Pregenerated sensors for ESD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021996Ensembl transcript IDs: ENSMUST00000022573.17, ENSMUST00000175712.8, ENSMUST00000175887.8, ENSMUST00000176726.2, ENSMUST00000176957.8, ENSMUST00000177137.8, ENSMUST00000177181.8, ENSMUST00000177283.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTGCCTGACTCTCCTGTGCCCGTTTCCCTATCCTCTTAATGACTaGCCATCATTGCCTTCTAGAAATCAGATCCTCGACAGACAGGAG | + |
|
Preference number: 1 (lower is better) Translates to: VCLTLLCPFPYPLND*PSLPSRNQILDRQE Trigger: CTCCTGTCTGTCGAGGATCTGATTTCTAGAAGGCAATGATGGCCAGTCATTAAGAGGATAGGGAAACGGGCACAGGAGAGTCAGGCACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR GCA 90 bp | CTCTCCTGTGCCCGTTTCCCTATCCTCTTAATGACTGGCCATCATTaGCTTCTAGAAATCAGATCCTCGACAGACAGGAGAGAAAGGTAC | + |
|
Preference number: 1 (lower is better) Translates to: LSCARFPILLMTGHH*LLEIRSSTDRRERY Trigger: GTACCTTTCTCTCCTGTCTGTCGAGGATCTGATTTCTAGAAGGCAATGATGGCCAGTCATTAAGAGGATAGGGAAACGGGCACAGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR TCA 90 bp | AAGTTTGATATATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATaGTCTTCTGCGAGGAAGTCAGCACTCCTGTTGATTCCCTTCCGG | + |
|
Preference number: 1 (lower is better) Translates to: KFDIFIQKSDSAAGA*SSARKSALLLIPFR Trigger: CCGGAAGGGAATCAACAGGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATATATCAAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAAAGGTACGCAGTAAGAAGAGCTAGTGGCCTAACGTCTGATGGGATGAAAAGGAGCATGATCTTCTaGGAGGAAGTCAGCACTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RERYAVRRASGLTSDGMKRSMIF*EEVSTP Trigger: AGGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCT...TTTCATCCCATCAGACGTTAGGCCACTAGCTCTTCTTACTGCGTACCTTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR-3UTR GCA 90 bp | TTATCTATTGATCTTTTCGGGGAGCAGTGTGGGTATTTACAGAGACCAGTGACTATGACTGGCCATCATTaGCTTCTAGAAATCAGATCC | + |
|
Preference number: 2 (lower is better) Translates to: LSIDLFGEQCGYLQRPVTMTGHH*LLEIRS Trigger: GGATCTGATTTCTAGAAGGCAATGATGGCCAGTCAT...AGTCACTGGTCTCTGTAAATACCCACACTGCTCCCCGAAAAGATCAATAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR GCA 72 bp | GGAAGTCTGCCACAGACAGTGTGCCTGACTCTCCTGTaGCCGTTTCCCTATCCTCTTAATGACTGGCCATCA | + |
|
Preference number: 3 (lower is better) Translates to: GSLPQTVCLTLL*PFPYPLNDWPS Trigger: TGATGGCCAGTCATTAAGAGGATAGGGAAACGGGCACAGGAGAGTCAGGCACACTGTCTGTGGCAGACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR TCA 72 bp | GAGCATGATCTTCTGCGAGGAAGTCAGCACTCCTGTTaGTTCCCTTCCGGCCTCCTGATGAGATTCTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: EHDLLRGSQHSC*FPSGLLMRFSW Trigger: CCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGACTTCCTCGCAGAAGATCATGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| 3UTR TCA 72 bp | ACTAGCACTGAGGAAGTCTGCCACAGACAGTGTGCCTaGCTCTCCTGTGCCCGTTTCCCTATCCTCTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: TSTEEVCHRQCA*LSCARFPILLM Trigger: CATTAAGAGGATAGGGAAACGGGCACAGGAGAGTCAGGCACACTGTCTGTGGCAGACTTCCTCAGTGCTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR GCA 72 bp | GCCCGTTTCCCTATCCTCTTAATGACTGGCCATCATTaGCTTCTAGAAATCAGATCCTCGACAGACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ARFPILLMTGHH*LLEIRSSTDRR Trigger: TCTCCTGTCTGTCGAGGATCTGATTTCTAGAAGGCAATGATGGCCAGTCATTAAGAGGATAGGGAAACGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR CCA 72 bp | ACTCTCCTGTGCCCGTTTCCCTATCCTCTTAATGACTaGCCATCATTGCCTTCTAGAAATCAGATCCTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: TLLCPFPYPLND*PSLPSRNQILD Trigger: GTCGAGGATCTGATTTCTAGAAGGCAATGATGGCCAGTCATTAAGAGGATAGGGAAACGGGCACAGGAGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR TCA 72 bp | ACCCACTTGTCTATTACCAGCCCCGACTTCCCTCAGTaGCTGACAAATAAACCTTTTCCTCCTTATGTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: THLSITSPDFPQ*LTNKPFPPYVA Trigger: AGCAACATAAGGAGGAAAAGGTTTATTTGTCAGTCACTGAGGGAAGTCGGGGCTGGTAATAGACAAGTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| 3UTR TCA 72 bp | ATATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATaGTCTTCTGCGAGGAAGTCAGCACTCCTGTTGATT | + |
|
Preference number: 3 (lower is better) Translates to: IFIQKSDSAAGA*SSARKSALLLI Trigger: AATCAACAGGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTGTGGAAGCTCCTCGGTaGCGTAAGAGTACATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLIPFRPPDEILLAEAVEAPR*RKSTFC Trigger: ACAGAATGTACTCTTACGTCACCGAGGAGCTTCCAC...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTTGGCCTCCCATGGAGTaGCCAAAAATAGACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLIPFRPPDEILLAEAWPPME*PKIDIL Trigger: GAGGATGTCTATTTTTGGTCACTCCATGGGAGGCCA...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTCTGTGCAGGCAGCTATaGAGTTATCAGGGAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLIPFRPPDEILLAEALCRQL*SYQGVT Trigger: AGTTACTCCCTGATAACTTCATAGCTGCCTGCACAG...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CCA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTAATAGACATCCTCTGTaGGTCCACTGGGAAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLIPFRPPDEILLAEANRHPL*VHWEIG Trigger: GCCAATTTCCCAGTGGACCCACAGAGGATGTCTATT...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGGAAATTGGCATTTATaGGTTGTGGAAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SALLLIPFRPPDEILLAEGNWHL*VVEAPR Trigger: CCGAGGAGCTTCCACAACTCATAAATGCCAATTTCC...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTTGGCCTCCCATGGAGTaGCCAAAAATAGACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSALLLIPFRPPDEILLAWPPME*PKIDIL Trigger: GAGGATGTCTATTTTTGGTCACTCCATGGGAGGCCA...AGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | GAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCACTCCTCTGTGCAGGCAGCTATaGAGTTATCAGGGAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: EKRFSCRSMIFCEEVSTPLCRQL*SYQGVT Trigger: AGTTACTCCCTGATAACTTCATAGCTGCCTGCACAG...AGGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTACAGGTCGCATCGTATaGTCTGTATTTTCCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLIPFRPPDEILLAEATGRIV*SVFSRI Trigger: AATCCTGGAAAATACAGAGCATACGATGCGACCTGT...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175887.8 |
||
| CDS-3UTR CCA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTTCCAAGGATCTTCAGTaGCATTCACATAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLIPFRPPDEILLAEASKDLQ*HSHKTQ Trigger: CTGGGTTTTATGTGAATGCCACTGAAGATCCTTGGA...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CCA 90 bp | AGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCACTCCAATAGACATCCTCTGTaGGTCCACTGGGAAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKAIQLQEHDLLRGSQHSNRHPL*VHWEIG Trigger: GCCAATTTCCCAGTGGACCCACAGAGGATGTCTATT...GGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | AGTCTGCCACAGACAGTGTGCCTGACTCTCCTGTGCCCGTTTCCCTATCCTCTTGTCAGCGATGAAAGTTaGAATGAAGTAGTAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SLPQTVCLTLLCPFPYPLVSDES*NEVVAM Trigger: CATAGCTACTACTTCATTGCAACTTTCATCGCTGAC...AAGAGGATAGGGAAACGGGCACAGGAGAGTCAGGCACACTGTCTGTGGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR CCA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGTCCAAGGATCTTCAGTaGCATTCACATAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SALLLIPFRPPDEILLAESKDLQ*HSHKTQ Trigger: CTGGGTTTTATGTGAATGCCACTGAAGATCCTTGGA...