Pregenerated sensors for ESAM (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001946Ensembl transcript IDs: ENSMUST00000002011.14, ENSMUST00000123198.2, ENSMUST00000144596.2, ENSMUST00000146860.8, ENSMUST00000214142.2
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTaGAGGGTAGCCGATCTTCCGCAGCATTCATCTGGCTTCAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: TEPGASLTGSLLQSP*RVADLPQHSSGFRE Trigger: CTCCCTGAAGCCAGATGAATGCTGCGGAAGATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR TCA 90 bp | GGAGCAAAGGACTGGAGGTCTAGAATGTGGGCATCCTCCCAAGATTaGGTCCTCTGTGCCACAAGGAGACCTTTACAGAAAGGTCAGATA | + |
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Preference number: 1 (lower is better) Translates to: GAKDWRSRMWASSQD*VLCATRRPLQKGQI Trigger: TATCTGACCTTTCTGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACATTCTAGACCTCCAGTCCTTTGCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR CCA 90 bp | TCTTGGAGATTGTGTCTGTCATCACGTCCAAGGTCACGTTGCACTTaGCAAAGCCCACTCTGTTTTGAGCCTTGCAGACATAGACTCCAG | + |
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Preference number: 1 (lower is better) Translates to: SWRLCLSSRPRSRCT*QSPLCFEPCRHRLQ Trigger: CTGGAGTCTATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGACACAATCTCCAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214142.2 |
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| 3UTR GCA 90 bp | TCCCATTCTTGGAGATTGTGTCTGTCATCACGTCCAAGGTCACGTTaGACTTGGCAAAGCCCACTCTGTTTTGAGCCTTGCAGACATAGA | + |
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Preference number: 1 (lower is better) Translates to: SHSWRLCLSSRPRSR*TWQSPLCFEPCRHR Trigger: TCTATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGACACAATCTCCAAGAATGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214142.2 |
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| 3UTR CCA 90 bp | AAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATaGAGCGAACGGCAAAGGACAGCATTAGATAAGGGTGTTGTACAG | + |
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Preference number: 1 (lower is better) Translates to: KPSQASRTGYINTGR*SERQRTALDKGVVQ Trigger: CTGTACAACACCCTTATCTAATGCTGTCCTTTGCCGTTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCGATGAAGCAGGGAGGAAGTaGAGCCTCCTCACTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: PGASLTGSLLQSPWRVADEAGRK*SLLTPN Trigger: GTTGGGAGTGAGGAGGCTTCACTTCCTCCCTGCTTC...ATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR CAA 90 bp | CACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTaGGAGGGTAGCCGATCTTCCGCAGCATTCATCTGGCTTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HRARGITDWQSPPEP*EGSRSSAAFIWLQG Trigger: TCCCTGAAGCCAGATGAATGCTGCGGAAGATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR-3UTR TCA 90 bp | CCCCCTGCTACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAAGCCAGGGGCATCACTaGCTGGCAGTCTCCTCCAGA | + |
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Preference number: 2 (lower is better) Translates to: PPATTKPSQASRTGYINTSQGHH*LAVSSR Trigger: TCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCT...TGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGTAGCAGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR-3UTR CCA 90 bp | ACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGGTAGGAGCAAAGGACTaGAGGTCTAGAATGTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TTKPSQASRTGYINTGRWVGAKD*RSRMWA Trigger: TGCCCACATTCTAGACCTCCAGTCCTTTGCTCCTAC...CCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR-3UTR GCA 90 bp | CTTTTGTCCTTTGACCCAGATTTTAGTCTTACTGAGGCCCAGTATTCCAACAATAGATTGAGTCCTCTGTaGCACAAGGAGACCTTTACA | + |
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Preference number: 2 (lower is better) Translates to: LLSFDPDFSLTEAQYSNNRLSPL*HKETFT Trigger: TGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCT...ATTGTTGGAATACTGGGCCTCAGTAAGACTAAAATCTGGGTCAAAGGACAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR CCA 72 bp | GGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTaGAGGGTAGCCGATCTTCCGCAGCATTCATCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GASLTGSLLQSP*RVADLPQHSSG Trigger: GCCAGATGAATGCTGCGGAAGATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR CCA 72 bp | TGTTGTACAGATCACAGAGCCAGGGGCATCACTGACTaGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCGA | + |
