Pregenerated sensors for ERP44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028343Ensembl transcript IDs: ENSMUST00000030028.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCTGCTCCTATCTCTGGCATCAGCAAGGCCTGGCAGGGACCTTCTaGCTGCCCACTGCAGGCGTGGGGAACCAGGGAAGCGAGGGGAAC | + |
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Preference number: 1 (lower is better) Translates to: LCSYLWHQQGLAGTF*LPTAGVGNQGSEGN Trigger: GTTCCCCTCGCTTCCCTGGTTCCCCACGCCTGCAGTGGGCAGTCAGAAGGTCCCTGCCAGGCCTTGCTGATGCCAGAGATAGGAGCAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 90 bp | TCTCTGGCATCAGCAAGGCCTGGCAGGGACCTTCTGACTGCCCACTaGAGGCGTGGGGAACCAGGGAAGCGAGGGGAACGCCCTCTAACA | + |
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Preference number: 1 (lower is better) Translates to: SLASARPGRDLLTAH*RRGEPGKRGERPLT Trigger: TGTTAGAGGGCGTTCCCCTCGCTTCCCTGGTTCCCCACGCCTGCAGTGGGCAGTCAGAAGGTCCCTGCCAGGCCTTGCTGATGCCAGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR TCA 90 bp | TTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGTaGAGAGTCTTCTCCCTCTGCTCCTATCTCTGGCATCAGCAAGGC | + |
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Preference number: 1 (lower is better) Translates to: FRACLTSGTGIPDIT*RVFSLCSYLWHQQG Trigger: GCCTTGCTGATGCCAGAGATAGGAGCAGAGGGAGAAGACTCTTCACGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR TCA 90 bp | AAATATTATCTCCCCAAACTGGGACTGACTTATCCCAAGGATAAATaGCCTTGGCCTATAGCACCACACCCAGGCCCTGAGGAGAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: KYYLPKLGLTYPKDK*PWPIAPHPGPEESQ Trigger: TTGGCTCTCCTCAGGGCCTGGGTGTGGTGCTATAGGCCAAGGTCATTTATCCTTGGGATAAGTCAGTCCCAGTTTGGGGAGATAATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 90 bp | CTAGACAGAGAAAGCCTTAAAATGTCTAGTTTAACGCTGGTAACCTaGTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGGTTAATTCAT | + |
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Preference number: 1 (lower is better) Translates to: LDRESLKMSSLTLVT*STRVPAFLISGLIH Trigger: ATGAATTAACCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGTTACCAGCGTTAAACTAGACATTTTAAGGCTTTCTCTGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 90 bp | ACATTAGGAATCCAAGAAGAACCACTATGGAACCCTCATAAGCAATaGCCAACCAATCAGTACAACACAGTACACAGTGTGAAATTTTTA | + |
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Preference number: 1 (lower is better) Translates to: TLGIQEEPLWNPHKQ*PTNQYNTVHSVKFL Trigger: TAAAAATTTCACACTGTGTACTGTGTTGTACTGATTGGTTGGGCATTGCTTATGAGGGTTCCATAGTGGTTCTTCTTGGATTCCTAATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCCAATTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGTGCCCACTGCAGGCGTaGGGAACCAGGGAAGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: ESQFRACLTSGTGIPDITCPLQA*GTREAR Trigger: CCTCGCTTCCCTGGTTCCCCACGCCTGCAGTGGGCA...CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCCAATTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGCATTTCTTTGCCAAATaGTCTGGCTTATGGCTCTCC | + |
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Preference number: 2 (lower is better) Translates to: ESQFRACLTSGTGIPDITHFFAK*SGLWLS Trigger: GGAGAGCCATAAGCCAGAGCATTTGGCAAAGAAATG...CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR CAA 90 bp | GGAACCAGGGAAGCGAGGGGAACGCCCTCTAACAATCCTAGACAGTaGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: GTREARGTPSNNPRQ*MTEECKTLVPQHLC Trigger: GCAAAGATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTTAGAGGGCGTTCCCCTCGCTTCCCTGGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGGTTAATTCATTCAAAGAAGCCTCTGCTGGTGTaGAAAGGCTTGCAGTATTCT | + |
