCACTTTGCAGCTCGGGG...CAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCCCCAGGATGGCCTGGTaGGTCTGTGAATATCTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PAPKPMPCANFISLEVPVPRMAW*VCEYLQ Trigger: TTGGAGATATTCACAGACGCACCAGGCCATCCTGGG...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | ATGAACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAGCTTCTGAAGGCGACCGATGTGGCTaGACCAGAAGGGCAGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MNTPAMFAPCCKLFPASEGDRCG*TRRAAA Trigger: AGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCC...TTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | ATGAAGACAGACAGAAGTCAGCCCACTTCACCTGACCCCCGGGGAGCACAAAGATGCCTGCTGGTTGCCTaGCAGCTTGGCTCTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MKTDRSQPTSPDPRGAQRCLLVA*QLGSLY Trigger: GTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCA...TCTTTGTGCTCCCCGGGGGTCAGGTGAAGTGGGCTGACTTCTGTCTGTCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | TATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCCAGTTAGGAGGGCCTGCAGCTaGGCTGCCAGCCGGCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSPQKVTTPKSSMDSRPVRRACS*AASRPN Trigger: GTTGGGCCGGCTGGCAGCCCAGCTGCAGGCCCTCCT...AACTGGCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | GAGATATTTCCCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTCAACCTCTCAGACACTaGCCAGGCCGCACCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: EIFPHFVRILRLFLELALQPLRH*PGRTPS Trigger: GCTGGGGGTGCGGCCTGGCCAGTGTCTGAGAGGTTG...AAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | GACACCCATGTGACAGCTGGAAACAGAACCAGCTCCTaGGCTGCAGGACCCTCAGACCCATACGACCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DTHVTAGNRTSS*AAGPSDPYDHL Trigger: CAAGTGGTCGTATGGGTCTGAGGGTCCTGCAGCCAAGGAGCTGGTTCTGTTTCCAGCTGTCACATGGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | ACTCTTGGAGATGGCCTGTCCCCACTGTGCATGGCTTaGCCCCTAAGAGACTTGACTGCAGATCCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TLGDGLSPLCMA*PLRDLTADPCP Trigger: GGGACAGGGATCTGCAGTCAAGTCTCTTAGGGGCAAAGCCATGCACAGTGGGGACAGGCCATCTCCAAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | AGGGATCCCTCTCTAGCACCTGGCTCCTGTGGCTCTCTATGGTACCTGGAATCCTCTGTACCAGGAACTTaGCACAGTCCAGGTGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RDPSLAPGSCGSLWYLESSVPGT*HSPGDQ Trigger: CTGGTCACCTGGACTGTGTCAAGTTCCTGGTACAGA...GGATTCCAGGTACCATAGAGAGCCACAGGAGCCAGGTGCTAGAGAGGGATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | ATGAACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAGCTTCTGAAGCAGCAGGGACATGCTaGGCACCAGGCGACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: MNTPAMFAPCCKLFPASEAAGTC*APGDRC Trigger: ACATCGGTCGCCTGGTGCGCAGCATGTCCCTGCTGC...TTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | AAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCTTGCTGGGGCCCAGGATGGCCTaGTGCGTCTGTGAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVTPRCPHEHPCYVCPLLGPRMA*CVCEYL Trigger: GAGATATTCACAGACGCACCAGGCCATCCTGGGCCC...CAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | AAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCTTGCTGCAAAGGGGCCCAGGATaGCCTGGTGCGTCTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KVTPRCPHEHPCYVCPLLQRGPG*PGASVN Trigger: ATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTG...CAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | ATGAACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAGCTTCTGAAGGGAGGGGCCGGCAATaGTCTCCTTGCCTAGGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MNTPAMFAPCCKLFPASEGRGRQ*SPCLGP Trigger: AGGACCTAGGCAAGGAGACCATTGCCGGCCCCTCCC...TTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | AGTTGTATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCTCTTGGATCTCGCGCTaGGCCTCGCTCCGGGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCILLKKSLPQSPPWIPGSWISR*ASLREG Trigger: CCCCTCCCGGAGCGAGGCCCAGCGCGAGATCCAAGA...GCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATACAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCCTCCTCTGTGTCGCCTaGCCCGGGCTCCCCACCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCLLCVA*PGLPTH Trigger: ATGGGTGGGGAGCCCGGGCCAGGCGACACAGAGGAG...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCCGCTGCTGCCACAGGTaGCCAAGCCGAGGGCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCRCCHR*PSRGPS Trigger: CGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCG...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| 3UTR CAA 72 bp | CTTTCTATTCAAAGGGTTCCTCACCTCTTGGTATCCTaGCTCTTAGGGACCTCCTGTGGCCCAGCCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSIQRVPHLLVS*LLGTSCGPATA Trigger: GGCCGTGGCTGGGCCACAGGAGGTCCCTAAGAGCAAGGATACCAAGAGGTGAGGAACCCTTTGAATAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | ATGAACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAGCTTCTGAACCGTTGTGTGCCTGCTaGTTGCCTGGCAGCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MNTPAMFAPCCKLFPASEPLCAC*LPGSLA Trigger: AGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGG...TTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | AGTTGTATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCCCACTCCACCAGGGCTaGGTGTCCAAACCGGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SCILLKKSLPQSPPWIPGPLHQG*VSKPGS Trigger: GCTGCCCGGTTTGGACACCCAGCCCTGGTGGAGTGG...GCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATACAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | ATGAAGACAGACAGAAGTCAGCCCACTTCACCTGACCCCCGGGGAGCACAAAGAAACTGGGCACAATCCTaGTGTCCATGGTACTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MKTDRSQPTSPDPRGAQRNWAQS*CPWYSA Trigger: GGCAGAGTACCATGGACACCAGGATTGTGCCCAGTT...TCTTTGTGCTCCCCGGGGGTCAGGTGAAGTGGGCTGACTTCTGTCTGTCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | GAGGGTCTGAGGGCTGTGCTCACAAGTGAGAAGGATTaGATCCCAGTCACTGCTCAGAAGAGATGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: EGLRAVLTSEKD*IPVTAQKRWAP Trigger: TGGTGCCCATCTCTTCTGAGCAGTGACTGGGATCAAATCCTTCTCACTTGTGAGCACAGCCCTCAGACCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | CTGTCCCCACTGTGCATGGCTTTGCCCCTAAGAGACTaGACTGCAGATCCCTGTCCCATGCCAGTTGTATTC | + |
|
