Pregenerated sensors for ESCO2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022034Ensembl transcript IDs: ENSMUST00000022613.10, ENSMUST00000225853.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTCAGTTTCTATCTAGCTaGACTTTCCCACATAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSQFLSS*TFPHST Trigger: GGTACTATGTGGGAAAGTTCAGCTAGATAGAAACTG...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| 3UTR TCA 72 bp | GCTCATAGCCGGTGTTTAGAGTCTACTGATGGAGCATaGGACAACCATGGTCTAAAAGTGTGTTCATGTATT | + |
|
Preference number: 3 (lower is better) Translates to: AHSRCLESTDGA*DNHGLKVCSCI Trigger: AATACATGAACACACTTTTAGACCATGGTTGTCTCATGCTCCATCAGTAGACTCTAAACACCGGCTATGAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| 3UTR TCA 72 bp | TTCCATAAGGTCATTATGTTCTTAGGTCCATTAGTCTaGTTCATGACTTCAATTACCTACCAGCATTTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: FHKVIMFLGPLV*FMTSITYQHFH Trigger: ATGAAAATGCTGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACCTTATGGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTGTCCCAAAATGTTTCTaGCCTGCGTCAATGACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSVPKCF*PASMTS Trigger: GCTCGTCATTGACGCAGGTCAGAAACATTTTGGGAC...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTCCCGAAAGGCCTGTTTaGTGGGTTCTGCAATTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFPERPV*WVLQLN Trigger: GTTTAATTGCAGAACCCATCAAACAGGCCTTTCGGG...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTCCTAACGAAAAATGCTaGTCCGCCTTGGAGTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFPNEKC*SALECN Trigger: GTTACACTCCAAGGCGGAGCAGCATTTTTCGTTAGG...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTCTTTGGTATTTGCTTTaGCTCTGGAGCACCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFLWYLL*LWSTFR Trigger: CCTGAAGGTGCTCCAGAGGCAAAGCAAATACCAAAG...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGAAGGGAAATGGAGTTaGTGGGAGCAAGACTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEEGKWS*WEQDLS Trigger: AGACAAGTCTTGCTCCCACCAACTCCATTTCCCTTC...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCAAGGTTCTGGTACATCTaGACACCGCCAAGCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPRFWYI*TPPSSR Trigger: TCTAGAGCTTGGCGGTGTTCAGATGTACCAGAACCT...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAAAAATGTTTCTGACCTaGGTCAATGACGAGCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEKMFLT*VNDELV Trigger: GACCAGCTCGTCATTGACGCAGGTCAGAAACATTTT...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTCCCATCCCAAAACTCTaGTACTACCCGTTCTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFPIPKL*YYPFSF Trigger: AAAAGAGAACGGGTAGTAGCAGAGTTTTGGGATGGG...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTAGAAACTACTGCACCTaGGGGATTCTTTCTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFRNYCT*GILSQF Trigger: AAACTGAGAAAGAATCCCTCAGGTGCAGTAGTTTCT...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTCAAGAAGTTAGTACATaGAGTGGATCCCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFQEVST*SGSHRR Trigger: TCTTCTGTGGGATCCACTGCATGTACTAACTTCTTG...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCACACACGGGAACAGTCTaGTGGAAACCTAATTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPHTGTV*WKPNSR Trigger: TCTGGAATTAGGTTTCCAGCAGACTGTTCCCGTGTG...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTCCAGTCGTCTTGCAATaGGCTTCCTTCTTTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSPVVLQ*ASFFLV Trigger: GACTAAAAAGAAGGAAGCGCATTGCAAGACGACTGG...