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCACCCTCTGTGGGTCCACTaGGAAATTGGCATTTATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FRKAIQLQEHDLLRGSQHPLWVH*EIGIYE Trigger: CTCATAAATGCCAATTTCCCAGTGGACCCACAGAGG...GTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| 3UTR CAA 72 bp | TGCCCGTTTCCCTATCCTCTTAATGACTGGCCATCATaGCCTTCTAGAAATCAGATCCTCGACAGACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: CPFPYPLNDWPS*PSRNQILDRQE Trigger: CTCCTGTCTGTCGAGGATCTGATTTCTAGAAGGCAATGATGGCCAGTCATTAAGAGGATAGGGAAACGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR TCA 90 bp | CCTCTTAATGACTGGCCATCATTGCCTTCTAGAAATCAGATCCTCGACAGACAGTGTCATCTTCTCCTTTaGTATTGCAGCCACGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLNDWPSLPSRNQILDRQCHLLL*YCSHEG Trigger: GCCCTCGTGGCTGCAATATCAAAGGAGAAGATGACA...CTGTCTGTCGAGGATCTGATTTCTAGAAGGCAATGATGGCCAGTCATTAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR TCA 90 bp | GGCCATCATTGCCTTCTAGAAATCAGATCCTCGACAGACAGGAGAGAAAGGTACGGAAATTGGCATTTATaGGTTGTGGAAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GHHCLLEIRSSTDRRERYGNWHL*VVEAPR Trigger: CCGAGGAGCTTCCACAACTCATAAATGCCAATTTCC...GTACCTTTCTCTCCTGTCTGTCGAGGATCTGATTTCTAGAAGGCAATGATGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGAATTGGAGCAAATGCTaGCACAGATCTGTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SALLLIPFRPPDEILLAENWSKC*HRSVFS Trigger: GGAAAATACAGATCTGTGTCAGCATTTGCTCCAATT...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGTTATCAGGGAGTAACTaGCCATTTGAAAGAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SALLLIPFRPPDEILLAELSGSN*PFERNS Trigger: CGAGTTTCTTTCAAATGGGCAGTTACTCCCTGATAA...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGTCAGCGATGAAAGTTaGAATGAAGTAGTAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: SALLLIPFRPPDEILLAEVSDES*NEVVAM Trigger: CATAGCTACTACTTCATTGCAACTTTCATCGCTGAC...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGAGCCAGACTTTGATATaGAATTTTGTTCTGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SALLLIPFRPPDEILLAESQTLI*NFVLCK Trigger: CTTGCACAGAACAAAATTTCATATCAAAGTCTGGCT...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGGTGGAAGCTCCTCGGTaGCGTAAGAGTACATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SMVSDVVSDESCNEVVAMVEAPR*RKSTFC Trigger: ACAGAATGTACTCTTACGTCACCGAGGAGCTTCCAC...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTTGGCCTCCCATGGAGTaGCCAAAAATAGACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSMVSDVVSDESCNEVVAWPPME*PKIDIL Trigger: GAGGATGTCTATTTTTGGTCACTCCATGGGAGGCCA...