Pregenerated sensors for ESCO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024293Ensembl transcript IDs: ENSMUST00000025142.13, ENSMUST00000097670.10, ENSMUST00000115864.8, ENSMUST00000127099.9, ENSMUST00000145320.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTaGGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: KMKSSNEGVYSVQYF*GITTQIPSRPHLVY Trigger: GTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR TCA 90 bp | CCTTTAAAAGTAGAGGGCACTATGAAGGACAGACAAGTATCAAGATaGAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: PLKVEGTMKDRQVSR*SPVMRAYTQCSISE Trigger: CTCAGAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTGTCCTTCATAGTGCCCTCTACTTTTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR CCA 90 bp | ATTAGAAATAAAGAGAAGTGTCTTAGTTCTGGAATAGCACATCAATaGAGCCTGTTGGAAACCCAGATCATTGTCAACCATCTCTCTAAT | + |
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Preference number: 1 (lower is better) Translates to: IRNKEKCLSSGIAHQ*SLLETQIIVNHLSN Trigger: ATTAGAGAGATGGTTGACAATGATCTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCCAGAACTAAGACACTTCTCTTTATTTCTAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACAGACAAGTATCAAGATaGAGTCCAGTAATGAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: PHRRDLSTISLRNISNGDRQVSR*SPVMRA Trigger: CGCCCTCATTACTGGACTTCATCTTGATACTTGTCT...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACACAAGTCCTTTCACTTaGAGCTCTCCTTTTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PHRRDLSTISLRNISNGDTSPFT*SSPFLW Trigger: CCACAGAAAAGGAGAGCTCCAAGTGAAAGGACTTGT...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTAGGCTCTGGCAATGTTaGGCAGCACCAGGCTTTTTG | + |
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Preference number: 2 (lower is better) Translates to: SPFTWSSPFLWGILKSTLRLWQC*AAPGFL Trigger: CAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCT...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR GCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACCAGCACCAGGCTTTTTaGCTTTCAAATCGGACTTTT | + |
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Preference number: 2 (lower is better) Translates to: PHRRDLSTISLRNISNGDQHQAF*LSNRTF Trigger: AAAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTG...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR CCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCGGAATAGCACATCAATaGAGCCTGTTGGAAACCCAG | + |
|
Preference number: 2 (lower is better) Translates to: RILSAVFLRNNNADTKPSGIAHQ*SLLETQ Trigger: CTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCC...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR CAA 90 bp | AGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACACTaGCTATTATACAAGTCCTTTCACTTGGAGCTCTCCTTTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: RPFHHQSQKHKQWRH*LLYKSFHLELSFSV Trigger: CACAGAAAAGGAGAGCTCCAAGTGAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR TCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCATACTGTACCCTCTTTaGATAGTAACTCAAAAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: RILSAVFLRNNNADTKPSILYPL*IVTQKH Trigger: GTGCTTTTGAGTTACTATTCAAAGAGGGTACAGTAT...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATAATGGAACAACCATATaGTTGTTGCCAGTCCTGAGT | + |
|
Preference number: 2 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYNGTTI*LLPVLS Trigger: ACTCAGGACTGGCAACAACCATATGGTTGTTCCATT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTTCAGGGCATACTTTaGGTCTTCAGGAAGAACCAT | + |
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Preference number: 2 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYFQGIL*VFRKNH Trigger: ATGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAA...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGAATGGAACAACCATATaGTTGTTGCCAGTCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMNGTTI*LLPVLS Trigger: ACTCAGGACTGGCAACAACCATATGGTTGTTCCATT...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATAGCTCTCCTTTTCTGTaGGGTATACTTAAGAGTACA | + |
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Preference number: 2 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYSSPFL*GILKST Trigger: TGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTACAAGTCCTTTCACTTaGAGCTCTCCTTTTCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: RNNNADTKPSTFSLQLFCTSPFT*SSPFLW Trigger: CCACAGAAAAGGAGAGCTCCAAGTGAAAGGACTTGT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR CAA 90 bp | AAAGAGAAGTGTCTTAGTTCTGGAATAGCACATCAATGGAGCCTGTaGGAAACCCAGATCATTGTCAACCATCTCTCTAATTTCATCAAC | + |
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Preference number: 2 (lower is better) Translates to: KEKCLSSGIAHQWSL*ETQIIVNHLSNFIN Trigger: GTTGATGAAATTAGAGAGATGGTTGACAATGATCTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCCAGAACTAAGACACTTCTCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTATACTGTACCCTCTTTaGATAGTAACTCAAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: SPFTWSSPFLWGILKSTLILYPL*IVTQKH Trigger: GTGCTTTTGAGTTACTATTCAAAGAGGGTACAGTAT...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTCAGTGCAGTATTTCTaGGGAATAACAACGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFSVQYF*GITTQI Trigger: TATCTGCGTTGTTATTCCTCAGAAATACTGCACTGA...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATAGCAATGGAGACACTTaGTATTATACAAGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYSNGDT*YYTSPF Trigger: GAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTAAATGGAACAACCATATaGTTGTTGCCAGTCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: FLRNNNADTKPSTFSLQLNGTTI*LLPVLS Trigger: ACTCAGGACTGGCAACAACCATATGGTTGTTCCATT...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAAAATGGAACAACCATATaGTTGTTGCCAGTCCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: GALLFCGVYLRVHFSNFKNGTTI*LLPVLS Trigger: ACTCAGGACTGGCAACAACCATATGGTTGTTCCATT...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTACCAAAGAAACTCCCTaGAAGGGTACAAACATTCAA | + |
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Preference number: 2 (lower is better) Translates to: RNNNADTKPSTFSLQLFCTKETP*KGTNIQ Trigger: TTGAATGTTTGTACCCTTTCAGGGAGTTTCTTTGGT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025142.13 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCAGAAACATAAGCAATaGAGACACTTGCTATTATAC | + |
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Preference number: 2 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYQKHKQ*RHLLLY Trigger: GTATAATAGCAAGTGTCTCCATTGCTTATGTTTCTG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTAATACTGTACCCTCTTTaGATAGTAACTCAAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: FLRNNNADTKPSTFSLQLILYPL*IVTQKH Trigger: GTGCTTTTGAGTTACTATTCAAAGAGGGTACAGTAT...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTATACTGTACCCTCTTTaGATAGTAACTCAAAAGCAC | + |