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Preference number: 3 (lower is better) Translates to: CCTDHRARGITD*QSPPEPLEGSR Trigger: TCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTACAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR-3UTR CAA 90 bp | AGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGAGCGAACGGCAAGGCATCCTCCCAAGATaGAGTCCTCTGTGCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: SQASRTGYINTGRWSERQGILPR*SPLCHK Trigger: CTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCC...TTGCCGTTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR TCA 72 bp | GACTGGAGGTCTAGAATGTGGGCATCCTCCCAAGATTaGGTCCTCTGTGCCACAAGGAGACCTTTACAGAAA | + |
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Preference number: 3 (lower is better) Translates to: DWRSRMWASSQD*VLCATRRPLQK Trigger: TTTCTGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACATTCTAGACCTCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR CCA 72 bp | TTGTGTCTGTCATCACGTCCAAGGTCACGTTGCACTTaGCAAAGCCCACTCTGTTTTGAGCCTTGCAGACAT | + |
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Preference number: 3 (lower is better) Translates to: LCLSSRPRSRCT*QSPLCFEPCRH Trigger: ATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214142.2 |
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| 3UTR CCA 72 bp | CAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATaGAGCGAACGGCAAAGGACAGCATTAGATAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: QASRTGYINTGR*SERQRTALDKG Trigger: ACCCTTATCTAATGCTGTCCTTTGCCGTTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR-3UTR CAA 90 bp | ATCCCCCTGCTACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATATCCTCCTTTTGTCCTTaGACCCAGATTTTAGTCTTA | + |
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Preference number: 3 (lower is better) Translates to: IPLLQQNPAKPAGQVILISSFCP*TQILVL Trigger: TAAGACTAAAATCTGGGTCAAAGGACAAAAGGAGGA...TATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGTAGCAGGGGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | GAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCTGGGGTCAGGGACACTaGCTGAGGTGGGGGTTCATC | + |
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Preference number: 4 (lower is better) Translates to: EPGASLTGSLLQSPWRVAWGQGH*LRWGFI Trigger: GATGAACCCCCACCTCAGGCAGTGTCCCTGACCCCA...GGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | GAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCAGAAGAAACCCCACCTaGGGTCAGGGACACTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: EPGASLTGSLLQSPWRVARRNPT*GQGHCL Trigger: CAGGCAGTGTCCCTGACCCCAGGTGGGGTTTCTTCT...GGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR TCA 90 bp | CCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCGATACGTGCAACTCCATCTaGGCTCGGGAGAAGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: PGASLTGSLLQSPWRVADTCNSI*AREKAA Trigger: TGCTGCCTTCTCCCGAGCTCAGATGGAGTTGCACGT...ATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGGAGGAAGTGAAGCCTCCTCACTCCCAACCCCCTACCTCAGGTCCAGAAGACCTGGGAGGATaGGGCCAGCCTCTCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: RSREEVKPPHSQPPTSGPEDLGG*GQPLPL Trigger: CAGTGGGAGAGGCTGGCCCCATCCTCCCAGGTCTTC...TGGACCTGAGGTAGGGGGTTGGGAGTGAGGAGGCTTCACTTCCTCCCTGCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | AGAAGCAGGGAGGAAGTGAAGCCTCCTCACTCCCAACCCCCTACCTCAGGTCCATTGGAGGAGCAGCCTTaGGTGGCCGCAGAGCTCGTG | + |
