RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ESPL1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000058290

Ensembl transcript IDs: ENSMUST00000064924.6, ENSMUST00000229050.2, ENSMUST00000229942.2, ENSMUST00000230212.2, ENSMUST00000231104.2

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp CCGCAGGACAGCCTGCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTAAGGAGGGCAGCCGGGTaGCCGGCTGTGCTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PQDSLPIKEAGTGSVPCVRRAAG*PAVLGG
Trigger: TCCTCCAAGCACAGCCGGTCACCCGGCTGCCCTCCT...TACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGCAGGCTGTCCTGCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS-3UTR GCA 90 bp CCGCAGGACAGCCTGCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTACTTGGAGGATGGGCGTaGTTTCCCAAGGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: PQDSLPIKEAGTGSVPCVLGGWA*FPKAAF
Trigger: AAAAGCTGCCTTGGGAAAGCACGCCCATCCTCCAAG...TACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGCAGGCTGTCCTGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS-3UTR CCA 90 bp GCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTAGATATATAAATCCCGCTGTGCTTGGAGGATaGGCGTGCTTTCCCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AHQGSGHRLRALRRYINPAVLGG*ACFPKA
Trigger: TGCCTTGGGAAAGCACGCCCATCCTCCAAGCACAGC...GGGATTTATATATCTACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS-3UTR GCA 90 bp GGACAGCCTGCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTAGATATGAAATCTCTCCTCTGTaGTCGACAGGTTACTGTGAG +
Preference number: 4 (lower is better)
Translates to: GQPAHQGSGHRLRALRRYEISPL*STGYCE
Trigger: CTCACAGTAACCTGTCGAGCACAGAGGAGAGATTTC...ATATCTACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGCAGGCTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS-3UTR GCA 90 bp GCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTAGATATATAAATCCCTCCCAAGGCAGCTTTTaGAGGTCCTTGTCTAACACC +
Preference number: 4 (lower is better)
Translates to: AHQGSGHRLRALRRYINPSQGSF*RSLSNT
Trigger: GGTGTTAGACAAGGACCTGCAAAAGCTGCCTTGGGA...GGGATTTATATATCTACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS GCA 90 bp TACCAGCTCCCTCCAGGTTTCCATGCACGGCAAGGGCTGCACTGCTaGAGCCGAACAGCAGGGCCACCGCCCGGCAGCTCAGCCGCAGGA +
Preference number: 5 (lower is better)
Translates to: YQLPPGFHARQGLHC*SRTAGPPPGSSAAG
Trigger: TCCTGCGGCTGAGCTGCCGGGCGGTGGCCCTGCTGTTCGGCTGCAGCAGTGCAGCCCTTGCCGTGCATGGAAACCTGGAGGGAGCTGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp CGATACCAGCTCCCTCCAGGTTTCCATGCACGGCAAGGGCTGCACTaGTGCAGCCGAACAGCAGGGCCACCGCCCGGCAGCTCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: RYQLPPGFHARQGLH*CSRTAGPPPGSSAA
Trigger: TGCGGCTGAGCTGCCGGGCGGTGGCCCTGCTGTTCGGCTGCAGCAGTGCAGCCCTTGCCGTGCATGGAAACCTGGAGGGAGCTGGTATCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp CCAGACCCTGAGCTTTGTGACCGGTGGCCAGCCTCACTCCGGCAGTaGCCAGCACCCAGCGCAGACAGACTGCTGAGAGGGCAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: PDPELCDRWPASLRQ*PAPSADRLLRGQGW
Trigger: CCAGCCCTGCCCTCTCAGCAGTCTGTCTGCGCTGGGTGCTGGTCACTGCCGGAGTGAGGCTGGCCACCGGTCACAAAGCTCAGGGTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp GAGCACGATACCAGCTCCCTCCAGGTTTCCATGCACGGCAAGGGCTaGACTGCTGCAGCCGAACAGCAGGGCCACCGCCCGGCAGCTCAG +
Preference number: 5 (lower is better)
Translates to: EHDTSSLQVSMHGKG*TAAAEQQGHRPAAQ
Trigger: CTGAGCTGCCGGGCGGTGGCCCTGCTGTTCGGCTGCAGCAGTGCAGCCCTTGCCGTGCATGGAAACCTGGAGGGAGCTGGTATCGTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GGCGGTGGTGGTGGTTCCAGCAGAGCCGACGGCAGTGTTCCAGGGTaGTTTCCAAGAGGCAGAGGGCCCTCTGAGGCGAGAGAGGACCGG +
Preference number: 5 (lower is better)
Translates to: GGGGGSSRADGSVPG*FPRGRGPSEAREDR
Trigger: CCGGTCCTCTCTCGCCTCAGAGGGCCCTCTGCCTCTTGGAAATCACCCTGGAACACTGCCGTCGGCTCTGCTGGAACCACCACCACCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp ATTCCCGCAGCAGCTCTTGTAGTTTGGAGGCCTCCTGGGCAAGGCTaGGGTCAGCACTGCATGGCAGCAGCAGCCCCCTCCAGCAGCCCA +
Preference number: 5 (lower is better)
Translates to: IPAAALVVWRPPGQG*GQHCMAAAAPSSSP
Trigger: TGGGCTGCTGGAGGGGGCTGCTGCTGCCATGCAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp TCCCAGCCACATTCCCGCAGCAGCTCTTGTAGTTTGGAGGCCTCCTaGGCAAGGCTGGGGTCAGCACTGCATGGCAGCAGCAGCCCCCTC +
Preference number: 5 (lower is better)
Translates to: SQPHSRSSSCSLEAS*ARLGSALHGSSSPL
Trigger: GAGGGGGCTGCTGCTGCCATGCAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAATGTGGCTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp TGGGCTCGGTCAGGCTGGGCTGGGCACAGCCCACACGCCAAGGCCTaGACATCCTGGCTGGTGAGGATTCTGGCCCCACTAAGGATGACT +
Preference number: 5 (lower is better)
Translates to: WARSGWAGHSPHAKA*TSWLVRILAPLRMT
Trigger: AGTCATCCTTAGTGGGGCCAGAATCCTCACCAGCCAGGATGTTCAGGCCTTGGCGTGTGGGCTGTGCCCAGCCCAGCCTGACCGAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp GCCGCTCCAACAGTGCCTCTGCTCCCTTCCAAAACAGAGAGAAGCTaGCCCGGGTCACGGCCTCATAGTCCTGAGGGGCAGCCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: AAPTVPLLPSKTERS*PGSRPHSPEGQPLQ
Trigger: CTGGAGAGGCTGCCCCTCAGGACTATGAGGCCGTGACCCGGGGCAGCTTCTCTCTGTTTTGGAAGGGAGCAGAGGCACTGTTGGAGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
CDS GCA 90 bp CCGGAGCGGGGGCGACGGCGCCTCGATACTGTTGATAAGAACGGCTaGTGCCTTCCTCAGAAGCTGGGCCACTGCCCCTGGTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: PERGRRRLDTVDKNG*CLPQKLGHCPWSFF
Trigger: GAAGAAAGACCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCCGTTCTTATCAACAGTATCGAGGCGCCGTCGCCCCCGCTCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp CTGAGCAGGAAGCGGAAGGAGGGCAGCCGGGTGACCGGCTGTGCTTaGAGGATGGGCGTGCTTTCCCAAGGCAGCTTTTGCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSRKRKEGSRVTGCA*RMGVLSQGSFCRSL
Trigger: CAAGGACCTGCAAAAGCTGCCTTGGGAAAGCACGCCCATCCTCCAAGCACAGCCGGTCACCCGGCTGCCCTCCTTCCGCTTCCTGCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000229942.2
CDS TCA 90 bp CTGCAGTCTGCTGGAGACACCGCACAGCTGGGGCTCGCCCCTTGGTaGGCACTTCTTTCCACAGAGTCAGGGCCTGGTCCAGGCATTTGG +
Preference number: 5 (lower is better)
Translates to: LQSAGDTAQLGLAPW*ALLSTESGPGPGIW
Trigger: CCAAATGCCTGGACCAGGCCCTGACTCTGTGGAAAGAAGTGCTCACCAAGGGGCGAGCCCCAGCTGTGCGGTGTCTCCAGCAGACTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp GTGGTAGCACAGCACTTGGGCCAGTTCCACCAGGTAGGTAGCTCGTaGCCAGGCTCCAGCTGCTGTCTCTTCAGGGCTCAGCTCGAGCAG +
Preference number: 5 (lower is better)
Translates to: VVAQHLGQFHQVGSS*PGSSCCLFRAQLEQ
Trigger: CTGCTCGAGCTGAGCCCTGAAGAGACAGCAGCTGGAGCCTGGGCACGAGCTACCTACCTGGTGGAACTGGCCCAAGTGCTGTGCTACCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp AAGATGTTGACTTCGAGGGGCCTCCTGGCTCTGAACCTGTCCTACTaGCTCGCTCAGGAGCACTTGGGCTCGGTCAGGCTGGGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: KMLTSRGLLALNLSY*LAQEHLGSVRLGWA
Trigger: TGCCCAGCCCAGCCTGACCGAGCCCAAGTGCTCCTGAGCGAGGCAGTAGGACAGGTTCAGAGCCAGGAGGCCCCTCGAAGTCAACATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp CGACGGCAGTGTTCCAGGGTGATTTCCAAGAGGCAGAGGGCCCTCTaGGGCGAGAGAGGACCGGGAGAGCTACCACCCTCACCTACTAAG +
Preference number: 5 (lower is better)
Translates to: RRQCSRVISKRQRAL*GERGPGELPPSPTK
Trigger: CTTAGTAGGTGAGGGTGGTAGCTCTCCCGGTCCTCTCTCGCCTCAGAGGGCCCTCTGCCTCTTGGAAATCACCCTGGAACACTGCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp GAGCGGGGGCGACGGCGCCTCGATACTGTTGATAAGAACGGCTGCTaGCTTCCTCAGAAGCTGGGCCACTGCCCCTGGTCTTTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: ERGRRRLDTVDKNGC*LPQKLGHCPWSFFY
Trigger: GTAGAAGAAAGACCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCCGTTCTTATCAACAGTATCGAGGCGCCGTCGCCCCCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp CTACACTGGTCTTCTCTAGGTGATTACGAGCCCTCTCCACTGCTCTaGCAGCCTGGCGGTGGTGGTGGTTCCAGCAGAGCCGACGGCAGT +
Preference number: 5 (lower is better)
Translates to: LHWSSLGDYEPSPLL*QPGGGGGSSRADGS
Trigger: ACTGCCGTCGGCTCTGCTGGAACCACCACCACCGCCAGGCTGCCAGAGCAGTGGAGAGGGCTCGTAATCACCTAGAGAAGACCAGTGTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp TGGGGGAAGCAGCCAGATCCCAAAGCCTTAAAGGAAAAGAGGCGCTaGATACGGGCCAGTGGGACACCTCCGGGCCTCTCCTTCAGGTCC +
Preference number: 5 (lower is better)
Translates to: WGKQPDPKALKEKRR*IRASGTPPGLSFRS
