Pregenerated sensors for ESP6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092043Ensembl transcript IDs: ENSMUST00000097324.4, ENSMUST00000232937.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGGAACCCTGCCTTCTGTaGGCATGGATGGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IPPHPLHLLTNPTTPASLEPCLL*AWMAAA Trigger: TGCTGCTGCCATCCATGCCCACAGAAGGCAGGGTTC...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCGAACCCTGCCTTCTGTaGGCATGGATGGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SYSTPPPPFAHQPNHSCFEPCLL*AWMAAA Trigger: TGCTGCTGCCATCCATGCCCACAGAAGGCAGGGTTC...GAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR GCA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTCTGTGTCAGAACCCTaGCTTCTGTGGGCATGGATG | + |
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Preference number: 4 (lower is better) Translates to: IPPHPLHLLTNPTTPASLSVSEP*LLWAWM Trigger: CATCCATGCCCACAGAAGGCAGGGTTCTGACACAGA...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGACCAAGGATCCCTCTaGCCATTCATGCCCAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPDQGSL*PFMPSK Trigger: CTTGCTGGGCATGAATGGCCAGAGGGATCCTTGGTC...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR TCA 90 bp | TCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTATCTCAATGGCCTCTTTaGTGCTTGGGTTTCCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: STPPPPFAHQPNHSCFPVSQWPL*CLGFLG Trigger: ACCCAGGAAACCCAAGCATCAAAGAGGCCATTGAGA...TACAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR GCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTTCTGTGTCAGAACCCTaGCTTCTGTGGGCATGGATG | + |
|
Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPSVSEP*LLWAWM Trigger: CATCCATGCCCACAGAAGGCAGGGTTCTGACACAGA...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTATGCCTTCTGTGGGCATaGATGGCAGCAGCAGAATTA | + |
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Preference number: 4 (lower is better) Translates to: STPPPPFAHQPNHSCFPVCLLWA*MAAAEL Trigger: TAATTCTGCTGCTGCCATCCATGCCCACAGAAGGCA...TACAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR TCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTTCTCAATGGCCTCTTTaGTGCTTGGGTTTCCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPSQWPL*CLGFLG Trigger: ACCCAGGAAACCCAAGCATCAAAGAGGCCATTGAGA...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | ACCTCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCGGCCTCTTTGATGCTTaGGTTTCCTGGGTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TSYSTPPPPFAHQPNHSCGLFDA*VSWVSF Trigger: AAAGGAAACCCAGGAAACCCAAGCATCAAAGAGGCC...GCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR TCA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGATAGTGGATTGTTCTTaGGTCTGTGTCAGAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: IPPHPLHLLTNPTTPASLIVDCS*VCVRTL Trigger: CAGGGTTCTGACACAGACTCAAGAACAATCCACTAT...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTTTCTGTGGGCATGGATaGCAGCAGCAGAATTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPFCGHG*QQQNYK Trigger: CTTGTAATTCTGCTGCTGCCATCCATGCCCACAGAA...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCTTCTGTGGGCATGGATaGCAGCAGCAGAATTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SYSTPPPPFAHQPNHSCFFCGHG*QQQNYK Trigger: CTTGTAATTCTGCTGCTGCCATCCATGCCCACAGAA...GAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGGCCTCTTTGATGCTTaGGTTTCCTGGGTTTCCTTT | + |
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Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPGLFDA*VSWVSF Trigger: AAAGGAAACCCAGGAAACCCAAGCATCAAAGAGGCC...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR TCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTATAGTGGATTGTTCTTaGGTCTGTGTCAGAACCCTG | + |