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCACTCCTGTAGCCAGACTTTGATATaGAATTTTGTTCTGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KAIQLQEHDLLRGSQHSCSQTLI*NFVLCK Trigger: CTTGCACAGAACAAAATTTCATATCAAAGTCTGGCT...ACAGGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | TATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTGTGGAAGCTCCTCGGTaGCGTAAGAGTACATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YLFRKAIQLQEHDLLRGSVEAPR*RKSTFC Trigger: ACAGAATGTACTCTTACGTCACCGAGGAGCTTCCAC...ACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | ATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCGGAAATTGGCATTTATaGGTTGTGGAAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: IYSEKRFSCRSMIFCEEVGNWHL*VVEAPR Trigger: CCGAGGAGCTTCCACAACTCATAAATGCCAATTTCC...GACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGGGAAATTGGCATTTATaGGTTGTGGAAGCTCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SMVSDVVSDESCNEVVAMGNWHL*VVEAPR Trigger: CCGAGGAGCTTCCACAACTCATAAATGCCAATTTCC...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR TCA 90 bp | TTATCTATTGATCTTTTCGGGGAGCAGTGTGGGTATTTACAGAGACCAGTGACTTGGCCTCCCATGGAGTaGCCAAAAATAGACATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSIDLFGEQCGYLQRPVTWPPME*PKIDIL Trigger: GAGGATGTCTATTTTTGGTCACTCCATGGGAGGCCA...AGTCACTGGTCTCTGTAAATACCCACACTGCTCCCCGAAAAGATCAATAGATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR TCA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTCTGTGCAGGCAGCTATaGAGTTATCAGGGAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LSMVSDVVSDESCNEVVALCRQL*SYQGVT Trigger: AGTTACTCCCTGATAACTTCATAGCTGCCTGCACAG...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTAATAGACATCCTCTGTaGGTCCACTGGGAAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSMVSDVVSDESCNEVVANRHPL*VHWEIG Trigger: GCCAATTTCCCAGTGGACCCACAGAGGATGTCTATT...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR TCA 90 bp | ATATATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAGTGGAAGCTCCTCGGTaGCGTAAGAGTACATTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IYLFRKAIQLQEHDLLRGVEAPR*RKSTFC Trigger: ACAGAATGTACTCTTACGTCACCGAGGAGCTTCCAC...TCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAACACAGCACAGGGTTaGAAATTGGAGCAAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: IYSEKRFSCRSMIFCEEVNTAQG*KLEQML Trigger: CAGCATTTGCTCCAATTTGCAACCCTGTGCTGTGTT...GACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTAACACAGCACAGGGTTaGAAATTGGAGCAAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSMVSDVVSDESCNEVVANTAQG*KLEQML Trigger: CAGCATTTGCTCCAATTTGCAACCCTGTGCTGTGTT...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCTCCAAGGATCTTCAGTaGCATTCACATAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IYSEKRFSCRSMIFCEEVSKDLQ*HSHKTQ Trigger: CTGGGTTTTATGTGAATGCCACTGAAGATCCTTGGA...GACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CCA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTTCCAAGGATCTTCAGTaGCATTCACATAAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSMVSDVVSDESCNEVVASKDLQ*HSHKTQ Trigger: CTGGGTTTTATGTGAATGCCACTGAAGATCCTTGGA...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR TCA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGAATTGGAGCAAATGCTaGCACAGATCTGTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SMVSDVVSDESCNEVVAMNWSKC*HRSVFS Trigger: GGAAAATACAGATCTGTGTCAGCATTTGCTCCAATT...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCGTCAGCGATGAAAGTTaGAATGAAGTAGTAGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: IYSEKRFSCRSMIFCEEVVSDES*NEVVAM Trigger: CATAGCTACTACTTCATTGCAACTTTCATCGCTGAC...GACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR TCA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTAGCCAGACTTTGATATaGAATTTTGTTCTGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSMVSDVVSDESCNEVVASQTLI*NFVLCK Trigger: CTTGCACAGAACAAAATTTCATATCAAAGTCTGGCT...