Preference number: 4 (lower is better) Translates to: LSPLCMALPLRD*TADPCPMPVVF Trigger: GAATACAACTGGCATGGGACAGGGATCTGCAGTCAAGTCTCTTAGGGGCAAAGCCATGCACAGTGGGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR TCA 90 bp | GCTTCTGAAGGCCAGTTTCCCTCCAGAGGATACCAACCTTTCTATTCAAAGGGTCAGCGGAGAGACACCTaGGGCATCTTGGTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASEGQFPSRGYQPFYSKGQRRDT*GILVLQ Trigger: CTGCAGGACCAAGATGCCTCAGGTGTCTCTCCGCTG...ACCCTTTGAATAGAAAGGTTGGTATCCTCTGGAGGGAAACTGGCCTTCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | TATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCCAGTTTGTGGCCCCGTTGTGTaGCTGCTGGTTGCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YSPQKVTTPKSSMDSRPVCGPVV*LLVAWQ Trigger: CTGCCAGGCAACCAGCAGGCACACAACGGGGCCACA...AACTGGCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | AGGCAGAGGAAGCCAAAGGCAGAAAAGGAGGATTCACCCCACCATCTCAGAGCATTTCTCCTCACCCTGTaGCAGCCCGTTCATACCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RQRKPKAEKEDSPHHLRAFLLTL*QPVHTL Trigger: AAGGGTATGAACGGGCTGGCACAGGGTGAGGAGAAA...TGCTCTGAGATGGTGGGGTGAATCCTCCTTTTCTGCCTTTGGCTTCCTCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGAAGGCCAGTTTCCCTCCAGAGGATACCAACCTTTCTATTCAAAGGGTGTGATGATGCCACGCTaGTGCCACAGGTGGCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASEGQFPSRGYQPFYSKGVMMPR*CHRWPS Trigger: GCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCAC...ACCCTTTGAATAGAAAGGTTGGTATCCTCTGGAGGGAAACTGGCCTTCAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | AAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCTTGCTGTTTTGCAGCCAGCAGTaGAGGAGGTGGAAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KVTPRCPHEHPCYVCPLLFCSQQ*RRWKWW Trigger: CCACCATTTCCACCTCCTCCACTGCTGGCTGCAAAA...CAGCAAGGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | GGCTTTGGGGTCTCAGAAGCTCTCCTGTCAGGGAGATaGGTCACTCTAGACACAGCTCCCTCTGGTTTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFGVSEALLSGR*VTLDTAPSGFR Trigger: TCTAAAACCAGAGGGAGCTGTGTCTAGAGTGACCAATCTCCCTGACAGGAGAGCTTCTGAGACCCCAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | CAGCACAGGTGGCTCATTCTGAGATATTTCCCCATTTaGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QHRWLILRYFPI*CVSLGCSWSWR Trigger: GCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTCAGAATGAGCCACCTGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | GCTTCTGAAGGCCAGTTTCCCTCCAGAGGATACCAACCTTTCTATTCAAAGGGTCGTGCAATGAGCTCATaGCATCCAGGGCTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASEGQFPSRGYQPFYSKGRAMSS*HPGLSG Trigger: GCCTGAGAGCCCTGGATGGCATGAGCTCATTGCACG...ACCCTTTGAATAGAAAGGTTGGTATCCTCTGGAGGGAAACTGGCCTTCAGAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCACCGCAGGTGGCGCATCTTaGGCTCCTCGGCTGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ISPRIDSKCEFTKLKCATAGGAS*APRLAG Trigger: ACCTGCCAGCCGAGGAGCGCAAGATGCGCCACCTGC...GGTGGCACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | ATGAACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAGCTTCTGAAGGTTGCCTGGCAGCTTaGCTCTCTGTACCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: MNTPAMFAPCCKLFPASEGCLAA*LSVPGT Trigger: AGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACC...TTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | TATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCCAGTTAGGAAGGGGTCTACGTaGTGGGAGAGCAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSPQKVTTPKSSMDSRPVRKGST*WESRVW Trigger: CCAGACTCTGCTCTCCCACCACGTAGACCCCTTCCT...AACTGGCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR CCA 90 bp | AGTTGTATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCAGGAGGTGGAAATGGTaGGGGTGGGGGTGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCILLKKSLPQSPPWIPGRRWKW*GWGCHQ Trigger: CTGATGACACCCCCACCCCCACCATTTCCACCTCCT...GCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATACAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| 3UTR CAA 72 bp | CCTGGAGGTCCCCGTCTATGGGACCCTTACATAGTCTaGAGTCTGTATAGACTGCCTTTCTACTGTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGPRLWDPYIV*SLYRLPFYCHP Trigger: GGGATGACAGTAGAAAGGCAGTCTATACAGACTCAAGACTATGTAAGGGTCCCATAGACGGGGACCTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | TATTCTCCTCAAAAAGTCACTACCCCAAAGTCCTCCATGGATTCCAGGCCAGTTTTTCACCAGGAACTGTaGCAGATGCAGGTGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: YSPQKVTTPKSSMDSRPVFHQEL*QMQVAL Trigger: GAGGGCCACCTGCATCTGGCACAGTTCCTGGTGAAA...AACTGGCCTGGAATCCATGGAGGACTTTGGGGTAGTGACTTTTTGAGGAGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
||
| CDS-3UTR GCA 90 bp | ATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCACCATGATGCCACGCTGCTaGCACAGGTGGCCAAGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: ISPRIDSKCEFTKLKCATMMPRC*HRWPSR Trigger: TCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCAT...GGTGGCACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTCTTGCGCTCCTCGGCTaGCAGGTCGCACTCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVISPRIDSKCEFTKLKCLALLG*QVALQE Trigger: CTCCTGGAGTGCGACCTGCCAGCCGAGGAGCGCAAG...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR TCA 90 bp | ATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCACCCCTGAGTCCTGCCTCTaGCTCTGGTCCTGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPRIDSKCEFTKLKCATPESCL*LWSWSS Trigger: AGAAGACCAGGACCAGAGTCAGAGGCAGGACTCAGG...GGTGGCACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR GCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCCCGTTGTGTGCCTaGTGGTTGCCTGGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVISPRIDSKCEFTKLKCAPLCA*WLPGSL Trigger: CAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGC...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR GCA 90 bp | ATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCACCCACCTCGTCGGTCACTaGCTTATGGAAGGCTCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ISPRIDSKCEFTKLKCATHLVGH*LMEGSH Trigger: GTGCGAGCCTTCCATAAGGCAGTGACCGACGAGGTG...GGTGGCACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | TCTTTTCGGAATCAGGCCTGGTCCTTAAATGGAGACAAATGGGGTTTCTGTTGCATAGCCGTTCCAAGGTaGCCATATCCCCATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRNQAWSLNGDKWGFCCIAVPR*PYPHPW Trigger: CCAAGGATGGGGATATGGCCACCTTGGAACGGCTAT...GCAACAGAAACCCCATTTGTCTCCATTTAAGGACCAGGCCTGATTCCGAAAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTTGTGCCAGATGCAGGTaGCCCTCTTGGCAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AVISPRIDSKCEFTKLKCCARCR*PSWQAR Trigger: CCTGGCCTGCCAAGAGGGCCACCTGCATCTGGCACA...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGACACTCCGCACTCTTaGATCTCGCGCTGGGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: AVISPRIDSKCEFTKLKCDTPHS*ISRWAS Trigger: CGAGGCCCAGCGCGAGATCCAAGAGTGCGGAGTGTC...