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Preference number: 2 (lower is better) Translates to: RNNNADTKPSTFSLQLFCILYPL*IVTQKH Trigger: GTGCTTTTGAGTTACTATTCAAAGAGGGTACAGTAT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTAAGCAATGGAGACACTTaGTATTATACAAGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: FLRNNNADTKPSTFSLQLSNGDT*YYTSPF Trigger: GAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCT...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTAGCAATGGAGACACTTaGTATTATACAAGTCCTTTC | + |
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Preference number: 2 (lower is better) Translates to: RNNNADTKPSTFSLQLFCSNGDT*YYTSPF Trigger: GAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CAA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACACAACCATATGGTTGTaGCCAGTCCTGAGTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: PHRRDLSTISLRNISNGDTTIWL*PVLSSF Trigger: AAATGAACTCAGGACTGGCAACAACCATATGGTTGT...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CAA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTTTTCAGGGCATACTTaGGGTCTTCAGGAAGAACCA | + |
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Preference number: 3 (lower is better) Translates to: RILSAVFLRNNNADTKPSFSGHT*GLQEEP Trigger: TGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAAA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR TCA 72 bp | TCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTaGGGAATAACAACGCAGATACCAAGCCGTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: SSNEGVYSVQYF*GITTQIPSRPH Trigger: ATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACGCCCTCATTACTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR TCA 72 bp | GTAGAGGGCACTATGAAGGACAGACAAGTATCAAGATaGAGTCCAGTAATGAGGGCGTATACTCAGTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: VEGTMKDRQVSR*SPVMRAYTQCS Trigger: ACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTGTCCTTCATAGTGCCCTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTACAGGCTCTGGCAATGTaGAGCAGCACCAGGCTTTTT | + |
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Preference number: 3 (lower is better) Translates to: FLRNNNADTKPSTFSLQLQALAM*SSTRLF Trigger: AAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTG...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTACAACCATATGGTTGTaGCCAGTCCTGAGTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: SPFTWSSPFLWGILKSTLTTIWL*PVLSSF Trigger: AAATGAACTCAGGACTGGCAACAACCATATGGTTGT...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAAGCAGCACCAGGCTTTTaGCCTTTCAAATCGGACTTT | + |
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Preference number: 3 (lower is better) Translates to: GALLFCGVYLRVHFSNFKAAPGF*PFKSDF Trigger: AAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTGC...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR GCA 72 bp | ACCATCAGTCTCAGAAACATAAGCAATGGAGACACTTaGTATTATACAAGTCCTTTCACTTGGAGCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TISLRNISNGDT*YYTSPFTWSSP Trigger: AGGAGAGCTCCAAGTGAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCTTATGTTTCTGAGACTGATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR CCA 72 bp | AAAGAGAAGTGTCTTAGTTCTGGAATAGCACATCAATaGAGCCTGTTGGAAACCCAGATCATTGTCAACCAT | + |
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Preference number: 3 (lower is better) Translates to: KEKCLSSGIAHQ*SLLETQIIVNH Trigger: ATGGTTGACAATGATCTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCCAGAACTAAGACACTTCTCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR CAA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCACAACCATATGGTTGTaGCCAGTCCTGAGTTCATTT | + |
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Preference number: 3 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFTTIWL*PVLSSF Trigger: AAATGAACTCAGGACTGGCAACAACCATATGGTTGT...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATACAAGTCCTTTCACTaGGAGCTCTCCTTTTCTGTG | + |
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Preference number: 3 (lower is better) Translates to: FLRNNNADTKPSTFSLQLYKSFH*ELSFSV Trigger: CACAGAAAAGGAGAGCTCCAAGTGAAAGGACTTGTA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
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| 3UTR-3UTR CAA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTGGAAACCCAGATCATaGTCAACCATCTCTCTAATT | + |
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Preference number: 3 (lower is better) Translates to: SPFTWSSPFLWGILKSTLWKPRS*STISLI Trigger: AATTAGAGAGATGGTTGACAATGATCTGGGTTTCCA...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| 3UTR-3UTR CAA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTACAACCATATGGTTGTaGCCAGTCCTGAGTTCATTT | + |
|
Preference number: 3 (lower is better) Translates to: RNNNADTKPSTFSLQLFCTTIWL*PVLSSF Trigger: AAATGAACTCAGGACTGGCAACAACCATATGGTTGT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| 3UTR CCA 72 bp | AGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATaGAGACACTTGCTATTATACAAGTCCTTTCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: RPFHHQSQKHKQ*RHLLLYKSFHL Trigger: CAAGTGAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTAAGCAATGGAGACACTaGCTATTATACAAGTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: RNNNADTKPSTFSLQLFCKQWRH*LLYKSF Trigger: AAAGGACTTGTATAATAGCAAGTGTCTCCATTGCTT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| 3UTR CCA 72 bp | CTCTCTAATTTCATCAACCTTTTTCAGGGCATACTTTaGGTCTTCAGGAAGAACCATTATTATTCTACCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSNFINLFQGIL*VFRKNHYYSTI Trigger: GATGGTAGAATAATAATGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAAAAGGTTGATGAAATTAGAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACAGGCTCTGGCAATGTTaGGCAGCACCAGGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDRLWQC*AAPGFL Trigger: CAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCT...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACCTGCTGATTAGGAGCTaGACCTGGAAATGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDLLIRS*TWKCSV Trigger: GACAGAACATTTCCAGGTTCAGCTCCTAATCAGCAG...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACGACCCTTGGTTGCACTaGGAACTACAAGTAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDDPWLH*ELQVEV Trigger: AACTTCTACTTGTAGTTCTCAGTGCAACCAAGGGTC...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACTTGCTCTTTCCAGCTTaGTCCAATTCCTGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDLLFPA*SNSWSS Trigger: TGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAA...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTTGACTGAGAAGAGTTaGGGCAGCAGCAGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSLTEKS*GSSSVF Trigger: GAAAACACTGCTGCTGCCTCAACTCTTCTCAGTCAA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACTTGTGGAAAAGCAGGTaGTGTGTTTCATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDLWKSR*CVSSSG Trigger: TCCAGAAGATGAAACACAGCACCTGCTTTTCCACAA...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACTTTCAGGGCATACTTTaGGTCTTCAGGAAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDFQGIL*VFRKNH Trigger: ATGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAA...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTGTGTCCTGCATCTATaGCCAGCTGTTTTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSCVLHL*PAVFHP Trigger: TGGATGAAAAACAGCTGGTCATAGATGCAGGACACA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGAGGCTCTGGCAATGTTaGGCAGCACCAGGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMRLWQC*AAPGFL Trigger: CAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCT...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR GCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACGTACACTCTGTTAACTaGTGTAGTCTTTGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDVHSVN*CSLCDL Trigger: CAGATCACAAAGACTACAGCAGTTAACAGAGTGTAC...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATAGTGGCAGTGGGATTTaGGGGCGTTTTGTGCTAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYSGSGI*GRFVLV Trigger: TACTAGCACAAAACGCCCCCAAATCCCACTGCCACT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCTTTGTGATCTGCGGTaGAGCTGTTCATTCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLCDLR*SCSFPF Trigger: GAAAGGGAATGAACAGCTTCACCGCAGATCACAAAG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACTGGTTGGCTTCTTTATaGTGGAGTATTTGTCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PHRRDLSTISLRNISNGDWLASL*WSICLS Trigger: TGAAAGACAAATACTCCATCATAAAGAAGCCAACCA...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTGACTGAGAAGAGTTaGGGCAGCAGCAGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLTEKS*GSSSVF Trigger: GAAAACACTGCTGCTGCCTCAACTCTTCTCAGTCAA...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCTGCTGATTAGGAGCTaGACCTGGAAATGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLLIRS*TWKCSV Trigger: GACAGAACATTTCCAGGTTCAGCTCCTAATCAGCAG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTAAGGCTCTGGCAATGTTaGGCAGCACCAGGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FLRNNNADTKPSTFSLQLRLWQC*AAPGFL Trigger: CAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCT...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTAGGCTCTGGCAATGTTaGGCAGCACCAGGCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCRLWQC*AAPGFL Trigger: CAAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCAGTACACTGTGCTGCTaGTTAGGAGCTGAACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFSTLCC*LGAEPV Trigger: GACAGGTTCAGCTCCTAATCAGCAGCACAGTGTACT...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115864.8 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTGATCCACACTCGTGGTaGTTAATGAGCAGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLDPHSW*LMSRTT Trigger: TGTGGTTCTGCTCATTAATCACCACGAGTGTGGATC...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTTGTGGAAAAGCAGGTaGTGTGTTTCATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSLWKSR*CVSSSG Trigger: TCCAGAAGATGAAACACAGCACCTGCTTTTCCACAA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTCTTTACAGCTTCCTTaGAGCCTGACTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSSLQLP*SLTSLL Trigger: CAACAAAGAAGTCAGGCTCCAAGGAAGCTGTAAAGA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATGGAATAGCACATCAATaGAGCCTGTTGGAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYGIAHQ*SLLETQ Trigger: CTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCC...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCATTCTGATCTGGTGCTaGCTCACAAGAAAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSILIWC*LTRKFH Trigger: ATGAAACTTTCTTGTGAGTCAGCACCAGATCAGAAT...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTTGACTGAGAAGAGTTaGGGCAGCAGCAGTGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFLTEKS*GSSSVF Trigger: GAAAACACTGCTGCTGCCTCAACTCTTCTCAGTCAA...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTTCATCTTCTGGATTTaGAGCTGTATAGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSFIFWI*SCIEHS Trigger: GGAATGCTCTATACAGCTTCAAATCCAGAAGATGAA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCGTACACTCTGTTAACTaGTGTAGTCTTTGTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSVHSVN*CSLCDL Trigger: CAGATCACAAAGACTACAGCAGTTAACAGAGTGTAC...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATGAATGCTACCTCTTTTaGTCTTTCCAGCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYECYLF*SFQLAP Trigger: TGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTC...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTGCAGTTTTACCTCTaGAGGCTTCTCCTCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLQFYL*RLLLLY Trigger: GTAAAGGAGGAGAAGCCTGCAGAGGTAAAACTGCAA...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTTGCAGTTTTACCTCTaGAGGCTTCTCCTCCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLLQFYL*RLLLLY Trigger: GTAAAGGAGGAGAAGCCTGCAGAGGTAAAACTGCAA...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGGGAATAGCACATCAATaGAGCCTGTTGGAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMGIAHQ*SLLETQ Trigger: CTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCC...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCGGAATAGCACATCAATaGAGCCTGTTGGAAACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFGIAHQ*SLLETQ Trigger: CTGGGTTTCCAACAGGCTCCATTGATGTGCTATTCC...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| 3UTR CAA 72 bp | CACCATCAGTCTCAGAAACATAAGCAATGGAGACACTaGCTATTATACAAGTCCTTTCACTTGGAGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HHQSQKHKQWRH*LLYKSFHLELS Trigger: GGAGAGCTCCAAGTGAAAGGACTTGTATAATAGCAAGTGTCTCCATTGCTTATGTTTCTGAGACTGATGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTACCTCTACAGTATCTaGTTCAATTTCACCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RILSAVFLRNNNADTKPSYLYSI*FNFTSN Trigger: ATTGCTGGTGAAATTGAATCAGATACTGTAGAGGTA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTCTTTGGGACACTGGATaGGGCATTTCTAAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLLWDTG*GISKTD Trigger: ATCAGTTTTAGAAATGCCTCATCCAGTGTCCCAAAG...