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR TCA 90 bp | TTATCTATTGATCTTTTCGGGGAGCAGTGTGGGTATTTACAGAGACCAGTGACTAATTGGAGCAAATGCTaGCACAGATCTGTATTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSIDLFGEQCGYLQRPVTNWSKC*HRSVFS Trigger: GGAAAATACAGATCTGTGTCAGCATTTGCTCCAATT...AGTCACTGGTCTCTGTAAATACCCACACTGCTCCCCGAAAAGATCAATAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR TCA 90 bp | ACTCAGAAAACCTACCAAGCATTAAACTCCTACGTGAATGGTGGTAAAATAACACTGTGCAGGCAGCTATaGAGTTATCAGGGAGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: TQKTYQALNSYVNGGKITLCRQL*SYQGVT Trigger: AGTTACTCCCTGATAACTTCATAGCTGCCTGCACAG...TGTTATTTTACCACCATTCACGTAGGAGTTTAATGCTTGGTAGGTTTTCTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR GCA 90 bp | AGGCTACTTAACAGGGAATTCCAAATGACTCAGAAAACCTACCAAGCATTAAACAACACAGCACAGGGTTaGAAATTGGAGCAAATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLLNREFQMTQKTYQALNNTAQG*KLEQML Trigger: CAGCATTTGCTCCAATTTGCAACCCTGTGCTGTGTT...GTTTAATGCTTGGTAGGTTTTCTGAGTCATTTGGAATTCCCTGTTAAGTAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS-3UTR TCA 90 bp | TATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTAGCCAGACTTTGATATaGAATTTTGTTCTGTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YLFRKAIQLQEHDLLRGSSQTLI*NFVLCK Trigger: CTTGCACAGAACAAAATTTCATATCAAAGTCTGGCT...ACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR GCA 90 bp | ATATATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGATTATCAGGGAGTAACTaGCCATTTGAAAGAAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: IYLFRKAIQLQEHDLLRGLSGSN*PFERNS Trigger: CGAGTTTCTTTCAAATGGGCAGTTACTCCCTGATAA...TCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS TCA 90 bp | AAACTTTCTGGAGCCCGCCAAAGCACCTGTTGCTGGAAATCTGTTTaGGCGCCATTCTCCTCCGCGGCGGGAAGGGTGCAGAGATCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSGARQSTCCWKSV*APFSSAAGRVQRSS Trigger: TGACGATCTCTGCACCCTTCCCGCCGCGGAGGAGAATGGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCCAGAAAGTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTCCGCCAAAGCACCTGTaGCTGGAAATCTGTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLIPFRPPDEILLAEAPPKHL*LEICLS Trigger: GCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGG...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTCCGCCAAAGCACCTGTaGCTGGAAATCTGTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KSALLLIPFRPPDEILLAPPKHL*LEICLS Trigger: GCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGG...AGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGTCTTCTCCTTTGATATaGCAGCCACGAGGGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SALLLIPFRPPDEILLAESSPLI*QPRGLV Trigger: TACCAGCCCTCGTGGCTGCAATATCAAAGGAGAAGA...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGCTGTCATCTTCTCCTTaGATATTGCAGCCACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SALLLIPFRPPDEILLAELSSSP*ILQPRG Trigger: CCCTCGTGGCTGCAATATCAAAGGAGAAGATGACAG...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTATTGGCATTTATGAGTaGTGGAAGCTCCTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLIPFRPPDEILLAEAIGIYE*WKLLGD Trigger: GTCACCGAGGAGCTTCCACAACTCATAAATGCCAAT...