Trigger: GGACCTGAAGGAGAGGCCCGGAGGTGTCCCACTGGCCCGTATCCAGCGCCTCTTTTCCTTTAAGGCTTTGGGATCTGGCTGCTTCCCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp CCCAGCACCTGTTCCTCCAGGGCGGTGATGAGTGCCTCCATCCTTTaGTCCAGTGCCAGCCGGCCCGTCCACCATACTCGTTTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: PSTCSSRAVMSASIL*SSASRPVHHTRFSV
Trigger: TACTGAGAAACGAGTATGGTGGACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTGGAGGAACAGGTGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS-3UTR CAA 90 bp CAGGACAGCCTGCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTAGATCACCAATACAAGATGTaGACTTCGAGGGGCCTCCTG +
Preference number: 5 (lower is better)
Translates to: QDSLPIKEAGTGSVPCVDHQYKM*TSRGLL
Trigger: CAGGAGGCCCCTCGAAGTCAACATCTTGTATTGGTG...ATCTACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGCAGGCTGTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS GCA 90 bp CTGTTCCTCCAGGGCGGTGATGAGTGCCTCCATCCTTTGGTCCAGTaGCAGCCGGCCCGTCCACCATACTCGTTTCTCAGTACAGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFLQGGDECLHPLVQ*QPARPPYSFLSTAA
Trigger: AGCAGCTGTACTGAGAAACGAGTATGGTGGACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTGGAGGAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp AGCAGAGCACAGGTCAGGGACAGCAGCTGGCACGCGTCACTTGTCTaGTCCAGGCTCCTCAGGCTTGACTCCGCCTCTTCCAGATACAAC +
Preference number: 5 (lower is better)
Translates to: SRAQVRDSSWHASLV*SRLLRLDSASSRYN
Trigger: GTTGTATCTGGAAGAGGCGGAGTCAAGCCTGAGGAGCCTGGACCAGACAAGTGACGCGTGCCAGCTGCTGTCCCTGACCTGTGCTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS-3UTR CAA 90 bp CCTGCCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCTGCGTAGATATATAAATGGTGACCGGCTGTGCTaGGAGGATGGGCGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: PAHQGSGHRLRALRRYINGDRLC*EDGRAF
Trigger: GAAAGCACGCCCATCCTCCAAGCACAGCCGGTCACC...ATTTATATATCTACGCAGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000229942.2
CDS TCA 90 bp GCCATCCTCCAAGAGCACCAAGAAGCTCAAGGCATTCAGCCGAGTTaGGAACGCAGCTCGCCGCTCCAACAGTGCCTCTGCTCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: AILQEHQEAQGIQPS*ERSSPLQQCLCSLP
Trigger: TGGAAGGGAGCAGAGGCACTGTTGGAGCGGCGAGCTGCGTTCTCAACTCGGCTGAATGCCTTGAGCTTCTTGGTGCTCTTGGAGGATGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GACCCAGGCGGCCGACCAGCCTCTCCGAGCAGGTCAGCACCTCTGTaGGAACCTGCCATTTTTGCACCAGATTCTCACCGTAGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: DPGGRPASPSRSAPL*EPAIFAPDSHRSPE
Trigger: TTCTGGACTACGGTGAGAATCTGGTGCAAAAATGGCAGGTTCTCACAGAGGTGCTGACCTGCTCGGAGAGGCTGGTCGGCCGCCTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp CAAGAGCAGGTGGGCTCTCCAGATCTCCAAGCTCTGTATCCGTGTTaGCACAAACTTCAGCCCCGACGCCAGGACCTTCCCCAGGCTCTT +
Preference number: 5 (lower is better)
Translates to: QEQVGSPDLQALYPC*HKLQPRRQDLPQAL
Trigger: AAGAGCCTGGGGAAGGTCCTGGCGTCGGGGCTGAAGTTTGTGGCAACACGGATACAGAGCTTGGAGATCTGGAGAGCCCACCTGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp GGGTGGACTTCTTCAAATATGGTGAAAGGGACACGAGGGCCAGCTTaGCTAGCCCGACCTGGAGGCTTAGGGGTACAAGGTGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: GWTSSNMVKGTRGPA*LARPGGLGVQGGPS
Trigger: GGAAGGGCCACCTTGTACCCCTAAGCCTCCAGGTCGGGCTAGGCAAGCTGGCCCTCGTGTCCCTTTCACCATATTTGAAGAAGTCCACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp GTCCGGGATCTGGACAGGAACTCCTTCAAGTCAGGCAGCAGCTGCTaGGTCTCCTCCTTGCTGCAGAGCAGAGTGGCGAAGTTGACTCCT +
Preference number: 5 (lower is better)
Translates to: VRDLDRNSFKSGSSC*VSSLLQSRVAKLTP
Trigger: AGGAGTCAACTTCGCCACTCTGCTCTGCAGCAAGGAGGAGACCCAGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTCCAGATCCCGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 90 bp TCCTGGGCCTCAGGACTCACGGACTCCAGAAGCTGCAGGGCTTCCTaGACAGCATCCAAGGCAGAGCAGTTGGTCTGCTGGGTAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SWASGLTDSRSCRAS*TASKAEQLVCWVKL
Trigger: CAACTTTACCCAGCAGACCAACTGCTCTGCCTTGGATGCTGTCCAGGAAGCCCTGCAGCTTCTGGAGTCCGTGAGTCCTGAGGCCCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp AGACTGCTGAGAGGGCAGGGCTGGCACACAGTAAGCAGTCACAGCTaGGCAAGTGAGACAGGAAGCCAGGGTTGGGTGGTGGCTTGGTTT +
Preference number: 5 (lower is better)
Translates to: RLLRGQGWHTVSSHS*ASETGSQGWVVAWF
Trigger: AAACCAAGCCACCACCCAACCCTGGCTTCCTGTCTCACTTGCCCAGCTGTGACTGCTTACTGTGTGCCAGCCCTGCCCTCTCAGCAGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp AGGCGAGTCTGGGCCCGCCTGTGGACCCTGGGAGCCAAGGGAACCTaGAGCTTGCTCTTGGTGGGGTGGACTTCTTCAAATATGGTGAAA +
Preference number: 5 (lower is better)
Translates to: RRVWARLWTLGAKGT*SLLLVGWTSSNMVK
Trigger: TTTCACCATATTTGAAGAAGTCCACCCCACCAAGAGCAAGCTCCAGGTTCCCTTGGCTCCCAGGGTCCACAGGCGGGCCCAGACTCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp AGTCAGGATATTCCCAGCCACATTCCCGCAGCAGCTCTTGTAGTTTaGAGGCCTCCTGGGCAAGGCTGGGGTCAGCACTGCATGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SQDIPSHIPAAALVV*RPPGQGWGQHCMAA
Trigger: TGCTGCCATGCAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAATGTGGCTGGGAATATCCTGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GCATGGAGAGGCTGGGCAAGGCGCAGCACAGTGTCTGGGCTTCCCTaGGTGGAACCATTGCGAAGTAGGATGAAGAGAATGCGTTCCAGG +
Preference number: 5 (lower is better)
Translates to: AWRGWARRSTVSGLP*VEPLRSRMKRMRSR
Trigger: CCTGGAACGCATTCTCTTCATCCTACTTCGCAATGGTTCCACTCAGGGAAGCCCAGACACTGTGCTGCGCCTTGCCCAGCCTCTCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
CDS TCA 90 bp ATCTGGCATAACTGGAGGCTAGGAGCTACACTGGTCTTCTCTAGGTaGTTACGAGCCCTCTCCACTGCTCTGGCAGCCTGGCGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: IWHNWRLGATLVFSR*LRALSTALAAWRWW
Trigger: CCACCACCGCCAGGCTGCCAGAGCAGTGGAGAGGGCTCGTAATCACCTAGAGAAGACCAGTGTAGCTCCTAGCCTCCAGTTATGCCAGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GGACTGGGGAGGAGTTTACAGAGGACTGGATGGGACCAGGTTCGTTaGGCACAGTGTCCACCAGCTCAAGGGCAGGACCTTTCAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLGRSLQRTGWDQVR*AQCPPAQGQDLSGR
Trigger: CCTTCCTGAAAGGTCCTGCCCTTGAGCTGGTGGACACTGTGCTCAACGAACCTGGTCCCATCCAGTCCTCTGTAAACTCCTCCCCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp CCTCTCCTTCAGGTCCAGCCTCTGCAGATGCTCTGCCAGTTCAGGTaGTTCTTGCTGCTTCTGGGCCTTGCTGAGCTGTCGGTGCAAGTG +
Preference number: 5 (lower is better)
Translates to: PLLQVQPLQMLCQFR*FLLLLGLAELSVQV
Trigger: CACTTGCACCGACAGCTCAGCAAGGCCCAGAAGCAGCAAGAATCACCTGAACTGGCAGAGCATCTGCAGAGGCTGGACCTGAAGGAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp TCAGTCCGGGATCTGGACAGGAACTCCTTCAAGTCAGGCAGCAGCTaGTGGGTCTCCTCCTTGCTGCAGAGCAGAGTGGCGAAGTTGACT +
Preference number: 5 (lower is better)
Translates to: SVRDLDRNSFKSGSS*WVSSLLQSRVAKLT
Trigger: AGTCAACTTCGCCACTCTGCTCTGCAGCAAGGAGGAGACCCAGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTCCAGATCCCGGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 90 bp CCGACAGGCCCTCTAAGGCCTCCAACATCCAGACAGCAGCAGATCTaGAACCGTCCACTAGCTGAGCAAGCTCAGTTGCCTGACAGCCTT +
Preference number: 5 (lower is better)
Translates to: PTGPLRPPTSRQQQI*NRPLAEQAQLPDSL
Trigger: AAGGCTGTCAGGCAACTGAGCTTGCTCAGCTAGTGGACGGTTGCAGATCTGCTGCTGTCTGGATGTTGGAGGCCTTAGAGGGCCTGTCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp TTGGGCCAGTTCCACCAGGTAGGTAGCTCGTGCCCAGGCTCCAGCTaGTGTCTCTTCAGGGCTCAGCTCGAGCAGATCACAGATGATGTT +
Preference number: 5 (lower is better)
Translates to: LGQFHQVGSSCPGSS*CLFRAQLEQITDDV
Trigger: AACATCATCTGTGATCTGCTCGAGCTGAGCCCTGAAGAGACAGCAGCTGGAGCCTGGGCACGAGCTACCTACCTGGTGGAACTGGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp TTCAGGTCCAGCCTCTGCAGATGCTCTGCCAGTTCAGGTGATTCTTaGTGCTTCTGGGCCTTGCTGAGCTGTCGGTGCAAGTGGGTGAGC +
Preference number: 5 (lower is better)
Translates to: FRSSLCRCSASSGDS*CFWALLSCRCKWVS
Trigger: GCTCACCCACTTGCACCGACAGCTCAGCAAGGCCCAGAAGCAGCAAGAATCACCTGAACTGGCAGAGCATCTGCAGAGGCTGGACCTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp ATCACAGATGATGTTGAAGCGCTCCTGCCCAGTGTCAGCCCGTACTaGCTTGTAGGCCCGCAGCTCCTCCCTGAGAAGCAGAGACTGTGT +
Preference number: 5 (lower is better)
Translates to: ITDDVEALLPSVSPY*LVGPQLLPEKQRLC
Trigger: ACACAGTCTCTGCTTCTCAGGGAGGAGCTGCGGGCCTACAAGTCAGTACGGGCTGACACTGGGCAGGAGCGCTTCAACATCATCTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp TCTGTGGAAGACTCGAGCAAGAAGAGAACCTGCTGCAAGTCTGACTaGCAGAGGTCAATGTCACCCCGGGCCAGCTCCAGCTCACCCTTC +
Preference number: 5 (lower is better)
Translates to: SVEDSSKKRTCCKSD*QRSMSPRASSSSPF
Trigger: GAAGGGTGAGCTGGAGCTGGCCCGGGGTGACATTGACCTCTGTCAGTCAGACTTGCAGCAGGTTCTCTTCTTGCTCGAGTCTTCCACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp TTTCCAGATGGTTGTCCACTGGCTCCTCTTCAGGGATACTTCTCATaGTCTCGGGTCCCTGGCTGGCCCAGACACAGAGGGGTGCTTTGG +