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CCA 90 bp | ATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCACCTCGGTCACTGCCTTATaGAAGGCTCGCACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISPRIDSKCEFTKLKCATSVTAL*KARTAS Trigger: GGAGGCTGTGCGAGCCTTCCATAAGGCAGTGACCGA...GGTGGCACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR GCA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTAGGAACTGTGCCAGATaGAGGTGGCCCTCTTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AVISPRIDSKCEFTKLKCRNCAR*RWPSWQ Trigger: CTGCCAAGAGGGCCACCTGCATCTGGCACAGTTCCT...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS TCA 90 bp | GGCCGGGGGCTACCCGCGGCCTCTGGGCCCCTGGATCGTGCACGCTaGGCCTCCAGGGTCCTGCAGGCTGCCGTCCGGAGCGCGGGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRGLPAASGPLDRAR*ASRVLQAAVRSAGV Trigger: CACGCCCGCGCTCCGGACGGCAGCCTGCAGGACCCTGGAGGCTCAGCGTGCACGATCCAGGGGCCCAGAGGCCGCGGGTAGCCCCCGGCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | TCCGGAGACAGGGGCCCACGCTCCCTGCGGCTCAGCCTCCGCAGCTaGCGGGCGGGCACGTGCGCCATGATGGCTTTCCAGGTGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGDRGPRSLRLSLRS*RAGTCAMMAFQVPS Trigger: GCTGGGCACCTGGAAAGCCATCATGGCGCACGTGCCCGCCCGGCAGCTGCGGAGGCTGAGCCGCAGGGAGCGTGGGCCCCTGTCTCCGGA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | GCCGTCGGTCCAGGCGCGGCGACCCGCGGCCACCTCGTCGGTCACTaGCTTATGGAAGGCTCGCACAGCCTCCCAGCCGTGTGCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AVGPGAATRGHLVGH*LMEGSHSLPAVCAQ Trigger: CTGGGCGCACACGGCTGGGAGGCTGTGCGAGCCTTCCATAAGGCAGTGACCGACGAGGTGGCCGCGGGTCGCCGCGCCTGGACCGACGGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CTCTTCGCAGCTGATGCCCGAGTCGCTGGCCTCCTCTGTGTCGCCTaGCCCGGGCTCCCCACCCATCGCGTCGCCTCGGGGCTGTGGCGG | + |
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Preference number: 5 (lower is better) Translates to: LFAADARVAGLLCVA*PGLPTHRVASGLWR Trigger: CCGCCACAGCCCCGAGGCGACGCGATGGGTGGGGAGCCCGGGCCAGGCGACACAGAGGAGGCCAGCGACTCGGGCATCAGCTGCGAAGAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CAGGTGCCCAGCAGGTGGGTGATGATGCCACGCTGCTGCCACAGGTaGCCAAGCCGAGGGCCATCGCTGGGCTGCGGGGAGGACGGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: QVPSRWVMMPRCCHR*PSRGPSLGCGEDGR Trigger: CCGGCCGTCCTCCCCGCAGCCCAGCGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCACCCACCTGCTGGGCACCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CTGCGCACCAGGCGACCGATGTGGCTGCACCAGAAGGGCAGCGGCTaGCCTCTGGGCTCGGCCTTCCCCGGCTCCTCGGAGGCTTCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRTRRPMWLHQKGSG*PLGSAFPGSSEASS Trigger: ACTCGAAGCCTCCGAGGAGCCGGGGAAGGCCGAGCCCAGAGGGCAGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGGTGCGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | GTCCTGCAGCCCGCAGCCCGCATCACGGACCAGCCAGCACAGCTCTaGCAGGTTGCCCGTGGCTGCTGCATCGTGCACTGGTGTGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLQPAARITDQPAQL*QVARGCCIVHWCGP Trigger: GGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTCCGTGATGCGGGCTGCGGGCTGCAGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CCTTCAGCAGCAGGGACATGCTGCGCACCAGGCGACCGATGTGGCTaGACCAGAAGGGCAGCGGCTGCCCTCTGGGCTCGGCCTTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: PSAAGTCCAPGDRCG*TRRAAAALWARPSP Trigger: CGGGGAAGGCCGAGCCCAGAGGGCAGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGGTGCGCAGCATGTCCCTGCTGCTGAAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CCAGGCGACCGATGTGGCTGCACCAGAAGGGCAGCGGCTGCCCTCTaGGCTCGGCCTTCCCCGGCTCCTCGGAGGCTTCGAGTTCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: PGDRCGCTRRAAAAL*ARPSPAPRRLRVQS Trigger: CGACTGAACTCGAAGCCTCCGAGGAGCCGGGGAAGGCCGAGCCCAGAGGGCAGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CTCGGCGGCACCGCAGGTTCAGGGCCGCTGCCAGGAAGGGAAGCATaGGGCAAGGACCCGAGTGGTGTCAGGCCCAGCTTGCGACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGGTAGSGPLPGREA*GKDPSGVRPSLRPG Trigger: GCCAGGTCGCAAGCTGGGCCTGACACCACTCGGGTCCTTGCCCCATGCTTCCCTTCCTGGCAGCGGCCCTGAACCTGCGGTGCCGCCGAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | GGGAATCAGACCCCAGCCTCGGCGGCACCGCAGGTTCAGGGCCGCTaGCAGGAAGGGAAGCATGGGGCAAGGACCCGAGTGGTGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GNQTPASAAPQVQGR*QEGKHGARTRVVSG Trigger: GCCTGACACCACTCGGGTCCTTGCCCCATGCTTCCCTTCCTGGCAGCGGCCCTGAACCTGCGGTGCCGCCGAGGCTGGGGTCTGATTCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | ATGGCTTTCCAGGTGCCCAGCAGGTGGGTGATGATGCCACGCTGCTaGCACAGGTGGCCAAGCCGAGGGCCATCGCTGGGCTGCGGGGAG | + |
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Preference number: 5 (lower is better) Translates to: MAFQVPSRWVMMPRC*HRWPSRGPSLGCGE Trigger: CTCCCCGCAGCCCAGCGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCACCCACCTGCTGGGCACCTGGAAAGCCAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | ACTGGAGCTTCCTCGTCTTCCAGGCCGGGAGCCCGGGGCAGAAAGTaGCTGTTGACGGTGATGCTGACCAGGGGCTCGGGCAGGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TGASSSSRPGARGRK*LLTVMLTRGSGRRA Trigger: GGCCCTCCTGCCCGAGCCCCTGGTCAGCATCACCGTCAACAGCCACTTTCTGCCCCGGGCTCCCGGCCTGGAAGACGAGGAAGCTCCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | GGCCTTCCCCGGCTCCTCGGAGGCTTCGAGTTCAGTCGCCAGGACTaGAGCTTCCTCGTCTTCCAGGCCGGGAGCCCGGGGCAGAAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GLPRLLGGFEFSRQD*SFLVFQAGSPGQKV Trigger: CACTTTCTGCCCCGGGCTCCCGGCCTGGAAGACGAGGAAGCTCCAGTCCTGGCGACTGAACTCGAAGCCTCCGAGGAGCCGGGGAAGGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | ACCAGCCAGCACAGCTCTGCCAGGTTGCCCGTGGCTGCTGCATCGTaGACTGGTGTGGCCCCGTTGTGTGCCTGCTGGTTGCCTGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: TSQHSSARLPVAAAS*TGVAPLCACWLPGS Trigger: GCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | ATGATGGCTTTCCAGGTGCCCAGCAGGTGGGTGATGATGCCACGCTaGTGCCACAGGTGGCCAAGCCGAGGGCCATCGCTGGGCTGCGGG | + |
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Preference number: 5 (lower is better) Translates to: MMAFQVPSRWVMMPR*CHRWPSRGPSLGCG Trigger: CCCGCAGCCCAGCGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCACCCACCTGCTGGGCACCTGGAAAGCCATCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CCAGCACAGCTCTGCCAGGTTGCCCGTGGCTGCTGCATCGTGCACTaGTGTGGCCCCGTTGTGTGCCTGCTGGTTGCCTGGCAGCTTGGC | + |