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATATGCTGAACATATGCTaGAATTCTGATCTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYMLNIC*NSDLVL Trigger: CAGCACCAGATCAGAATTTCAGCATATGTTCAGCAT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTCTGCTGATTAGGAGCTaGACCTGGAAATGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCLLIRS*TWKCSV Trigger: GACAGAACATTTCCAGGTTCAGCTCCTAATCAGCAG...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGTGTGTCCTGCATCTATaGCCAGCTGTTTTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMCVLHL*PAVFHP Trigger: TGGATGAAAAACAGCTGGTCATAGATGCAGGACACA...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCTCCACCTCAGATGCTaGACATATGCTGAAATTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLHLRC*TYAEIS Trigger: ACTAATTTCAGCATATGTTCAGCATCTGAGGTGGAG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097670.10 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGGTAGTCTTTGTGATCTaGGGTGAAGCTGTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMVVFVI*GEAVHS Trigger: GGAATGAACAGCTTCACCGCAGATCACAAAGACTAC...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTGTGGAAAAGCAGGTaGTGTGTTTCATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLWKSR*CVSSSG Trigger: TCCAGAAGATGAAACACAGCACCTGCTTTTCCACAA...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR GCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCAGCACCAGGCTTTTTaGCTTTCAAATCGGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYQHQAF*LSNRTF Trigger: AAAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTTTCAGGGCATACTTTaGGTCTTCAGGAAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLFQGIL*VFRKNH Trigger: ATGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAA...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATATCAATGGAGCCTGTTaGAAACCCAGATCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYINGAC*KPRSLS Trigger: TGACAATGATCTGGGTTTCCAACAGGCTCCATTGAT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTACTTCATTTGTAACTaGATGCCTGTCCTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYYFICN*MPVLLT Trigger: TGTAAGGAGGACAGGCATTCAGTTACAAATGAAGTA...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAAGACCCTTGGTTGCACTaGGAACTACAAGTAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKDPWLH*ELQVEV Trigger: AACTTCTACTTGTAGTTCTCAGTGCAACCAAGGGTC...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTCTCCACCTCAGATGCTaGACATATGCTGAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCLHLRC*TYAEIL Trigger: CAGAATTTCAGCATATGTTCAGCATCTGAGGTGGAG...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAACTCCACCTCAGATGCTaGACATATGCTGAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKLHLRC*TYAEIL Trigger: CAGAATTTCAGCATATGTTCAGCATCTGAGGTGGAG...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTCATCAATCTTAGCTTaGCTGAGAAGAGTTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFSSILA*LRRVEA Trigger: TGCCTCAACTCTTCTCAGTCAAGCTAAGATTGATGA...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATGTGTCCTGCATCTATaGCCAGCTGTTTTTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKCVLHL*PAVFHP Trigger: TGGATGAAAAACAGCTGGTCATAGATGCAGGACACA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTTCATCTTCTGGATTTaGAGCTGTATAGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLFIFWI*SCIEHS Trigger: GGAATGCTCTATACAGCTTCAAATCCAGAAGATGAA...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTACATGAATCTCTCTACTaGGCAAAGACCTGGTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRNNNADTKPSTFSLQLHESLY*AKTWLY Trigger: GTACAACCAGGTCTTTGCGCAGTAGAGAGATTCATG...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTGCTCTTTCCAGCTTaGTCCAATTCCTGGTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: FLRNNNADTKPSTFSLQLLLFPA*SNSWSS Trigger: TGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTGAATGCTACCTCTTTTaGTCTTTCCAGCTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCECYLF*SFQLAP Trigger: TGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTC...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGCACAGAGTTGGAGAATaGTACCTCTTTTGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMHRVGE*YLFCSF Trigger: GAAAGAGCAAAAGAGGTAGCATTCTCCAACTCTGTG...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTCTTATAAACTGGTTGTaGAAAAGCAGGTGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLLINWL*KSRCCV Trigger: AACACAGCACCTGCTTTTCCACAACCAGTTTATAAG...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCTTATAAACTGGTTGTaGAAAAGCAGGTGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYLINWL*KSRCCV Trigger: AACACAGCACCTGCTTTTCCACAACCAGTTTATAAG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGATCAATGGAGCCTGTTaGAAACCCAGATCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMINGAC*KPRSLS Trigger: TGACAATGATCTGGGTTTCCAACAGGCTCCATTGAT...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTTGTTCTCTTCTTGCTaGTTGCTGATTCTGTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLLFSSC*LLILFN Trigger: GTTAAACAGAATCAGCAATCAGCAAGAAGAGAACAA...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGTACTTCATTTGTAACTaGATGCCTGTCCTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMYFICN*MPVLLT Trigger: TGTAAGGAGGACAGGCATTCAGTTACAAATGAAGTA...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTGTACTCACTTGTGTATaGGCTGATTTCCTCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCVLTCV*ADFLSS Trigger: TGAACTGAGGAAATCAGCTCATACACAAGTGAGTAC...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAACTTTGGGACACTGGATaGGGCATTTCTAAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKLWDTG*GISKTD Trigger: ATCAGTTTTAGAAATGCCTCATCCAGTGTCCCAAAG...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGATTCTGATCTGGTGCTaGCTCACAAGAAAGTTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMILIWC*LTRKFH Trigger: ATGAAACTTTCTTGTGAGTCAGCACCAGATCAGAAT...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTATGCTGAACATATGCTaGAATTCTGATCTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCMLNIC*NSDLVL Trigger: CAGCACCAGATCAGAATTTCAGCATATGTTCAGCAT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTTCATCAATCTTAGCTTaGCTGAGAAGAGTTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCSSILA*LRRVEA Trigger: TGCCTCAACTCTTCTCAGTCAAGCTAAGATTGATGA...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAACACAGAGTTGGAGAATaGTACCTCTTTTGCTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKHRVGE*YLFCSF Trigger: GAAAGAGCAAAAGAGGTAGCATTCTCCAACTCTGTG...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATTGTGGAAAAGCAGGTaGTGTGTTTCATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKLWKSR*CVSSSG Trigger: TCCAGAAGATGAAACACAGCACCTGCTTTTCCACAA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR GCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTCAGCACCAGGCTTTTTaGCTTTCAAATCGGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCQHQAF*LSNRTF Trigger: AAAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTG...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAACAGCACCAGGCTTTTTaGCTTTCAAATCGGACTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKQHQAF*LSNRTF Trigger: AAAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTG...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATCTTTACAGCTTCCTTaGAGCCTGACTTCTTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKSLQLP*SLTSLL Trigger: CAACAAAGAAGTCAGGCTCCAAGGAAGCTGTAAAGA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTGTTGGAAAATCTAACTaGTGTCTTTACAGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPFTWSSPFLWGILKSTLVGKSN*CLYSFL Trigger: AAGGAAGCTGTAAAGACACCAGTTAGATTTTCCAAC...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGCTTATAAACTGGTTGTaGAAAAGCAGGTGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMLINWL*KSRCCV Trigger: AACACAGCACCTGCTTTTCCACAACCAGTTTATAAG...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTTTTCAGGGCATACTTTaGGTCTTCAGGAAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCFQGIL*VFRKNH Trigger: ATGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAA...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATTTCAGGGCATACTTTaGGTCTTCAGGAAGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GALLFCGVYLRVHFSNFKFQGIL*VFRKNH Trigger: ATGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTATCAATGGAGCCTGTTaGAAACCCAGATCATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCINGAC*KPRSLS Trigger: TGACAATGATCTGGGTTTCCAACAGGCTCCATTGAT...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGGTCTTCAGGAAGAACCATTATTATTCTACCATCAGGATATTCAGCAGTACTCACTTGTGTATaGGCTGATTTCCTCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YFGSSGRTIIILPSGYSAVLTCV*ADFLSS Trigger: TGAACTGAGGAAATCAGCTCATACACAAGTGAGTAC...TGCTGAATATCCTGATGGTAGAATAATAATGGTTCTTCCTGAAGACCCAAAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTTTCATCTTCTGGATTTaGAGCTGTATAGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCFIFWI*SCIEHS Trigger: GGAATGCTCTATACAGCTTCAAATCCAGAAGATGAA...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCATCTTCTGGATTTaGAGCTGTATAGAGCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLRNNNADTKPSTFSLQLFIFWI*SCIEHS Trigger: GGAATGCTCTATACAGCTTCAAATCCAGAAGATGAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGAACCATTATTATTCTACCATCAGGATATTCAGCAAGAATTCTTTCCTGTAGTCTTTGTGATCTaGGGTGAAGCTGTTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QEEPLLFYHQDIQQEFFPVVFVI*GEAVHS Trigger: GGAATGAACAGCTTCACCGCAGATCACAAAGACTAC...AGGAAAGAATTCTTGCTGAATATCCTGATGGTAGAATAATAATGGTTCTTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGTCATTTGTAACTGAATaGCTGTCCTCCTTACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMSFVTE*LSSLQS Trigger: TGATTGTAAGGAGGACAGGCATTCAGTTACAAATGA...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCGTTGGAAAATCTAACTaGTGTCTTTACAGCTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFVGKSN*CLYSFL Trigger: AAGGAAGCTGTAAAGACACCAGTTAGATTTTCCAAC...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTACTTATAAACTGGTTGTaGAAAAGCAGGTGCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLRNNNADTKPSTFSLQLLINWL*KSRCCV Trigger: AACACAGCACCTGCTTTTCCACAACCAGTTTATAAG...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR TCA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTGTTCTCTTCTTGCTaGTTGCTGATTCTGTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FLRNNNADTKPSTFSLQLLFSSC*LLILFN Trigger: GTTAAACAGAATCAGCAATCAGCAAGAAGAGAACAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CCA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTTTTCTACTAGTCTTCTaGAGACATTTTTCAGACCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNNNADTKPSTFSLQLFCFLLVF*RHFSDP Trigger: AGGGTCTGAAAAATGTCTCCAGAAGACTAGTAGAAA...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR TCA 90 bp | TACTTTGGGTCTTCAGGAAGAACCATTATTATTCTACCATCAGGATATTCAGCATACCTCTACAGTATCTaGTTCAATTTCACCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YFGSSGRTIIILPSGYSAYLYSI*FNFTSN Trigger: ATTGCTGGTGAAATTGAATCAGATACTGTAGAGGTA...TGCTGAATATCCTGATGGTAGAATAATAATGGTTCTTCCTGAAGACCCAAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS CCA 90 bp | TGGAGAATGCTACCTCTTTTGCTCTTTCCAGCTTGCTCCAATTCCTaGTCATCACTGTGTTCAGGCACTAGTGGCAGTGGGATTTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRMLPLLLFPACSNS*SSLCSGTSGSGIWG Trigger: CCCCCAAATCCCACTGCCACTAGTGCCTGAACACAGTGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACTGCGCAAAGACCTGGTaGTACACTCTGTTAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PHRRDLSTISLRNISNGDCAKTW*YTLLTA Trigger: AGCAGTTAACAGAGTGTACAACCAGGTCTTTGCGCA...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | CCCCACAGGAGAGACCTTTCCACCATCAGTCTCAGAAACATAAGCAATGGAGACCGCATTTCACAGGCTTaGTTTTCCTACTGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PHRRDLSTISLRNISNGDRISQA*FSYWER Trigger: TCTTTCCCAGTAGGAAAACAAAGCCTGTGAAATGCG...GTCTCCATTGCTTATGTTTCTGAGACTGATGGTGGAAAGGTCTCTCCTGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS TCA 90 bp | CTGGGAAAGAACCGATTAGAGCGCACATCCTGGTTGGCTTCTTTATaGTGGAGTATTTGTCTTTCAGCATCGGTCCCTTGCAGTTTTACC | + |
|
Preference number: 5 (lower is better) Translates to: LGKNRLERTSWLASL*WSICLSASVPCSFT Trigger: GGTAAAACTGCAAGGGACCGATGCTGAAAGACAAATACTCCATCATAAAGAAGCCAACCAGGATGTGCGCTCTAATCGGTTCTTTCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTGGAGCCTGACTTCTTaGTTGGACTGTTCTGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RILSAVFLRNNNADTKPSWSLTS*LDCSEN Trigger: GTTCTCAGAACAGTCCAACAAAGAAGTCAGGCTCCA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RILSAVFLRNNNADTKPSALINW*WKSRCC Trigger: ACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGC...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTCAGGCTCTGGCAATGTaGAGCAGCACCAGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SPFTWSSPFLWGILKSTLQALAM*SSTRLF Trigger: AAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTG...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATCAGGCTCTGGCAATGTaGAGCAGCACCAGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYQALAM*SSTRLF Trigger: AAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTG...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCCAGGCTCTGGCAATGTaGAGCAGCACCAGGCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFQALAM*SSTRLF Trigger: AAAAAGCCTGGTGCTGCTCAACATTGCCAGAGCCTG...