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTGTCAACCAGTCGTCTTaGAATGCGCTTCCTTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSVNQSS*NALPSF Trigger: AAAAGAAGGAAGCGCATTGCAAGACGACTGGTTGAC...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCTACGATTAATCAGTTTCTATCTAGCTGAACTTTCCCACATAGTACCATATTTGCTTTGCCTCTaGAGCACCTTCAGGGACTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLRLISFYLAELSHIVPYLLCL*STFRDF Trigger: GAAGTCCCTGAAGGTGCTCCAGAGGCAAAGCAAATA...TGGTACTATGTGGGAAAGTTCAGCTAGATAGAAACTGATTAATCGTAGCAGAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGCGTCAATGACGAGCTaGTCTTTTCCTCCTTTATTT | + |
|
Preference number: 4 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEASMTS*SFPPLF Trigger: AAATAAAGGAGGAAAAGACCAGCTCGTCATTGACGC...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAATAACTTGGATCACGTaGCAGGACCAACACAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEITWIT*QDQHNL Trigger: AAGATTGTGTTGGTCCTGCCACGTGATCCAAGTTAT...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTCAGACTGGTTTTCTCTaGATATTTTCTGTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFQTGFL*IFSVTL Trigger: CAGTGTGACAGAAAATATTCAGAGAAAACCAGTCTG...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAATCCTTCTTTTTAGTCTaGAGACCCAGATTCTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SCIPYKGAQFLQKPSCCESFFLV*RPRFYL Trigger: TAAGTAGAATCTGGGTCTTCAGACTAAAAAGAAGGA...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCATGGTTGCAAATAATTTaGCATCTGGTGTTGGGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPWLQII*HLVLGQ Trigger: CTGACCCAACACCAGATGGCAAATTATTTGCAACCA...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | ATTCTGCTACGATTAATCAGTTTCTATCTAGCTGAACTTTCCCACATAGTACCATTTCGTCTTCAGGGTTaGAAGCAGTATAGATCATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLRLISFYLAELSHIVPFRLQG*KQYRSC Trigger: GCATGATCTATACTGCTTCCAACCCTGAAGACGAAA...TGGTACTATGTGGGAAAGTTCAGCTAGATAGAAACTGATTAATCGTAGCAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCATCACTGAAGAAACATTaGAGATGGGATAGACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPSLKKH*RWDRQT Trigger: AGTCTGTCTATCCCATCTTCAATGTTTCTTCAGTGA...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGTTGGGTCAGAAAATaGAATTTCATTAGTGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSCWVRK*NFISAE Trigger: CTCAGCACTAATGAAATTGCATTTTCTGACCCAACA...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR GCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCAGGAAATTTGGGGTGTTaGAGTACTTGGTTGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPGNLGC*STWLQI Trigger: TATTTGCAACCAAGTACTGCAACACCCCAAATTTCC...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTAGATCCACAAGTTCTTaGACATCTTCTACCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSRSTSS*TSSTFL Trigger: CAAAAAGGTAGAAGATGTCCAAGAACTTGTGGATCT...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR TCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCATCTTTTTGTGTTCACTaGAGAAACATTGAAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPSFCVH*RNIEDG Trigger: CCCATCTTCAATGTTTCTTCAGTGAACACAAAAAGA...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCAATATACAAGGAAATTTaGGGTGTTGCAGTACTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPIYKEI*GVAVLG Trigger: ACCAAGTACTGCAACACCCCAAATTTCCTTGTATAT...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCACTTCTTGGTACAGACTaGTTTTCTCTGAATATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPLLGTD*FSLNIF Trigger: GAAAATATTCAGAGAAAACCAGTCTGTACCAAGAAG...