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Preference number: 5 (lower is better) Translates to: PAQLCQVARGCCIVH*CGPVVCLLVAWQLG Trigger: GCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | ATACCCTTCAGCAGCAGGGACATGCTGCGCACCAGGCGACCGATGTaGCTGCACCAGAAGGGCAGCGGCTGCCCTCTGGGCTCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPFSSRDMLRTRRPM*LHQKGSGCPLGSAF Trigger: GAAGGCCGAGCCCAGAGGGCAGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGGTGCGCAGCATGTCCCTGCTGCTGAAGGGTAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | ACTCTTGGATCTCGCGCTGGGCCTCGCTCCGGGAGGGGCCGGCAATaGTCTCCTTGCCTAGGTCCTGCGGGACCGGTGAGGGTGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TLGSRAGPRSGRGRQ*SPCLGPAGPVRVVS Trigger: AGAAACCACCCTCACCGGTCCCGCAGGACCTAGGCAAGGAGACCATTGCCGGCCCCTCCCGGAGCGAGGCCCAGCGCGAGATCCAAGAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | ATCACGGACCAGCCAGCACAGCTCTGCCAGGTTGCCCGTGGCTGCTaGATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTGCTGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: ITDQPAQLCQVARGC*IVHWCGPVVCLLVA Trigger: GGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTCCGTGAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CGCATCACGGACCAGCCAGCACAGCTCTGCCAGGTTGCCCGTGGCTaGTGCATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTGCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RITDQPAQLCQVARG*CIVHWCGPVVCLLV Trigger: AACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTCCGTGATGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CACCCTGTGCCAGCCCGTTCATACCCTTCAGCAGCAGGGACATGCTaGGCACCAGGCGACCGATGTGGCTGCACCAGAAGGGCAGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HPVPARSYPSAAGTC*APGDRCGCTRRAAA Trigger: AGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGGTGCGCAGCATGTCCCTGCTGCTGAAGGGTATGAACGGGCTGGCACAGGGTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CCTCACCCTGTGCCAGCCCGTTCATACCCTTCAGCAGCAGGGACATaGTGCGCACCAGGCGACCGATGTGGCTGCACCAGAAGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PHPVPARSYPSAAGT*CAPGDRCGCTRRAA Trigger: CGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCTGGTGCGCAGCATGTCCCTGCTGCTGAAGGGTATGAACGGGCTGGCACAGGGTGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | AGTAACCACTCCACCAGGGCTGGGTGTCCAAACCGGGCAGCCAGGTaGAGCGGAGAGACACCTGAGGCATCTTGGTCCTGCAGCCCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SNHSTRAGCPNRAAR*SGETPEASWSCSPQ Trigger: CTGCGGGCTGCAGGACCAAGATGCCTCAGGTGTCTCTCCGCTGCACCTGGCTGCCCGGTTTGGACACCCAGCCCTGGTGGAGTGGTTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | ACAGCTCTGCCAGGTTGCCCGTGGCTGCTGCATCGTGCACTGGTGTaGCCCCGTTGTGTGCCTGCTGGTTGCCTGGCAGCTTGGCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TALPGCPWLLHRALV*PRCVPAGCLAAWLS Trigger: AGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CAGCAGCGTGGTGCAGTGGTAAGGCCCCTTCCAGCGTCTCCAGTGTaGCTGCATGGCCCTCACGGAGTAACCACTCCACCAGGGCTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: QQRGAVVRPLPASPV*LHGPHGVTTPPGLG Trigger: ACCCAGCCCTGGTGGAGTGGTTACTCCGTGAGGGCCATGCAGCCACACTGGAGACGCTGGAAGGGGCCTTACCACTGCACCACGCTGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 90 bp | GGGCAGATCAGGGGCAAACTCGAAGTTCCCCCGCAATGTCCGAACTaGCACTCCGCACTCTTGGATCTCGCGCTGGGCCTCGCTCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GQIRGKLEVPPQCPN*HSALLDLALGLAPG Trigger: TCCCGGAGCGAGGCCCAGCGCGAGATCCAAGAGTGCGGAGTGTCAGTTCGGACATTGCGGGGGAACTTCGAGTTTGCCCCTGATCTGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | GCCTTATGGAAGGCTCGCACAGCCTCCCAGCCGTGTGCGCCCAGATaGTCGAAAACCTCGAAGCACAGCAGGTGGCGCATCTTGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALWKARTASQPCAPR*SKTSKHSRWRILRS Trigger: GGAGCGCAAGATGCGCCACCTGCTGTGCTTCGAGGTTTTCGAGCATCTGGGCGCACACGGCTGGGAGGCTGTGCGAGCCTTCCATAAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 90 bp | GTGCCTGCTGGTTGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTTaGCACAGTCCAGGTGACCAGCCCGGGTGGCATGATGCACCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPAGCLAAWLSVPGT*HSPGDQPGWHDAPG Trigger: GCCTGGTGCATCATGCCACCCGGGCTGGTCACCTGGACTGTGTCAAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CCCGTGGCTGCTGCATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTaGTGGTTGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: PVAAASCTGVAPLCA*WLPGSLALCTRNLT Trigger: TGTCAAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | GTTGCCCGTGGCTGCTGCATCGTGCACTGGTGTGGCCCCGTTGTGTaGCTGCTGGTTGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: VARGCCIVHWCGPVV*LLVAWQLGSLYQEL Trigger: AAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | GTCGGTCACTGCCTTATGGAAGGCTCGCACAGCCTCCCAGCCGTGTaGGCCCAGATGCTCGAAAACCTCGAAGCACAGCAGGTGGCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VGHCLMEGSHSLPAV*AQMLENLEAQQVAH Trigger: ATGCGCCACCTGCTGTGCTTCGAGGTTTTCGAGCATCTGGGCGCACACGGCTGGGAGGCTGTGCGAGCCTTCCATAAGGCAGTGACCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | TGGTGCAGTGGTAAGGCCCCTTCCAGCGTCTCCAGTGTGGCTGCATaGCCCTCACGGAGTAACCACTCCACCAGGGCTGGGTGTCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WCSGKAPSSVSSVAA*PSRSNHSTRAGCPN Trigger: GTTTGGACACCCAGCCCTGGTGGAGTGGTTACTCCGTGAGGGCCATGCAGCCACACTGGAGACGCTGGAAGGGGCCTTACCACTGCACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | GTGGCTGCTGCATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTGCTaGTTGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTTGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: VAAASCTGVAPLCAC*LPGSLALCTRNLTQ Trigger: CTGTGTCAAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 90 bp | CAGCCCGGGTGGCATGATGCACCAGGCCAGCCCCCAGATCATCAGTaGTGTCTGGTCTTAGGGCACCAGCCTCAAATAGCCGTTCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPGWHDAPGQPPDHQ*CLVLGHQPQIAVPR Trigger: CCTTGGAACGGCTATTTGAGGCTGGTGCCCTAAGACCAGACATCACTGATGATCTGGGGGCTGGCCTGGTGCATCATGCCACCCGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | TCATCCTCCGTCAGCAGCTCTCCAAAGGGGCCCAGGATGGCCTGGTaGGTCTGTGAATATCTCCAAGTTGCCTGTTCTGCAGCGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSVSSSPKGPRMAW*VCEYLQVACSAAVG Trigger: GCCCACCGCTGCAGAACAGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTGGAGAGCTGCTGACGGAGGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | GGTGTCATCAGGACCCGCACCGGCCGAGACATTTCCCGCAGGAACTaGGCACAATCCTGGTGTCCATGGTACTCTGCCAGGTCTATCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GVIRTRTGRDISRRN*AQSWCPWYSARSIA Trigger: AGCGATAGACCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTGCGGGAAATGTCTCGGCCGGTGCGGGTCCTGATGACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | CCCCTAGTGGTAATGCGGGGACACTGTAGGAGACTCTTGGAGATGGCCTGTCCCTTGTGTGCCTGCTGGTaGCCTGGCAGCTTGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLVVMRGHCRRLLEMACPLCACW*PGSLAL Trigger: GAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAA...GGGACAGGCCATCTCCAAGAGTCTCCTACAGTGTCCCCGCATTACCACTAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS GCA 90 bp | GGTAGAGTGGAGAGGCACCACTGCATGTCCGCTGGTTCACACCACTaGTGTGGGCCGCTGTCAGGAGTTTCAGACAGGTCAGATCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: GRVERHHCMSAGSHH*CGPLSGVSDRSDHH Trigger: GTGGTGATCTGACCTGTCTGAAACTCCTGACAGCGGCCCACAGCAGTGGTGTGAACCAGCGGACATGCAGTGGTGCCTCTCCACTCTACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | CCTGGTGCGTCTGTGAATATCTCCAAGTTGCCTGTTCTGCAGCGGTaGGCCCTGAGTCCTGCCTCTGACTCTGGTCCTGGTCTTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGASVNISKLPVLQR*ALSPASDSGPGLLE Trigger: CTCCAGAAGACCAGGACCAGAGTCAGAGGCAGGACTCAGGGCCCACCGCTGCAGAACAGGCAACTTGGAGATATTCACAGACGCACCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS-3UTR CAA 90 bp | CCAGCACCAAAACCCATGCCCTGTGCCAACTTTATCTCCCTGGAGGTCCCCGTCCCGAAGAAGCGGGCTTaGATGTCCTCAAAGCCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PAPKPMPCANFISLEVPVPKKRA*MSSKPS Trigger: CGACGGCTTTGAGGACATCAAAGCCCGCTTCTTCGG...GACGGGGACCTCCAGGGAGATAAAGTTGGCACAGGGCATGGGTTTTGGTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS TCA 90 bp | GGGCAGTGGCTCCTTCATTATCCCGTGCTGTCAGGCCGATGTCTGTaGATGTCACCAGCCAGACAACTAGAGAGTAGTGGCCGTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQWLLHYPVLSGRCL*MSPARQLESSGRGQ Trigger: CTGCCCACGGCCACTACTCTCTAGTTGTCTGGCTGGTGACATTCACAGACATCGGCCTGACAGCACGGGATAATGAAGGAGCCACTGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | AGCCGGCCCAACTCACTCTCATACTCCTGGCAGCGTCGCCGGAGCTaGAGGTCGTTGATCTGCTTCTCCAGGTATACAAGATCATCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRPNSLSYSWQRRRS*RSLICFSRYTRSSS Trigger: GGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATGAGAGTGAGTTGGGCCGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | ACCCGCACCGGCCGAGACATTTCCCGCAGGAACTGGGCACAATCCTaGTGTCCATGGTACTCTGCCAGGTCTATCGCTGTATACCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: TRTGRDISRRNWAQS*CPWYSARSIAVYPS Trigger: AGATGGGTATACAGCGATAGACCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTGCGGGAAATGTCTCGGCCGGTGCGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS CCA 90 bp | AGATCATCCTCCGTCAGCAGCTCTCCAAAGGGGCCCAGGATGGCCTaGTGCGTCTGTGAATATCTCCAAGTTGCCTGTTCTGCAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RSSSVSSSPKGPRMA*CVCEYLQVACSAAV Trigger: CACCGCTGCAGAACAGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTGGAGAGCTGCTGACGGAGGATGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS-3UTR CAA 90 bp | ATGAACACCCCTGCTATGTTTGCCCCTTGCTGTAAGCTGTTCCCAGCTTCTGAAAGCAGGTGGCGCATCTaGCGCTCCTCGGCTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MNTPAMFAPCCKLFPASESRWRI*RSSAGR Trigger: CCTGCCAGCCGAGGAGCGCAAGATGCGCCACCTGCT...TTCAGAAGCTGGGAACAGCTTACAGCAAGGGGCAAACATAGCAGGGGTGTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | GAGATATTTCCCCATTTTGTGCGTATCCTTAGGCTGTTCCTGGAGCTGGCGCTTGGTGTCAGGCCCAGCTaGCGACCTGGCTCCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIFPHFVRILRLFLELALGVRPS*RPGSTS Trigger: GGACGTGGAGCCAGGTCGCAAGCTGGGCCTGACACC...AAGCGCCAGCTCCAGGAACAGCCTAAGGATACGCACAAAATGGGGAAATATCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS GCA 90 bp | CTCTCATACTCCTGGCAGCGTCGCCGGAGCTGCAGGTCGTTGATCTaGTTCTCCAGGTATACAAGATCATCCTCCGTCAGCAGCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSYSWQRRRSCRSLI*FSRYTRSSSVSSSP Trigger: TGGAGAGCTGCTGACGGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATGAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | AGTGGAGAGGCACCACTGCATGTCCGCTGGTTCACACCACTGCTGTaGGCCGCTGTCAGGAGTTTCAGACAGGTCAGATCACCACTTACA | + |
|
Preference number: 5 (lower is better) Translates to: SGEAPLHVRWFTPLL*AAVRSFRQVRSPLT Trigger: TGTAAGTGGTGATCTGACCTGTCTGAAACTCCTGACAGCGGCCCACAGCAGTGGTGTGAACCAGCGGACATGCAGTGGTGCCTCTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 90 bp | ATCGCTGTATACCCATCTTCATCCCGCAGGAAGGGGTCTACGTGGTaGGAGAGCAGAGTCTGGCAGCACTCCATGTGTCCATTCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IAVYPSSSRRKGSTW*ESRVWQHSMCPFSA Trigger: AGCCGAGAATGGACACATGGAGTGCTGCCAGACTCTGCTCTCCCACCACGTAGACCCCTTCCTGCGGGATGAAGATGGGTATACAGCGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS CCA 90 bp | GGCCGAGACATTTCCCGCAGGAACTGGGCACAATCCTGGTGTCCATaGTACTCTGCCAGGTCTATCGCTGTATACCCATCTTCATCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRDISRRNWAQSWCP*YSARSIAVYPSSSR Trigger: GCGGGATGAAGATGGGTATACAGCGATAGACCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTGCGGGAAATGTCTCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | GATGCTGCTAGCATTCATACCATAGCAGCTATGCTGACCAGCAGGAGAATCGGGATGACGATGCGCTCCTaGCGCAAGCTGGCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DAASIHTIAAMLTSRRIGMTMRS*RKLARS Trigger: GGACCTGGCCAGCTTGCGCAAGGAGCGCATCGTCAT...CCCGATTCTCCTGCTGGTCAGCATAGCTGCTATGGTATGAATGCTAGCAGCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS TCA 90 bp | ACTCACTCTCATACTCCTGGCAGCGTCGCCGGAGCTGCAGGTCGTTaGTCTGCTTCTCCAGGTATACAAGATCATCCTCCGTCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: THSHTPGSVAGAAGR*SASPGIQDHPPSAA Trigger: AGCTGCTGACGGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATGAGAGTGAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 90 bp | CATTTCCCGCAGGAACTGGGCACAATCCTGGTGTCCATGGTACTCTaGCAGGTCTATCGCTGTATACCCATCTTCATCCCGCAGGAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: HFPQELGTILVSMVL*QVYRCIPIFIPQEG Trigger: CCCTTCCTGCGGGATGAAGATGGGTATACAGCGATAGACCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTGCGGGAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | AGTGGGAAGGTGACACCCAGATGTCCACATGAACACCCCTGCTATGTTTGCCCCCGGAGCTGCAGGTCGTaGATCTGCTTCTCCAGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SGKVTPRCPHEHPCYVCPRSCRS*ICFSRY Trigger: ATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCG...GGGGCAAACATAGCAGGGGTGTTCATGTGGACATCTGGGTGTCACCTTCCCACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | AGGCAGAGGAAGCCAAAGGCAGAAAAGGAGGATTCACCCCACCATCTCAGAGCACAGATGTCTCCGCTGTaGAAGCTGCTCCCCTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RQRKPKAEKEDSPHHLRAQMSPL*KLLPWE Trigger: TTCCCAGGGGAGCAGCTTCAACAGCGGAGACATCTG...TGCTCTGAGATGGTGGGGTGAATCCTCCTTTTCTGCCTTTGGCTTCCTCTGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS CCA 90 bp | ATACAAGATCATCCTCCGTCAGCAGCTCTCCAAAGGGGCCCAGGATaGCCTGGTGCGTCTGTGAATATCTCCAAGTTGCCTGTTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: IQDHPPSAALQRGPG*PGASVNISKLPVLQ Trigger: CTGCAGAACAGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTGGAGAGCTGCTGACGGAGGATGATCTTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS-3UTR CAA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTCACAGCTCTGCCAGGTaGCCCGTGGCTGCTGCATCG | + |
|