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS GCA 90 bp | TTTCACCAGCAATTTCTTCACAGAGTTGGAGAATGCTACCTCTTTTaGTCTTTCCAGCTTGCTCCAATTCCTGGTCATCACTGTGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FHQQFLHRVGECYLF*SFQLAPIPGHHCVQ Trigger: CTGAACACAGTGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCTCCAACTCTGTGAAGAAATTGCTGGTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATAGAATGCTACCTCTTTaGCTCTTTCCAGCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYRMLPL*LFPACS Trigger: GGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCT...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYALINW*WKSRCC Trigger: ACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGC...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | CAGACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATGCAGCACCAGGCTTTTaGCCTTTCAAATCGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: QTSIKMKSSNEGVYSVQYAAPGF*PFKSDF Trigger: AAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTGC...ATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGTTTGCTCTTTCCAGCTaGCTCCAATTCCTGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMFALSS*LQFLVI Trigger: GATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAA...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFALINW*WKSRCC Trigger: ACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGC...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | CGTATACTCAGTGCAGTATTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCTGGAAACCCAGATCATaGTCAACCATCTCTCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: RILSAVFLRNNNADTKPSWKPRS*STISLI Trigger: AATTAGAGAGATGGTTGACAATGATCTGGGTTTCCA...GGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAATACTGCACTGAGTATACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGGGGAAGGAGGCTACGTaGTGTGTATCTGAAGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMGKEAT*CVSEVR Trigger: TCTAACTTCAGATACACACAACGTAGCCTCCTTCCC...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS TCA 90 bp | TTAGGAGCTGAACCTGGAAATGTTCTGTCCTCATCAATCTTAGCTTaGCTGAGAAGAGTTGAGGCAGCAGCAGTGTTTTCTAATGGATTA | + |
|
Preference number: 5 (lower is better) Translates to: LGAEPGNVLSSSILA*LRRVEAAAVFSNGL Trigger: TAATCCATTAGAAAACACTGCTGCTGCCTCAACTCTTCTCAGTCAAGCTAAGATTGATGAGGACAGAACATTTCCAGGTTCAGCTCCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
||
| CDS CCA 90 bp | TGTTATCTCCAAATGAGAATCATGCTTCAGCTGAGAATGGTTTGGTaGTACATCCCTGTTCTTTCTGTTGATAGACGCTTCATCACTGAG | + |
|
Preference number: 5 (lower is better) Translates to: CYLQMRIMLQLRMVW*YIPVLSVDRRFITE Trigger: CTCAGTGATGAAGCGTCTATCAACAGAAAGAACAGGGATGTACCACCAAACCATTCTCAGCTGAAGCATGATTCTCATTTGGAGATAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS CCA 90 bp | TCCTTTTTCCAGCCCACATACTTTACAGCGCTTATAAACTGGTTGTaGAAAAGCAGGTGCTGTGTTTCATCTTCTGGATTTGAAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SFFQPTYFTALINWL*KSRCCVSSSGFEAV Trigger: TACAGCTTCAAATCCAGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGGCTGGAAAAAGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATGGAGCCTGACTTCTTaGTTGGACTGTTCTGAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: GALLFCGVYLRVHFSNFKWSLTS*LDCSEN Trigger: GTTCTCAGAACAGTCCAACAAAGAAGTCAGGCTCCA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTTGCTCTTTCCAGCTaGCTCCAATTCCTGGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: FLRNNNADTKPSTFSLQLFALSS*LQFLVI Trigger: GATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAAGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GALLFCGVYLRVHFSNFKALINW*WKSRCC Trigger: ACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGC...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTAGCAGCACCAGGCTTTTaGCCTTTCAAATCGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLRNNNADTKPSTFSLQLAAPGF*PFKSDF Trigger: AAAGTCCGATTTGAAAGGCAAAAAGCCTGGTGCTGC...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTAGTCTTTACAGCTTCCTaGGAGCCTGACTTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLRNNNADTKPSTFSLQLVFTAS*EPDFFV Trigger: AACAAAGAAGTCAGGCTCCAAGGAAGCTGTAAAGAC...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAAGTCTTTACAGCTTCCTaGGAGCCTGACTTCTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GALLFCGVYLRVHFSNFKVFTAS*EPDFFV Trigger: AACAAAGAAGTCAGGCTCCAAGGAAGCTGTAAAGAC...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | TACTTTGGGTCTTCAGGAAGAACCATTATTATTCTACCATCAGGATATTCAGCAAGAATGCTACCTCTTTaGCTCTTTCCAGCTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YFGSSGRTIIILPSGYSARMLPL*LFPACS Trigger: GGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCT...TGCTGAATATCCTGATGGTAGAATAATAATGGTTCTTCCTGAAGACCCAAAGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | AGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTCTGTTTTTCAGGGCATACTTaGGGTCTTCAGGAAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: RNNNADTKPSTFSLQLFCFSGHT*GLQEEP Trigger: TGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAAA...ACAGAATAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTTTCAGGGCATACTTaGGGTCTTCAGGAAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: FLRNNNADTKPSTFSLQLFSGHT*GLQEEP Trigger: TGGTTCTTCCTGAAGACCCAAAGTATGCCCTGAAAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS CCA 90 bp | ATTCTTTCCTTTTTCCAGCCCACATACTTTACAGCGCTTATAAACTaGTTGTGGAAAAGCAGGTGCTGTGTTTCATCTTCTGGATTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILSFFQPTYFTALIN*LWKSRCCVSSSGFE Trigger: TTCAAATCCAGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGGCTGGAAAAAGGAAAGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS CCA 90 bp | TTAATGAGCAGAACCACATACTTTACAGCGCTTATAAACTGGTTGTaGAAAAGCAGGTGCTGTGTTTCATCTTCTGGATTTGAAGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LMSRTTYFTALINWL*KSRCCVSSSGFEAV Trigger: TACAGCTTCAAATCCAGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGTTCTGCTCATTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | TACTTTGGGTCTTCAGGAAGAACCATTATTATTCTACCATCAGGATATTCAGCACGCATTTCACAGGCTTaGTTTTCCTACTGGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: YFGSSGRTIIILPSGYSARISQA*FSYWER Trigger: TCTTTCCCAGTAGGAAAACAAAGCCTGTGAAATGCG...TGCTGAATATCCTGATGGTAGAATAATAATGGTTCTTCCTGAAGACCCAAAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | AGTCCTTTCACTTGGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTTTCATCTTCTGGATTaGAAGCTGTATAGAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SPFTWSSPFLWGILKSTLFHLLD*KLYRAF Trigger: GAATGCTCTATACAGCTTCAAATCCAGAAGATGAAA...AAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCCAAGTGAAAGGACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTGGAAACCCAGATCATaGTCAACCATCTCTCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFWKPRS*STISLI Trigger: AATTAGAGAGATGGTTGACAATGATCTGGGTTTCCA...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCACAGCAGTTTTTCGACATATAACCCTTTAAAAGTAGAGGGCACTATGTGGAAACCCAGATCATaGTCAACCATCTCTCTAATT | + |