Preference number: 5 (lower is better)
Translates to: FPDGCPLAPLQGYFS*SRVPGWPRHRGVLW
Trigger: CCAAAGCACCCCTCTGTGTCTGGGCCAGCCAGGGACCCGAGATCATGAGAAGTATCCCTGAAGAGGAGCCAGTGGACAACCATCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp AGCTGGGTAAGCTGGCAGGAAGAGCTGGCTGCCTTTGCGTGGTCCTaGAGTCTCTTAGATACAATCTGCAGGAGCAGGAGGGTCTCCAGA +
Preference number: 5 (lower is better)
Translates to: SWVSWQEELAAFAWS*SLLDTICRSRRVSR
Trigger: TCTGGAGACCCTCCTGCTCCTGCAGATTGTATCTAAGAGACTGCAGGACCACGCAAAGGCAGCCAGCTCTTCCTGCCAGCTTACCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp CCCACTAGGGATCAGAGCCAGGCGCTCCTGGAAACTCTCCTTCTCTaGCTGGGGGAAGCAGCCAGATCCCAAAGCCTTAAAGGAAAAGAG +
Preference number: 5 (lower is better)
Translates to: PTRDQSQALLETLLL*LGEAARSQSLKGKE
Trigger: CTCTTTTCCTTTAAGGCTTTGGGATCTGGCTGCTTCCCCCAGGCAGAGAAGGAGAGTTTCCAGGAGCGCCTGGCTCTGATCCCTAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp TTCTTTCGGCATCTGTTCGGCTGCTGGGGAAATCAGTCCGGGATCTaGACAGGAACTCCTTCAAGTCAGGCAGCAGCTGCTGGGTCTCCT +
Preference number: 5 (lower is better)
Translates to: FFRHLFGCWGNQSGI*TGTPSSQAAAAGSP
Trigger: AGGAGACCCAGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTCCAGATCCCGGACTGATTTCCCCAGCAGCCGAACAGATGCCGAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 90 bp CTGCCAGGTCCAAAATACTCCTCAGGTGCCCAGGGCAATCGAGCTTaGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATGGTATCGCAAA +
Preference number: 5 (lower is better)
Translates to: LPGPKYSSGAQGNRA*QSTAGCKPSGWYRK
Trigger: TTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTATTTTGGACCTGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 90 bp AAATATGGTGAAAGGGACACGAGGGCCAGCTTGCCTAGCCCGACCTaGAGGCTTAGGGGTACAAGGTGGCCCTTCCTCTTCCAGACCTTT +
Preference number: 5 (lower is better)
Translates to: KYGERDTRASLPSPT*RLRGTRWPFLFQTF
Trigger: AAAGGTCTGGAAGAGGAAGGGCCACCTTGTACCCCTAAGCCTCCAGGTCGGGCTAGGCAAGCTGGCCCTCGTGTCCCTTTCACCATATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp ATAGCAACCACCGCATCTGTCTTTAAGCTACGTCCCTTCCTAGTTTaGCCCCGGGTACGGGAAGCAGTCCCTCGCCTCTTAGGCTCCTCT +
Preference number: 5 (lower is better)
Translates to: IATTASVFKLRPFLV*PRVREAVPRLLGSS
Trigger: AGAGGAGCCTAAGAGGCGAGGGACTGCTTCCCGTACCCGGGGCCAAACTAGGAAGGGACGTAGCTTAAAGACAGATGCGGTGGTTGCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp ACAAGCACCCGACGTTGCCGAGCCCAAGTGCTGACAGACTGGCTCTaGGATGACGCAGGCCTCCTCATAGAGCTTCTGACTAAAGAAGCT +
Preference number: 5 (lower is better)
Translates to: TSTRRCRAQVLTDWL*DDAGLLIELLTKEA
Trigger: AGCTTCTTTAGTCAGAAGCTCTATGAGGAGGCCTGCGTCATCTCAGAGCCAGTCTGTCAGCACTTGGGCTCGGCAACGTCGGGTGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp AAACTCTGTGGAAGACTCGAGCAAGAAGAGAACCTGCTGCAAGTCTaGCTGACAGAGGTCAATGTCACCCCGGGCCAGCTCCAGCTCACC +
Preference number: 5 (lower is better)
Translates to: KLCGRLEQEENLLQV*LTEVNVTPGQLQLT
Trigger: GGTGAGCTGGAGCTGGCCCGGGGTGACATTGACCTCTGTCAGTCAGACTTGCAGCAGGTTCTCTTCTTGCTCGAGTCTTCCACAGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp TTCAGGAAGGGCTCCTCCTCTGACAGGGGTGGGAAACATGGGCCTTaGGCCTTATGCTTCCCTTTCTGCGTGTGCACCTTCTTCACTGAG +
Preference number: 5 (lower is better)
Translates to: FRKGSSSDRGGKHGP*ALCFPFCVCTFFTE
Trigger: CTCAGTGAAGAAGGTGCACACGCAGAAAGGGAAGCATAAGGCTCAAGGCCCATGTTTCCCACCCCTGTCAGAGGAGGAGCCCTTCCTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp GCTTGCAAAGAGTTCGGAAGTACAGCAGCTGAAGTGGGCCAGCTTTaGAAGGGCCTGAACCAAGAGCAGGTGGGCTCTCCAGATCTCCAA +
Preference number: 5 (lower is better)
Translates to: ACKEFGSTAAEVGQL*KGLNQEQVGSPDLQ
Trigger: TTGGAGATCTGGAGAGCCCACCTGCTCTTGGTTCAGGCCCTTGCAAAGCTGGCCCACTTCAGCTGCTGTACTTCCGAACTCTTTGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp GGTGGAAACCCTGGAAGTGCATCTGAAGCAAGCACTGCTGCTGCTTaGAAGATGCTTCAGAGACTTCTCTCAGGTGCCGGACAAGGGAGC +
Preference number: 5 (lower is better)
Translates to: GGNPGSASEASTAAA*KMLQRLLSGAGQGS
Trigger: GCTCCCTTGTCCGGCACCTGAGAGAAGTCTCTGAAGCATCTTCCAAGCAGCAGCAGTGCTTGCTTCAGATGCACTTCCAGGGTTTCCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp AAGAGTAGCTGGGTAAGCTGGCAGGAAGAGCTGGCTGCCTTTGCGTaGTCCTGCAGTCTCTTAGATACAATCTGCAGGAGCAGGAGGGTC +
Preference number: 5 (lower is better)
Translates to: KSSWVSWQEELAAFA*SCSLLDTICRSRRV
Trigger: GACCCTCCTGCTCCTGCAGATTGTATCTAAGAGACTGCAGGACCACGCAAAGGCAGCCAGCTCTTCCTGCCAGCTTACCCAGCTACTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp TCCTCAGGTGCCCAGGGCAATCGAGCTTGGCAGTCAACTGCTGGGTaGAAGCCCTCAGGATGGTATCGCAAATTTGTCTTCTTTCGGCAT +
Preference number: 5 (lower is better)
Translates to: SSGAQGNRAWQSTAG*KPSGWYRKFVFFRH
Trigger: ATGCCGAAAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 90 bp ACTGTTGATAAGAACGGCTGCTGCCTTCCTCAGAAGCTGGGCCACTaGCCCTGGTCTTTCTTCTACAGCTTCCAACAGCTCAACCCCCAT +
Preference number: 5 (lower is better)
Translates to: TVDKNGCCLPQKLGH*PWSFFYSFQQLNPH
Trigger: ATGGGGGTTGAGCTGTTGGAAGCTGTAGAAGAAAGACCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCCGTTCTTATCAACAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp GGCAATCGAGCTTGGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATaGTATCGCAAATTTGTCTTCTTTCGGCATCTGTTCGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: GNRAWQSTAGCKPSG*YRKFVFFRHLFGCW
Trigger: CCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 90 bp ATACTCCTCAGGTGCCCAGGGCAATCGAGCTTGGCAGTCAACTGCTaGGTGCAAGCCCTCAGGATGGTATCGCAAATTTGTCTTCTTTCG +
Preference number: 5 (lower is better)
Translates to: ILLRCPGQSSLAVNC*VQALRMVSQICLLS
Trigger: CGAAAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 90 bp TCCTGCCCTGGATGCATCCATTTTGACTCGAACCCAGAAAGTGACTaGCTCGACCATGTGTTCCAGACTGTAGGGTTTCAGAGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: SCPGCIHFDSNPESD*LDHVFQTVGFQSCQ
Trigger: CTGGCAGCTCTGAAACCCTACAGTCTGGAACACATGGTCGAGCCAGTCACTTTCTGGGTTCGAGTCAAAATGGATGCATCCAGGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp TGCAGGGCCTGGACACGTAGCAAGTACCAAGCCTTAGATGACTTCTaGAGGGCAGGATCCCGAAGCACAGAAAGCAACAAAGAAACGCCT +
Preference number: 5 (lower is better)
Translates to: CRAWTRSKYQALDDF*RAGSRSTESNKETP
Trigger: AGGCGTTTCTTTGTTGCTTTCTGTGCTTCGGGATCCTGCCCTCCAGAAGTCATCTAAGGCTTGGTACTTGCTACGTGTCCAGGCCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GCTCAGTTGCCTGACAGCCTTGAGCAAAGTCATACACAATCCCGGTaGAGAGGTGGAAACCCTGGAAGTGCATCTGAAGCAAGCACTGCT +
Preference number: 5 (lower is better)
Translates to: AQLPDSLEQSHTQSR*RGGNPGSASEASTA
Trigger: AGCAGTGCTTGCTTCAGATGCACTTCCAGGGTTTCCACCTCTTCACCGGGATTGTGTATGACTTTGCTCAAGGCTGTCAGGCAACTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GCCTTGAGCCTTATGCTTCCCTTTCTGCGTGTGCACCTTCTTCACTaGGTCTGGATGCTGGGTCACAACACCAAACTCTGTGGAAGACTC +
Preference number: 5 (lower is better)
Translates to: ALSLMLPFLRVHLLH*VWMLGHNTKLCGRL
Trigger: GAGTCTTCCACAGAGTTTGGTGTTGTGACCCAGCATCCAGACTCAGTGAAGAAGGTGCACACGCAGAAAGGGAAGCATAAGGCTCAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp GTCAGAAATGGAATCCAGGGTAGAAAGATCAATGGGTGCAGGAACTaGGAAGGGTGGGAGCCAAGGACTAGGGTCACTATTGGCCTCCGT +
Preference number: 5 (lower is better)
Translates to: VRNGIQGRKINGCRN*EGWEPRTRVTIGLR
Trigger: ACGGAGGCCAATAGTGACCCTAGTCCTTGGCTCCCACCCTTCTCAGTTCCTGCACCCATTGATCTTTCTACCCTGGATTCCATTTCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp CCCCCAAGAAAAGCAAAGAGACTCAATATGGCATCAAGTCCACAGTaGCTCCTGATGCCTCTCTCCAGGCCTGAAAGGAAGAACTGGCAG +
Preference number: 5 (lower is better)
Translates to: PPRKAKRLNMASSPQ*LLMPLSRPERKNWQ
Trigger: CTGCCAGTTCTTCCTTTCAGGCCTGGAGAGAGGCATCAGGAGGCACTGTGGACTTGATGCCATATTGAGTCTCTTTGCTTTTCTTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp AAGCACTGCTGCTGCTTGGAAGATGCTTCAGAGACTTCTCTCAGGTaGCGGACAAGGGAGCTGTATCCCCCAAGAAAAGCAAAGAGACTC +
Preference number: 5 (lower is better)
Translates to: KHCCCLEDASETSLR*RTRELYPPRKAKRL
Trigger: GAGTCTCTTTGCTTTTCTTGGGGGATACAGCTCCCTTGTCCGGCACCTGAGAGAAGTCTCTGAAGCATCTTCCAAGCAGCAGCAGTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp AAAATACTCCTCAGGTGCCCAGGGCAATCGAGCTTGGCAGTCAACTaGTGGGTGCAAGCCCTCAGGATGGTATCGCAAATTTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: KILLRCPGQSSLAVN*WVQALRMVSQICLL