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Preference number: 4 (lower is better) Translates to: RSREEVKPPHSQPPTSGPLEEQP*VAAELV Trigger: CACGAGCTCTGCGGCCACCCAAGGCTGCTCCTCCAA...TGGACCTGAGGTAGGGGGTTGGGAGTGAGGAGGCTTCACTTCCTCCCTGCTTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | GTACAGATCACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTGGTCCAAAGAAGACCTaGGAGGATGGGGCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VQITEPGASLTGSLLQSPGPKKT*EDGASL Trigger: GAGGCTGGCCCCATCCTCCCAGGTCTTCTTTGGACC...AGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| 3UTR CAA 72 bp | AGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTaGGAGGGTAGCCGATCTTCCGCAGCATTCATCTGG | + |
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Preference number: 4 (lower is better) Translates to: RGITDWQSPPEP*EGSRSSAAFIW Trigger: CCAGATGAATGCTGCGGAAGATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | AGAAGCAGGGAGGAAGTGAAGCCTCCTCACTCCCAACCCCCTACCTCAGGTCCAAAAAGTGCCCACAACTaGTCCAGCGACCACTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: RSREEVKPPHSQPPTSGPKSAHN*SSDHCS Trigger: GCTGCAGTGGTCGCTGGAGCAGTTGTGGGCACTTTT...TGGACCTGAGGTAGGGGGTTGGGAGTGAGGAGGCTTCACTTCCTCCCTGCTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | GGGTGTTGTACAGATCACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCACCAACCCAACAAAAGTaGCCACAACTGCTCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GCCTDHRARGITDWQSPPPTQQK*PQLLQR Trigger: TCGCTGGAGCAGTTGTGGGCACTTTTGTTGGGTTGG...TGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTACAACACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | TGTGGGCATCCTCCCAAGATTGAGTCCTCTGTGCCACAAGGAGACCTTTACAGAGGACACTGCCTGAGGTaGGGGTTCATCTACCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CGHPPKIESSVPQGDLYRGHCLR*GFIYPG Trigger: CCCAGGGTAGATGAACCCCCACCTCAGGCAGTGTCC...TCTGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | TTCTTGGAGATTGTGTCTGTCATCACGTCCAAGGTCACGTTGCACTTGGCAAAGGAAGACCTGGGAGGATaGGGCCAGCCTCTCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: FLEIVSVITSKVTLHLAKEDLGG*GQPLPL Trigger: CAGTGGGAGAGGCTGGCCCCATCCTCCCAGGTCTTC...CTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGACACAATCTCCAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214142.2 |
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| CDS-3UTR CCA 90 bp | GCCCACTCTGTTTTGAGCCTTGCAGACATAGACTCCAGACATGGCAATGGAAAGGGTCCAAAGAAGACCTaGGAGGATGGGGCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AHSVLSLADIDSRHGNGKGPKKT*EDGASL Trigger: GAGGCTGGCCCCATCCTCCCAGGTCTTCTTTGGACC...CTTTCCATTGCCATGTCTGGAGTCTATGTCTGCAAGGCTCAAAACAGAGTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214142.2 |
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| CDS-3UTR TCA 90 bp | GTACAGATCACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTCAATGGCATCTTCCTTaGTATCATTGGCCAGCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VQITEPGASLTGSLLQSPQWHLP*YHWPAL Trigger: AAGAGCTGGCCAATGATATCAAGGAAGATGCCATTG...AGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | CAAAGGACAGCATTAGATAAGGGTGTTGTACAGATCACAGAGCCAGGGGCATCACCCAGCCTGACTCTGTaGAGGCACCATCACAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: QRTALDKGVVQITEPGASPSLTL*RHHHRH Trigger: GTGCCTGTGATGGTGCCTGCACAGAGTCAGGCTGGG...TGATGCCCCTGGCTCTGTGATCTGTACAACACCCTTATCTAATGCTGTCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | TGTGGGCATCCTCCCAAGATTGAGTCCTCTGTGCCACAAGGAGACCTTTACAGATTGTGTCTGAGCCTTTaGTCCAAGGCAAGGTCCGGG | + |
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Preference number: 4 (lower is better) Translates to: CGHPPKIESSVPQGDLYRLCLSL*SKARSG Trigger: CCCGGACCTTGCCTTGGACCAAAGGCTCAGACACAA...TCTGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | CTTTTGTCCTTTGACCCAGATTTTAGTCTTACTGAGGCCCAGTATTCCAACAATGTCTCCCTCCTGGAGTaGCCCCAGGCGCAGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: LLSFDPDFSLTEAQYSNNVSLLE*PQAQGH Trigger: GTGTCCCTGCGCCTGGGGGCACTCCAGGAGGGAGAC...ATTGTTGGAATACTGGGCCTCAGTAAGACTAAAATCTGGGTCAAAGGACAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | GGGTGTTGTACAGATCACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCATTGCCTTCATCATTCTaGACATTGACAGAACAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GCCTDHRARGITDWQSPPLPSSF*TLTEQR