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CCA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCAATAGGTCACTTGATTTaGCTTGGAATTTTTCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHYVLRSISLIHDFNYLPIGHLI*LGIFQV Trigger: AACCTGAAAAATTCCAAGCCAAATCAAGTGACCTAT...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CCA 90 bp | GAAATCGGTGGTGATGTTGGAGATGTTGTATTTCGTCTTCAGGGTTaGAAGCAGTATAGATCATGCCACAAGACTTACACACAGTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: EIGGDVGDVVFRLQG*KQYRSCHKTYTQSS Trigger: GGACGACTGTGTGTAAGTCTTGTGGCATGATCTATACTGCTTCCAACCCTGAAGACGAAATACAACATCTCCAACATCACCACCGATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CCA 90 bp | AAGAGGAAGGTTTTGGTTTTGTCTGGACACACGGGAACAGTCTGCTaGAAACCTAATTCCAGATCCACAAGTTCTTGGACATCTTCTACC | + |
|
Preference number: 5 (lower is better) Translates to: KRKVLVLSGHTGTVC*KPNSRSTSSWTSST Trigger: GGTAGAAGATGTCCAAGAACTTGTGGATCTGGAATTAGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS GCA 90 bp | GGAGATGTTGTATTTCGTCTTCAGGGTTGGAAGCAGTATAGATCATaGCACAAGACTTACACACAGTCGTCCCAAAATGTTTCTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GDVVFRLQGWKQYRS*HKTYTQSSQNVSDL Trigger: CAGGTCAGAAACATTTTGGGACGACTGTGTGTAAGTCTTGTGGCATGATCTATACTGCTTCCAACCCTGAAGACGAAATACAACATCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAAAATGCTGCTCCGCCTaGGAGTGTAACTTGAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEKCCSA*ECNLRL Trigger: AAGCCTCAAGTTACACTCCAAGGCGGAGCAGCATTT...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAACAAGGACTTTGGTATTaGCTTTGCCTCTGGAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEQGLWY*LCLWST Trigger: GGTGCTCCAGAGGCAAAGCAAATACCAAAGTCCTTG...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 90 bp | AACCTAATTCCAGATCCACAAGTTCTTGGACATCTTCTACCTTTTTaGTGGCATAACTTGGATCACGTGGCAGGACCAACACAATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLIPDPQVLGHLLPF*WHNLDHVAGPTQSS Trigger: GGAAGATTGTGTTGGTCCTGCCACGTGATCCAAGTTATGCCATCAAAAAGGTAGAAGATGTCCAAGAACTTGTGGATCTGGAATTAGGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 90 bp | ATTCTTTACTGGCACTTGGTTCTGACAGGACCCGAAAGGCCTGTTTaGTGGGTTCTGCAATTAAACATCCAACTACTCTCTTCTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: ILYWHLVLTGPERPV*WVLQLNIQLLSSHQ Trigger: TTGATGAGAAGAGAGTAGTTGGATGTTTAATTGCAGAACCCATCAAACAGGCCTTTCGGGTCCTGTCAGAACCAAGTGCCAGTAAAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS GCA 90 bp | ATAAAGAGGAAGGTTTTGGTTTTGTCTGGACACACGGGAACAGTCTaGTGGAAACCTAATTCCAGATCCACAAGTTCTTGGACATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IKRKVLVLSGHTGTV*WKPNSRSTSSWTSS Trigger: AGAAGATGTCCAAGAACTTGTGGATCTGGAATTAGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCTCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTTTGAGGCTTTATTTTTaGGCTCAGAACCCGAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFLRLYF*AQNPRR Trigger: CCTCCTCGGGTTCTGAGCCAAAAAATAAAGCCTCAA...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTTGTCAACCAGTCGTCTaGCAATGCGCTTCCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFCQPVV*QCASFF Trigger: AAAGAAGGAAGCGCATTGCAAGACGACTGGTTGACA...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 90 bp | AGTGGATCCCACAGAAGACTGTTCTTCAGGTCTTTTTGTGTTCACTaGAGAAACATTGAAGATGGGATAGACAGACTCTGGGGAAATTGT | + |
|