Trigger: AAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 90 bp CCAGTGCCAGCCGGCCCGTCCACCATACTCGTTTCTCAGTACAGCTaGTGTTTTCTTTTTGGTCCTTCTGGATGGCATCAAACTCTTTCA +
Preference number: 5 (lower is better)
Translates to: PVPAGPSTILVSQYS*CFLFGPSGWHQTLS
Trigger: TGAAAGAGTTTGATGCCATCCAGAAGGACCAAAAAGAAAACAGCAGCTGTACTGAGAAACGAGTATGGTGGACGGGCCGGCTGGCACTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 90 bp GGATGGTATCGCAAATTTGTCTTCTTTCGGCATCTGTTCGGCTGCTaGGGAAATCAGTCCGGGATCTGGACAGGAACTCCTTCAAGTCAG +
Preference number: 5 (lower is better)
Translates to: GWYRKFVFFRHLFGC*GNQSGIWTGTPSSQ
Trigger: CTGACTTGAAGGAGTTCCTGTCCAGATCCCGGACTGATTTCCCCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCGATACCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 90 bp TGCTTCCCTTTCTGCGTGTGCACCTTCTTCACTGAGTCTGGATGCTaGGTCACAACACCAAACTCTGTGGAAGACTCGAGCAAGAAGAGA +
Preference number: 5 (lower is better)
Translates to: CFPFCVCTFFTESGC*VTTPNSVEDSSKKR
Trigger: TCTCTTCTTGCTCGAGTCTTCCACAGAGTTTGGTGTTGTGACCCAGCATCCAGACTCAGTGAAGAAGGTGCACACGCAGAAAGGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 90 bp CCCACTTGGAGGGCAGTGACTAACACCACGGAAAGCAATGCTCAATaGGTCAGAAATGGAATCCAGGGTAGAAAGATCAATGGGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PTWRAVTNTTESNAQ*VRNGIQGRKINGCR
Trigger: CCTGCACCCATTGATCTTTCTACCCTGGATTCCATTTCTGACTCATTGAGCATTGCTTTCCGTGGTGTTAGTCACTGCCCTCCAAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 90 bp TCAGGATGGTATCGCAAATTTGTCTTCTTTCGGCATCTGTTCGGCTaGTGGGGAAATCAGTCCGGGATCTGGACAGGAACTCCTTCAAGT +
Preference number: 5 (lower is better)
Translates to: SGWYRKFVFFRHLFG*WGNQSGIWTGTPSS
Trigger: ACTTGAAGGAGTTCCTGTCCAGATCCCGGACTGATTTCCCCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCGATACCATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 90 bp GACCTTCCCCAGGCTCTTTTCAGATGTCTGATTCAGGAACTCCAATaGCAAGTGCGTGTACACTTGAGCCATGATCTCATCAAAGAGGCT +
Preference number: 5 (lower is better)
Translates to: DLPQALFRCLIQELQ*QVRVHLSHDLIKEA
Trigger: AGCCTCTTTGATGAGATCATGGCTCAAGTGTACACGCACTTGGCATTGGAGTTCCTGAATCAGACATCTGAAAAGAGCCTGGGGAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp AGGGCCACCGCCCGGCAGCTCAGCCGCAGGACAGCCTaGCCATCAAGGAAGCGGGCACCGGCTCCGTGCCCT +
Preference number: 6 (lower is better)
Translates to: RATARQLSRRTA*PSRKRAPAPCP
Trigger: AGGGCACGGAGCCGGTGCCCGCTTCCTTGATGGGCAGGCTGTCCTGCGGCTGAGCTGCCGGGCGGTGGCCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp CTCCCTCCAGGTTTCCATGCACGGCAAGGGCTGCACTaGTGCAGCCGAACAGCAGGGCCACCGCCCGGCAGC +
Preference number: 6 (lower is better)
Translates to: LPPGFHARQGLH*CSRTAGPPPGS
Trigger: GCTGCCGGGCGGTGGCCCTGCTGTTCGGCTGCAGCAGTGCAGCCCTTGCCGTGCATGGAAACCTGGAGGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GGCCTCCTGGCTCTGAACCTGTCCTACTGCCTCGCTCAGGAGCACTaGGGCTCGGTCAGGCTGGGCTGGGCACAGCCCACACGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: GLLALNLSYCLAQEH*GSVRLGWAQPTRQG
Trigger: GCCTTGGCGTGTGGGCTGTGCCCAGCCCAGCCTGACCGAGCCCAAGTGCTCCTGAGCGAGGCAGTAGGACAGGTTCAGAGCCAGGAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp ACCAGCTCCCTCCAGGTTTCCATGCACGGCAAGGGCTaGACTGCTGCAGCCGAACAGCAGGGCCACCGCCCG +
Preference number: 6 (lower is better)
Translates to: TSSLQVSMHGKG*TAAAEQQGHRP
Trigger: CGGGCGGTGGCCCTGCTGTTCGGCTGCAGCAGTGCAGCCCTTGCCGTGCATGGAAACCTGGAGGGAGCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GCAGCCCAGCACCTGTTCCTCCAGGGCGGTGATGAGTaGCTCCATCCTTTGGTCCAGTGCCAGCCGGCCCGT +
Preference number: 6 (lower is better)
Translates to: AAQHLFLQGGDE*LHPLVQCQPAR
Trigger: ACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTGGAGGAACAGGTGCTGGGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp ACGGCCGCTAGGATTTGCAGGGAGGCTGCAGTCTGCTaGAGACACCGCACAGCTGGGGCTCGCCCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: TAARICREAAVC*RHRTAGARPLV
Trigger: CACCAAGGGGCGAGCCCCAGCTGTGCGGTGTCTCCAGCAGACTGCAGCCTCCCTGCAAATCCTAGCGGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CTCGCTCAGGAGCACTTGGGCTCGGTCAGGCTGGGCTaGGCACAGCCCACACGCCAAGGCCTGAACATCCTG +
Preference number: 6 (lower is better)
Translates to: LAQEHLGSVRLG*AQPTRQGLNIL
Trigger: CAGGATGTTCAGGCCTTGGCGTGTGGGCTGTGCCCAGCCCAGCCTGACCGAGCCCAAGTGCTCCTGAGCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GAGCTTTGTGACCGGTGGCCAGCCTCACTCCGGCAGTaGCCAGCACCCAGCGCAGACAGACTGCTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: ELCDRWPASLRQ*PAPSADRLLRG
Trigger: CCCTCTCAGCAGTCTGTCTGCGCTGGGTGCTGGTCACTGCCGGAGTGAGGCTGGCCACCGGTCACAAAGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp TCAGGCTGGGCTGGGCACAGCCCACACGCCAAGGCCTaGACATCCTGGCTGGTGAGGATTCTGGCCCCACTA +
Preference number: 6 (lower is better)
Translates to: SGWAGHSPHAKA*TSWLVRILAPL
Trigger: TAGTGGGGCCAGAATCCTCACCAGCCAGGATGTTCAGGCCTTGGCGTGTGGGCTGTGCCCAGCCCAGCCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GGGCGACGGCGCCTCGATACTGTTGATAAGAACGGCTaGTGCCTTCCTCAGAAGCTGGGCCACTGCCCCTGG +
Preference number: 6 (lower is better)
Translates to: GRRRLDTVDKNG*CLPQKLGHCPW
Trigger: CCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCCGTTCTTATCAACAGTATCGAGGCGCCGTCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp ACTTCGAGGGGCCTCCTGGCTCTGAACCTGTCCTACTaGCTCGCTCAGGAGCACTTGGGCTCGGTCAGGCTG +
Preference number: 6 (lower is better)
Translates to: TSRGLLALNLSY*LAQEHLGSVRL
Trigger: CAGCCTGACCGAGCCCAAGTGCTCCTGAGCGAGGCAGTAGGACAGGTTCAGAGCCAGGAGGCCCCTCGAAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CAGGGAGGCTGCAGTCTGCTGGAGACACCGCACAGCTaGGGCTCGCCCCTTGGTGAGCACTTCTTTCCACAG +
Preference number: 6 (lower is better)
Translates to: QGGCSLLETPHS*GSPLGEHFFPQ
Trigger: CTGTGGAAAGAAGTGCTCACCAAGGGGCGAGCCCCAGCTGTGCGGTGTCTCCAGCAGACTGCAGCCTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CAGGTCAGGGACAGCAGCTGGCACGCGTCACTTGTCTaGTCCAGGCTCCTCAGGCTTGACTCCGCCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QVRDSSWHASLV*SRLLRLDSASS
Trigger: GGAAGAGGCGGAGTCAAGCCTGAGGAGCCTGGACCAGACAAGTGACGCGTGCCAGCTGCTGTCCCTGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp AAGCGGAAGGAGGGCAGCCGGGTGACCGGCTGTGCTTaGAGGATGGGCGTGCTTTCCCAAGGCAGCTTTTGC +
Preference number: 6 (lower is better)
Translates to: KRKEGSRVTGCA*RMGVLSQGSFC
Trigger: GCAAAAGCTGCCTTGGGAAAGCACGCCCATCCTCCAAGCACAGCCGGTCACCCGGCTGCCCTCCTTCCGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000229942.2
CDS CAA 72 bp CTGTTCCTCCAGGGCGGTGATGAGTGCCTCCATCCTTaGGTCCAGTGCCAGCCGGCCCGTCCACCATACTCG +
Preference number: 6 (lower is better)
Translates to: LFLQGGDECLHP*VQCQPARPPYS
Trigger: CGAGTATGGTGGACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTGGAGGAACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GAAGCGGAAGGAGGGCAGCCGGGTGACCGGCTGTGCTaGGAGGATGGGCGTGCTTTCCCAAGGCAGCTTTTG +
Preference number: 6 (lower is better)
Translates to: EAEGGQPGDRLC*EDGRAFPRQLL
Trigger: CAAAAGCTGCCTTGGGAAAGCACGCCCATCCTCCAAGCACAGCCGGTCACCCGGCTGCCCTCCTTCCGCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000229942.2
CDS CAA 90 bp GAGGCTGCAGTCTGCTGGAGACACCGCACAGCTGGGGCTCGCCCCTaGGTGAGCACTTCTTTCCACAGAGTCAGGGCCTGGTCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: EAAVCWRHRTAGARP*VSTSFHRVRAWSRH
Trigger: ATGCCTGGACCAGGCCCTGACTCTGTGGAAAGAAGTGCTCACCAAGGGGCGAGCCCCAGCTGTGCGGTGTCTCCAGCAGACTGCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GCTGAGCAGGAAGCGGAAGGAGGGCAGCCGGGTGACCGGCTGTGCTaGGAGGATGGGCGTGCTTTCCCAAGGCAGCTTTTGCAGGTCCTT +
Preference number: 6 (lower is better)
Translates to: AEQEAEGGQPGDRLC*EDGRAFPRQLLQVL
Trigger: AAGGACCTGCAAAAGCTGCCTTGGGAAAGCACGCCCATCCTCCAAGCACAGCCGGTCACCCGGCTGCCCTCCTTCCGCTTCCTGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000229942.2
CDS CAA 90 bp CTGTGTGAAGCGCTTGGTGGCTGCAGGGCAACGCGTCAGCACAGCTaGCAGCAGATCCAGACCCTGAGCTTTGTGACCGGTGGCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LCEALGGCRATRQHS*QQIQTLSFVTGGQP
Trigger: AGGCTGGCCACCGGTCACAAAGCTCAGGGTCTGGATCTGCTGCAAGCTGTGCTGACGCGTTGCCCTGCAGCCACCAAGCGCTTCACACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GCCCAGCACCTGTTCCTCCAGGGCGGTGATGAGTGCCTCCATCCTTaGGTCCAGTGCCAGCCGGCCCGTCCACCATACTCGTTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: AQHLFLQGGDECLHP*VQCQPARPPYSFLS