Trigger: CCGCTGTTCTGTCAATGTGCAGAATGATGAAGGCAA...TGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTACAACACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | CAAAGGACAGCATTAGATAAGGGTGTTGTACAGATCACAGAGCCAGGGGCATCACGACCACTGCAGCCTTaGACCCTGTCATCACGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QRTALDKGVVQITEPGASRPLQP*TLSSRP Trigger: TGGACGTGATGACAGGGTCCAAGGCTGCAGTGGTCG...TGATGCCCCTGGCTCTGTGATCTGTACAACACCCTTATCTAATGCTGTCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | ACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGGTCTTGCTCCGGCGCTaGTACAACAGGACCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: TTKPSQASRTGYINTGRWVLLRR*YNRTSP Trigger: TGGGCTGGTCCTGTTGTACCAGCGCCGGAGCAAGAC...CCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | TGTGGGCATCCTCCCAAGATTGAGTCCTCTGTGCCACAAGGAGACCTTTACAGATACTCCTTGGGGACTTaGAGTTCAGGGTCACATTGG | + |
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Preference number: 4 (lower is better) Translates to: CGHPPKIESSVPQGDLYRYSLGT*SSGSHW Trigger: CCAATGTGACCCTGAACTGCAAGTCCCCAAGGAGTA...TCTGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | ATCCCCCTGCTACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATAAAATGTGCCAGGTCTTaGAGGAGCAGCCTTGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: IPLLQQNPAKPAGQVILIKCARS*RSSLGW Trigger: CCACCCAAGGCTGCTCCTCCAAGACCTGGCACATTT...TATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGTAGCAGGGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR TCA 90 bp | CCCCCTGCTACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACACTTGGAGATTGTGTCTaGGCCTTTGGTCCAAGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PPATTKPSQASRTGYINTLGDCV*AFGPRQ Trigger: TTGCCTTGGACCAAAGGCTCAGACACAATCTCCAAG...TGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGTAGCAGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR TCA 90 bp | CTTTTGTCCTTTGACCCAGATTTTAGTCTTACTGAGGCCCAGTATTCCAACAATGTCAGGGACACTGCCTaGGGTGGGGGTTCATCTACC | + |
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Preference number: 4 (lower is better) Translates to: LLSFDPDFSLTEAQYSNNVRDTA*GGGSST Trigger: GGTAGATGAACCCCCACCTCAGGCAGTGTCCCTGAC...ATTGTTGGAATACTGGGCCTCAGTAAGACTAAAATCTGGGTCAAAGGACAAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | ATCCCCCTGCTACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATAACAGGATGGAGGAGCTaGAGGAACCAGCACTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: IPLLQQNPAKPAGQVILITGWRS*RNQHFE Trigger: CTCAAAGTGCTGGTTCCTCCAGCTCCTCCATCCTGT...TATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGTAGCAGGGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | AAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGAGCGAAAGACAACACCTGGTTTaGTTCCTTCCCTTCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KPSQASRTGYINTGRWSERQHLV*FLPFLF Trigger: GAACAAGAAGGGAAGGAACCAAACCAGGTGTTGTCT...TTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | ACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGATGCTTTTGATGCTGTaGCCTATACTTTTGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TTKPSQASRTGYINTGRWMLLML*PILLPS Trigger: TGAAGGCAAAAGTATAGGCCACAGCATCAAAAGCAT...CCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | ATTTCCTCCTTTTGTCCTTTGACCCAGATTTTAGTCTTACTGAGGCCCAGTATTAGGTCACGTTGCACTTaGCAAAGCCCACTCTGTTTT | + |
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Preference number: 4 (lower is better) Translates to: ISSFCPLTQILVLLRPSIRSRCT*QSPLCF Trigger: AAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCT...AATACTGGGCCTCAGTAAGACTAAAATCTGGGTCAAAGGACAAAAGGAGGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CCA 90 bp | ATTTCCTCCTTTTGTCCTTTGACCCAGATTTTAGTCTTACTGAGGCCCAGTATTAAAGTGTCCCATTCTTaGAGATTGTGTCTGAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: ISSFCPLTQILVLLRPSIKVSHS*RLCLSL Trigger: AAGGCTCAGACACAATCTCCAAGAATGGGACACTTT...AATACTGGGCCTCAGTAAGACTAAAATCTGGGTCAAAGGACAAAAGGAGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR GCA 90 bp | CTTTTGTCCTTTGACCCAGATTTTAGTCTTACTGAGGCCCAGTATTCCAACAATTGTGGCCTATACTTTTaGCTTCATCATTCTGCACAT | + |