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCACTCCTGTCTGTCATCTTCTCCTTaGATATTGCAGCCACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KAIQLQEHDLLRGSQHSCLSSSP*ILQPRG Trigger: CCCTCGTGGCTGCAATATCAAAGGAGAAGATGACAG...ACAGGAGTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTCTGTCATCTTCTCCTTaGATATTGCAGCCACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSALLLIPFRPPDEILLALSSSP*ILQPRG Trigger: CCCTCGTGGCTGCAATATCAAAGGAGAAGATGACAG...AGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGATTGGCATTTATGAGTaGTGGAAGCTCCTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SALLLIPFRPPDEILLAEIGIYE*WKLLGD Trigger: GTCACCGAGGAGCTTCCACAACTCATAAATGCCAAT...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGGGTCCACTGGGAAATaGGCATTTATGAGTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SALLLIPFRPPDEILLAEGSTGK*AFMSCG Trigger: TCCACAACTCATAAATGCCAATTTCCCAGTGGACCC...CTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | GCACTCCTGTTGATTCCCTTCCGGCCTCCTGATGAGATTCTCTTGGCTGAGGCTGGAGTAACTGCCCATTaGAAAGAAACTCGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLLIPFRPPDEILLAEAGVTAH*KETRHL Trigger: AAGATGACGAGTTTCTTTCAAATGGGCAGTTACTCC...AGCCTCAGCCAAGAGAATCTCATCAGGAGGCCGGAAGGGAATCAACAGGAGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 |
||
| CDS TCA 90 bp | GGATTTTTCAAAGCACAAATCAGAGCTCCGTGGCCTCCCATGGAGTaGCCAAAAATAGACATCCTCTGTGGGTCCACTGGGAAATTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFFKAQIRAPWPPME*PKIDILCGSTGKLA Trigger: TGCCAATTTCCCAGTGGACCCACAGAGGATGTCTATTTTTGGTCACTCCATGGGAGGCCACGGAGCTCTGATTTGTGCTTTGAAAAATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 6 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS-3UTR CAA 90 bp | TTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCACGGGTCCACTGGGAAATaGGCATTTATGAGTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: FRKAIQLQEHDLLRGSQHGSTGK*AFMSCG Trigger: TCCACAACTCATAAATGCCAATTTCCCAGTGGACCC...GTGCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTCCGCCAAAGCACCTGTaGCTGGAAATCTGTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSMVSDVVSDESCNEVVAPPKHL*LEICLS Trigger: GCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGG...AGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CAA 90 bp | TATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCAGCGAACACAGCACAGGGTaGCAAATTGGAGCAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: YSEKRFSCRSMIFCEEVSEHSTG*QIGANA Trigger: AGCATTTGCTCCAATTTGCAACCCTGTGCTGTGTTC...GCTGACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS TCA 90 bp | CAAGGCCGTGCTCTGAGGCAGCTTGCTGATAGCCAGACTTTGATATaGAATTTTGTTCTGTGCAAGTTAAACCAGACAGCCAGTAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: QGRALRQLADSQTLI*NFVLCKLNQTASKA Trigger: CGCTTTACTGGCTGTCTGGTTTAACTTGCACAGAACAAAATTTCATATCAAAGTCTGGCTATCAGCAAGCTGCCTCAGAGCACGGCCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000022573.17 ENSMUST00000175712.8 ENSMUST00000175887.8 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS GCA 90 bp | AATCTGGGAACCCGAATAGGCCTTCACGAGACAGGTCGCATCGTATaGCTTCCATTTACTTTCATCTGGTCCCAAATATCCACTAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLGTRIGLHETGRIV*LPFTFIWSQISTKS Trigger: GCTTTTAGTGGATATTTGGGACCAGATGAAAGTAAATGGAAGGCATACGATGCGACCTGTCTCGTGAAGGCCTATTCGGGTTCCCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS CCA 90 bp | CTCATTTTACATTTCAGCTCAACACTGCTATGTTCGAAAACTTTCTaGAGCCCGCCAAAGCACCTGTTGCTGGAAATCTGTTTGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: LILHFSSTLLCSKTF*SPPKHLLLEICLSA Trigger: GGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCCAGAAAGTTTTCGAACATAGCAGTGTTGAGCTGAAATGTAAAATGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENSMUST00000022573.17 ENSMUST00000175712.8 ENSMUST00000175887.8 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGCTGTCATCTTCTCCTTaGATATTGCAGCCACGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SMVSDVVSDESCNEVVAMLSSSP*ILQPRG Trigger: CCCTCGTGGCTGCAATATCAAAGGAGAAGATGACAG...