Preference number: 5 (lower is better) Translates to: AVISPRIDSKCEFTKLKCHSSAR*PVAAAS Trigger: CGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTG...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | GCTTCTGAAGGCCAGTTTCCCTCCAGAGGATACCAACCTTTCTATTCAAAGGGTGTGAATATCTCCAAGTaGCCTGTTCTGCAGCGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASEGQFPSRGYQPFYSKGVNISK*PVLQRW Trigger: CCACCGCTGCAGAACAGGCAACTTGGAGATATTCAC...ACCCTTTGAATAGAAAGGTTGGTATCCTCTGGAGGGAAACTGGCCTTCAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | GCAGTTATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTACTGGTGTGGCCCCGTaGTGTGCCTGCTGGTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AVISPRIDSKCEFTKLKCTGVAP*CACWLP Trigger: AGGCAACCAGCAGGCACACAACGGGGCCACACCAGT...ACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAATAACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS-3UTR CAA 90 bp | ATTTCCCCCAGAATAGACTCCAAGTGTGAATTCACCAAACTAAAATGTGCCACCCTTCCAGGGAGAGTTTaGCAGCCAGCAGTGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISPRIDSKCEFTKLKCATLPGRV*QPAVEE Trigger: CTCCTCCACTGCTGGCTGCAAAACTCTCCCTGGAAG...GGTGGCACATTTTAGTTTGGTGAATTCACACTTGGAGTCTATTCTGGGGGAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS GCA 72 bp | CCGGGGGCTACCCGCGGCCTCTGGGCCCCTGGATCGTaGACGCTGAGCCTCCAGGGTCCTGCAGGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PGATRGLWAPGS*TLSLQGPAGCR Trigger: ACGGCAGCCTGCAGGACCCTGGAGGCTCAGCGTGCACGATCCAGGGGCCCAGAGGCCGCGGGTAGCCCCCGG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | GCTGATGCCCGAGTCGCTGGCCTCCTCTGTGTCGCCTaGCCCGGGCTCCCCACCCATCGCGTCGCCTCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ADARVAGLLCVA*PGLPTHRVASG Trigger: CCCCGAGGCGACGCGATGGGTGGGGAGCCCGGGCCAGGCGACACAGAGGAGGCCAGCGACTCGGGCATCAGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | GGCCCCTGGATCGTGCACGCTGAGCCTCCAGGGTCCTaGAGGCTGCCGTCCGGAGCGCGGGCGTGTAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPWIVHAEPPGS*RLPSGARACRL Trigger: CAGCCTACACGCCCGCGCTCCGGACGGCAGCCTGCAGGACCCTGGAGGCTCAGCGTGCACGATCCAGGGGCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | AGGGGCCCACGCTCCCTGCGGCTCAGCCTCCGCAGCTaGCGGGCGGGCACGTGCGCCATGATGGCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RGPRSLRLSLRS*RAGTCAMMAFQ Trigger: CTGGAAAGCCATCATGGCGCACGTGCCCGCCCGGCAGCTGCGGAGGCTGAGCCGCAGGGAGCGTGGGCCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 72 bp | GACCCGCGCCGGCCTCTGACGGGGCCTCTTCGCAGCTaGTGCCCGAGTCGCTGGCCTCCTCTGTGTCGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DPRRPLTGPLRS*CPSRWPPLCRL Trigger: CAGGCGACACAGAGGAGGCCAGCGACTCGGGCATCAGCTGCGAAGAGGCCCCGTCAGAGGCCGGCGCGGGTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | AGGCGACCGATGTGGCTGCACCAGAAGGGCAGCGGCTaGCCTCTGGGCTCGGCCTTCCCCGGCTCCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRPMWLHQKGSG*PLGSAFPGSSE Trigger: CTCCGAGGAGCCGGGGAAGGCCGAGCCCAGAGGGCAGCCGCTGCCCTTCTGGTGCAGCCACATCGGTCGCCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CCAGGCGCGGCGACCCGCGGCCACCTCGTCGGTCACTaGCTTATGGAAGGCTCGCACAGCCTCCCAGCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PGAATRGHLVGH*LMEGSHSLPAV Trigger: CACGGCTGGGAGGCTGTGCGAGCCTTCCATAAGGCAGTGACCGACGAGGTGGCCGCGGGTCGCCGCGCCTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | TCTCGCGCTGGGCCTCGCTCCGGGAGGGGCCGGCAATaGTCTCCTTGCCTAGGTCCTGCGGGACCGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SRAGPRSGRGRQ*SPCLGPAGPVR Trigger: CCTCACCGGTCCCGCAGGACCTAGGCAAGGAGACCATTGCCGGCCCCTCCCGGAGCGAGGCCCAGCGCGAGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | GGCTGTGGCGGCGCCGACCAGCAACCTCTCAGACACTaGCCAGGCCGCACCCCCAGCTCACAGGGACCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GCGGADQQPLRH*PGRTPSSQGPE Trigger: CTCGGGTCCCTGTGAGCTGGGGGTGCGGCCTGGCCAGTGTCTGAGAGGTTGCTGGTCGGCGCCGCCACAGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | CGGCGACCCGCGGCCACCTCGTCGGTCACTGCCTTATaGAAGGCTCGCACAGCCTCCCAGCCGTGTGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RRPAATSSVTAL*KARTASQPCAP Trigger: GGGCGCACACGGCTGGGAGGCTGTGCGAGCCTTCCATAAGGCAGTGACCGACGAGGTGGCCGCGGGTCGCCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | ACCCCAGCCTCGGCGGCACCGCAGGTTCAGGGCCGCTaGCAGGAAGGGAAGCATGGGGCAAGGACCCGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: TPASAAPQVQGR*QEGKHGARTRV Trigger: CACTCGGGTCCTTGCCCCATGCTTCCCTTCCTGGCAGCGGCCCTGAACCTGCGGTGCCGCCGAGGCTGGGGT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | CGATGTGGCTGCACCAGAAGGGCAGCGGCTGCCCTCTaGGCTCGGCCTTCCCCGGCTCCTCGGAGGCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RCGCTRRAAAAL*ARPSPAPRRLR Trigger: TCGAAGCCTCCGAGGAGCCGGGGAAGGCCGAGCCCAGAGGGCAGCCGCTGCCCTTCTGGTGCAGCCACATCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 90 bp | GCTTCCTCGTCTTCCAGGCCGGGAGCCCGGGGCAGAAAGTGGCTGTaGACGGTGATGCTGACCAGGGGCTCGGGCAGGAGGGCCTGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSSSRPGARGRKWL*TVMLTRGSGRRACS Trigger: GCTGCAGGCCCTCCTGCCCGAGCCCCTGGTCAGCATCACCGTCAACAGCCACTTTCTGCCCCGGGCTCCCGGCCTGGAAGACGAGGAAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CCCGCAGCCCGCATCACGGACCAGCCAGCACAGCTCTaGCAGGTTGCCCGTGGCTGCTGCATCGTGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: PAARITDQPAQL*QVARGCCIVHW Trigger: CCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTCCGTGATGCGGGCTGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CAGGTGCCCAGCAGGTGGGTGATGATGCCACGCTGCTaGCACAGGTGGCCAAGCCGAGGGCCATCGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: QVPSRWVMMPRC*HRWPSRGPSLG Trigger: GCCCAGCGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCACCCACCTGCTGGGCACCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | CGGCTCCTCGGAGGCTTCGAGTTCAGTCGCCAGGACTaGAGCTTCCTCGTCTTCCAGGCCGGGAGCCCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLGGFEFSRQD*SFLVFQAGSPG Trigger: CCCCGGGCTCCCGGCCTGGAAGACGAGGAAGCTCCAGTCCTGGCGACTGAACTCGAAGCCTCCGAGGAGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | AGCAGGTGGGTGATGATGCCACGCTGCTGCCACAGGTaGCCAAGCCGAGGGCCATCGCTGGGCTGCGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRWVMMPRCCHR*PSRGPSLGCGE Trigger: CTCCCCGCAGCCCAGCGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCACCCACCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
||
| CDS CAA 90 bp | AGCCCGCAGCCCGCATCACGGACCAGCCAGCACAGCTCTGCCAGGTaGCCCGTGGCTGCTGCATCGTGCACTGGTGTGGCCCCGTTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SPQPASRTSQHSSAR*PVAAASCTGVAPLC Trigger: ACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTCCGTGATGCGGGCTGCGGGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
||