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Preference number: 4 (lower is better) Translates to: LLSFDPDFSLTEAQYSNNCGLYF*LHHSAH Trigger: ATGTGCAGAATGATGAAGGCAAAAGTATAGGCCACA...ATTGTTGGAATACTGGGCCTCAGTAAGACTAAAATCTGGGTCAAAGGACAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS GCA 90 bp | GATCAGGATGGGCACCTCCCGGGGGTGGGACCACGACTCCTCCCGTaGCATCGTGTACCAGGCGGGGAGCACCACTTCTTCTCCCTCTAC | + |
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Preference number: 5 (lower is better) Translates to: DQDGHLPGVGPRLLP*HRVPGGEHHFFSLY Trigger: GTAGAGGGAGAAGAAGTGGTGCTCCCCGCCTGGTACACGATGGCACGGGAGGAGTCGTGGTCCCACCCCCGGGAGGTGCCCATCCTGATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002011.14 ENSMUST00000123198.2 ENSMUST00000144596.2 ENSMUST00000146860.8 |
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| CDS CCA 90 bp | CCTTCTTGTTCCAAGAACCAGATCAGGATGGGCACCTCCCGGGGGTaGGACCACGACTCCTCCCGTGCCATCGTGTACCAGGCGGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PSCSKNQIRMGTSRG*DHDSSRAIVYQAGS Trigger: GCTCCCCGCCTGGTACACGATGGCACGGGAGGAGTCGTGGTCCCACCCCCGGGAGGTGCCCATCCTGATCTGGTTCTTGGAACAAGAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002011.14 ENSMUST00000123198.2 ENSMUST00000146860.8 |
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| CDS-3UTR CAA 90 bp | GGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCGATCTTGCGACCACTGCAGCCTaGGACCCTGTCATCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: GASLTGSLLQSPWRVADLATTAA*DPVITS Trigger: GGACGTGATGACAGGGTCCAAGGCTGCAGTGGTCGC...AAGATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS TCA 90 bp | AGGCGGGGAGCACCACTTCTTCTCCCTCTACCGCTTCCAATTTGTTaGGGCCCGGGGGCACGTGCAACTCCATCTGAGCTCGGGAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: RRGAPLLLPLPLPIC*GPGARATPSELGRR Trigger: CCTTCTCCCGAGCTCAGATGGAGTTGCACGTGCCCCCGGGCCTCAACAAATTGGAAGCGGTAGAGGGAGAAGAAGTGGTGCTCCCCGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS TCA 90 bp | ACCGCTTCCAATTTGTTGAGGCCCGGGGGCACGTGCAACTCCATCTaGGCTCGGGAGAAGGCAGCAAGGGTACTCAGTCCCAGGAACAAA | + |
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Preference number: 5 (lower is better) Translates to: TASNLLRPGGTCNSI*AREKAARVLSPRNK Trigger: TTTGTTCCTGGGACTGAGTACCCTTGCTGCCTTCTCCCGAGCTCAGATGGAGTTGCACGTGCCCCCGGGCCTCAACAAATTGGAAGCGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS GCA 90 bp | GGTACAACAGGACCAGCCCAGCTATCAGCACCAACCCAACAAAAGTaGCCACAACTGCTCCAGCGACCACTGCAGCCTTGGACCCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: GTTGPAQLSAPTQQK*PQLLQRPLQPWTLS Trigger: TGACAGGGTCCAAGGCTGCAGTGGTCGCTGGAGCAGTTGTGGGCACTTTTGTTGGGTTGGTGCTGATAGCTGGGCTGGTCCTGTTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTTGGAGGGTAGCCGATAAGGTCACGTTGCACTaGGCAAAGCCCACTCTGTTT | + |
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Preference number: 5 (lower is better) Translates to: PGASLTGSLLQSPWRVADKVTLH*AKPTLF Trigger: AAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTT...ATCGGCTACCCTCCAAGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS TCA 90 bp | AGCCTTTGGTCCAAGGCAAGGTCCGGGGAGCAATGGCATCTTCCTTaGTATCATTGGCCAGCTCTTCCAAGGTCTTGCTCCGGCGCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLWSKARSGEQWHLP*YHWPALPRSCSGAG Trigger: ACCAGCGCCGGAGCAAGACCTTGGAAGAGCTGGCCAATGATATCAAGGAAGATGCCATTGCTCCCCGGACCTTGCCTTGGACCAAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CCA 90 bp | ACCCAACAAAAGTGCCCACAACTGCTCCAGCGACCACTGCAGCCTTaGACCCTGTCATCACGTCCAAGGTCACGTTGCACTTGGCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: TQQKCPQLLQRPLQP*TLSSRPRSRCTWQS Trigger: GCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGGGTCCAAGGCTGCAGTGGTCGCTGGAGCAGTTGTGGGCACTTTTGTTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS-3UTR CAA 90 bp | TGTGGGCATCCTCCCAAGATTGAGTCCTCTGTGCCACAAGGAGACCTTTACAGAACCGCTTCCAATTTGTaGAGGCCCGGGGGCACGTGC | + |