Preference number: 5 (lower is better) Translates to: SGSHRRLFFRSFCVH*RNIEDGIDRLWGNC Trigger: ACAATTTCCCCAGAGTCTGTCTATCCCATCTTCAATGTTTCTTCAGTGAACACAAAAAGACCTGAAGAACAGTCTTCTGTGGGATCCACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTATCGCTTCCTCTTTCTaGGAGTACAAGTTGCCATCA | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFIASSF*EYKLPS Trigger: TGATGGCAACTTGTACTCCAAGAAAGAGGAAGCGAT...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTGGGGTGTTGCAGTACTaGGTTGCAAATAATTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFGVLQY*VANNLP Trigger: TGGCAAATTATTTGCAACCAAGTACTGCAACACCCC...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCACCACTAGCAAGGACTTaGGTATTTGCTTTGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHYVLRSISLIHDFNYLPPLART*VFALPL Trigger: CAGAGGCAAAGCAAATACCAAAGTCCTTGCTAGTGG...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTCAGACTCTGGGGAAATaGTCTTGTTCTCATCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSQTLGK*SCSHQV Trigger: CACTTGATGAGAACAAGACAATTTCCCCAGAGTCTG...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTGTGATGTTGGAGATGTaGTATTTCGTCTTCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFVMLEM*YFVFRV Trigger: AACCCTGAAGACGAAATACAACATCTCCAACATCAC...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCAAGGAAGGTTTTGGTTTaGTCTGGACACACGGGAACA | + |
|
Preference number: 5 (lower is better) Translates to: GHYVLRSISLIHDFNYLPRKVLV*SGHTGT Trigger: TGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCT...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | TCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAATAAAGAGGAAGGTTTaGGTTTTGTCTGGACACACG | + |
|
Preference number: 5 (lower is better) Translates to: SCIPYKGAQFLQKPSCCEIKRKV*VLSGHT Trigger: CGTGTGTCCAGACAAAACCAAAACCTTCCTCTTTAT...TTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTAGGAAATTTGGGGTGTaGCAGTACTTGGTTGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFRKFGV*QYLVAN Trigger: ATTTGCAACCAAGTACTGCAACACCCCAAATTTCCT...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTCAAGGTTACATTCCTTaGAAGAAACTACTGCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSQGYIP*KKLLHL Trigger: CAGGTGCAGTAGTTTCTTCAAAGGAATGTAACCTTG...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTAAATCGGTGGTGATGTaGGAGATGTTGTATTTCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSKSVVM*EMLYFV Trigger: GACGAAATACAACATCTCCAACATCACCACCGATTT...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCAACCCGAAAGGCCTGTTaGATGGGTTCTGCAATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHYVLRSISLIHDFNYLPTRKAC*MGSAIK Trigger: TTTAATTGCAGAACCCATCAAACAGGCCTTTCGGGT...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGCTGTGAAGTTTTATAGGTCACTTGATTaGGCTTGGAATTTTTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFLIKEPSFCKSHLAVKFYRSLD*AWNFSG Trigger: ACCTGAAAAATTCCAAGCCAAATCAAGTGACCTATA...AAACTTCACAGCAAGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | ATTCTGCTACGATTAATCAGTTTCTATCTAGCTGAACTTTCCCACATAGTACCATTGGTTGCAAATAATTaGCCATCTGGTGTTGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ILLRLISFYLAELSHIVPLVANN*PSGVGS Trigger: TGACCCAACACCAGATGGCAAATTATTTGCAACCAA...TGGTACTATGTGGGAAAGTTCAGCTAGATAGAAACTGATTAATCGTAGCAGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTTGTTGCAGTACTTGGTaGCAAATAATTTGCCATCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSCCSTW*QIICHL Trigger: CAGATGGCAAATTATTTGCAACCAAGTACTGCAACA...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | AAAGTGTGTTCATGTATTCCTTATAAAGGAGCCCAGTTTCTGCAAAAGCCATCTGTTCTTCAGGTCTTTTaGTGTTCACTGAAGAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: KVCSCIPYKGAQFLQKPSVLQVF*CSLKKH Trigger: ATGTTTCTTCAGTGAACACAAAAAGACCTGAAGAAC...AGATGGCTTTTGCAGAAACTGGGCTCCTTTATAAGGAATACATGAACACACTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | ATTCTGCTACGATTAATCAGTTTCTATCTAGCTGAACTTTCCCACATAGTACCACAGATCCACAAGTTCTaGGACATCTTCTACCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILLRLISFYLAELSHIVPQIHKF*DIFYLF Trigger: AAAAAGGTAGAAGATGTCCAAGAACTTGTGGATCTG...TGGTACTATGTGGGAAAGTTCAGCTAGATAGAAACTGATTAATCGTAGCAGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCATACTTATTCCACAAATaGCAGGTTCTGGTACATCTG | + |
