Pregenerated sensors for ESP22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000117311Ensembl transcript IDs: ENSMUST00000233133.2
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS CCA 90 bp | CTGAGCAAGTCATCAGGTAGTATTTCTTTGGAGACTTTAGAGATATaGATAACAGATTCCGGGACATCTCTTAAACGTCGACAAACTAAC | + |
Preference number: 5 (lower is better) Translates to: LSKSSGSISLETLEI*ITDSGTSLKRRQTN Trigger: GTTAGTTTGTCGACGTTTAAGAGATGTCCCGGAATCTGTTATCCATATCTCTAAAGTCTCCAAAGAAATACTACCTGATGACTTGCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233133.2 |
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CDS CAA 72 bp | GTCAAAAGGCGTTTTATGGTGTTAAACACTATTCCCTaGGATTGGACAAGTTTATCTTTATCAAAGCAAACC | + |
Preference number: 6 (lower is better) Translates to: VKRRFMVLNTIP*DWTSLSLSKQT Trigger: GGTTTGCTTTGATAAAGATAAACTTGTCCAATCCAAGGGAATAGTGTTTAACACCATAAAACGCCTTTTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233133.2 |