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Preference number: 5 (lower is better) Translates to: CGHPPKIESSVPQGDLYRTASNL*RPGGTC Trigger: GCACGTGCCCCCGGGCCTCAACAAATTGGAAGCGGT...TCTGTAAAGGTCTCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | GGGTGTTGTACAGATCACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAACGTCCAAGGTCACGTaGCACTTGGCAAAGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: GCCTDHRARGITDWQSPPTSKVT*HLAKPT Trigger: AGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGT...TGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTACAACACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | AGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGAGCGAACGGCAACTTGGAGGAGCAGCCTaGGGTGGCCGCAGAGCTCGT | + |
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Preference number: 5 (lower is better) Translates to: SQASRTGYINTGRWSERQLGGAA*GGRRAR Trigger: ACGAGCTCTGCGGCCACCCAAGGCTGCTCCTCCAAG...TTGCCGTTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS GCA 90 bp | CGACCACTGCAGCCTTGGACCCTGTCATCACGTCCAAGGTCACGTTaGACTTGGCAAAGCCCACTCTGTTTTGAGCCTTGCAGACATAGA | + |
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Preference number: 5 (lower is better) Translates to: RPLQPWTLSSRPRSR*TWQSPLCFEPCRHR Trigger: TCTATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGGGTCCAAGGCTGCAGTGGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS CCA 90 bp | CTGCAGCCTTGGACCCTGTCATCACGTCCAAGGTCACGTTGCACTTaGCAAAGCCCACTCTGTTTTGAGCCTTGCAGACATAGACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LQPWTLSSRPRSRCT*QSPLCFEPCRHRLQ Trigger: CTGGAGTCTATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGGGTCCAAGGCTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS-3UTR CAA 90 bp | AGAAGCAGGGAGGAAGTGAAGCCTCCTCACTCCCAACCCCCTACCTCAGGTCCATGGTTCCTTCCCTTCTaGTTCCAAGAACCAGATCAG | + |
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Preference number: 5 (lower is better) Translates to: RSREEVKPPHSQPPTSGPWFLPF*FQEPDQ Trigger: CTGATCTGGTTCTTGGAACAAGAAGGGAAGGAACCA...TGGACCTGAGGTAGGGGGTTGGGAGTGAGGAGGCTTCACTTCCTCCCTGCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | GTACAGATCACAGAGCCAGGGGCATCACTGACTGGCAGTCTCCTCCAGAGCCCTGAAAGTGTCCCATTCTaGGAGATTGTGTCTGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: VQITEPGASLTGSLLQSPESVPF*EIVSEP Trigger: AGGCTCAGACACAATCTCCAAGAATGGGACACTTTC...AGGGCTCTGGAGGAGACTGCCAGTCAGTGATGCCCCTGGCTCTGTGATCTGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CCA 90 bp | TCCTTGATATCATTGGCCAGCTCTTCCAAGGTCTTGCTCCGGCGCTaGTACAACAGGACCAGCCCAGCTATCAGCACCAACCCAACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SLISLASSSKVLLRR*YNRTSPAISTNPTK Trigger: TTTTGTTGGGTTGGTGCTGATAGCTGGGCTGGTCCTGTTGTACCAGCGCCGGAGCAAGACCTTGGAAGAGCTGGCCAATGATATCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | ATCCCCCTGCTACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATATCTACCGCTTCCAATTaGTTGAGGCCCGGGGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: IPLLQQNPAKPAGQVILISTASN*LRPGGT Trigger: CGTGCCCCCGGGCCTCAACAAATTGGAAGCGGTAGA...TATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGTAGCAGGGGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | GGAGGTCTAGAATGTGGGCATCCTCCCAAGATTGAGTCCTCTGTGCCACAAGGATCCCATTCTTGGAGATaGTGTCTGAGCCTTTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GGLECGHPPKIESSVPQGSHSWR*CLSLWS Trigger: GGACCAAAGGCTCAGACACAATCTCCAAGAATGGGA...TCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACATTCTAGACCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | GGAGGTCTAGAATGTGGGCATCCTCCCAAGATTGAGTCCTCTGTGCCACAAGGATTGAGCTCTATGCTTTaGATGCTGTGGCCTATACTT | + |
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Preference number: 5 (lower is better) Translates to: GGLECGHPPKIESSVPQGLSSML*MLWPIL Trigger: AAGTATAGGCCACAGCATCAAAAGCATAGAGCTCAA...TCCTTGTGGCACAGAGGACTCAATCTTGGGAGGATGCCCACATTCTAGACCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGAGCGAAGGAGGAACCAGCACTTaGAGCTCTATGCTTTTGATG | + |