| CDS CCA 72 bp | GCAGCCAGGTGCAGCGGAGAGACACCTGAGGCATCTTaGTCCTGCAGCCCGCAGCCCGCATCACGGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AARCSGETPEAS*SCSPQPASRTS Trigger: GCTGGTCCGTGATGCGGGCTGCGGGCTGCAGGACCAAGATGCCTCAGGTGTCTCTCCGCTGCACCTGGCTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | TTCCCCCGCAATGTCCGAACTGACACTCCGCACTCTTaGATCTCGCGCTGGGCCTCGCTCCGGGAGGGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: FPRNVRTDTPHS*ISRWASLREGP Trigger: CGGCCCCTCCCGGAGCGAGGCCCAGCGCGAGATCCAAGAGTGCGGAGTGTCAGTTCGGACATTGCGGGGGAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
||
| CDS CAA 72 bp | CCCGCATCACGGACCAGCCAGCACAGCTCTGCCAGGTaGCCCGTGGCTGCTGCATCGTGCACTGGTGTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PASRTSQHSSAR*PVAAASCTGVA Trigger: GGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTCCGTGATGCGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CAGCCAGCACAGCTCTGCCAGGTTGCCCGTGGCTGCTaGATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QPAQLCQVARGC*IVHWCGPVVCL Trigger: CAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | GACCAGCCAGCACAGCTCTGCCAGGTTGCCCGTGGCTaGTGCATCGTGCACTGGTGTGGCCCCGTTGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: DQPAQLCQVARG*CIVHWCGPVVC Trigger: GCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTGCTGGCTGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | TTCCAGGTGCCCAGCAGGTGGGTGATGATGCCACGCTaGTGCCACAGGTGGCCAAGCCGAGGGCCATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: FQVPSRWVMMPR*CHRWPSRGPSL Trigger: CAGCGATGGCCCTCGGCTTGGCCACCTGTGGCAGCAGCGTGGCATCATCACCCACCTGCTGGGCACCTGGAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | CCAGGTTGCCCGTGGCTGCTGCATCGTGCACTGGTGTaGCCCCGTTGTGTGCCTGCTGGTTGCCTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGCPWLLHRALV*PRCVPAGCLAA Trigger: AGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | CTCTGCCAGGTTGCCCGTGGCTGCTGCATCGTGCACTaGTGTGGCCCCGTTGTGTGCCTGCTGGTTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: LCQVARGCCIVH*CGPVVCLLVAW Trigger: CCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | ACCGCAGGTTCAGGGCCGCTGCCAGGAAGGGAAGCATaGGGCAAGGACCCGAGTGGTGTCAGGCCCAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: TAGSGPLPGREA*GKDPSGVRPSL Trigger: CAAGCTGGGCCTGACACCACTCGGGTCCTTGCCCCATGCTTCCCTTCCTGGCAGCGGCCCTGAACCTGCGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 90 bp | GCTGACTTCTTCCAATGGCCGAGGAAGAGCATGACGATGCGCTCCTaGCGCAAGCTGGCCAGGTCCAGCCCTGGACCCGCGCCGGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: ADFFQWPRKSMTMRS*RKLARSSPGPAPAS Trigger: AGAGGCCGGCGCGGGTCCAGGGCTGGACCTGGCCAGCTTGCGCAAGGAGCGCATCGTCATGCTCTTCCTCGGCCATTGGAAGAAGTCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CACAGCTCTGCCAGGTTGCCCGTGGCTGCTGCATCGTaGACTGGTGTGGCCCCGTTGTGTGCCTGCTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: HSSARLPVAAAS*TGVAPLCACWL Trigger: CAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCCACGGGCAACCTGGCAGAGCTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | TCCACCAGGGCTGGGTGTCCAAACCGGGCAGCCAGGTaGAGCGGAGAGACACCTGAGGCATCTTGGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: STRAGCPNRAAR*SGETPEASWSC Trigger: GCAGGACCAAGATGCCTCAGGTGTCTCTCCGCTGCACCTGGCTGCCCGGTTTGGACACCCAGCCCTGGTGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | GGTAAGGCCCCTTCCAGCGTCTCCAGTGTGGCTGCATaGCCCTCACGGAGTAACCACTCCACCAGGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GKAPSSVSSVAA*PSRSNHSTRAG Trigger: CCCAGCCCTGGTGGAGTGGTTACTCCGTGAGGGCCATGCAGCCACACTGGAGACGCTGGAAGGGGCCTTACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | CAAGATCTCCCGCAGGCAAGCCATCCAGCTGCAGAGTaGCTAGGCCAGCACGGGAGTCCCGGGCTTCCACCT | + |
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Preference number: 6 (lower is better) Translates to: QDLPQASHPAAE*LGQHGSPGLPP Trigger: AGGTGGAAGCCCGGGACTCCCGTGCTGGCCTAGCCACTCTGCAGCTGGATGGCTTGCCTGCGGGAGATCTTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | GCTGCATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTaGTGGTTGCCTGGCAGCTTGGCTCTCTGTACCAGG | + |
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Preference number: 6 (lower is better) Translates to: AASCTGVAPLCA*WLPGSLALCTR Trigger: CCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | GGCTGCTGCATCGTGCACTGGTGTGGCCCCGTTGTGTaGCTGCTGGTTGCCTGGCAGCTTGGCTCTCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: GCCIVHWCGPVV*LLVAWQLGSLY Trigger: GTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CCTCTTGGCAGGCCAGGTAGAGTGGAGAGGCACCACTaGATGTCCGCTGGTTCACACCACTGCTGTGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: PLGRPGRVERHH*MSAGSHHCCGP Trigger: CGGCCCACAGCAGTGGTGTGAACCAGCGGACATGCAGTGGTGCCTCTCCACTCTACCTGGCCTGCCAAGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | AGCATGTCAAGATCTCCCGCAGGCAAGCCATCCAGCTaGAGAGTGGCTAGGCCAGCACGGGAGTCCCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SMSRSPAGKPSS*RVARPARESRA Trigger: AGCCCGGGACTCCCGTGCTGGCCTAGCCACTCTGCAGCTGGATGGCTTGCCTGCGGGAGATCTTGACATGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | GCTCGAAAACCTCGAAGCACAGCAGGTGGCGCATCTTaGGCTCCTCGGCTGGCAGGTCGCACTCCAGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: ARKPRSTAGGAS*APRLAGRTPGA Trigger: AGCTCCTGGAGTGCGACCTGCCAGCCGAGGAGCGCAAGATGCGCCACCTGCTGTGCTTCGAGGTTTTCGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | AAGGCTCGCACAGCCTCCCAGCCGTGTGCGCCCAGATaGTCGAAAACCTCGAAGCACAGCAGGTGGCGCATC | + |
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Preference number: 6 (lower is better) Translates to: KARTASQPCAPR*SKTSKHSRWRI Trigger: GATGCGCCACCTGCTGTGCTTCGAGGTTTTCGAGCATCTGGGCGCACACGGCTGGGAGGCTGTGCGAGCCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 72 bp | TGCTCGAAAACCTCGAAGCACAGCAGGTGGCGCATCTaGCGCTCCTCGGCTGGCAGGTCGCACTCCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CSKTSKHSRWRI*RSSAGRSHSRS Trigger: GCTCCTGGAGTGCGACCTGCCAGCCGAGGAGCGCAAGATGCGCCACCTGCTGTGCTTCGAGGTTTTCGAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | GCATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTGCTaGTTGCCTGGCAGCTTGGCTCTCTGTACCAGGAAC | + |
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Preference number: 6 (lower is better) Translates to: ASCTGVAPLCAC*LPGSLALCTRN Trigger: GTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | GGTGCAGTGGTAAGGCCCCTTCCAGCGTCTCCAGTGTaGCTGCATGGCCCTCACGGAGTAACCACTCCACCA | + |