|
Preference number: 5 (lower is better) Translates to: GHYVLRSISLIHDFNYLPYLFHK*QVLVHL Trigger: CAGATGTACCAGAACCTGCAATTTGTGGAATAAGTA...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | GGTCATTATGTTCTTAGGTCCATTAGTCTGATTCATGACTTCAATTACCTACCACTATTTTCAGTTGTTTaGAGTGGACTTGAAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: GHYVLRSISLIHDFNYLPLFSVV*SGLEGK Trigger: TTTCCCTTCAAGTCCACTCAAAACAACTGAAAATAG...TGGTAGGTAATTGAAGTCATGAATCAGACTAATGGACCTAAGAACATAATGACC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS-3UTR CAA 90 bp | ATTCTGCTACGATTAATCAGTTTCTATCTAGCTGAACTTTCCCACATAGTACCATGGCTTATAGGTCACTaGATTTGGCTTGGAATTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ILLRLISFYLAELSHIVPWLIGH*IWLGIF Trigger: AAAAATTCCAAGCCAAATCAAGTGACCTATAAGCCA...TGGTACTATGTGGGAAAGTTCAGCTAGATAGAAACTGATTAATCGTAGCAGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 72 bp | CCAAGCTCTAGAACATTCTTTACTGGCACTTGGTTCTaGCAGGACCCGAAAGGCCTGTTTGATGGGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSRTFFTGTWF*QDPKGLFDGFC Trigger: GCAGAACCCATCAAACAGGCCTTTCGGGTCCTGTCAGAACCAAGTGCCAGTAAAGAATGTTCTAGAGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 72 bp | CCAGATCCACAAGTTCTTGGACATCTTCTACCTTTTTaGTGGCATAACTTGGATCACGTGGCAGGACCAACA | + |
|
Preference number: 6 (lower is better) Translates to: PDPQVLGHLLPF*WHNLDHVAGPT Trigger: TGTTGGTCCTGCCACGTGATCCAAGTTATGCCATCAAAAAGGTAGAAGATGTCCAAGAACTTGTGGATCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS GCA 72 bp | AAGGTTTTGGTTTTGTCTGGACACACGGGAACAGTCTaGTGGAAACCTAATTCCAGATCCACAAGTTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KVLVLSGHTGTV*WKPNSRSTSSW Trigger: CCAAGAACTTGTGGATCTGGAATTAGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CCA 72 bp | GTTTTGGTTTTGTCTGGACACACGGGAACAGTCTGCTaGAAACCTAATTCCAGATCCACAAGTTCTTGGACA | + |
|
Preference number: 6 (lower is better) Translates to: VLVLSGHTGTVC*KPNSRSTSSWT Trigger: TGTCCAAGAACTTGTGGATCTGGAATTAGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | CCAACTACTCTCTTCTCATCAATAAAGAGGAAGGTTTaGGTTTTGTCTGGACACACGGGAACAGTCTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PTTLFSSIKRKV*VLSGHTGTVCW Trigger: CCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCTCTTTATTGATGAGAAGAGAGTAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | CATTCTTTACTGGCACTTGGTTCTGACAGGACCCGAAAGGCCTGTTaGATGGGTTCTGCAATTAAACATCCAACTACTCTCTTCTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: HSLLALGSDRTRKAC*MGSAIKHPTTLFSS Trigger: TGATGAGAAGAGAGTAGTTGGATGTTTAATTGCAGAACCCATCAAACAGGCCTTTCGGGTCCTGTCAGAACCAAGTGCCAGTAAAGAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS GCA 72 bp | AGACTTACACACAGTCGTCCCAAAATGTTTCTGACCTaGGTCAATGACGAGCTGGTCTTTTCCTCCTTTATT | + |
|
Preference number: 6 (lower is better) Translates to: RLTHSRPKMFLT*VNDELVFSSFI Trigger: AATAAAGGAGGAAAAGACCAGCTCGTCATTGACGCAGGTCAGAAACATTTTGGGACGACTGTGTGTAAGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CCA 72 bp | TTCTTGGACATCTTCTACCTTTTTGATGGCATAACTTaGATCACGTGGCAGGACCAACACAATCTTCCCATC | + |
|