Trigger: ACTGAGAAACGAGTATGGTGGACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTGGAGGAACAGGTGCTGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GGTGGTTCCAGCAGAGCCGACGGCAGTGTTCCAGGGTaGTTTCCAAGAGGCAGAGGGCCCTCTGAGGCGAGA +
Preference number: 6 (lower is better)
Translates to: GGSSRADGSVPG*FPRGRGPSEAR
Trigger: TCTCGCCTCAGAGGGCCCTCTGCCTCTTGGAAATCACCCTGGAACACTGCCGTCGGCTCTGCTGGAACCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp CAGCACTTGGGCCAGTTCCACCAGGTAGGTAGCTCGTaGCCAGGCTCCAGCTGCTGTCTCTTCAGGGCTCAG +
Preference number: 6 (lower is better)
Translates to: QHLGQFHQVGSS*PGSSCCLFRAQ
Trigger: CTGAGCCCTGAAGAGACAGCAGCTGGAGCCTGGGCACGAGCTACCTACCTGGTGGAACTGGCCCAAGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CTCCTGATGCCTCTCTCCAGGCCTGAAAGGAAGAACTaGCAGCTGTCGTACAATGCCCGGAGCGGGGGCGAC +
Preference number: 6 (lower is better)
Translates to: LLMPLSRPERKN*QLSYNARSGGD
Trigger: GTCGCCCCCGCTCCGGGCATTGTACGACAGCTGCCAGTTCTTCCTTTCAGGCCTGGAGAGAGGCATCAGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp GAAAGGGACACGAGGGCCAGCTTGCCTAGCCCGACCTaGAGGCTTAGGGGTACAAGGTGGCCCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: ERDTRASLPSPT*RLRGTRWPFLF
Trigger: GAAGAGGAAGGGCCACCTTGTACCCCTAAGCCTCCAGGTCGGGCTAGGCAAGCTGGCCCTCGTGTCCCTTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TGTTCCTCCAGGGCGGTGATGAGTGCCTCCATCCTTTaGTCCAGTGCCAGCCGGCCCGTCCACCATACTCGT +
Preference number: 6 (lower is better)
Translates to: CSSRAVMSASIL*SSASRPVHHTR
Trigger: ACGAGTATGGTGGACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTGGAGGAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CATTCCCGCAGCAGCTCTTGTAGTTTGGAGGCCTCCTaGGCAAGGCTGGGGTCAGCACTGCATGGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: HSRSSSCSLEAS*ARLGSALHGSS
Trigger: GCTGCTGCCATGCAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp AATGCCCGGAGCGGGGGCGACGGCGCCTCGATACTGTaGATAAGAACGGCTGCTGCCTTCCTCAGAAGCTGG +
Preference number: 6 (lower is better)
Translates to: NARSGGDGASIL*IRTAAAFLRSW
Trigger: CCAGCTTCTGAGGAAGGCAGCAGCCGTTCTTATCAACAGTATCGAGGCGCCGTCGCCCCCGCTCCGGGCATT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GCGCTTGGTGGCTGCAGGGCAACGCGTCAGCACAGCTaGCAGCAGATCCAGACCCTGAGCTTTGTGACCGGT +
Preference number: 6 (lower is better)
Translates to: ALGGCRATRQHS*QQIQTLSFVTG
Trigger: ACCGGTCACAAAGCTCAGGGTCTGGATCTGCTGCAAGCTGTGCTGACGCGTTGCCCTGCAGCCACCAAGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp TGTTCCAGGGTGATTTCCAAGAGGCAGAGGGCCCTCTaGGGCGAGAGAGGACCGGGAGAGCTACCACCCTCA +
Preference number: 6 (lower is better)
Translates to: CSRVISKRQRAL*GERGPGELPPS
Trigger: TGAGGGTGGTAGCTCTCCCGGTCCTCTCTCGCCTCAGAGGGCCCTCTGCCTCTTGGAAATCACCCTGGAACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp TCAGGACAAGCACCCGACGTTGCCGAGCCCAAGTGCTaGCAGACTGGCTCTGAGATGACGCAGGCCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SGQAPDVAEPKC*QTGSEMTQASS
Trigger: TGAGGAGGCCTGCGTCATCTCAGAGCCAGTCTGTCAGCACTTGGGCTCGGCAACGTCGGGTGCTTGTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GATGTTGAAGCGCTCCTGCCCAGTGTCAGCCCGTACTaGCTTGTAGGCCCGCAGCTCCTCCCTGAGAAGCAG +
Preference number: 6 (lower is better)
Translates to: DVEALLPSVSPY*LVGPQLLPEKQ
Trigger: CTGCTTCTCAGGGAGGAGCTGCGGGCCTACAAGTCAGTACGGGCTGACACTGGGCAGGAGCGCTTCAACATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GGGACACCTCCGGGCCTCTCCTTCAGGTCCAGCCTCTaGAGATGCTCTGCCAGTTCAGGTGATTCTTGCTGC +
Preference number: 6 (lower is better)
Translates to: GTPPGLSFRSSL*RCSASSGDSCC
Trigger: GCAGCAAGAATCACCTGAACTGGCAGAGCATCTGCAGAGGCTGGACCTGAAGGAGAGGCCCGGAGGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp CAGGGCGGTGATGAGTGCCTCCATCCTTTGGTCCAGTaGCAGCCGGCCCGTCCACCATACTCGTTTCTCAGT +
Preference number: 6 (lower is better)
Translates to: QGGDECLHPLVQ*QPARPPYSFLS
Trigger: ACTGAGAAACGAGTATGGTGGACGGGCCGGCTGGCACTGGACCAAAGGATGGAGGCACTCATCACCGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TCTTCTCTAGGTGATTACGAGCCCTCTCCACTGCTCTaGCAGCCTGGCGGTGGTGGTGGTTCCAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: SSLGDYEPSPLL*QPGGGGGSSRA
Trigger: GGCTCTGCTGGAACCACCACCACCGCCAGGCTGCCAGAGCAGTGGAGAGGGCTCGTAATCACCTAGAGAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TCACTGTCATCACTGAAGATCACCTTGAGGCGAGTCTaGGCCCGCCTGTGGACCCTGGGAGCCAAGGGAACC +
Preference number: 6 (lower is better)
Translates to: SLSSLKITLRRV*ARLWTLGAKGT
Trigger: GGTTCCCTTGGCTCCCAGGGTCCACAGGCGGGCCCAGACTCGCCTCAAGGTGATCTTCAGTGATGACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CAGCCAGATCCCAAAGCCTTAAAGGAAAAGAGGCGCTaGATACGGGCCAGTGGGACACCTCCGGGCCTCTCC +
Preference number: 6 (lower is better)
Translates to: QPDPKALKEKRR*IRASGTPPGLS
Trigger: GGAGAGGCCCGGAGGTGTCCCACTGGCCCGTATCCAGCGCCTCTTTTCCTTTAAGGCTTTGGGATCTGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp ATTCCCAGCCACATTCCCGCAGCAGCTCTTGTAGTTTaGAGGCCTCCTGGGCAAGGCTGGGGTCAGCACTGC +
Preference number: 6 (lower is better)
Translates to: IPSHIPAAALVV*RPPGQGWGQHC
Trigger: GCAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAATGTGGCTGGGAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GGCAGAGCAGTTGGTCTGCTGGGTAAAGTTGTGGTAGCACAGCACTaGGGCCAGTTCCACCAGGTAGGTAGCTCGTGCCCAGGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: GRAVGLLGKVVVAQH*GQFHQVGSSCPGSS
Trigger: GCTGGAGCCTGGGCACGAGCTACCTACCTGGTGGAACTGGCCCAAGTGCTGTGCTACCACAACTTTACCCAGCAGACCAACTGCTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp CCAAGAGCAGGTGGGCTCTCCAGATCTCCAAGCTCTGTATCCGTGTaGCCACAAACTTCAGCCCCGACGCCAGGACCTTCCCCAGGCTCT +
Preference number: 6 (lower is better)
Translates to: PRAGGLSRSPSSVSV*PQTSAPTPGPSPGS
Trigger: AGAGCCTGGGGAAGGTCCTGGCGTCGGGGCTGAAGTTTGTGGCAACACGGATACAGAGCTTGGAGATCTGGAGAGCCCACCTGCTCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GCCCGCCTGTGGACCCTGGGAGCCAAGGGAACCTGGAGCTTGCTCTaGGTGGGGTGGACTTCTTCAAATATGGTGAAAGGGACACGAGGG +
Preference number: 6 (lower is better)
Translates to: ARLWTLGAKGTWSLL*VGWTSSNMVKGTRG
Trigger: CCCTCGTGTCCCTTTCACCATATTTGAAGAAGTCCACCCCACCAAGAGCAAGCTCCAGGTTCCCTTGGCTCCCAGGGTCCACAGGCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GAGTCAGGATATTCCCAGCCACATTCCCGCAGCAGCTCTTGTAGTTaGGAGGCCTCCTGGGCAAGGCTGGGGTCAGCACTGCATGGCAGC +
Preference number: 6 (lower is better)
Translates to: ESGYSQPHSRSSSCS*EASWARLGSALHGS
Trigger: GCTGCCATGCAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAATGTGGCTGGGAATATCCTGACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp ACGCCTGCAGTTACCTTCTGGCAAGCCCAGCAGAGCTaGCTTCCAAGCAGAGCACAGGTCAGGGACAGCAGC +
Preference number: 6 (lower is better)
Translates to: TPAVTFWQAQQS*LPSRAQVRDSS
Trigger: GCTGCTGTCCCTGACCTGTGCTCTGCTTGGAAGTCAGCTCTGCTGGGCTTGCCAGAAGGTAACTGCAGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GGTTGTCCACTGGCTCCTCTTCAGGGATACTTCTCATaGTCTCGGGTCCCTGGCTGGCCCAGACACAGAGGG +
Preference number: 6 (lower is better)
Translates to: GCPLAPLQGYFS*SRVPGWPRHRG
Trigger: CCCTCTGTGTCTGGGCCAGCCAGGGACCCGAGATCATGAGAAGTATCCCTGAAGAGGAGCCAGTGGACAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GATCTGGACAGGAACTCCTTCAAGTCAGGCAGCAGCTaGTGGGTCTCCTCCTTGCTGCAGAGCAGAGTGGCG +
Preference number: 6 (lower is better)
Translates to: DLDRNSFKSGSS*WVSSLLQSRVA
Trigger: CGCCACTCTGCTCTGCAGCAAGGAGGAGACCCAGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTCCAGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 72 bp CAGGCCAGCTCTGCCAGGTCCAAAATACTCCTCAGGTaGCCAGGGCAATCGAGCTTGGCAGTCAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: QASSARSKILLR*PGQSSLAVNCW
Trigger: CCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTATTTTGGACCTGGCAGAGCTGGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 72 bp TTCCACCAGGTAGGTAGCTCGTGCCCAGGCTCCAGCTaGTGTCTCTTCAGGGCTCAGCTCGAGCAGATCACA +
Preference number: 6 (lower is better)
Translates to: FHQVGSSCPGSS*CLFRAQLEQIT
Trigger: TGTGATCTGCTCGAGCTGAGCCCTGAAGAGACAGCAGCTGGAGCCTGGGCACGAGCTACCTACCTGGTGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GTGGGCTCTCCAGATCTCCAAGCTCTGTATCCGTGTTaGCACAAACTTCAGCCCCGACGCCAGGACCTTCCC +
Preference number: 6 (lower is better)
Translates to: VGSPDLQALYPC*HKLQPRRQDLP
Trigger: GGGAAGGTCCTGGCGTCGGGGCTGAAGTTTGTGGCAACACGGATACAGAGCTTGGAGATCTGGAGAGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp TACTTGAGCACGATACCAGCTCCCTCCAGGTTTCCATaGACGGCAAGGGCTGCACTGCTGCAGCCGAACAGC +