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Preference number: 2 (lower is better) Translates to: TCSTRVPAFLISGLIHSKKPLLV*KGLQYS Trigger: AGAATACTGCAAGCCTTTCCACACCAGCAGAGGCTT...CTTTGAATGAATTAACCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR-3UTR CCA 90 bp | CCATATGCAAAGAAAAGAAGAAAGAAAAAGCAGATAGCACACAGGGAGCAGGCCGTGGAGACAGGCCTCTaGTTTTTATTTTGTTCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PYAKKRRKKKQIAHREQAVETGL*FLFCSL Trigger: TAAAGAACAAAATAAAAACCAGAGGCCTGTCTCCAC...GGCCTGCTCCCTGTGTGCTATCTGCTTTTTCTTTCTTCTTTTCTTTGCATATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTCATAGTATGTTTAAGTTAAGGACAGATTTAAAGTaGAGACAGGCCTCTGGTTTT | + |
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Preference number: 2 (lower is better) Translates to: LPNALAYGSPPLHSMFKLRTDLK*RQASGF Trigger: AAAACCAGAGGCCTGTCTCCACTTTAAATCTGTCCT...TAACTTAAACATACTATGAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 72 bp | TCAGCAAGGCCTGGCAGGGACCTTCTGACTGCCCACTaGAGGCGTGGGGAACCAGGGAAGCGAGGGGAACGC | + |
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Preference number: 3 (lower is better) Translates to: SARPGRDLLTAH*RRGEPGKRGER Trigger: GCGTTCCCCTCGCTTCCCTGGTTCCCCACGCCTGCAGTGGGCAGTCAGAAGGTCCCTGCCAGGCCTTGCTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 72 bp | CCACACCCAGGCCCTGAGGAGAGCCAATTTAGAGCCTaGCTGACCTCTGGCACTGGGATTCCTGATATAACG | + |
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Preference number: 3 (lower is better) Translates to: PHPGPEESQFRA*LTSGTGIPDIT Trigger: CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTCCTCAGGGCCTGGGTGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR TCA 72 bp | CTCCCCAAACTGGGACTGACTTATCCCAAGGATAAATaGCCTTGGCCTATAGCACCACACCCAGGCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: LPKLGLTYPKDK*PWPIAPHPGPE Trigger: CTCAGGGCCTGGGTGTGGTGCTATAGGCCAAGGTCATTTATCCTTGGGATAAGTCAGTCCCAGTTTGGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR-3UTR CAA 90 bp | TCAGCAAGGCCTGGCAGGGACCTTCTGACTGCCCACTGCAGGCGTGGGGAACCAAATACTTCCATTTCTTaGCCAAATGCTCTGGCTTAT | + |
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Preference number: 3 (lower is better) Translates to: SARPGRDLLTAHCRRGEPNTSIS*PNALAY Trigger: ATAAGCCAGAGCATTTGGCAAAGAAATGGAAGTATT...TGGTTCCCCACGCCTGCAGTGGGCAGTCAGAAGGTCCCTGCCAGGCCTTGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR TCA 72 bp | TGCCTGACCTCTGGCACTGGGATTCCTGATATAACGTaGAGAGTCTTCTCCCTCTGCTCCTATCTCTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: CLTSGTGIPDIT*RVFSLCSYLWH Trigger: ATGCCAGAGATAGGAGCAGAGGGAGAAGACTCTTCACGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 72 bp | GTTAACGGCGTGCTTCCGGCAATGCCACCTTCCGCTTaGATGATAAAGACTGTCCAGGACAGATTTAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: VNGVLPAMPPSA*MIKTVQDRFKV Trigger: CACTTTAAATCTGTCCTGGACAGTCTTTATCATGCAAGCGGAAGGTGGCATTGCCGGAAGCACGCCGTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 72 bp | GAAAGCCTTAAAATGTCTAGTTTAACGCTGGTAACCTaGTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: ESLKMSSLTLVT*STRVPAFLISG Trigger: CCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGTTACCAGCGTTAAACTAGACATTTTAAGGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 72 bp | ATCCAAGAAGAACCACTATGGAACCCTCATAAGCAATaGCCAACCAATCAGTACAACACAGTACACAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: IQEEPLWNPHKQ*PTNQYNTVHSV Trigger: CACACTGTGTACTGTGTTGTACTGATTGGTTGGGCATTGCTTATGAGGGTTCCATAGTGGTTCTTCTTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| 3UTR GCA 72 bp | CAGACATATAGAAATTTAGTAATACTTCCATTTCTTTaGCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: QTYRNLVILPFL*QMLWLMALLLF Trigger: GAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAAAGAAATGGAAGTATTACTAAATTTCTATATGTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | TCAGCAAGGCCTGGCAGGGACCTTCTGACTGCCCACTGCAGGCGTGGGGAACCACTGGTCTTGCTCTCCTaGGGCTGTGTCAGTCGGGTC | + |
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Preference number: 4 (lower is better) Translates to: SARPGRDLLTAHCRRGEPLVLLS*GCVSRV Trigger: GACCCGACTGACACAGCCCCAGGAGAGCAAGACCAG...TGGTTCCCCACGCCTGCAGTGGGCAGTCAGAAGGTCCCTGCCAGGCCTTGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | GAGAGCCAATTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGCTGCTCGCTACATCCTaGTCTTGCTCTCCTGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ESQFRACLTSGTGIPDITLLATS*SCSPGA Trigger: AGCCCCAGGAGAGCAAGACCAGGATGTAGCGAGCAG...CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTCATAGTATGTTTAAGTTACTGGGCGCCAGCTTCTaGAAGGAGCTCTCTGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LPNALAYGSPPLHSMFKLLGASF*KELSGG Trigger: TCCTCCAGAGAGCTCCTTCCAGAAGCTGGCGCCCAG...TAACTTAAACATACTATGAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | CTTCCGGCAATGCCACCTTCCGCTTGCATGATAAAGACTGTCCAGGACAGATTTGCTATATCAGAGTGCTaGTCACAATCAACTCTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LPAMPPSACMIKTVQDRFAISEC*SQSTLA Trigger: TGCCAGAGTTGATTGTGATCAGCACTCTGATATAGC...AAATCTGTCCTGGACAGTCTTTATCATGCAAGCGGAAGGTGGCATTGCCGGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | ACCTGCTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGGTTAATTCATTCAAAGTACTTTTCTGTTGCCTaGTGTAGTCTGCAAGCGCTT | + |
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Preference number: 4 (lower is better) Translates to: TCSTRVPAFLISGLIHSKYFSVA*CSLQAL Trigger: AAGCGCTTGCAGACTACATCAGGCAACAGAAAAGTA...CTTTGAATGAATTAACCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | GAGAGCCAATTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGGTACCTTTCTGGTTTTaGAAGATCTCCAAAAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: ESQFRACLTSGTGIPDITVPFWF*KISKSR Trigger: TCTGCTTTTGGAGATCTTTCAAAACCAGAAAGGTAC...CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTCATAGTATGTTTAAGTTAAACTGTCAATGGCTATaGCAGGGCAATCTGCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LPNALAYGSPPLHSMFKLNCQWL*QGNLLA Trigger: CGCCAGCAGATTGCCCTGTCATAGCCATTGACAGTT...TAACTTAAACATACTATGAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | CTTCCGGCAATGCCACCTTCCGCTTGCATGATAAAGACTGTCCAGGACAGATTTTGCTTCCTCAAAAATTaGATGCAACATCTGGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LPAMPPSACMIKTVQDRFCFLKN*MQHLAE Trigger: TTCAGCCAGATGTTGCATCCAATTTTTGAGGAAGCA...AAATCTGTCCTGGACAGTCTTTATCATGCAAGCGGAAGGTGGCATTGCCGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | TTGCCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTCATAGTATGTTTAAGTTAGATGCAACATCTGGCTaGAACGACACCAGTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: LPNALAYGSPPLHSMFKLDATSG*NDTSQH Trigger: ATGCTGACTGGTGTCGTTTCAGCCAGATGTTGCATC...TAACTTAAACATACTATGAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATTGCAAGCGCTTTCACTaGTCGCTGGCCCCTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: NNPRQLMTEECKTLVPQHCKRFH*SLAPVF Trigger: GAATACAGGGGCCAGCGATCAGTGAAAGCGCTTGCA...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR GCA 90 bp | ACCTGCTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGGTTAATTCATTCAAAGTCCTCAAAAATTGGATaGAACATCTGGCTGAAACGA | + |
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Preference number: 4 (lower is better) Translates to: TCSTRVPAFLISGLIHSKSSKIG*NIWLKR Trigger: TCGTTTCAGCCAGATGTTGCATCCAATTTTTGAGGA...CTTTGAATGAATTAACCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR GCA 90 bp | CTTCCGGCAATGCCACCTTCCGCTTGCATGATAAAGACTGTCCAGGACAGATTTAAGGCACAGTCATCATaGAAAATACTTGCTACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LPAMPPSACMIKTVQDRFKAQSS*KILATL Trigger: AAGAGTAGCAAGTATTTTGCATGATGACTGTGCCTT...AAATCTGTCCTGGACAGTCTTTATCATGCAAGCGGAAGGTGGCATTGCCGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | GAGAGCCAATTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGGATCACAATCAACTCTaGCAAACACTACTTGATTTT | + |
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Preference number: 4 (lower is better) Translates to: ESQFRACLTSGTGIPDITDHNQL*QTLLDF Trigger: AAAATCAAGTAGTGTTTGCCAGAGTTGATTGTGATC...CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | TTGCCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTCATAGTATGTTTAAGTTAGCTTTCACTGATCGCTaGCCCCTGTATTCTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPNALAYGSPPLHSMFKLAFTDR*PLYSLF Trigger: GAAGAGAGAATACAGGGGCCAGCGATCAGTGAAAGC...TAACTTAAACATACTATGAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CCA 90 bp | ACCTGCTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGGTTAATTCATTCAAAGGGCGTTTTCTGGATATaGAGAAGAGGATGTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: TCSTRVPAFLISGLIHSKGVFWI*RRGCLN Trigger: ATTTAGACATCCTCTTCTCCATATCCAGAAAACGCC...CTTTGAATGAATTAACCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | ACCTGCTCCACCAGGGTCCCTGCTTTCCTGATTTCAGGGTTAATTCATTCAAAGGCTCAAAGTATCCAATaGTATTTCTCTTACTGCGAT | + |
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Preference number: 4 (lower is better) Translates to: TCSTRVPAFLISGLIHSKAQSIQ*YFSYCD Trigger: ATCGCAGTAAGAGAAATATCATTGGATACTTTGAGC...CTTTGAATGAATTAACCCTGAAATCAGGAAAGCAGGGACCCTGGTGGAGCAGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR GCA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATTCAGGGTTGGGTATTTaGTTATCCTGTACCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: NNPRQLMTEECKTLVPQHSGLGI*LSCTSG Trigger: CCCAGAGGTACAGGATAAGCAAATACCCAACCCTGA...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR GCA 90 bp | TTGCCAAATGCTCTGGCTTATGGCTCTCCTCCTCTTCATAGTATGTTTAAGTTATTTTCACTTATCAACTaGCGGGCTACTTCATTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LPNALAYGSPPLHSMFKLFSLIN*RATSFW Trigger: CCAGAATGAAGTAGCCCGGCAGTTGATAAGTGAAAA...TAACTTAAACATACTATGAAGAGGAGGAGAGCCATAAGCCAGAGCATTTGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR TCA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATTATAGGTGTAAAAATTaGAGTTACCAGGAGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: NNPRQLMTEECKTLVPQHYRCKN*SYQEQQ Trigger: TTGCTGCTCCTGGTAACTTCAATTTTTACACCTATA...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR GCA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATCTTAATGACATCAGATaGTTCCTCAAAAATTGGATG | + |