|
Preference number: 5 (lower is better) Translates to: KGHSSFSTYNPLKVEGTMWKPRS*STISLI Trigger: AATTAGAGAGATGGTTGACAATGATCTGGGTTTCCA...CATAGTGCCCTCTACTTTTAAAGGGTTATATGTCGAAAAACTGCTGTGGCCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
||
| CDS TCA 90 bp | GTCTTTACAGCTTCCTTGGAGCCTGACTTCTTTGTTGGACTGTTCTaGGAACTTTCAACTTCTTCTTCTAAATTCTCATCTTCACTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VFTASLEPDFFVGLF*ELSTSSSKFSSSLS Trigger: AGAAAGTGAAGATGAGAATTTAGAAGAAGAAGTTGAAAGTTCTCAGAACAGTCCAACAAAGAAGTCAGGCTCCAAGGAAGCTGTAAAGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
||
| CDS-3UTR CAA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCTTTCATCTTCTGGATTaGAAGCTGTATAGAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFFHLLD*KLYRAF Trigger: GAATGCTCTATACAGCTTCAAATCCAGAAGATGAAA...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS-3UTR CAA 90 bp | ACAAGTATCAAGATGAAGTCCAGTAATGAGGGCGTATACTCAGTGCAGTATTTCCTGAACCTGTCTGCTTaGACAAAATTTCTGAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TSIKMKSSNEGVYSVQYFLNLSA*TKFLKS Trigger: ACTTTTCAGAAATTTTGTCAAAGCAGACAGGTTCAG...GAAATACTGCACTGAGTATACGCCCTCATTACTGGACTTCATCTTGATACTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115864.8 |
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| CDS-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATACATTGTTCTCTTCTaGCTGATTGCTGATTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: GALLFCGVYLRVHFSNFKYIVLF*LIADSV Trigger: AACAGAATCAGCAATCAGCAAGAAGAGAACAATGTA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTGCGCTTCTTTCCTTaGGGAGAATTTATTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: FLRNNNADTKPSTFSLQLLRFFP*GEFITS Trigger: TGAAGTAATAAATTCTCCCAAAGGAAAGAAGCGCAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATTGCGCTTCTTTCCTTaGGGAGAATTTATTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: GALLFCGVYLRVHFSNFKLRFFP*GEFITS Trigger: TGAAGTAATAAATTCTCCCAAAGGAAAGAAGCGCAA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS-3UTR CAA 90 bp | TTTCTGAGGAATAACAACGCAGATACCAAGCCGTCCACATTTAGTTTACAACTATTTCATCTTCTGGATTaGAAGCTGTATAGAGCATTC | + |
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Preference number: 5 (lower is better) Translates to: FLRNNNADTKPSTFSLQLFHLLD*KLYRAF Trigger: GAATGCTCTATACAGCTTCAAATCCAGAAGATGAAA...TAGTTGTAAACTAAATGTGGACGGCTTGGTATCTGCGTTGTTATTCCTCAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS-3UTR CAA 90 bp | GGAGCTCTCCTTTTCTGTGGGGTATACTTAAGAGTACACTTTAGTAACTTCAAATTTCATCTTCTGGATTaGAAGCTGTATAGAGCATTC | + |
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Preference number: 5 (lower is better) Translates to: GALLFCGVYLRVHFSNFKFHLLD*KLYRAF Trigger: GAATGCTCTATACAGCTTCAAATCCAGAAGATGAAA...TTTGAAGTTACTAAAGTGTACTCTTAAGTATACCCCACAGAAAAGGAGAGCTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS-3UTR CAA 90 bp | TACTTTGGGTCTTCAGGAAGAACCATTATTATTCTACCATCAGGATATTCAGCATACATTGTTCTCTTCTaGCTGATTGCTGATTCTGTT | + |
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Preference number: 5 (lower is better) Translates to: YFGSSGRTIIILPSGYSAYIVLF*LIADSV Trigger: AACAGAATCAGCAATCAGCAAGAAGAGAACAATGTA...TGCTGAATATCCTGATGGTAGAATAATAATGGTTCTTCCTGAAGACCCAAAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| CDS CCA 72 bp | CTACCTCTTTTGCTCTTTCCAGCTTGCTCCAATTCCTaGTCATCACTGTGTTCAGGCACTAGTGGCAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: LPLLLFPACSNS*SSLCSGTSGSG Trigger: CCCACTGCCACTAGTGCCTGAACACAGTGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAAAGAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | GAGTTGGAGAATGCTACCTCTTTTGCTCTTTCCAGCTaGCTCCAATTCCTGGTCATCACTGTGTTCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ELENATSFALSS*LQFLVITVFRH Trigger: GTGCCTGAACACAGTGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCTCCAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS TCA 72 bp | AACCGATTAGAGCGCACATCCTGGTTGGCTTCTTTATaGTGGAGTATTTGTCTTTCAGCATCGGTCCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: NRLERTSWLASL*WSICLSASVPC Trigger: GCAAGGGACCGATGCTGAAAGACAAATACTCCATCATAAAGAAGCCAACCAGGATGTGCGCTCTAATCGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | GCGCACATCCTGGTTGGCTTCTTTATGATGGAGTATTaGTCTTTCAGCATCGGTCCCTTGCAGTTTTACCTC | + |
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Preference number: 6 (lower is better) Translates to: AHILVGFFMMEY*SFSIGPLQFYL Trigger: GAGGTAAAACTGCAAGGGACCGATGCTGAAAGACAAATACTCCATCATAAAGAAGCCAACCAGGATGTGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 90 bp | GTTGGCTTCTTTATGATGGAGTATTTGTCTTTCAGCATCGGTCCCTaGCAGTTTTACCTCTGCAGGCTTCTCCTCCTTTACACTTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: VGFFMMEYLSFSIGP*QFYLCRLLLLYTFH Trigger: GTGGAAAGTGTAAAGGAGGAGAAGCCTGCAGAGGTAAAACTGCAAGGGACCGATGCTGAAAGACAAATACTCCATCATAAAGAAGCCAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS TCA 72 bp | GAACCTGGAAATGTTCTGTCCTCATCAATCTTAGCTTaGCTGAGAAGAGTTGAGGCAGCAGCAGTGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: EPGNVLSSSILA*LRRVEAAAVFS Trigger: AGAAAACACTGCTGCTGCCTCAACTCTTCTCAGTCAAGCTAAGATTGATGAGGACAGAACATTTCCAGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
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| CDS TCA 72 bp | TTCATCACTGAGTACACTGTGCTGCTGATTAGGAGCTaGACCTGGAAATGTTCTGTCCTCATCAATCTTAGC | + |
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Preference number: 6 (lower is better) Translates to: FITEYTVLLIRS*TWKCSVLINLS Trigger: GCTAAGATTGATGAGGACAGAACATTTCCAGGTTCAGCTCCTAATCAGCAGCACAGTGTACTCAGTGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000127099.9 |
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| CDS CCA 72 bp | CTCCAAATGAGAATCATGCTTCAGCTGAGAATGGTTTaGTGGTACATCCCTGTTCTTTCTGTTGATAGACGC | + |
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Preference number: 6 (lower is better) Translates to: LQMRIMLQLRMV*WYIPVLSVDRR Trigger: GCGTCTATCAACAGAAAGAACAGGGATGTACCACCAAACCATTCTCAGCTGAAGCATGATTCTCATTTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | TTTATGATGGAGTATTTGTCTTTCAGCATCGGTCCCTaGCAGTTTTACCTCTGCAGGCTTCTCCTCCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: FMMEYLSFSIGP*QFYLCRLLLLY Trigger: GTAAAGGAGGAGAAGCCTGCAGAGGTAAAACTGCAAGGGACCGATGCTGAAAGACAAATACTCCATCATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | TTCCAGCCCACATACTTTACAGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGTGTTTCATCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FQPTYFTALINW*WKSRCCVSSSG Trigger: TCCAGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGGCTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