Preference number: 6 (lower is better) Translates to: FLDIFYLFDGIT*ITWQDQHNLPI Trigger: GATGGGAAGATTGTGTTGGTCCTGCCACGTGATCCAAGTTATGCCATCAAAAAGGTAGAAGATGTCCAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | TGCTCCGCCTTGGAGTGTAACTTGAGGCTTTATTTTTaGGCTCAGAACCCGAGGAGGAGAATTTGGATAATT | + |
|
Preference number: 6 (lower is better) Translates to: CSALECNLRLYF*AQNPRRRIWII Trigger: AATTATCCAAATTCTCCTCCTCGGGTTCTGAGCCAAAAAATAAAGCCTCAAGTTACACTCCAAGGCGGAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | ATTTCTCATCCACTAGCAAGGACTTTGGTATTTGCTTaGCCTCTGGAGCACCTTCAGGGACTTCTGGTAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ISHPLARTLVFA*PLEHLQGLLVN Trigger: ATTTACCAGAAGTCCCTGAAGGTGCTCCAGAGGCAAAGCAAATACCAAAGTCCTTGCTAGTGGATGAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | ACTCTCTTCTCATCAATAAAGAGGAAGGTTTTGGTTTaGTCTGGACACACGGGAACAGTCTGCTGGAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: TLFSSIKRKVLV*SGHTGTVCWKP Trigger: AGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCTCTTTATTGATGAGAAGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | CATCCAACTACTCTCTTCTCATCAATAAAGAGGAAGGTTTTGGTTTaGTCTGGACACACGGGAACAGTCTGCTGGAAACCTAATTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HPTTLFSSIKRKVLV*SGHTGTVCWKPNSR Trigger: TCTGGAATTAGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCTCTTTATTGATGAGAAGAGAGTAGTTGGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS GCA 72 bp | GTATTTCGTCTTCAGGGTTGGAAGCAGTATAGATCATaGCACAAGACTTACACACAGTCGTCCCAAAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: VFRLQGWKQYRS*HKTYTQSSQNV Trigger: AACATTTTGGGACGACTGTGTGTAAGTCTTGTGGCATGATCTATACTGCTTCCAACCCTGAAGACGAAATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CCA 72 bp | GGTGATGTTGGAGATGTTGTATTTCGTCTTCAGGGTTaGAAGCAGTATAGATCATGCCACAAGACTTACACA | + |
|
Preference number: 6 (lower is better) Translates to: GDVGDVVFRLQG*KQYRSCHKTYT Trigger: TGTGTAAGTCTTGTGGCATGATCTATACTGCTTCCAACCCTGAAGACGAAATACAACATCTCCAACATCACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | CACGAATTTAATTCCTTCCAGAAATCGGTGGTGATGTaGGAGATGTTGTATTTCGTCTTCAGGGTTGGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HEFNSFQKSVVM*EMLYFVFRVGS Trigger: GCTTCCAACCCTGAAGACGAAATACAACATCTCCAACATCACCACCGATTTCTGGAAGGAATTAAATTCGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | CACGAATTTAATTCCTTCCAGAAATCGGTGGTGATGTTGGAGATGTaGTATTTCGTCTTCAGGGTTGGAAGCAGTATAGATCATGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: HEFNSFQKSVVMLEM*YFVFRVGSSIDHAT Trigger: TGTGGCATGATCTATACTGCTTCCAACCCTGAAGACGAAATACAACATCTCCAACATCACCACCGATTTCTGGAAGGAATTAAATTCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | TTTCCAGCCCACGAATTTAATTCCTTCCAGAAATCGGTGGTGATGTaGGAGATGTTGTATTTCGTCTTCAGGGTTGGAAGCAGTATAGAT | + |
|
Preference number: 6 (lower is better) Translates to: FPAHEFNSFQKSVVM*EMLYFVFRVGSSID Trigger: ATCTATACTGCTTCCAACCCTGAAGACGAAATACAACATCTCCAACATCACCACCGATTTCTGGAAGGAATTAAATTCGTGGGCTGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS GCA 72 bp | TCTGGAGCACCTTCAGGGACTTCTGGTAAATTTTTCTaGAAAAGTAAGGGCTTATCTTCCAGAGGTAACTTT | + |
|
Preference number: 6 (lower is better) Translates to: SGAPSGTSGKFF*KSKGLSSRGNF Trigger: AAAGTTACCTCTGGAAGATAAGCCCTTACTTTTGCAGAAAAATTTACCAGAAGTCCCTGAAGGTGCTCCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | AATTCCTTCCAGAAATCGGTGGTGATGTTGGAGATGTaGTATTTCGTCTTCAGGGTTGGAAGCAGTATAGAT | + |
|