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Preference number: 5 (lower is better) Translates to: KPSQASRTGYINTGRWSEGGTST*SSMLLM Trigger: CATCAAAAGCATAGAGCTCAAAGTGCTGGTTCCTCC...TTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | AAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGAGCGAATCTTCCTTGATATCATaGGCCAGCTCTTCCAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: KPSQASRTGYINTGRWSESSLIS*ASSSKV Trigger: GACCTTGGAAGAGCTGGCCAATGATATCAAGGAAGA...TTCGCTCCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS-3UTR CAA 90 bp | ACAACAAAACCCAGCCAAGCCAGCAGGACAGGTTATATTAATACAGGGAGATGGGCAATGGCATCTTCCTaGATATCATTGGCCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: TTKPSQASRTGYINTGRWAMASS*ISLASS Trigger: AGAGCTGGCCAATGATATCAAGGAAGATGCCATTGC...CCATCTCCCTGTATTAATATAACCTGTCCTGCTGGCTTGGCTGGGTTTTGTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CCA 90 bp | AGGTTTATTTGTCATGACTCCATTAATGTAAGACAACACCTGGTTTaGTTCCTTCCCTTCTTGTTCCAAGAACCAGATCAGGATGGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RFICHDSINVRQHLV*FLPFLFQEPDQDGH Trigger: GTGCCCATCCTGATCTGGTTCTTGGAACAAGAAGGGAAGGAACCAAACCAGGTGTTGTCTTACATTAATGGAGTCATGACAAATAAACCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002011.14 ENSMUST00000123198.2 ENSMUST00000146860.8 |
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| CDS GCA 72 bp | GGGCACCTCCCGGGGGTGGGACCACGACTCCTCCCGTaGCATCGTGTACCAGGCGGGGAGCACCACTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GHLPGVGPRLLP*HRVPGGEHHFF Trigger: GAAGAAGTGGTGCTCCCCGCCTGGTACACGATGGCACGGGAGGAGTCGTGGTCCCACCCCCGGGAGGTGCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002011.14 ENSMUST00000123198.2 ENSMUST00000144596.2 ENSMUST00000146860.8 |
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| CDS CCA 72 bp | TCCAAGAACCAGATCAGGATGGGCACCTCCCGGGGGTaGGACCACGACTCCTCCCGTGCCATCGTGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: SKNQIRMGTSRG*DHDSSRAIVYQ Trigger: CTGGTACACGATGGCACGGGAGGAGTCGTGGTCCCACCCCCGGGAGGTGCCCATCCTGATCTGGTTCTTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002011.14 ENSMUST00000123198.2 ENSMUST00000146860.8 |
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| CDS CCA 72 bp | AGAGACACTGGGTGTGGGAGTAAATGTGCCAGGTCTTaGAGGAGCAGCCTTGGGTGGCCGCAGAGCTCGTGC | + |
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Preference number: 6 (lower is better) Translates to: RDTGCGSKCARS*RSSLGWPQSSC Trigger: GCACGAGCTCTGCGGCCACCCAAGGCTGCTCCTCCAAGACCTGGCACATTTACTCCCACACCCAGTGTCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CAA 72 bp | GTGGGAGTAAATGTGCCAGGTCTTGGAGGAGCAGCCTaGGGTGGCCGCAGAGCTCGTGCTGAGGTGACCGAA | + |
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Preference number: 6 (lower is better) Translates to: VGVNVPGLGGAA*GGRRARAEVTE Trigger: TTCGGTCACCTCAGCACGAGCTCTGCGGCCACCCAAGGCTGCTCCTCCAAGACCTGGCACATTTACTCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS GCA 72 bp | GGACCAGCCCAGCTATCAGCACCAACCCAACAAAAGTaGCCACAACTGCTCCAGCGACCACTGCAGCCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: GPAQLSAPTQQK*PQLLQRPLQPW Trigger: CCAAGGCTGCAGTGGTCGCTGGAGCAGTTGTGGGCACTTTTGTTGGGTTGGTGCTGATAGCTGGGCTGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS TCA 72 bp | TGGAGGAGCAGCCTTGGGTGGCCGCAGAGCTCGTGCTaGGGTGACCGAAGAAAGTGTCCCATTCTTGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: WRSSLGWPQSSC*GDRRKCPILGD Trigger: ATCTCCAAGAATGGGACACTTTCTTCGGTCACCTCAGCACGAGCTCTGCGGCCACCCAAGGCTGCTCCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CCA 72 bp | AAGTGCCCACAACTGCTCCAGCGACCACTGCAGCCTTaGACCCTGTCATCACGTCCAAGGTCACGTTGCACT | + |
|