Preference number: 6 (lower is better)
Translates to: YLSTIPAPSRFP*TARAALLQPNS
Trigger: GCTGTTCGGCTGCAGCAGTGCAGCCCTTGCCGTGCATGGAAACCTGGAGGGAGCTGGTATCGTGCTCAAGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CTGGACAGGAACTCCTTCAAGTCAGGCAGCAGCTGCTaGGTCTCCTCCTTGCTGCAGAGCAGAGTGGCGAAG +
Preference number: 6 (lower is better)
Translates to: LDRNSFKSGSSC*VSSLLQSRVAK
Trigger: CTTCGCCACTCTGCTCTGCAGCAAGGAGGAGACCCAGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTCCAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp GGCTGCTGCCTTCCTCAGAAGCTGGGCCACTGCCCCTaGTCTTTCTTCTACAGCTTCCAACAGCTCAACCCC +
Preference number: 6 (lower is better)
Translates to: GCCLPQKLGHCP*SFFYSFQQLNP
Trigger: GGGGTTGAGCTGTTGGAAGCTGTAGAAGAAAGACCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CTGGGACAGCCAAGGTTCAAGAGTAGCTGGGTAAGCTaGCAGGAAGAGCTGGCTGCCTTTGCGTGGTCCTGC +
Preference number: 6 (lower is better)
Translates to: LGQPRFKSSWVS*QEELAAFAWSC
Trigger: GCAGGACCACGCAAAGGCAGCCAGCTCTTCCTGCCAGCTTACCCAGCTACTCTTGAACCTTGGCTGTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GCTTCTCAGGAGGCACTTCAGGACAAGCACCCGACGTaGCCGAGCCCAAGTGCTGACAGACTGGCTCTGAGA +
Preference number: 6 (lower is better)
Translates to: ASQEALQDKHPT*PSPSADRLALR
Trigger: TCTCAGAGCCAGTCTGTCAGCACTTGGGCTCGGCAACGTCGGGTGCTTGTCCTGAAGTGCCTCCTGAGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GGTGGGCTCTCCAGATCTCCAAGCTCTGTATCCGTGTaGCCACAAACTTCAGCCCCGACGCCAGGACCTTCC +
Preference number: 6 (lower is better)
Translates to: GGLSRSPSSVSV*PQTSAPTPGPS
Trigger: GGAAGGTCCTGGCGTCGGGGCTGAAGTTTGTGGCAACACGGATACAGAGCTTGGAGATCTGGAGAGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp AGGTCTTCCAGGTCACTGTCATCACTGAAGATCACCTaGAGGCGAGTCTGGGCCCGCCTGTGGACCCTGGGA +
Preference number: 6 (lower is better)
Translates to: RSSRSLSSLKIT*RRVWARLWTLG
Trigger: TCCCAGGGTCCACAGGCGGGCCCAGACTCGCCTCAAGGTGATCTTCAGTGATGACAGTGACCTGGAAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp TATTCCCAGCCACATTCCCGCAGCAGCTCTTGTAGTTaGGAGGCCTCCTGGGCAAGGCTGGGGTCAGCACTG +
Preference number: 6 (lower is better)
Translates to: YSQPHSRSSSCS*EASWARLGSAL
Trigger: CAGTGCTGACCCCAGCCTTGCCCAGGAGGCCTCCAAACTACAAGAGCTGCTGCGGGAATGTGGCTGGGAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp TGCCATCCTCCAAGAGCACCAAGAAGCTCAAGGCATTCAGCCGAGTaGAGAACGCAGCTCGCCGCTCCAACAGTGCCTCTGCTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: CHPPRAPRSSRHSAE*RTQLAAPTVPLLPS
Trigger: GGAAGGGAGCAGAGGCACTGTTGGAGCGGCGAGCTGCGTTCTCAACTCGGCTGAATGCCTTGAGCTTCTTGGTGCTCTTGGAGGATGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GGGGTGGACTTCTTCAAATATGGTGAAAGGGACACGAGGGCCAGCTaGCCTAGCCCGACCTGGAGGCTTAGGGGTACAAGGTGGCCCTTC +
Preference number: 6 (lower is better)
Translates to: GVDFFKYGERDTRAS*PSPTWRLRGTRWPF
Trigger: GAAGGGCCACCTTGTACCCCTAAGCCTCCAGGTCGGGCTAGGCAAGCTGGCCCTCGTGTCCCTTTCACCATATTTGAAGAAGTCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CAAGAGCACCAAGAAGCTCAAGGCATTCAGCCGAGTTaGGAACGCAGCTCGCCGCTCCAACAGTGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: QEHQEAQGIQPS*ERSSPLQQCLC
Trigger: GCAGAGGCACTGTTGGAGCGGCGAGCTGCGTTCTCAACTCGGCTGAATGCCTTGAGCTTCTTGGTGCTCTTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GCGGCAACTAAACGACAGGCGGTTGGAGAAGCAAAGTaGGGGACCTCACAGGGGACACTGCCATCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: AATKRQAVGEAK*GTSQGTLPSSK
Trigger: CTTGGAGGATGGCAGTGTCCCCTGTGAGGTCCCTCACTTTGCTTCTCCAACCGCCTGTCGTTTAGTTGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CGACGTTGCCGAGCCCAAGTGCTGACAGACTGGCTCTaGGATGACGCAGGCCTCCTCATAGAGCTTCTGACT +
Preference number: 6 (lower is better)
Translates to: RRCRAQVLTDWL*DDAGLLIELLT
Trigger: AGTCAGAAGCTCTATGAGGAGGCCTGCGTCATCTCAGAGCCAGTCTGTCAGCACTTGGGCTCGGCAACGTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GCACGCGTCACTTGTCTGGTCCAGGCTCCTCAGGCTTaGCTCCGCCTCTTCCAGATACAACTGCGCATAGCT +
Preference number: 6 (lower is better)
Translates to: ARVTCLVQAPQA*LRLFQIQLRIA
Trigger: AGCTATGCGCAGTTGTATCTGGAAGAGGCGGAGTCAAGCCTGAGGAGCCTGGACCAGACAAGTGACGCGTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GACTCGAGCAAGAAGAGAACCTGCTGCAAGTCTGACTaGCAGAGGTCAATGTCACCCCGGGCCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: DSSKKRTCCKSD*QRSMSPRASSS
Trigger: GCTGGAGCTGGCCCGGGGTGACATTGACCTCTGTCAGTCAGACTTGCAGCAGGTTCTCTTCTTGCTCGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp AGCTGTAGGCCAAGTTGCTGGTGTAAGAGGCAGTCATaGTCAGGTAGTCAGCCAGCTCTCCACCCGACAGGC +
Preference number: 6 (lower is better)
Translates to: SCRPSCWCKRQS*SGSQPALHPTG
Trigger: GCCTGTCGGGTGGAGAGCTGGCTGACTACCTGAGCATGACTGCCTCTTACACCAGCAACTTGGCCTACAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GAGTTCGGAAGTACAGCAGCTGAAGTGGGCCAGCTTTaGAAGGGCCTGAACCAAGAGCAGGTGGGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: EFGSTAAEVGQL*KGLNQEQVGSP
Trigger: TGGAGAGCCCACCTGCTCTTGGTTCAGGCCCTTGCAAAGCTGGCCCACTTCAGCTGCTGTACTTCCGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CCAAAATACTCCTCAGGTGCCCAGGGCAATCGAGCTTaGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATGG +
Preference number: 6 (lower is better)
Translates to: PKYSSGAQGNRA*QSTAGCKPSGW
Trigger: CCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTATTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CAA 72 bp CCAAGAGCACCAAGAAGCTCAAGGCATTCAGCCGAGTaGAGAACGCAGCTCGCCGCTCCAACAGTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: PRAPRSSRHSAE*RTQLAAPTVPL
Trigger: CAGAGGCACTGTTGGAGCGGCGAGCTGCGTTCTCAACTCGGCTGAATGCCTTGAGCTTCTTGGTGCTCTTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp CGCCTGTGGACCCTGGGAGCCAAGGGAACCTGGAGCTaGCTCTTGGTGGGGTGGACTTCTTCAAATATGGTG +
Preference number: 6 (lower is better)
Translates to: RLWTLGAKGTWS*LLVGWTSSNMV
Trigger: CACCATATTTGAAGAAGTCCACCCCACCAAGAGCAAGCTCCAGGTTCCCTTGGCTCCCAGGGTCCACAGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GGGTTGTCCTTTTCCAGGCGGGTCAGTAAAAGAGTGTaGCTCAAGGTTCCAGGCTGGAGGGTGGCCAGAGCC +
Preference number: 6 (lower is better)
Translates to: GLSFSRRVSKRV*LKVPGWRVARA
Trigger: GGCTCTGGCCACCCTCCAGCCTGGAACCTTGAGCAACACTCTTTTACTGACCCGCCTGGAAAAGGACAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp TCTGCCAGGTCCAAAATACTCCTCAGGTGCCCAGGGCAATCGAGCTaGGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATGGTATCGCAA +
Preference number: 6 (lower is better)
Translates to: SARSKILLRCPGQSS*AVNCWVQALRMVSQ
Trigger: TTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTATTTTGGACCTGGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CAA 90 bp CTCATGATCTCGGGTCCCTGGCTGGCCCAGACACAGAGGGGTGCTTaGGGACTCTCTTCTTCACAATTTCTTGAAGCCACCTTCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LMISGPWLAQTQRGA*GLSSSQFLEATFLA
Trigger: GGCCAGGAAGGTGGCTTCAAGAAATTGTGAAGAAGAGAGTCCCAAAGCACCCCTCTGTGTCTGGGCCAGCCAGGGACCCGAGATCATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GGTGCAGGAACTGAGAAGGGTGGGAGCCAAGGACTAGGGTCACTATaGGCCTCCGTGTCTGAGTACAAGACAGGTCTCTCTGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: GAGTEKGGSQGLGSL*ASVSEYKTGLSALL
Trigger: CAGCAAGGCAGAGAGACCTGTCTTGTACTCAGACACGGAGGCCAATAGTGACCCTAGTCCTTGGCTCCCACCCTTCTCAGTTCCTGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CTGGGCTTCCCTGAGTGGAACCATTGCGAAGTAGGATaGAGAGAATGCGTTCCAGGTAGAGGGGAGGGCGCT +
Preference number: 6 (lower is better)
Translates to: LGFPEWNHCEVG*RECVPGRGEGA
Trigger: AGCGCCCTCCCCTCTACCTGGAACGCATTCTCTTCATCCTACTTCGCAATGGTTCCACTCAGGGAAGCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
CDS TCA 72 bp GGCTGGGCAAGGCGCAGCACAGTGTCTGGGCTTCCCTaGGTGGAACCATTGCGAAGTAGGATGAAGAGAATG +
Preference number: 6 (lower is better)
Translates to: GWARRSTVSGLP*VEPLRSRMKRM
Trigger: CATTCTCTTCATCCTACTTCGCAATGGTTCCACTCAGGGAAGCCCAGACACTGTGCTGCGCCTTGCCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
CDS TCA 72 bp AACTGGAGGCTAGGAGCTACACTGGTCTTCTCTAGGTaGTTACGAGCCCTCTCCACTGCTCTGGCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: NWRLGATLVFSR*LRALSTALAAW
Trigger: CCAGGCTGCCAGAGCAGTGGAGAGGGCTCGTAATCACCTAGAGAAGACCAGTGTAGCTCCTAGCCTCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CACGCAGGGCACTTGAGAGGAGGTTGGACGAGAGACTaGGGTAAAAAGCCAGAACTTGCAGGGCCTGGACAC +
Preference number: 6 (lower is better)
