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Pregenerated sensors for ESP3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000093957

Ensembl transcript IDs: ENSMUST00000177574.2

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTTGTTTCTaGGCACCACATTTGCTCAGTGCAGCCAAGAATTTAGTGAGATTT +
Preference number: 1 (lower is better)
Translates to: LWDIILKFSLSTCCF*APHLLSAAKNLVRF
Trigger: AAATCTCACTAAATTCTTGGCTGCACTGAGCAAATGTGGTGCTCAGAAACAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR-3UTR CCA 90 bp CTATTAGTTCTGAAGAGATGTGAATTCCCAGCTGCCTGGTCAGACCTCTTTTTGTGTTTTGGTTACCATTaGCCAGGTCTTCAAACAAAG +
Preference number: 2 (lower is better)
Translates to: LLVLKRCEFPAAWSDLFLCFGYH*PGLQTK
Trigger: CTTTGTTTGAAGACCTGGCCAATGGTAACCAAAACA...CAAAAAGAGGTCTGACCAGGCAGCTGGGAATTCACATCTCTTCAGAACTAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR CAA 90 bp CTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTaGTTGTTTCTGAGCACCACATTTGCTCAGTGCAGCCAAGAATTT +
Preference number: 2 (lower is better)
Translates to: LLRPMGHNSEIFSIH*LFLSTTFAQCSQEF
Trigger: AAATTCTTGGCTGCACTGAGCAAATGTGGTGCTCAGAAACAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR-3UTR GCA 90 bp TGTCTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTTGTCTGAGCACCACATTTaGTCAGTGCAGCCAAGAATT +
Preference number: 2 (lower is better)
Translates to: CLLRPMGHNSEIFSIHLLSEHHI*SVQPRI
Trigger: AATTCTTGGCTGCACTGAGCAAATGTGGTGCTCAGA...CAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR-3UTR CCA 90 bp CTATTAGTTCTGAAGAGATGTGAATTCCCAGCTGCCTGGTCAGACCTCTTTTTGTTACGGAGTAGACACTaGTGTTTTGTGTTTATTGAC +
Preference number: 2 (lower is better)
Translates to: LLVLKRCEFPAAWSDLFLLRSRH*CFVFID
Trigger: GTCAATAAACACAAAACACCAGTGTCTACTCCGTAA...CAAAAAGAGGTCTGACCAGGCAGCTGGGAATTCACATCTCTTCAGAACTAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR-3UTR CCA 90 bp AATAATTGGAAGCATAAAACATTTCCCTTCAGAATTGCTCAGACTACAGCATGGGGTCAGACCTCTTTTTaGCTCTCTCTGGCTCCTTTA +
Preference number: 2 (lower is better)
Translates to: NNWKHKTFPFRIAQTTAWGQTSF*LSLAPL
Trigger: TAAAGGAGCCAGAGAGAGCCAAAAAGAGGTCTGACC...CCATGCTGTAGTCTGAGCAATTCTGAAGGGAAATGTTTTATGCTTCCAATTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR GCA 72 bp GTAAAAGGCACAGCAGTTCTGACACTAGGAGCCTTCTaGTTAACCTTATTTGGGAGACAGCAAATTTGTTAC +
Preference number: 3 (lower is better)
Translates to: VKGTAVLTLGAF*LTLFGRQQICY
Trigger: GTAACAAATTTGCTGTCTCCCAAATAAGGTTAAGCAGAAGGCTCCTAGTGTCAGAACTGCTGTGCCTTTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR-3UTR CAA 90 bp TCTTGTCTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTTGTTTTGGTTACCATaGGCCAGGTCTTCAAACAAA +
Preference number: 3 (lower is better)
Translates to: SCLLRPMGHNSEIFSIHLLFWLP*ARSSNK
Trigger: TTTGTTTGAAGACCTGGCCAATGGTAACCAAAACAA...CAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAGACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR TCA 72 bp ATAATTCTGAAATTTTCTCTATCCACTTGTTGTTTCTaGGCACCACATTTGCTCAGTGCAGCCAAGAATTTA +