Preference number: 6 (lower is better) Translates to: KCPQLLQRPLQP*TLSSRPRSRCT Trigger: AGTGCAACGTGACCTTGGACGTGATGACAGGGTCCAAGGCTGCAGTGGTCGCTGGAGCAGTTGTGGGCACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS TCA 72 bp | GAGCAGCCTTGGGTGGCCGCAGAGCTCGTGCTGAGGTaGCCGAAGAAAGTGTCCCATTCTTGGAGATTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: EQPWVAAELVLR*PKKVSHSWRLC Trigger: ACACAATCTCCAAGAATGGGACACTTTCTTCGGTCACCTCAGCACGAGCTCTGCGGCCACCCAAGGCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CAA 90 bp | GCAATGGCATCTTCCTTGATATCATTGGCCAGCTCTTCCAAGGTCTaGCTCCGGCGCTGGTACAACAGGACCAGCCCAGCTATCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: AMASSLISLASSSKV*LRRWYNRTSPAIST Trigger: GGTGCTGATAGCTGGGCTGGTCCTGTTGTACCAGCGCCGGAGCAAGACCTTGGAAGAGCTGGCCAATGATATCAAGGAAGATGCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS GCA 72 bp | AGCTATCAGCACCAACCCAACAAAAGTGCCCACAACTaGTCCAGCGACCACTGCAGCCTTGGACCCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: SYQHQPNKSAHN*SSDHCSLGPCH Trigger: ATGACAGGGTCCAAGGCTGCAGTGGTCGCTGGAGCAGTTGTGGGCACTTTTGTTGGGTTGGTGCTGATAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS CAA 72 bp | TCTTCCTTGATATCATTGGCCAGCTCTTCCAAGGTCTaGCTCCGGCGCTGGTACAACAGGACCAGCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSLISLASSSKV*LRRWYNRTSPA Trigger: AGCTGGGCTGGTCCTGTTGTACCAGCGCCGGAGCAAGACCTTGGAAGAGCTGGCCAATGATATCAAGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS TCA 72 bp | TCCAAGGCAAGGTCCGGGGAGCAATGGCATCTTCCTTaGTATCATTGGCCAGCTCTTCCAAGGTCTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKARSGEQWHLP*YHWPALPRSCS Trigger: GGAGCAAGACCTTGGAAGAGCTGGCCAATGATATCAAGGAAGATGCCATTGCTCCCCGGACCTTGCCTTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS TCA 72 bp | GACCGAAGAAAGTGTCCCATTCTTGGAGATTGTGTCTaGGCCTTTGGTCCAAGGCAAGGTCCGGGGAGCAAT | + |
|
Preference number: 6 (lower is better) Translates to: DRRKCPILGDCV*AFGPRQGPGSN Trigger: ATTGCTCCCCGGACCTTGCCTTGGACCAAAGGCTCAGACACAATCTCCAAGAATGGGACACTTTCTTCGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002011.14 |
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| CDS CCA 72 bp | TGGACCCTGTCATCACGTCCAAGGTCACGTTGCACTTaGCAAAGCCCACTCTGTTTTGAGCCTTGCAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: WTLSSRPRSRCT*QSPLCFEPCRH Trigger: ATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATGACAGGGTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS CAA 90 bp | CATCACGTCCAAGGTCACGTTGCACTTGGCAAAGCCCACTCTGTTTaGAGCCTTGCAGACATAGACTCCAGACATGGCAATGGAAAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: HHVQGHVALGKAHSV*SLADIDSRHGNGKV Trigger: AACCTTTCCATTGCCATGTCTGGAGTCTATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACGTGACCTTGGACGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS GCA 72 bp | CGTTGCACTTGGCAAAGCCCACTCTGTTTTGAGCCTTaGAGACATAGACTCCAGACATGGCAATGGAAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RCTWQSPLCFEP*RHRLQTWQWKG Trigger: ACCTTTCCATTGCCATGTCTGGAGTCTATGTCTGCAAGGCTCAAAACAGAGTGGGCTTTGCCAAGTGCAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS TCA 72 bp | TGTGGCCTATACTTTTGCCTTCATCATTCTGCACATTaGCAGAACAGCGGTAAGTCCCAGAGTCTCCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CGLYFCLHHSAH*QNSGKSQSLPP Trigger: AGGAGGGAGACTCTGGGACTTACCGCTGTTCTGTCAATGTGCAGAATGATGAAGGCAAAAGTATAGGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS CCA 72 bp | GGAACCAGCACTTTGAGCTCTATGCTTTTGATGCTGTaGCCTATACTTTTGCCTTCATCATTCTGCACATTG | + |
|
Preference number: 6 (lower is better) Translates to: GTSTLSSMLLML*PILLPSSFCTL Trigger: CAATGTGCAGAATGATGAAGGCAAAAGTATAGGCCACAGCATCAAAAGCATAGAGCTCAAAGTGCTGGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS CAA 72 bp | TTGAGCTCTATGCTTTTGATGCTGTGGCCTATACTTTaGCCTTCATCATTCTGCACATTGACAGAACAGCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSSMLLMLWPIL*PSSFCTLTEQR Trigger: CCGCTGTTCTGTCAATGTGCAGAATGATGAAGGCAAAAGTATAGGCCACAGCATCAAAAGCATAGAGCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002011.14 ENSMUST00000146860.8 |
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| CDS CCA 72 bp | TGTCATGACTCCATTAATGTAAGACAACACCTGGTTTaGTTCCTTCCCTTCTTGTTCCAAGAACCAGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: CHDSINVRQHLV*FLPFLFQEPDQ Trigger: CTGATCTGGTTCTTGGAACAAGAAGGGAAGGAACCAAACCAGGTGTTGTCTTACATTAATGGAGTCATGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002011.14 ENSMUST00000123198.2 ENSMUST00000146860.8 |
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