Translates to: HAGHLRGGWTRD*GKKPELAGPGH
Trigger: GTGTCCAGGCCCTGCAAGTTCTGGCTTTTTACCTCAGTCTCTCGTCCAACCTCCTCTCAAGTGCCCTGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CCAGCCTTGATCCCAGAGCTGCTCACGCAGGGCACTTaGGAGGAGGTTGGACGAGAGACTGAGGTAAAAAGC +
Preference number: 6 (lower is better)
Translates to: PALIPELLTQGT*EEVGRETEVKS
Trigger: GCTTTTTACCTCAGTCTCTCGTCCAACCTCCTCTCAAGTGCCCTGCGTGAGCAGCTCTGGGATCAAGGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp CTCAGGTGCCCAGGGCAATCGAGCTTGGCAGTCAACTaGTGGGTGCAAGCCCTCAGGATGGTATCGCAAATT +
Preference number: 6 (lower is better)
Translates to: LRCPGQSSLAVN*WVQALRMVSQI
Trigger: AATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 72 bp AAGAACGGCTGCTGCCTTCCTCAGAAGCTGGGCCACTaGCCCTGGTCTTTCTTCTACAGCTTCCAACAGCTC +
Preference number: 6 (lower is better)
Translates to: KNGCCLPQKLGH*PWSFFYSFQQL
Trigger: GAGCTGTTGGAAGCTGTAGAAGAAAGACCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCCGTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp AGCTGGCAGGAAGAGCTGGCTGCCTTTGCGTGGTCCTaGAGTCTCTTAGATACAATCTGCAGGAGCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SWQEELAAFAWS*SLLDTICRSRR
Trigger: CCTCCTGCTCCTGCAGATTGTATCTAAGAGACTGCAGGACCACGCAAAGGCAGCCAGCTCTTCCTGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp AGCCTCTGCAGATGCTCTGCCAGTTCAGGTGATTCTTaGTGCTTCTGGGCCTTGCTGAGCTGTCGGTGCAAG +
Preference number: 6 (lower is better)
Translates to: SLCRCSASSGDS*CFWALLSCRCK
Trigger: CTTGCACCGACAGCTCAGCAAGGCCCAGAAGCAGCAAGAATCACCTGAACTGGCAGAGCATCTGCAGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CATCTGTTCGGCTGCTGGGGAAATCAGTCCGGGATCTaGACAGGAACTCCTTCAAGTCAGGCAGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: HLFGCWGNQSGI*TGTPSSQAAAA
Trigger: AGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTCCAGATCCCGGACTGATTTCCCCAGCAGCCGAACAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp ACCGCATCTGTCTTTAAGCTACGTCCCTTCCTAGTTTaGCCCCGGGTACGGGAAGCAGTCCCTCGCCTCTTA +
Preference number: 6 (lower is better)
Translates to: TASVFKLRPFLV*PRVREAVPRLL
Trigger: TAAGAGGCGAGGGACTGCTTCCCGTACCCGGGGCCAAACTAGGAAGGGACGTAGCTTAAAGACAGATGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CCGTGTCTGAGTACAAGACAGGTCTCTCTGCCTTGCTaGAGTCCCGTCTCAACACCTCACACTCTCCTACGG +
Preference number: 6 (lower is better)
Translates to: PCLSTRQVSLPC*SPVSTPHTLLR
Trigger: CCGTAGGAGAGTGTGAGGTGTTGAGACGGGACTCCAGCAAGGCAGAGAGACCTGTCTTGTACTCAGACACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp GGCCAAGAAGCGGCAGAGGTGAGCATAGAGCCCACTTaGAGGGCAGTGACTAACACCACGGAAAGCAATGCT +
Preference number: 6 (lower is better)
Translates to: GQEAAEVSIEPT*RAVTNTTESNA
Trigger: AGCATTGCTTTCCGTGGTGTTAGTCACTGCCCTCCAAGTGGGCTCTATGCTCACCTCTGCCGCTTCTTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp AGATGCTCTGCCAGTTCAGGTGATTCTTGCTGCTTCTaGGCCTTGCTGAGCTGTCGGTGCAAGTGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: RCSASSGDSCCF*ALLSCRCKWVS
Trigger: GCTCACCCACTTGCACCGACAGCTCAGCAAGGCCCAGAAGCAGCAAGAATCACCTGAACTGGCAGAGCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CGGGTCAGTAAAAGAGTGTTGCTCAAGGTTCCAGGCTaGAGGGTGGCCAGAGCCAACACACAGACAGTCACC +
Preference number: 6 (lower is better)
Translates to: RVSKRVLLKVPG*RVARANTQTVT
Trigger: GGTGACTGTCTGTGTGTTGGCTCTGGCCACCCTCCAGCCTGGAACCTTGAGCAACACTCTTTTACTGACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp TCCAAAATACTCCTCAGGTGCCCAGGGCAATCGAGCTaGGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATG +
Preference number: 6 (lower is better)
Translates to: SKILLRCPGQSS*AVNCWVQALRM
Trigger: CATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCTGAGGAGTATTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CAA 72 bp TCTTCAGGGCTCAGCTCGAGCAGATCACAGATGATGTaGAAGCGCTCCTGCCCAGTGTCAGCCCGTACTGAC +
Preference number: 6 (lower is better)
Translates to: SSGLSSSRSQMM*KRSCPVSARTD
Trigger: GTCAGTACGGGCTGACACTGGGCAGGAGCGCTTCAACATCATCTGTGATCTGCTCGAGCTGAGCCCTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GTTGGTCTGCTGGGTAAAGTTGTGGTAGCACAGCACTaGGGCCAGTTCCACCAGGTAGGTAGCTCGTGCCCA +
Preference number: 6 (lower is better)
Translates to: VGLLGKVVVAQH*GQFHQVGSSCP
Trigger: TGGGCACGAGCTACCTACCTGGTGGAACTGGCCCAAGTGCTGTGCTACCACAACTTTACCCAGCAGACCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp CTTCCCATGAGCAGAATGATGATGCTTCTGAGGAGCTaGTGGGCATCAATCAGCGCCGTCTCCGGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: LPMSRMMMLLRS*WASISAVSGVC
Trigger: GCAGACCCCGGAGACGGCGCTGATTGATGCCCACAAGCTCCTCAGAAGCATCATCATTCTGCTCATGGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp GAGGAGTTTACAGAGGACTGGATGGGACCAGGTTCGTaGAGCACAGTGTCCACCAGCTCAAGGGCAGGACCT +
Preference number: 6 (lower is better)
Translates to: EEFTEDWMGPGS*STVSTSSRAGP
Trigger: AGGTCCTGCCCTTGAGCTGGTGGACACTGTGCTCAACGAACCTGGTCCCATCCAGTCCTCTGTAAACTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GACAGGAACTCCTTCAAGTCAGGCAGCAGCTGCTGGGTCTCCTCCTaGCTGCAGAGCAGAGTGGCGAAGTTGACTCCTTTGAAGTTCCTC +
Preference number: 6 (lower is better)
Translates to: DRNSFKSGSSCWVSS*LQSRVAKLTPLKFL
Trigger: GAGGAACTTCAAAGGAGTCAACTTCGCCACTCTGCTCTGCAGCAAGGAGGAGACCCAGCAGCTGCTGCCTGACTTGAAGGAGTTCCTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS TCA 72 bp AGGAGTTTACAGAGGACTGGATGGGACCAGGTTCGTTaGGCACAGTGTCCACCAGCTCAAGGGCAGGACCTT +
Preference number: 6 (lower is better)
Translates to: RSLQRTGWDQVR*AQCPPAQGQDL
Trigger: AAGGTCCTGCCCTTGAGCTGGTGGACACTGTGCTCAACGAACCTGGTCCCATCCAGTCCTCTGTAAACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GAGCCAAGGACTAGGGTCACTATTGGCCTCCGTGTCTaGGTACAAGACAGGTCTCTCTGCCTTGCTGGAGTC +
Preference number: 6 (lower is better)
Translates to: EPRTRVTIGLRV*VQDRSLCLAGV
Trigger: GACTCCAGCAAGGCAGAGAGACCTGTCTTGTACTCAGACACGGAGGCCAATAGTGACCCTAGTCCTTGGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp GCCCAGGGCAATCGAGCTTGGCAGTCAACTGCTGGGTaGAAGCCCTCAGGATGGTATCGCAAATTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: AQGNRAWQSTAG*KPSGWYRKFVF
Trigger: GAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS GCA 72 bp CCTCTAAGGCCTCCAACATCCAGACAGCAGCAGATCTaGAACCGTCCACTAGCTGAGCAAGCTCAGTTGCCT +
Preference number: 6 (lower is better)
Translates to: PLRPPTSRQQQI*NRPLAEQAQLP
Trigger: AGGCAACTGAGCTTGCTCAGCTAGTGGACGGTTGCAGATCTGCTGCTGTCTGGATGTTGGAGGCCTTAGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp AACAAGGCCTGTGCTTTATCATCCAGAAGTCGATCCTaGTCCTGGGCCTCAGGACTCACGGACTCCAGAAGC +
Preference number: 6 (lower is better)
Translates to: NKACALSSRSRS*SWASGLTDSRS
Trigger: GCTTCTGGAGTCCGTGAGTCCTGAGGCCCAGGAGCAGGATCGACTTCTGGATGATAAAGCACAGGCCTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp TCTTCAAATATGGTGAAAGGGACACGAGGGCCAGCTTaGCTAGCCCGACCTGGAGGCTTAGGGGTACAAGGT +
Preference number: 6 (lower is better)
Translates to: SSNMVKGTRGPA*LARPGGLGVQG
Trigger: ACCTTGTACCCCTAAGCCTCCAGGTCGGGCTAGGCAAGCTGGCCCTCGTGTCCCTTTCACCATATTTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp CCTCCGTGTCTGAGTACAAGACAGGTCTCTCTGCCTTaGTGGAGTCCCGTCTCAACACCTCACACTCTCCTA +
Preference number: 6 (lower is better)
Translates to: PPCLSTRQVSLP*WSPVSTPHTLL
Trigger: TAGGAGAGTGTGAGGTGTTGAGACGGGACTCCAGCAAGGCAGAGAGACCTGTCTTGTACTCAGACACGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp AGGTGCCCAGGGCAATCGAGCTTGGCAGTCAACTGCTaGGTGCAAGCCCTCAGGATGGTATCGCAAATTTGT +
Preference number: 6 (lower is better)
Translates to: RCPGQSSLAVNC*VQALRMVSQIC
Trigger: ACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGCTCGATTGCCCTGGGCACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp GAAGAGAATGCGTTCCAGGTAGAGGGGAGGGCGCTGTaGAGTAGACAACAAATAGCCATCACAGGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: EENAFQVEGRAL*SRQQIAITGQL
Trigger: GAGCTGGCCTGTGATGGCTATTTGTTGTCTACTCCACAGCGCCCTCCCCTCTACCTGGAACGCATTCTCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
CDS CCA 72 bp CTGTTGATAAGAACGGCTGCTGCCTTCCTCAGAAGCTaGGCCACTGCCCCTGGTCTTTCTTCTACAGCTTCC +
Preference number: 6 (lower is better)
Translates to: LLIRTAAAFLRS*ATAPGLSSTAS
Trigger: GGAAGCTGTAGAAGAAAGACCAGGGGCAGTGGCCCAGCTTCTGAGGAAGGCAGCAGCCGTTCTTATCAACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TGGGTAAGCTGGCAGGAAGAGCTGGCTGCCTTTGCGTaGTCCTGCAGTCTCTTAGATACAATCTGCAGGAGC +
Preference number: 6 (lower is better)