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Preference number: 4 (lower is better) Translates to: NNPRQLMTEECKTLVPQHLNDIR*FLKNWM Trigger: CATCCAATTTTTGAGGAAGCATCTGATGTCATTAAG...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR GCA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATCCAAAAACATACATATaGCTAAAACTGTCAATGGCT | + |
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Preference number: 4 (lower is better) Translates to: NNPRQLMTEECKTLVPQHPKTYI*LKLSMA Trigger: AGCCATTGACAGTTTTAGGCATATGTATGTTTTTGG...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | TCAGCAAGGCCTGGCAGGGACCTTCTGACTGCCCACTGCAGGCGTGGGGAACCATGGGTTACTTTTCTGTaGCCTGATGTAGTCTGCAAG | + |
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Preference number: 5 (lower is better) Translates to: SARPGRDLLTAHCRRGEPWVTFL*PDVVCK Trigger: CTTGCAGACTACATCAGGCAACAGAAAAGTAACCCA...TGGTTCCCCACGCCTGCAGTGGGCAGTCAGAAGGTCCCTGCCAGGCCTTGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | CCATATGCAAAGAAAAGAAGAAAGAAAAAGCAGATAGCACACAGGGAGCAGGCCCGCTACATCCTGGTCTaGCTCTCCTGGGGCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: PYAKKRRKKKQIAHREQARYILV*LSWGCV Trigger: GACACAGCCCCAGGAGAGCAAGACCAGGATGTAGCG...GGCCTGCTCCCTGTGTGCTATCTGCTTTTTCTTTCTTCTTTTCTTTGCATATGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | GAGAGCCAATTTAGAGCCTGCCTGACCTCTGGCACTGGGATTCCTGATATAACGTTCAGGGTTGGGTATTaGCTTATCCTGTACCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: ESQFRACLTSGTGIPDITFRVGY*LILYLW Trigger: CCAGAGGTACAGGATAAGCAAATACCCAACCCTGAA...CGTTATATCAGGAATCCCAGTGCCAGAGGTCAGGCAGGCTCTAAATTGGCTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS TCA 90 bp | CATCTAGACTCTGAATCTCGTGGACTGGGTTACTTTTCTGTTGCCTaGTGTAGTCTGCAAGCGCTTTCACTGATCGCTGGCCCCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: HLDSESRGLGYFSVA*CSLQALSLIAGPCI Trigger: AATACAGGGGCCAGCGATCAGTGAAAGCGCTTGCAGACTACATCAGGCAACAGAAAAGTAACCCAGTCCACGAGATTCAGAGTCTAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS TCA 90 bp | TGGGTTACTTTTCTGTTGCCTGATGTAGTCTGCAAGCGCTTTCACTaGTCGCTGGCCCCTGTATTCTCTCTTCATCATCATTCCATTACG | + |
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Preference number: 5 (lower is better) Translates to: WVTFLLPDVVCKRFH*SLAPVFSLHHHSIT Trigger: CGTAATGGAATGATGATGAAGAGAGAATACAGGGGCCAGCGATCAGTGAAAGCGCTTGCAGACTACATCAGGCAACAGAAAAGTAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 90 bp | GTAAGTTACATCAAAATTTGTCATAGATCCCAAGTACACCATGTCTaGCGCAGAACGCCCGGGTGGTTTGTAGATTACATTGTCTCCGTT | + |
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Preference number: 5 (lower is better) Translates to: VSYIKICHRSQVHHV*RRTPGWFVDYIVSV Trigger: AACGGAGACAATGTAATCTACAAACCACCCGGGCGTTCTGCGCCAGACATGGTGTACTTGGGATCTATGACAAATTTTGATGTAACTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | CCATATGCAAAGAAAAGAAGAAAGAAAAAGCAGATAGCACACAGGGAGCAGGCCTTACTGCGATCAAGATaGGTGACTTCATCTAGACTC | + |