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| CDS CAA 90 bp | CTGTTTGAATTTGACCATGAATCTCTCTACTGCGCAAAGACCTGGTaGTACACTCTGTTAACTGCTGTAGTCTTTGTGATCTGCGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LFEFDHESLYCAKTW*YTLLTAVVFVICGE Trigger: TTCACCGCAGATCACAAAGACTACAGCAGTTAACAGAGTGTACAACCAGGTCTTTGCGCAGTAGAGAGATTCATGGTCAAATTCAAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 90 bp | ATTTCACCAGCAATTTCTTCACAGAGTTGGAGAATGCTACCTCTTTaGCTCTTTCCAGCTTGCTCCAATTCCTGGTCATCACTGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: ISPAISSQSWRMLPL*LFPACSNSWSSLCS Trigger: TGAACACAGTGATGACCAGGAATTGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCTCCAACTCTGTGAAGAAATTGCTGGTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS GCA 72 bp | GATATTACAGGACACTGCTCCAAATCGTTTGTGTCCTaGATCTATGACCAGCTGTTTTTCATCCACTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: DITGHCSKSFVS*IYDQLFFIHFL Trigger: GAGAAAGTGGATGAAAAACAGCTGGTCATAGATGCAGGACACAAACGATTTGGAGCAGTGTCCTGTAATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS CCA 72 bp | CAAATGAGAATCATGCTTCAGCTGAGAATGGTTTGGTaGTACATCCCTGTTCTTTCTGTTGATAGACGCTTC | + |
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Preference number: 6 (lower is better) Translates to: QMRIMLQLRMVW*YIPVLSVDRRF Trigger: GAAGCGTCTATCAACAGAAAGAACAGGGATGTACCACCAAACCATTCTCAGCTGAAGCATGATTCTCATTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | CTGGTGTCTTTACAGCTTCCTTGGAGCCTGACTTCTTaGTTGGACTGTTCTGAGAACTTTCAACTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: LVSLQLPWSLTS*LDCSENFQLLL Trigger: AAGAAGAAGTTGAAAGTTCTCAGAACAGTCCAACAAAGAAGTCAGGCTCCAAGGAAGCTGTAAAGACACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | TTTGACCATGAATCTCTCTACTGCGCAAAGACCTGGTaGTACACTCTGTTAACTGCTGTAGTCTTTGTGATC | + |
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Preference number: 6 (lower is better) Translates to: FDHESLYCAKTW*YTLLTAVVFVI Trigger: GATCACAAAGACTACAGCAGTTAACAGAGTGTACAACCAGGTCTTTGCGCAGTAGAGAGATTCATGGTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | ATTCCACAGATATTACAGGACACTGCTCCAAATCGTTaGTGTCCTGCATCTATGACCAGCTGTTTTTCATCC | + |
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Preference number: 6 (lower is better) Translates to: IPQILQDTAPNR*CPASMTSCFSS Trigger: GGATGAAAAACAGCTGGTCATAGATGCAGGACACAAACGATTTGGAGCAGTGTCCTGTAATATCTGTGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | AGCAGAACCACATACTTTACAGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGTGTTTCATCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SRTTYFTALINW*WKSRCCVSSSG Trigger: TCCAGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGTTCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| CDS CAA 90 bp | CTTTCCTTTTTCCAGCCCACATACTTTACAGCGCTTATAAACTGGTaGTGGAAAAGCAGGTGCTGTGTTTCATCTTCTGGATTTGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LSFFQPTYFTALINW*WKSRCCVSSSGFEA Trigger: AGCTTCAAATCCAGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGGCTGGAAAAAGGAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
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| CDS TCA 72 bp | GAGGTAATAAACTCTTCTTCAGATCCACACTCGTGGTaGTTAATGAGCAGAACCACATACTTTACAGCGCTT | + |
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Preference number: 6 (lower is better) Translates to: EVINSSSDPHSW*LMSRTTYFTAL Trigger: AAGCGCTGTAAAGTATGTGGTTCTGCTCATTAATCACCACGAGTGTGGATCTGAAGAAGAGTTTATTACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| CDS GCA 72 bp | TTGTACACTCTGTTAACTGCTGTAGTCTTTGTGATCTaGGGTGAAGCTGTTCATTCCCTTTCAAGATTCCAA | + |
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Preference number: 6 (lower is better) Translates to: LYTLLTAVVFVI*GEAVHSLSRFQ Trigger: TTGGAATCTTGAAAGGGAATGAACAGCTTCACCGCAGATCACAAAGACTACAGCAGTTAACAGAGTGTACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS GCA 72 bp | CAATTTCACCAGCAATTTCTTCACAGAGTTGGAGAATaGTACCTCTTTTGCTCTTTCCAGCTTGCTCCAATT | + |
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Preference number: 6 (lower is better) Translates to: QFHQQFLHRVGE*YLFCSFQLAPI Trigger: AATTGGAGCAAGCTGGAAAGAGCAAAAGAGGTAGCATTCTCCAACTCTGTGAAGAAATTGCTGGTGAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CCA 72 bp | TTTTTCCAGCCCACATACTTTACAGCGCTTATAAACTaGTTGTGGAAAAGCAGGTGCTGTGTTTCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FFQPTYFTALIN*LWKSRCCVSSS Trigger: AGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGGCTGGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000145320.2 |
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| CDS CCA 72 bp | ATGAGCAGAACCACATACTTTACAGCGCTTATAAACTaGTTGTGGAAAAGCAGGTGCTGTGTTTCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: MSRTTYFTALIN*LWKSRCCVSSS Trigger: AGAAGATGAAACACAGCACCTGCTTTTCCACAACCAGTTTATAAGCGCTGTAAAGTATGTGGTTCTGCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127099.9 |
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| CDS CAA 72 bp | TTTTCTACTAGTCTTCTGGAGACATTTTTCAGACCCTaGGTTGCACTGAGAACTACAAGTAGAAGTTGTCTG | + |
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Preference number: 6 (lower is better) Translates to: FSTSLLETFFRP*VALRTTSRSCL Trigger: CAGACAACTTCTACTTGTAGTTCTCAGTGCAACCAAGGGTCTGAAAAATGTCTCCAGAAGACTAGTAGAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 90 bp | TATTTCTTCTTTTCTACTAGTCTTCTGGAGACATTTTTCAGACCCTaGGTTGCACTGAGAACTACAAGTAGAAGTTGTCTGATGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: YFFFSTSLLETFFRP*VALRTTSRSCLMLY Trigger: GTACAGCATCAGACAACTTCTACTTGTAGTTCTCAGTGCAACCAAGGGTCTGAAAAATGTCTCCAGAAGACTAGTAGAAAAGAAGAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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| CDS CAA 72 bp | CATCCACTTTCTCTGAGTCTTTCAGTTTCAAGGACTTaGGAATTGTTATCTCCAAATGAGAATCATGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: HPLSLSLSVSRT*ELLSPNENHAS Trigger: TGAAGCATGATTCTCATTTGGAGATAACAATTCCAAAGTCCTTGAAACTGAAAGACTCAGAGAAAGTGGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000025142.13 ENSMUST00000097670.10 ENSMUST00000115864.8 ENSMUST00000127099.9 |
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| CDS CCA 72 bp | ACTTCTTCAGATTTAATTCCTTTCATTTTATCCCGTTaGCAAGTTACATTACCATGCGCTTTCATCTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: TSSDLIPFILSR*QVTLPCAFISK Trigger: TTTAGAGATGAAAGCGCATGGTAATGTAACTTGCCAACGGGATAAAATGAAAGGAATTAAATCTGAAGAAGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025142.13 ENSMUST00000127099.9 |
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