Pregenerated sensors for ESP5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000117190

Ensembl transcript IDs: ENSMUST00000233672.2

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 72 bp	GCACAGAATACTTTCTCTGGGGCCTGTTTATTTCCTTaGTCTTGGCGGTCAGTCTTGTCCAAGACAGCCTTG	+
Preference number: 6 (lower is better) Translates to: AQNTFSGACLFP*SWRSVLSKTAL Trigger: CAAGGCTGTCTTGGACAAGACTGACCGCCAAGACAAAGGAAATAAACAGGCCCCAGAGAAAGTATTCTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 72 bp	CAAACCCACGATGACTTTGCGTTTAGAACTGTCTTCTaGGTGCCTCACTCTGGTCCTTTGAAGTCTACTGGC	+
Preference number: 6 (lower is better) Translates to: QTHDDFAFRTVF*VPHSGPLKSTG Trigger: GCCAGTAGACTTCAAAGGACCAGAGTGAGGCACCAAGAAGACAGTTCTAAACGCAAAGTCATCGTGGGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 90 bp	GACTTTGCGTTTAGAACTGTCTTCTTGGTGCCTCACTCTGGTCCTTaGAAGTCTACTGGCCATATGATTCAAGTTTACTGGGTCCACTTG	+
Preference number: 6 (lower is better) Translates to: DFAFRTVFLVPHSGP*KSTGHMIQVYWVHL Trigger: CAAGTGGACCCAGTAAACTTGAATCATATGGCCAGTAGACTTCAAAGGACCAGAGTGAGGCACCAAGAAGACAGTTCTAAACGCAAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 72 bp	GAATACTTTCTCTGGGGCCTGTTTATTTCCTTTGTCTaGGCGGTCAGTCTTGTCCAAGACAGCCTTGTGATT	+
Preference number: 6 (lower is better) Translates to: EYFLWGLFISFV*AVSLVQDSLVI Trigger: AATCACAAGGCTGTCTTGGACAAGACTGACCGCCAAGACAAAGGAAATAAACAGGCCCCAGAGAAAGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 72 bp	TCTACTGGCCATATGATTCAAGTTTACTGGGTCCACTaGATGCTTCTGAGTACAACAGTTGCTCTGGGATAT	+
Preference number: 6 (lower is better) Translates to: STGHMIQVYWVH*MLLSTTVALGY Trigger: ATATCCCAGAGCAACTGTTGTACTCAGAAGCATCAAGTGGACCCAGTAAACTTGAATCATATGGCCAGTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 72 bp	TTTAGAACTGTCTTCTTGGTGCCTCACTCTGGTCCTTaGAAGTCTACTGGCCATATGATTCAAGTTTACTGG	+
Preference number: 6 (lower is better) Translates to: FRTVFLVPHSGP*KSTGHMIQVYW Trigger: CCAGTAAACTTGAATCATATGGCCAGTAGACTTCAAAGGACCAGAGTGAGGCACCAAGAAGACAGTTCTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 72 bp	ACTAAATCCAAGAATTCATCCAAACCCACGATGACTTaGCGTTTAGAACTGTCTTCTTGGTGCCTCACTCTG	+
Preference number: 6 (lower is better) Translates to: TKSKNSSKPTMT*RLELSSWCLTL Trigger: CAGAGTGAGGCACCAAGAAGACAGTTCTAAACGCAAAGTCATCGTGGGTTTGGATGAATTCTTGGATTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233672.2
CDS CAA 72 bp	ATTTTTCTTATGATTAGAAGATTTGGTGGATTCATTTaGAGTCTGTGTCAGTACCCTTCCATCAGTGTGCAT	+
Preference number: 6 (lower is better) Translates to: IFLMIRRFGGFI*SLCQYPSISVH Trigger: ATGCACACTGATGGAAGGGTACTGACACAGACTCAAAATGAATCCACCAAATCTTCTAATCATAAGAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233672.2

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