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Preference number: 5 (lower is better) Translates to: PYAKKRRKKKQIAHREQALLRSR*VTSSRL Trigger: GAGTCTAGATGAAGTCACCAATCTTGATCGCAGTAA...GGCCTGCTCCCTGTGTGCTATCTGCTTTTTCTTTCTTCTTTTCTTTGCATATGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATTGTACCTTTCTGGTTTaGAAAGATCTCCAAAAGCAG | + |
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Preference number: 5 (lower is better) Translates to: NNPRQLMTEECKTLVPQHCTFLV*KDLQKQ Trigger: CTGCTTTTGGAGATCTTTCAAAACCAGAAAGGTACA...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 90 bp | ACTTCATTCTGGAATATTTCTAAACTTTCTGTATCATCCTTCATGTaGAAGAGTATGAGAAAAGGCAGTCCTTCTTCTGTCAATTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: TSFWNISKLSVSSFM*KSMRKGSPSSVNSS Trigger: AGAGGAATTGACAGAAGAAGGACTGCCTTTTCTCATACTCTTCCACATGAAGGATGATACAGAAAGTTTAGAAATATTCCAGAATGAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATAGGGACACATTTATCTaGAATCCAGTTGTAAGTTAC | + |
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Preference number: 5 (lower is better) Translates to: NNPRQLMTEECKTLVPQHRDTFI*NPVVSY Trigger: GTAACTTACAACTGGATTCAAGATAAATGTGTCCCT...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS-3UTR CAA 90 bp | AACAATCCTAGACAGTTGATGACAGAAGAATGTAAAACGCTTGTTCCTCAACATAGAGGATGTCTAAATTaGTCACAATCTGCATGTAAG | + |
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Preference number: 5 (lower is better) Translates to: NNPRQLMTEECKTLVPQHRGCLN*SQSACK Trigger: CTTACATGCAGATTGTGACAAATTTAGACATCCTCT...ATGTTGAGGAACAAGCGTTTTACATTCTTCTGTCATCAACTGTCTAGGATTGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 90 bp | TTTATTGTACCTTTTTCACTTATCAACTGCCGGGCTACTTCATTCTaGAATATTTCTAAACTTTCTGTATCATCCTTCATGTGGAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: FIVPFSLINCRATSF*NISKLSVSSFMWKS Trigger: ACTCTTCCACATGAAGGATGATACAGAAAGTTTAGAAATATTCCAGAATGAAGTAGCCCGGCAGTTGATAAGTGAAAAAGGTACAATAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 72 bp | TCCCAAGTACACCATGTCTGGCGCAGAACGCCCGGGTaGTTTGTAGATTACATTGTCTCCGTTGTACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: SQVHHVWRRTPG*FVDYIVSVVPF Trigger: GAAAGGTACAACGGAGACAATGTAATCTACAAACCACCCGGGCGTTCTGCGCCAGACATGGTGTACTTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS TCA 72 bp | TCTGAATCTCGTGGACTGGGTTACTTTTCTGTTGCCTaGTGTAGTCTGCAAGCGCTTTCACTGATCGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: SESRGLGYFSVA*CSLQALSLIAG Trigger: GCCAGCGATCAGTGAAAGCGCTTGCAGACTACATCAGGCAACAGAAAAGTAACCCAGTCCACGAGATTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS TCA 72 bp | TTTCTGTTGCCTGATGTAGTCTGCAAGCGCTTTCACTaGTCGCTGGCCCCTGTATTCTCTCTTCATCATCAT | + |
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Preference number: 6 (lower is better) Translates to: FLLPDVVCKRFH*SLAPVFSLHHH Trigger: ATGATGATGAAGAGAGAATACAGGGGCCAGCGATCAGTGAAAGCGCTTGCAGACTACATCAGGCAACAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS GCA 72 bp | ATGCCTAAAACTGTCAATGGCTATGACAGGGCAATCTaGTGGCGTTTTCTGGATATGGAGAAGAGGATGTCT | + |
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Preference number: 6 (lower is better) Translates to: MPKTVNGYDRAI*WRFLDMEKRMS Trigger: AGACATCCTCTTCTCCATATCCAGAAAACGCCAGCAGATTGCCCTGTCATAGCCATTGACAGTTTTAGGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 72 bp | ATCAAAATTTGTCATAGATCCCAAGTACACCATGTCTaGCGCAGAACGCCCGGGTGGTTTGTAGATTACATT | + |