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Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPIVDCS*VCVRTL Trigger: CAGGGTTCTGACACAGACTCAAGAACAATCCACTAT...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR TCA 90 bp | TCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTAAGCAATGTTTTGTCTTaGTCAAAGGCACAGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: STPPPPFAHQPNHSCFPVSNVLS*SKAQEN Trigger: GTTCTCCTGTGCCTTTGATCAAGACAAAACATTGCT...TACAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR TCA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTTGGTAAAGAAGTCATaGCTGAAACATGGAAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IPPHPLHLLTNPTTPASLLVKKS*LKHGSC Trigger: GCAACTTCCATGTTTCAGTCATGACTTCTTTACCAA...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGATGCTTGGGTTTCCTaGGTTTCCTTTGGATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPDAWVS*VSFGFN Trigger: ATTGAATCCAAAGGAAACCCAGGAAACCCAAGCATC...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTAAGGGTTGATCAGAATTaGACTGATCTTCAAGCAATG | + |
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Preference number: 4 (lower is better) Translates to: STPPPPFAHQPNHSCFPVRVDQN*TDLQAM Trigger: CATTGCTTGAAGATCAGTCCAATTCTGATCAACCCT...TACAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTCTTGGTTTGTTTTCTaGTCAGCAGATATAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: IPPHPLHLLTNPTTPASLSWFVF*SADIVD Trigger: ATCCACTATATCTGCTGACCAGAAAACAAACCAAGA...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | AACCTCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGTCCAAGAAAGTCTCTTaGTTTGTTTTCTGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLLFHPTPSICSPTQPLLSKKVS*FVFWSA Trigger: TGCTGACCAGAAAACAAACCAAGAGACTTTCTTGGA...CAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGAGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCTCCAAGAAAGTCTCTTaGTTTGTTTTCTGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SYSTPPPPFAHQPNHSCFSKKVS*FVFWSA Trigger: TGCTGACCAGAAAACAAACCAAGAGACTTTCTTGGA...GAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | TCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTATTCCTGGGTTTCCTTTaGATTCAATCTTATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: STPPPPFAHQPNHSCFPVFLGFL*IQSYPR Trigger: TCTTGGATAAGATTGAATCCAAAGGAAACCCAGGAA...TACAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGTTCCTGGGTTTCCTTTaGATTCAATCTTATCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: IPPHPLHLLTNPTTPASLFLGFL*IQSYPR Trigger: TCTTGGATAAGATTGAATCCAAAGGAAACCCAGGAA...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CCA 90 bp | AACCTCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGTCTTGGTTTGTTTTCTaGTCAGCAGATATAGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: NLLFHPTPSICSPTQPLLSWFVF*SADIVD Trigger: ATCCACTATATCTGCTGACCAGAAAACAAACCAAGA...CAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGAGGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CAA 90 bp | ACCTCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTATAGTGGATTGTTCTaGAGTCTGTGTCAGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: TSYSTPPPPFAHQPNHSCYSGLF*SLCQNP Trigger: AGGGTTCTGACACAGACTCAAGAACAATCCACTATA...GCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGAGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CAA 90 bp | TCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCTATAGTGGATTGTTCTaGAGTCTGTGTCAGAACCCT | + |