Preference number: 3 (lower is better)
Translates to: IILKFSLSTCCF*APHLLSAAKNL
Trigger: TAAATTCTTGGCTGCACTGAGCAAATGTGGTGCTCAGAAACAACAAGTGGATAGAGAAAATTTCAGAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR CAA 72 bp CTTCAGAATTGCTCAGACTACAGCATGGAAGAGTTATaGGCTCACGATGAATTTACCCTGAATCTTGCCACA +
Preference number: 4 (lower is better)
Translates to: LQNCSDYSMEEL*AHDEFTLNLAT
Trigger: TGTGGCAAGATTCAGGGTAAATTCATCGTGAGCCAATAACTCTTCCATGCTGTAGTCTGAGCAATTCTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR CAA 72 bp CCTATGGGACATAATTCTGAAATTTTCTCTATCCACTaGTTGTTTCTGAGCACCACATTTGCTCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PMGHNSEIFSIH*LFLSTTFAQCS
Trigger: GCTGCACTGAGCAAATGTGGTGCTCAGAAACAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CCA 90 bp TCTTGTCTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGATGTTTGGTTCTCTTTaGGAGACAAGTGTGACAGCC +
Preference number: 4 (lower is better)
Translates to: SCLLRPMGHNSEIFSIHLMFGSL*ETSVTA
Trigger: GGCTGTCACACTTGTCTCCCAAAGAGAACCAAACAT...CAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAGACAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR TCA 90 bp TCTTGTCTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTGGAACTTGCTTTCTTaGTCCATAGTCTTAGCAGGA +
Preference number: 4 (lower is better)
Translates to: SCLLRPMGHNSEIFSIHLWNLLS*SIVLAG
Trigger: TCCTGCTAAGACTATGGATCAAGAAAGCAAGTTCCA...CAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAGACAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR TCA 90 bp TTAGCCAAGACTTGTTTTGGTTACCATTGGCCAGGTCTTCAAACAAAGTTTGTTCTCTCAAAGTCCTCTTaGATGTTTGGTTCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: LAKTCFGYHWPGLQTKFVLSKSS*MFGSLW
Trigger: CCAAAGAGAACCAAACATTCAAGAGGACTTTGAGAG...AACAAACTTTGTTTGAAGACCTGGCCAATGGTAACCAAAACAAGTCTTGGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CCA 90 bp TTAGCCAAGACTTGTTTTGGTTACCATTGGCCAGGTCTTCAAACAAAGTTTGTTGATCAGCAGATATGGTaGGTTCTTTTTGAGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LAKTCFGYHWPGLQTKFVDQQIW*VLFESV
Trigger: CACAGACTCAAAAAGAACCCACCATATCTGCTGATC...AACAAACTTTGTTTGAAGACCTGGCCAATGGTAACCAAAACAAGTCTTGGCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CCA 90 bp TGTCTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTTGGTCCTCTTGAATGTTTaGTTCTCTTTGGGAGACAAG +
Preference number: 4 (lower is better)
Translates to: CLLRPMGHNSEIFSIHLLVLLNV*FSLGDK
Trigger: CTTGTCTCCCAAAGAGAACCAAACATTCAAGAGGAC...CAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR CAA 72 bp AGTGCAGCCAAGAATTTAGTGAGATTTAGCCAAGACTaGTTTTGGTTACCATTGGCCAGGTCTTCAAACAAA +
Preference number: 4 (lower is better)
Translates to: SAAKNLVRFSQD*FWLPLARSSNK