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Preference number: 6 (lower is better) Translates to: IKICHRSQVHHV*RRTPGWFVDYI Trigger: AATGTAATCTACAAACCACCCGGGCGTTCTGCGCCAGACATGGTGTACTTGGGATCTATGACAAATTTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 72 bp | CCTAAAACTGTCAATGGCTATGACAGGGCAATCTGCTaGCGTTTTCTGGATATGGAGAAGAGGATGTCTAAA | + |
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Preference number: 6 (lower is better) Translates to: PKTVNGYDRAIC*RFLDMEKRMSK Trigger: TTTAGACATCCTCTTCTCCATATCCAGAAAACGCCAGCAGATTGCCCTGTCATAGCCATTGACAGTTTTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CCA 72 bp | TTCTTCCTTAATGACATCAGATGCTTCCTCAAAAATTaGATGCAACATCTGGCTGAAACGACACCAGTCAGC | + |
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Preference number: 6 (lower is better) Translates to: FFLNDIRCFLKN*MQHLAETTPVS Trigger: GCTGACTGGTGTCGTTTCAGCCAGATGTTGCATCCAATTTTTGAGGAAGCATCTGATGTCATTAAGGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS TCA 72 bp | AAGACTTGCTATTTCAGCTGTTATAGGTGTAAAAATTaGAGTTACCAGGAGCAGCAAGGAGCATCTGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: KTCYFSCYRCKN*SYQEQQGASEV Trigger: GACCTCAGATGCTCCTTGCTGCTCCTGGTAACTTCAATTTTTACACCTATAACAGCTGAAATAGCAAGTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS TCA 72 bp | GTAGATTACATTGTCTCCGTTGTACCTTTCTGGTTTTaGAAGATCTCCAAAAGCAGAAAGGAAGGCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: VDYIVSVVPFWF*KISKSRKEGTV Trigger: GACTGTGCCTTCCTTTCTGCTTTTGGAGATCTTTCAAAACCAGAAAGGTACAACGGAGACAATGTAATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CAA 90 bp | TGTATTCTCTCTTCATCATCATTCCATTACGAAATAATTTCAGGGTaGGGTATTTGCTTATCCTGTACCTCTGGGCTATATCAGAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: CILSSSSFHYEIISG*GICLSCTSGLYQSA Trigger: AGCACTCTGATATAGCCCAGAGGTACAGGATAAGCAAATACCCAACCCTGAAATTATTTCGTAATGGAATGATGATGAAGAGAGAATACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CAA 72 bp | TCTTCATCATCATTCCATTACGAAATAATTTCAGGGTaGGGTATTTGCTTATCCTGTACCTCTGGGCTATAT | + |
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Preference number: 6 (lower is better) Translates to: SSSSFHYEIISG*GICLSCTSGLY Trigger: ATATAGCCCAGAGGTACAGGATAAGCAAATACCCAACCCTGAAATTATTTCGTAATGGAATGATGATGAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CAA 90 bp | CAATCTGCTGGCGTTTTCTGGATATGGAGAAGAGGATGTCTAAATTaGTCACAATCTGCATGTAAGAAATTTATTGTACCTTTTTCACTT | + |
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Preference number: 6 (lower is better) Translates to: QSAGVFWIWRRGCLN*SQSACKKFIVPFSL Trigger: AAGTGAAAAAGGTACAATAAATTTCTTACATGCAGATTGTGACAAATTTAGACATCCTCTTCTCCATATCCAGAAAACGCCAGCAGATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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| CDS CAA 72 bp | AGAGTGCTGATCACAATCAACTCTGGCAAACACTACTaGATTTTTATCTGGATATTCTTCCTTAATGACATC | + |
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Preference number: 6 (lower is better) Translates to: RVLITINSGKHY*IFIWIFFLNDI Trigger: GATGTCATTAAGGAAGAATATCCAGATAAAAATCAAGTAGTGTTTGCCAGAGTTGATTGTGATCAGCACTCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030028.5 |
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