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Preference number: 5 (lower is better) Translates to: SYSTPPPPFAHQPNHSCFYSGLF*SLCQNP Trigger: AGGGTTCTGACACAGACTCAAGAACAATCCACTATA...GAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CAA 90 bp | ACCTCCTATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTTCCTGGGTTTCCTTaGGATTCAATCTTATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: TSYSTPPPPFAHQPNHSCFPGFP*DSILSK Trigger: CTTGGATAAGATTGAATCCAAAGGAAACCCAGGAAA...GCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATAGGAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CAA 90 bp | ATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTGAAGCAATGTTTTGTCTaGATCAAAGGCACAGGAGAA | + |
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Preference number: 5 (lower is better) Translates to: IPPHPLHLLTNPTTPASLKQCFV*IKGTGE Trigger: TTCTCCTGTGCCTTTGATCAAGACAAAACATTGCTT...CAGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS-3UTR CAA 90 bp | TATTCCACCCCACCCCCTCCATTTGCTCACCAACCCAACCACTCCTGCTTCCCTTTTCCTGGGTTTCCTTaGGATTCAATCTTATCCAAG | + |
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Preference number: 5 (lower is better) Translates to: YSTPPPPFAHQPNHSCFPFPGFP*DSILSK Trigger: CTTGGATAAGATTGAATCCAAAGGAAACCCAGGAAA...AGGGAAGCAGGAGTGGTTGGGTTGGTGAGCAAATGGAGGGGGTGGGGTGGAATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS TCA 90 bp | TTTTGTCTTGATCAAAGGCACAGGAGAACATCTCAATGGCCTCTTTaGTGCTTGGGTTTCCTGGGTTTCCTTTGGATTCAATCTTATCCA | + |
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Preference number: 5 (lower is better) Translates to: FCLDQRHRRTSQWPL*CLGFLGFLWIQSYP Trigger: TGGATAAGATTGAATCCAAAGGAAACCCAGGAAACCCAAGCATCAAAGAGGCCATTGAGATGTTCTCCTGTGCCTTTGATCAAGACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS GCA 72 bp | AGCAATCTCAGGACCAAGGATCCCTCTGGCCATTCATaGCCAGCAAGGCCATCCTCTGGTACGTATTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SNLRTKDPSGHS*PARPSSGTYSA Trigger: GGCTGAATACGTACCAGAGGATGGCCTTGCTGGGCATGAATGGCCAGAGGGATCCTTGGTCCTGAGATTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CCA 72 bp | TGGGTTATCGAGCAATCTCAGGACCAAGGATCCCTCTaGCCATTCATGCCCAGCAAGGCCATCCTCTGGTAC | + |
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Preference number: 6 (lower is better) Translates to: WVIEQSQDQGSL*PFMPSKAILWY Trigger: GTACCAGAGGATGGCCTTGCTGGGCATGAATGGCCAGAGGGATCCTTGGTCCTGAGATTGCTCGATAACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CCA 72 bp | TCCCTCTGGCCATTCATGCCCAGCAAGGCCATCCTCTaGTACGTATTCAGCCACTTTATATTTCTGAGCACC | + |
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Preference number: 6 (lower is better) Translates to: SLWPFMPSKAIL*YVFSHFIFLST Trigger: GGTGCTCAGAAATATAAAGTGGCTGAATACGTACCAGAGGATGGCCTTGCTGGGCATGAATGGCCAGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CCA 72 bp | AGTCTGTGTCAGAACCCTGCCTTCTGTGGGCATGGATaGCAGCAGCAGAATTACAAGAAATATCATCATTGG | + |
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Preference number: 6 (lower is better) Translates to: SLCQNPAFCGHG*QQQNYKKYHHW Trigger: CCAATGATGATATTTCTTGTAATTCTGCTGCTGCCATCCATGCCCACAGAAGGCAGGGTTCTGACACAGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 90 bp | CAAGAAAGTCTCTTGGTTTGTTTTCTGGTCAGCAGATATAGTGGATaGTTCTTGAGTCTGTGTCAGAACCCTGCCTTCTGTGGGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: QESLLVCFLVSRYSG*FLSLCQNPAFCGHG Trigger: TCCATGCCCACAGAAGGCAGGGTTCTGACACAGACTCAAGAACAATCCACTATATCTGCTGACCAGAAAACAAACCAAGAGACTTTCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS TCA 72 bp | TTTGTTTTCTGGTCAGCAGATATAGTGGATTGTTCTTaGGTCTGTGTCAGAACCCTGCCTTCTGTGGGCATG | + |
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Preference number: 6 (lower is better) Translates to: FVFWSADIVDCS*VCVRTLPSVGM Trigger: CATGCCCACAGAAGGCAGGGTTCTGACACAGACTCAAGAACAATCCACTATATCTGCTGACCAGAAAACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS TCA 72 bp | GATCAAAGGCACAGGAGAACATCTCAATGGCCTCTTTaGTGCTTGGGTTTCCTGGGTTTCCTTTGGATTCAA | + |