Preference number: 6 (lower is better) Translates to: NSFQKSVVMLEM*YFVFRVGSSID Trigger: ATCTATACTGCTTCCAACCCTGAAGACGAAATACAACATCTCCAACATCACCACCGATTTCTGGAAGGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | ATTAAACATCCAACTACTCTCTTCTCATCAATAAAGAGGAAGGTTTaGGTTTTGTCTGGACACACGGGAACAGTCTGCTGGAAACCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: IKHPTTLFSSIKRKV*VLSGHTGTVCWKPN Trigger: ATTAGGTTTCCAGCAGACTGTTCCCGTGTGTCCAGACAAAACCAAAACCTTCCTCTTTATTGATGAGAAGAGAGTAGTTGGATGTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 72 bp | GTTCTTCAGGTCTTTTTGTGTTCACTGAAGAAACATTaGAGATGGGATAGACAGACTCTGGGGAAATTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLQVFLCSLKKH*RWDRQTLGKLS Trigger: AGACAATTTCCCCAGAGTCTGTCTATCCCATCTTCAATGTTTCTTCAGTGAACACAAAAAGACCTGAAGAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | TATACAAGGAAATTTGGGGTGTTGCAGTACTTGGTTGCAAATAATTaGCCATCTGGTGTTGGGTCAGAAAATGCAATTTCATTAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: YTRKFGVLQYLVANN*PSGVGSENAISLVL Trigger: CAGCACTAATGAAATTGCATTTTCTGACCCAACACCAGATGGCAAATTATTTGCAACCAAGTACTGCAACACCCCAAATTTCCTTGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CCA 72 bp | AATTATATACAAGGAAATTTGGGGTGTTGCAGTACTTaGTTGCAAATAATTTGCCATCTGGTGTTGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: NYIQGNLGCCST*LQIICHLVLGQ Trigger: CTGACCCAACACCAGATGGCAAATTATTTGCAACCAAGTACTGCAACACCCCAAATTTCCTTGTATATAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | AAATTTGGGGTGTTGCAGTACTTGGTTGCAAATAATTaGCCATCTGGTGTTGGGTCAGAAAATGCAATTTCA | + |
|
Preference number: 6 (lower is better) Translates to: KFGVLQYLVANN*PSGVGSENAIS Trigger: TGAAATTGCATTTTCTGACCCAACACCAGATGGCAAATTATTTGCAACCAAGTACTGCAACACCCCAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 72 bp | ATCTACACTCTCTTATCAACTTCCTCTCGAGTGGATTaGGGTAGTATTTCTCTTTACTGTAGAAAGATACAG | + |
|
Preference number: 6 (lower is better) Translates to: IYTLLSTSSRVD*GSISLYCRKIQ Trigger: CTGTATCTTTCTACAGTAAAGAGAAATACTACCTCAATCCACTCGAGAGGAAGTTGATAAGAGAGTGTAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | GAAATGGAGTTGGTGGGAGCAAGACTTGTCTTCCTTTaGAACACTGCTTTGATAATTATGTTTCTTATTAGG | + |
|
Preference number: 6 (lower is better) Translates to: EMELVGARLVFL*NTALIIMFLIR Trigger: CCTAATAAGAAACATAATTATCAAAGCAGTGTTCAAAAGGAAGACAAGTCTTGCTCCCACCAACTCCATTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 72 bp | CTGAAGGAAAATCATGTTTATCAAGGTTACATTCCTTaGAAGAAACTACTGCACCTGAGGGATTCTTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: LKENHVYQGYIP*KKLLHLRDSFS Trigger: TGAGAAAGAATCCCTCAGGTGCAGTAGTTTCTTCAAAGGAATGTAACCTTGATAAACATGATTTTCCTTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS CAA 90 bp | GTGAATTCTCTGAAGGAAAATCATGTTTATCAAGGTTACATTCCTTaGAAGAAACTACTGCACCTGAGGGATTCTTTCTCAGTTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VNSLKENHVYQGYIP*KKLLHLRDSFSVSL Trigger: AAGAGAAACTGAGAAAGAATCCCTCAGGTGCAGTAGTTTCTTCAAAGGAATGTAACCTTGATAAACATGATTTTCCTTCAGAGAATTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022613.10 |
||
| CDS TCA 72 bp | ATCTACACTCTCTTATCAACTTCCTCTCGAGTGGATTaGGGTAGTATTTCTCTTTACTATCATCATTATCAG | + |
|
Preference number: 6 (lower is better) Translates to: IYTLLSTSSRVD*GSISLYYHHYQ Trigger: CTGATAATGATGATAGTAAAGAGAAATACTACCTCAATCCACTCGAGAGGAAGTTGATAAGAGAGTGTAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225853.2 |
||
| CDS CCA 72 bp | AATAGATCTACACTCTCTTATCAACTTCCTCTCGAGTaGATTGAGGTAGTATTTCTCTTTACTATCATCATT | + |
|
Preference number: 6 (lower is better) Translates to: NRSTLSYQLPLE*IEVVFLFTIII Trigger: AATGATGATAGTAAAGAGAAATACTACCTCAATCCACTCGAGAGGAAGTTGATAAGAGAGTGTAGATCTATT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225853.2 |
||