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCATTGGCATTTATGAGTaGTGGAAGCTCCTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IYSEKRFSCRSMIFCEEVIGIYE*WKLLGD Trigger: GTCACCGAGGAGCTTCCACAACTCATAAATGCCAAT...GACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGATTGGCATTTATGAGTaGTGGAAGCTCCTCGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SMVSDVVSDESCNEVVAMIGIYE*WKLLGD Trigger: GTCACCGAGGAGCTTCCACAACTCATAAATGCCAAT...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGGGGTCCACTGGGAAATaGGCATTTATGAGTTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SMVSDVVSDESCNEVVAMGSTGK*AFMSCG Trigger: TCCACAACTCATAAATGCCAATTTCCCAGTGGACCC...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGGAACACAGCACAGGGTaGCAAATTGGAGCAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SMVSDVVSDESCNEVVAMEHSTG*QIGANA Trigger: AGCATTTGCTCCAATTTGCAACCCTGTGCTGTGTTC...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CAA 90 bp | ATATATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGATCTTCTCCTTTGATATaGCAGCCACGAGGGCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IYLFRKAIQLQEHDLLRGSSPLI*QPRGLV Trigger: TACCAGCCCTCGTGGCTGCAATATCAAAGGAGAAGA...TCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | TATATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGAACACAGCACAGGGTaGCAAATTGGAGCAAATGCT | + |
|
Preference number: 5 (lower is better) Translates to: YIYSEKRFSCRSMIFCEEEHSTG*QIGANA Trigger: AGCATTTGCTCCAATTTGCAACCCTGTGCTGTGTTC...TTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | ATTTATTCAGAAAAGCGATTCAGCTGCAGGAGCATGATCTTCTGCGAGGAAGTCGGAGTAACTGCCCATTaGAAAGAAACTCGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: IYSEKRFSCRSMIFCEEVGVTAH*KETRHL Trigger: AAGATGACGAGTTTCTTTCAAATGGGCAGTTACTCC...GACTTCCTCGCAGAAGATCATGCTCCTGCAGCTGAATCGCTTTTCTGAATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 |
||
| CDS-3UTR CAA 90 bp | AGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTGCAATGAAGTAGTAGCTATGGGAGTAACTGCCCATTaGAAAGAAACTCGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SMVSDVVSDESCNEVVAMGVTAH*KETRHL Trigger: AAGATGACGAGTTTCTTTCAAATGGGCAGTTACTCC...CATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177137.8 |
||
| CDS-3UTR CAA 90 bp | TTATCTATTGATCTTTTCGGGGAGCAGTGTGGGTATTTACAGAGACCAGTGACTGGAGTAACTGCCCATTaGAAAGAAACTCGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSIDLFGEQCGYLQRPVTGVTAH*KETRHL Trigger: AAGATGACGAGTTTCTTTCAAATGGGCAGTTACTCC...AGTCACTGGTCTCTGTAAATACCCACACTGCTCCCCGAAAAGATCAATAGATAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022573.17 |
||
| CDS TCA 72 bp | GGAGCCCGCCAAAGCACCTGTTGCTGGAAATCTGTTTaGGCGCCATTCTCCTCCGCGGCGGGAAGGGTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GARQSTCCWKSV*APFSSAAGRVQ Trigger: CTGCACCCTTCCCGCCGCGGAGGAGAATGGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176957.8 |
||
| CDS CAA 72 bp | TGGAGCCCGCCAAAGCACCTGTTGCTGGAAATCTGTTaGAGCGCCATTCTCCTCCGCGGCGGGAAGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSPPKHLLLEIC*SAILLRGGKGA Trigger: TGCACCCTTCCCGCCGCGGAGGAGAATGGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176957.8 |