Trigger: TTTGTTTGAAGACCTGGCCAATGGTAACCAAAACAAGTCTTGGCTAAATCTCACTAAATTCTTGGCTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CCA 90 bp ATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTTGTTTCTGAGCACCACAGGTGATCAGCAGATATaGTGGGTTCTTTTTGAGTCT +
Preference number: 4 (lower is better)
Translates to: MGHNSEIFSIHLLFLSTTGDQQI*WVLFES
Trigger: AGACTCAAAAAGAACCCACCATATCTGCTGATCACC...TGTGGTGCTCAGAAACAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
3UTR CAA 72 bp GAAATAATTGCCTTGTTGGTGCTTAACTCTTGTCTCTaGAGGCCTATGGGACATAATTCTGAAATTTTCTCT +
Preference number: 4 (lower is better)
Translates to: EIIALLVLNSCL*RPMGHNSEIFS
Trigger: AGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAGACAAGAGTTAAGCACCAACAAGGCAATTATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS CCA 90 bp TTAATCGATGGCACAGAGCATCCTCTCAAAGTCCTCTTGAATGTTTaGTTCTCTTTGGGAGACAAGTGTGACAGCCTTGGGATTTTTCTG +
Preference number: 5 (lower is better)
Translates to: LIDGTEHPLKVLLNV*FSLGDKCDSLGIFL
Trigger: CAGAAAAATCCCAAGGCTGTCACACTTGTCTCCCAAAGAGAACCAAACATTCAAGAGGACTTTGAGAGGATGCTCTGTGCCATCGATTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CAA 90 bp CTATTAGTTCTGAAGAGATGTGAATTCCCAGCTGCCTGGTCAGACCTCTTTTTGAATGTTTGGTTCTCTTaGGGAGACAAGTGTGACAGC +
Preference number: 5 (lower is better)
Translates to: LLVLKRCEFPAAWSDLFLNVWFS*GDKCDS
Trigger: GCTGTCACACTTGTCTCCCAAAGAGAACCAAACATT...CAAAAAGAGGTCTGACCAGGCAGCTGGGAATTCACATCTCTTCAGAACTAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CAA 90 bp GCCAAGAATTTAGTGAGATTTAGCCAAGACTTGTTTTGGTTACCATTGGCCAGGTATGGTGGGTTCTTTTaGAGTCTGTGTCAGAATCCT +
Preference number: 5 (lower is better)
Translates to: AKNLVRFSQDLFWLPLARYGGFF*SLCQNP
Trigger: AGGATTCTGACACAGACTCAAAAAGAACCCACCATA...CCTGGCCAATGGTAACCAAAACAAGTCTTGGCTAAATCTCACTAAATTCTTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CAA 90 bp CTCTTGAGGCCTATGGGACATAATTCTGAAATTTTCTCTATCCACTTGTTGTTTCCTCTCAAAGTCCTCTaGAATGTTTGGTTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: LLRPMGHNSEIFSIHLLFPLKVL*NVWFSL
Trigger: CAAAGAGAACCAAACATTCAAGAGGACTTTGAGAGG...AAACAACAAGTGGATAGAGAAAATTTCAGAATTATGTCCCATAGGCCTCAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS-3UTR CAA 90 bp AGCCTTCTGCTTAACCTTATTTGGGAGACAGCAAATTTGTTACTAAGTTTAAGTAGTCCTCTTGAATGTTaGGTTCTCTTTGGGAGACAA +
Preference number: 5 (lower is better)
Translates to: SLLLNLIWETANLLLSLSSPLEC*VLFGRQ
Trigger: TTGTCTCCCAAAGAGAACCAAACATTCAAGAGGACT...ACTTAAACTTAGTAACAAATTTGCTGTCTCCCAAATAAGGTTAAGCAGAAGGCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2
CDS CAA 90 bp GGCACAGAGCATCCTCTCAAAGTCCTCTTGAATGTTTGGTTCTCTTaGGGAGACAAGTGTGACAGCCTTGGGATTTTTCTGGTGATCAGC +
Preference number: 6 (lower is better)
Translates to: GTEHPLKVLLNVWFS*GDKCDSLGIFLVIS
Trigger: GCTGATCACCAGAAAAATCCCAAGGCTGTCACACTTGTCTCCCAAAGAGAACCAAACATTCAAGAGGACTTTGAGAGGATGCTCTGTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177574.2