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Preference number: 6 (lower is better) Translates to: DQRHRRTSQWPL*CLGFLGFLWIQ Trigger: TTGAATCCAAAGGAAACCCAGGAAACCCAAGCATCAAAGAGGCCATTGAGATGTTCTCCTGTGCCTTTGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CCA 72 bp | ATTGTTCTTGAGTCTGTGTCAGAACCCTGCCTTCTGTaGGCATGGATGGCAGCAGCAGAATTACAAGAAATA | + |
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Preference number: 6 (lower is better) Translates to: IVLESVSEPCLL*AWMAAAELQEI Trigger: TATTTCTTGTAATTCTGCTGCTGCCATCCATGCCCACAGAAGGCAGGGTTCTGACACAGACTCAAGAACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 72 bp | GTTTGTTTTCTGGTCAGCAGATATAGTGGATTGTTCTaGAGTCTGTGTCAGAACCCTGCCTTCTGTGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: VCFLVSRYSGLF*SLCQNPAFCGH Trigger: ATGCCCACAGAAGGCAGGGTTCTGACACAGACTCAAGAACAATCCACTATATCTGCTGACCAGAAAACAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 72 bp | CTCTTGGTTTGTTTTCTGGTCAGCAGATATAGTGGATaGTTCTTGAGTCTGTGTCAGAACCCTGCCTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: LLVCFLVSRYSG*FLSLCQNPAFC Trigger: ACAGAAGGCAGGGTTCTGACACAGACTCAAGAACAATCCACTATATCTGCTGACCAGAAAACAAACCAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 90 bp | GGAGGGTTGATCAGAATTGGACTGATCTTCAAGCAATGTTTTGTCTaGATCAAAGGCACAGGAGAACATCTCAATGGCCTCTTTGATGCT | + |
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Preference number: 6 (lower is better) Translates to: GGLIRIGLIFKQCFV*IKGTGEHLNGLFDA Trigger: AGCATCAAAGAGGCCATTGAGATGTTCTCCTGTGCCTTTGATCAAGACAAAACATTGCTTGAAGATCAGTCCAATTCTGATCAACCCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 72 bp | ATGGCCTCTTTGATGCTTGGGTTTCCTGGGTTTCCTTaGGATTCAATCTTATCCAAGAAAGTCTCTTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: MASLMLGFPGFP*DSILSKKVSWF Trigger: AAACCAAGAGACTTTCTTGGATAAGATTGAATCCAAAGGAAACCCAGGAAACCCAAGCATCAAAGAGGCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 72 bp | ATCAGAATTGGACTGATCTTCAAGCAATGTTTTGTCTaGATCAAAGGCACAGGAGAACATCTCAATGGCCTC | + |
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Preference number: 6 (lower is better) Translates to: IRIGLIFKQCFV*IKGTGEHLNGL Trigger: GAGGCCATTGAGATGTTCTCCTGTGCCTTTGATCAAGACAAAACATTGCTTGAAGATCAGTCCAATTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS TCA 72 bp | CCATCCTCTGGTACGTATTCAGCCACTTTATATTTCTaGGCACCACATTTGTTCAGGGTGGTCATTAATTTA | + |
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Preference number: 6 (lower is better) Translates to: PSSGTYSATLYF*APHLFRVVINL Trigger: TAAATTAATGACCACCCTGAACAAATGTGGTGCTCAGAAATATAAAGTGGCTGAATACGTACCAGAGGATGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 90 bp | GTTTCCTGGGTTTCCTTTGGATTCAATCTTATCCAAGAAAGTCTCTaGGTTTGTTTTCTGGTCAGCAGATATAGTGGATTGTTCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: VSWVSFGFNLIQESL*VCFLVSRYSGLFLS Trigger: ACTCAAGAACAATCCACTATATCTGCTGACCAGAAAACAAACCAAGAGACTTTCTTGGATAAGATTGAATCCAAAGGAAACCCAGGAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CAA 72 bp | GTTTCCTTTGGATTCAATCTTATCCAAGAAAGTCTCTaGGTTTGTTTTCTGGTCAGCAGATATAGTGGATTG | + |
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Preference number: 6 (lower is better) Translates to: VSFGFNLIQESL*VCFLVSRYSGL Trigger: CAATCCACTATATCTGCTGACCAGAAAACAAACCAAGAGACTTTCTTGGATAAGATTGAATCCAAAGGAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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| CDS CCA 72 bp | TTTCCTTTGGATTCAATCTTATCCAAGAAAGTCTCTTaGTTTGTTTTCTGGTCAGCAGATATAGTGGATTGT | + |
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Preference number: 6 (lower is better) Translates to: FPLDSILSKKVS*FVFWSADIVDC Trigger: ACAATCCACTATATCTGCTGACCAGAAAACAAACCAAGAGACTTTCTTGGATAAGATTGAATCCAAAGGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097324.4 ENSMUST00000232937.2 |
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