||
| CDS CAA 90 bp | AAAACTTTCTGGAGCCCGCCAAAGCACCTGTTGCTGGAAATCTGTTaGAGCGCCATTCTCCTCCGCGGCGGGAAGGGTGCAGAGATCGTC | + |
|
Preference number: 6 (lower is better) Translates to: KTFWSPPKHLLLEIC*SAILLRGGKGAEIV Trigger: GACGATCTCTGCACCCTTCCCGCCGCGGAGGAGAATGGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCCAGAAAGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176957.8 |
||
| CDS TCA 72 bp | CACCAGTGCCGAAGTCCCAGCTGTCATCTTCTCCTTTaGTATTGCAGCCACGAGGGCTGGTATCAGGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: HQCRSPSCHLLL*YCSHEGWYQGQ Trigger: TTGCCCCTGATACCAGCCCTCGTGGCTGCAATATCAAAGGAGAAGATGACAGCTGGGACTTCGGCACTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022573.17 ENSMUST00000175712.8 ENSMUST00000175887.8 ENSMUST00000176726.2 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS CAA 90 bp | ACACTGCTATGTTCGAAAACTTTCTGGAGCCCGCCAAAGCACCTGTaGCTGGAAATCTGTTTGAGCGCCATTCTCCTCCGCGGCGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TLLCSKTFWSPPKHL*LEICLSAILLRGGK Trigger: CTTCCCGCCGCGGAGGAGAATGGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCCAGAAAGTTTTCGAACATAGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176957.8 |
||
| CDS TCA 72 bp | AAAGCACAAATCAGAGCTCCGTGGCCTCCCATGGAGTaGCCAAAAATAGACATCCTCTGTGGGTCCACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: KAQIRAPWPPME*PKIDILCGSTG Trigger: CCCAGTGGACCCACAGAGGATGTCTATTTTTGGTCACTCCATGGGAGGCCACGGAGCTCTGATTTGTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS CAA 72 bp | TGTTCGAAAACTTTCTGGAGCCCGCCAAAGCACCTGTaGCTGGAAATCTGTTTGAGCGCCATTCTCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: CSKTFWSPPKHL*LEICLSAILLR Trigger: GCGGAGGAGAATGGCGCTCAAACAGATTTCCAGCAACAGGTGCTTTGGCGGGCTCCAGAAAGTTTTCGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176957.8 |
||
| CDS GCA 72 bp | ACCCGAATAGGCCTTCACGAGACAGGTCGCATCGTATaGCTTCCATTTACTTTCATCTGGTCCCAAATATCC | + |
|
Preference number: 6 (lower is better) Translates to: TRIGLHETGRIV*LPFTFIWSQIS Trigger: GGATATTTGGGACCAGATGAAAGTAAATGGAAGGCATACGATGCGACCTGTCTCGTGAAGGCCTATTCGGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022573.17 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS TCA 72 bp | GCTCTGAGGCAGCTTGCTGATAGCCAGACTTTGATATaGAATTTTGTTCTGTGCAAGTTAAACCAGACAGCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRQLADSQTLI*NFVLCKLNQTA Trigger: GGCTGTCTGGTTTAACTTGCACAGAACAAAATTTCATATCAAAGTCTGGCTATCAGCAAGCTGCCTCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022573.17 ENSMUST00000175712.8 ENSMUST00000175887.8 ENSMUST00000176726.2 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 ENSMUST00000177283.8 |
||
| CDS GCA 72 bp | CTTAGCATGGTGTCTGATGTGGTCAGCGATGAAAGTTaGAATGAAGTAGTAGCTATGATCATAACCCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSMVSDVVSDES*NEVVAMIITLL Trigger: GAGGAGGGTTATGATCATAGCTACTACTTCATTGCAACTTTCATCGCTGACCACATCAGACACCATGCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176726.2 |
||
| CDS TCA 72 bp | ACACAACAGGGATTTTCTTCTCTGTGCAGGCAGCTATaGAGTTATCAGGGAGTAACTGCCCATTTGAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: TQQGFSSLCRQL*SYQGVTAHLKE Trigger: TTCTTTCAAATGGGCAGTTACTCCCTGATAACTTCATAGCTGCCTGCACAGAGAAGAAAATCCCTGTTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022573.17 ENSMUST00000175887.8 ENSMUST00000176957.8 ENSMUST00000177137.8 ENSMUST00000177181.8 |
||