Translates to: WVSWQEELAAFA*SCSLLDTICRS
Trigger: GCTCCTGCAGATTGTATCTAAGAGACTGCAGGACCACGCAAAGGCAGCCAGCTCTTCCTGCCAGCTTACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp GGAGCCAAGGGAACCTGGAGCTTGCTCTTGGTGGGGTaGACTTCTTCAAATATGGTGAAAGGGACACGAGGG +
Preference number: 6 (lower is better)
Translates to: GAKGTWSLLLVG*TSSNMVKGTRG
Trigger: CCCTCGTGTCCCTTTCACCATATTTGAAGAAGTCCACCCCACCAAGAGCAAGCTCCAGGTTCCCTTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp TTCTTCAAATATGGTGAAAGGGACACGAGGGCCAGCTaGCCTAGCCCGACCTGGAGGCTTAGGGGTACAAGG +
Preference number: 6 (lower is better)
Translates to: FFKYGERDTRAS*PSPTWRLRGTR
Trigger: CCTTGTACCCCTAAGCCTCCAGGTCGGGCTAGGCAAGCTGGCCCTCGTGTCCCTTTCACCATATTTGAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 90 bp GGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATGGTATCGCAAATTaGTCTTCTTTCGGCATCTGTTCGGCTGCTGGGGAAATCAGTCCG +
Preference number: 6 (lower is better)
Translates to: GSQLLGASPQDGIAN*SSFGICSAAGEISP
Trigger: CGGACTGATTTCCCCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp CCTGGAAGTGCATCTGAAGCAAGCACTGCTGCTGCTTaGAAGATGCTTCAGAGACTTCTCTCAGGTGCCGGA +
Preference number: 6 (lower is better)
Translates to: PGSASEASTAAA*KMLQRLLSGAG
Trigger: TCCGGCACCTGAGAGAAGTCTCTGAAGCATCTTCCAAGCAGCAGCAGTGCTTGCTTCAGATGCACTTCCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp CTGCTGGGTGCAAGCCCTCAGGATGGTATCGCAAATTaGTCTTCTTTCGGCATCTGTTCGGCTGCTGGGGAA +
Preference number: 6 (lower is better)
Translates to: LLGASPQDGIAN*SSFGICSAAGE
Trigger: TTCCCCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CAA 72 bp ACTGAGAAGGGTGGGAGCCAAGGACTAGGGTCACTATaGGCCTCCGTGTCTGAGTACAAGACAGGTCTCTCT +
Preference number: 6 (lower is better)
Translates to: TEKGGSQGLGSL*ASVSEYKTGLS
Trigger: AGAGAGACCTGTCTTGTACTCAGACACGGAGGCCAATAGTGACCCTAGTCCTTGGCTCCCACCCTTCTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GACGCCAGGACCTTCCCCAGGCTCTTTTCAGATGTCTaGTTCAGGAACTCCAATGCCAAGTGCGTGTACACT +
Preference number: 6 (lower is better)
Translates to: DARTFPRLFSDV*FRNSNAKCVYT
Trigger: AGTGTACACGCACTTGGCATTGGAGTTCCTGAATCAGACATCTGAAAAGAGCCTGGGGAAGGTCCTGGCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp TGCTGCTTGGAAGATGCTTCAGAGACTTCTCTCAGGTaGCGGACAAGGGAGCTGTATCCCCCAAGAAAAGCA +
Preference number: 6 (lower is better)
Translates to: CCLEDASETSLR*RTRELYPPRKA
Trigger: TGCTTTTCTTGGGGGATACAGCTCCCTTGTCCGGCACCTGAGAGAAGTCTCTGAAGCATCTTCCAAGCAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp ATTCTCACCGTAGTCCAGAAAGGGCGACTCGGTGGCTaGTTTCTGAATGGAGAGCACATCACTTCCCATGAG +
Preference number: 6 (lower is better)
Translates to: ILTVVQKGRLGG*FLNGEHITSHE
Trigger: CTCATGGGAAGTGATGTGCTCTCCATTCAGAAAGCAGCCACCGAGTCGCCCTTTCTGGACTACGGTGAGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CGCAAATTTGTCTTCTTTCGGCATCTGTTCGGCTGCTaGGGAAATCAGTCCGGGATCTGGACAGGAACTCCT +
Preference number: 6 (lower is better)
Translates to: RKFVFFRHLFGC*GNQSGIWTGTP
Trigger: AGGAGTTCCTGTCCAGATCCCGGACTGATTTCCCCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp AGAGCTGCCAGCCATAAGGTCACCATCTTGCAGCCCTaGGCCTGTTTACCCAGTTTCTTCAAACTCTCCACA +
Preference number: 6 (lower is better)
Translates to: RAASHKVTILQP*ACLPSFFKLST
Trigger: TGTGGAGAGTTTGAAGAAACTGGGTAAACAGGCCCAGGGCTGCAAGATGGTGACCTTATGGCTGGCAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TTCTGCGTGTGCACCTTCTTCACTGAGTCTGGATGCTaGGTCACAACACCAAACTCTGTGGAAGACTCGAGC +
Preference number: 6 (lower is better)
Translates to: FCVCTFFTESGC*VTTPNSVEDSS
Trigger: GCTCGAGTCTTCCACAGAGTTTGGTGTTGTGACCCAGCATCCAGACTCAGTGAAGAAGGTGCACACGCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp TGTAGCTCCTTGTCTCCTGCCCTGGATGCATCCATTTaGACTCGAACCCAGAAAGTGACTGGCTCGACCATG +
Preference number: 6 (lower is better)
Translates to: CSSLSPALDASI*TRTQKVTGSTM
Trigger: CATGGTCGAGCCAGTCACTTTCTGGGTTCGAGTCAAAATGGATGCATCCAGGGCAGGAGACAAGGAGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CCTGACAGCCTTGAGCAAAGTCATACACAATCCCGGTaGAGAGGTGGAAACCCTGGAAGTGCATCTGAAGCA +
Preference number: 6 (lower is better)
Translates to: PDSLEQSHTQSR*RGGNPGSASEA
Trigger: TGCTTCAGATGCACTTCCAGGGTTTCCACCTCTTCACCGGGATTGTGTATGACTTTGCTCAAGGCTGTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp GGAATCCAGGGTAGAAAGATCAATGGGTGCAGGAACTaGGAAGGGTGGGAGCCAAGGACTAGGGTCACTATT +
Preference number: 6 (lower is better)
Translates to: GIQGRKINGCRN*EGWEPRTRVTI
Trigger: AATAGTGACCCTAGTCCTTGGCTCCCACCCTTCTCAGTTCCTGCACCCATTGATCTTTCTACCCTGGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp GCTTGGCAGTCAACTGCTGGGTGCAAGCCCTCAGGATaGTATCGCAAATTTGTCTTCTTTCGGCATCTGTTC +
Preference number: 6 (lower is better)
Translates to: AWQSTAGCKPSG*YRKFVFFRHLF
Trigger: GAACAGATGCCGAAAGAAGACAAATTTGCGATACCATCCTGAGGGCTTGCACCCAGCAGTTGACTGCCAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp GGGCTCTCCGATCCCGCTCAATACCTTCCTGCATCTTaGCCTCTAAGGTACAGATGTAAAGCCATAACAAGG +
Preference number: 6 (lower is better)
Translates to: GLSDPAQYLPAS*PLRYRCKAITR
Trigger: CCTTGTTATGGCTTTACATCTGTACCTTAGAGGCCAAGATGCAGGAAGGTATTGAGCGGGATCGGAGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TCATTGACTTCAAATTCCTCCAAGTTACTAGGGGCCTaGGCTCTCCGATCCCGCTCAATACCTTCCTGCATC +
Preference number: 6 (lower is better)
Translates to: SLTSNSSKLLGA*ALRSRSIPSCI
Trigger: GATGCAGGAAGGTATTGAGCGGGATCGGAGAGCCCAGGCCCCTAGTAACTTGGAGGAATTTGAAGTCAATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp CTGAGTCTGGATGCTGGGTCACAACACCAAACTCTGTaGAAGACTCGAGCAAGAAGAGAACCTGCTGCAAGT +
Preference number: 6 (lower is better)
Translates to: LSLDAGSQHQTL*KTRARREPAAS
Trigger: ACTTGCAGCAGGTTCTCTTCTTGCTCGAGTCTTCCACAGAGTTTGGTGTTGTGACCCAGCATCCAGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CAA 72 bp CAGATCTGCAACCGTCCACTAGCTGAGCAAGCTCAGTaGCCTGACAGCCTTGAGCAAAGTCATACACAATCC +
Preference number: 6 (lower is better)
Translates to: QICNRPLAEQAQ*PDSLEQSHTQS
Trigger: GGATTGTGTATGACTTTGCTCAAGGCTGTCAGGCAACTGAGCTTGCTCAGCTAGTGGACGGTTGCAGATCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp TATCGCAAATTTGTCTTCTTTCGGCATCTGTTCGGCTaGTGGGGAAATCAGTCCGGGATCTGGACAGGAACT +
Preference number: 6 (lower is better)
Translates to: YRKFVFFRHLFG*WGNQSGIWTGT
Trigger: AGTTCCTGTCCAGATCCCGGACTGATTTCCCCAGCAGCCGAACAGATGCCGAAAGAAGACAAATTTGCGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
ENSMUST00000230212.2
ENSMUST00000231104.2
CDS CCA 72 bp GGATGCATCCATTTTGACTCGAACCCAGAAAGTGACTaGCTCGACCATGTGTTCCAGACTGTAGGGTTTCAG +
Preference number: 6 (lower is better)
Translates to: GCIHFDSNPESD*LDHVFQTVGFQ
Trigger: CTGAAACCCTACAGTCTGGAACACATGGTCGAGCCAGTCACTTTCTGGGTTCGAGTCAAAATGGATGCATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS CCA 72 bp TGGACACGTAGCAAGTACCAAGCCTTAGATGACTTCTaGAGGGCAGGATCCCGAAGCACAGAAAGCAACAAA +
Preference number: 6 (lower is better)
Translates to: WTRSKYQALDDF*RAGSRSTESNK
Trigger: TTTGTTGCTTTCTGTGCTTCGGGATCCTGCCCTCCAGAAGTCATCTAAGGCTTGGTACTTGCTACGTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp TTCAGTACAAGGAACAGGGCACACTGTCGAGGTATCTaGAGCTTAGTCGTAAGTTTTAGGGCCTCCAAGCAA +
Preference number: 6 (lower is better)
Translates to: FSTRNRAHCRGI*SLVVSFRASKQ
Trigger: TTGCTTGGAGGCCCTAAAACTTACGACTAAGCTGCAGATACCTCGACAGTGTGCCCTGTTCCTTGTACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp CCAGGCATTTGGACTGAGCTGCATCAGCAGCCAGATTaGAGGCAATGCTACTATACAGAAAACGATCTTCCT +
Preference number: 6 (lower is better)
Translates to: PGIWTELHQQPD*RQCYYTENDLP
Trigger: AGGAAGATCGTTTTCTGTATAGTAGCATTGCCTTCAATCTGGCTGCTGATGCAGCTCAGTCCAAATGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS GCA 72 bp CAGGCTCTTTTCAGATGTCTGATTCAGGAACTCCAATaGCAAGTGCGTGTACACTTGAGCCATGATCTCATC +
Preference number: 6 (lower is better)
Translates to: QALFRCLIQELQ*QVRVHLSHDLI
Trigger: GATGAGATCATGGCTCAAGTGTACACGCACTTGGCATTGGAGTTCCTGAATCAGACATCTGAAAAGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2
CDS TCA 72 bp AGGGCAGTGACTAACACCACGGAAAGCAATGCTCAATaGGTCAGAAATGGAATCCAGGGTAGAAAGATCAAT +
Preference number: 6 (lower is better)
Translates to: RAVTNTTESNAQ*VRNGIQGRKIN
Trigger: ATTGATCTTTCTACCCTGGATTCCATTTCTGACTCATTGAGCATTGCTTTCCGTGGTGTTAGTCACTGCCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000064924.6
ENSMUST00000229050.2