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Preference number: 6 (lower is better) Translates to: GAVVRPLPASPV*LHGPHGVTTPP Trigger: TGGTGGAGTGGTTACTCCGTGAGGGCCATGCAGCCACACTGGAGACGCTGGAAGGGGCCTTACCACTGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | AGGACCCGCACCGGCCGAGACATTTCCCGCAGGAACTaGGCACAATCCTGGTGTCCATGGTACTCTGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RTRTGRDISRRN*AQSWCPWYSAR Trigger: CCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTGCGGGAAATGTCTCGGCCGGTGCGGGTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS CAA 90 bp | GCTGCTGCATCGTGCACTGGTGTGGCCCCGTTGTGTGCCTGCTGGTaGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTTGACACAGTCC | + |
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Preference number: 6 (lower is better) Translates to: AAASCTGVAPLCACW*PGSLALCTRNLTQS Trigger: GGACTGTGTCAAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGATGCAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 72 bp | AGGGGCAAACTCGAAGTTCCCCCGCAATGTCCGAACTaGCACTCCGCACTCTTGGATCTCGCGCTGGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGKLEVPPQCPN*HSALLDLALGL Trigger: GAGGCCCAGCGCGAGATCCAAGAGTGCGGAGTGTCAGTTCGGACATTGCGGGGGAACTTCGAGTTTGCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | TGCCTTATGGAAGGCTCGCACAGCCTCCCAGCCGTGTaGGCCCAGATGCTCGAAAACCTCGAAGCACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: CLMEGSHSLPAV*AQMLENLEAQQ Trigger: CTGCTGTGCTTCGAGGTTTTCGAGCATCTGGGCGCACACGGCTGGGAGGCTGTGCGAGCCTTCCATAAGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 72 bp | TCGTGCACTGGTGTGGCCCCGTTGTGTGCCTGCTGGTaGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: SCTGVAPLCACW*PGSLALCTRNL Trigger: CAAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACCAGCAGGCACACAACGGGGCCACACCAGTGCACGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 72 bp | CCAGGATGGCCTGGTGCGTCTGTGAATATCTCCAAGTaGCCTGTTCTGCAGCGGTGGGCCCTGAGTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: PGWPGASVNISK*PVLQRWALSPA Trigger: GGCAGGACTCAGGGCCCACCGCTGCAGAACAGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 72 bp | GGTTGCCTGGCAGCTTGGCTCTCTGTACCAGGAACTTaGCACAGTCCAGGTGACCAGCCCGGGTGGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: GCLAAWLSVPGT*HSPGDQPGWHD Trigger: ATCATGCCACCCGGGCTGGTCACCTGGACTGTGTCAAGTTCCTGGTACAGAGAGCCAAGCTGCCAGGCAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | TCCTGGCAGCGTCGCCGGAGCTGCAGGTCGTTGATCTaGTTCTCCAGGTATACAAGATCATCCTCCGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: SWQRRRSCRSLI*FSRYTRSSSVS Trigger: GCTGACGGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | TACCCATCTTCATCCCGCAGGAAGGGGTCTACGTGGTaGGAGAGCAGAGTCTGGCAGCACTCCATGTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: YPSSSRRKGSTW*ESRVWQHSMCP Trigger: TGGACACATGGAGTGCTGCCAGACTCTGCTCTCCCACCACGTAGACCCCTTCCTGCGGGATGAAGATGGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS CCA 72 bp | CATCCTCCGTCAGCAGCTCTCCAAAGGGGCCCAGGATaGCCTGGTGCGTCTGTGAATATCTCCAAGTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: HPPSAALQRGPG*PGASVNISKLP Trigger: AGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTGGAGAGCTGCTGACGGAGGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 72 bp | TGGCATGATGCACCAGGCCAGCCCCCAGATCATCAGTaGTGTCTGGTCTTAGGGCACCAGCCTCAAATAGCC | + |
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Preference number: 6 (lower is better) Translates to: WHDAPGQPPDHQ*CLVLGHQPQIA Trigger: GGCTATTTGAGGCTGGTGCCCTAAGACCAGACATCACTGATGATCTGGGGGCTGGCCTGGTGCATCATGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 72 bp | CATACTCCTGGCAGCGTCGCCGGAGCTGCAGGTCGTTaGTCTGCTTCTCCAGGTATACAAGATCATCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: HTPGSVAGAAGR*SASPGIQDHPP Trigger: CGGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | GTCAGCAGCTCTCCAAAGGGGCCCAGGATGGCCTGGTaGGTCTGTGAATATCTCCAAGTTGCCTGTTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VSSSPKGPRMAW*VCEYLQVACSA Trigger: TGCAGAACAGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTGGAGAGCTGCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | GGCCGAGACATTTCCCGCAGGAACTGGGCACAATCCTaGTGTCCATGGTACTCTGCCAGGTCTATCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: GRDISRRNWAQS*CPWYSARSIAV Trigger: TACAGCGATAGACCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTGCGGGAAATGTCTCGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS CCA 72 bp | TCTGTGAATATCTCCAAGTTGCCTGTTCTGCAGCGGTaGGCCCTGAGTCCTGCCTCTGACTCTGGTCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SVNISKLPVLQR*ALSPASDSGPG Trigger: ACCAGGACCAGAGTCAGAGGCAGGACTCAGGGCCCACCGCTGCAGAACAGGCAACTTGGAGATATTCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CCA 72 bp | TCCGTCAGCAGCTCTCCAAAGGGGCCCAGGATGGCCTaGTGCGTCTGTGAATATCTCCAAGTTGCCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SVSSSPKGPRMA*CVCEYLQVACS Trigger: AGAACAGGCAACTTGGAGATATTCACAGACGCACCAGGCCATCCTGGGCCCCTTTGGAGAGCTGCTGACGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 90 bp | AACTCACTCTCATACTCCTGGCAGCGTCGCCGGAGCTGCAGGTCGTaGATCTGCTTCTCCAGGTATACAAGATCATCCTCCGTCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: NSLSYSWQRRRSCRS*ICFSRYTRSSSVSS Trigger: GCTGCTGACGGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATGAGAGTGAGTT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS CAA 72 bp | TCATACTCCTGGCAGCGTCGCCGGAGCTGCAGGTCGTaGATCTGCTTCTCCAGGTATACAAGATCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SYSWQRRRSCRS*ICFSRYTRSSS Trigger: GGAGGATGATCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS GCA 72 bp | CAGGAACTGGGCACAATCCTGGTGTCCATGGTACTCTaGCAGGTCTATCGCTGTATACCCATCTTCATCCCG | + |
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Preference number: 6 (lower is better) Translates to: QELGTILVSMVL*QVYRCIPIFIP Trigger: CGGGATGAAGATGGGTATACAGCGATAGACCTGGCAGAGTACCATGGACACCAGGATTGTGCCCAGTTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088904.10 |
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| CDS GCA 72 bp | AACTCACTCTCATACTCCTGGCAGCGTCGCCGGAGCTaGAGGTCGTTGATCTGCTTCTCCAGGTATACAAGA | + |
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Preference number: 6 (lower is better) Translates to: NSLSYSWQRRRS*RSLICFSRYTR Trigger: TCTTGTATACCTGGAGAAGCAGATCAACGACCTGCAGCTCCGGCGACGCTGCCAGGAGTATGAGAGTGAGTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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| CDS TCA 72 bp | CTCCTTCATTATCCCGTGCTGTCAGGCCGATGTCTGTaGATGTCACCAGCCAGACAACTAGAGAGTAGTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLHYPVLSGRCL*MSPARQLESSG Trigger: GCCACTACTCTCTAGTTGTCTGGCTGGTGACATTCACAGACATCGGCCTGACAGCACGGGATAATGAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000088904.10 ENSMUST00000176156.2 |
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