Pregenerated sensors for ERP29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029616Ensembl transcript IDs: ENSMUST00000052590.8, ENSMUST00000111802.4, ENSMUST00000130451.2, ENSMUST00000153758.2
Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATaGAGGCAGGCACCCAGGCATGCCCAGGTAGACCCCCTGCCCCTT | + |
Preference number: 1 (lower is better) Translates to: LYAGGLDELACQGIV*RQAPRHAQVDPLPL Trigger: AAGGGGCAGGGGGTCTACCTGGGCATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
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3UTR GCA 90 bp | GATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTaGCAGGGCATCGTATGCAGGCAGGCACCCAGGCATGCCCAGGTA | + |
Preference number: 1 (lower is better) Translates to: DGLSGLYAGGLDELA*QGIVCRQAPRHAQV Trigger: TACCTGGGCATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
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3UTR GCA 90 bp | CACACTCGGGGCACAGACTTCTGGCTCAGGCCTGCATTGCTCCACTaGCCCTTCCACCCACAGGGGTCCCACAGCTGGCAGGTAGATCTC | + |
Preference number: 1 (lower is better) Translates to: HTRGTDFWLRPALLH*PFHPQGSHSWQVDL Trigger: GAGATCTACCTGCCAGCTGTGGGACCCCTGTGGGTGGAAGGGGCAGTGGAGCAATGCAGGCCTGAGCCAGAAGTCTGTGCCCCGAGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000130451.2 |
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3UTR GCA 90 bp | TGTCCCATGAGGCGCCAGGCTTCAGCAGGGATGTTCTCAGCCTTCTaGTACTGCTCCCTGGGCCCTTGGCTAGCCCTGCAGAGCCACTGT | + |
Preference number: 1 (lower is better) Translates to: CPMRRQASAGMFSAF*YCSLGPWLALQSHC Trigger: ACAGTGGCTCTGCAGGGCTAGCCAAGGGCCCAGGGAGCAGTAGCAGAAGGCTGAGAACATCCCTGCTGAAGCCTGGCGCCTCATGGGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | TCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTTGTGCTTaGTCACAGCTCCTCCTTCTCAGCCTCCTTCTTCCGGAAGGCCGT | + |
Preference number: 1 (lower is better) Translates to: SLLSCPWQTLGNPCA*SQLLLLSLLLPEGR Trigger: ACGGCCTTCCGGAAGAAGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR TCA 90 bp | CTGTGTGCTGGACTGCCAAGCTGGGTCTGTCCTTGGCGTGCTGTATaGGCTCCGAGTGGAGGGAGACAAGCTTCACCAAGATGCAGGTCC | + |
Preference number: 1 (lower is better) Translates to: LCAGLPSWVCPWRAV*APSGGRQASPRCRS Trigger: GGACCTGCATCTTGGTGAAGCTTGTCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGGACAGACCCAGCTTGGCAGTCCAGCACACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | CCATGTGTAAATCAGGCATGGCAGTGCATGCCTGCAGCCCAGTACTaGCAGGAGGTTCTTTGGGGCTCACTGGCCAGCCAGCTGAGCCAC | + |
Preference number: 1 (lower is better) Translates to: PCVNQAWQCMPAAQY*QEVLWGSLASQLSH Trigger: GTGGCTCAGCTGGCTGGCCAGTGAGCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGGCATGCACTGCCATGCCTGATTTACACATGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | CAGAGCCTTGACCCTGTCGTAGAGAATGCTGGAGGGCTCTGGCTGTaGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTGCCCTGGGGAC | + |
Preference number: 1 (lower is better) Translates to: QSLDPVVENAGGLWL*LWLRSSRKEVCPGD Trigger: GTCCCCAGGGCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACAGGGTCAAGGCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | TCAGCAGGGATGTTCTCAGCCTTCTGCTACTGCTCCCTGGGCCCTTaGCTAGCCCTGCAGAGCCACTGTAATGTGGCATTTGAAGAGGAC | + |
Preference number: 1 (lower is better) Translates to: SAGMFSAFCYCSLGP*LALQSHCNVAFEED Trigger: GTCCTCTTCAAATGCCACATTACAGTGGCTCTGCAGGGCTAGCCAAGGGCCCAGGGAGCAGTAGCAGAAGGCTGAGAACATCCCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | CTCTGTCAGCTGACCATGGTCCGTATGGACTGCATGGGCTGGCTATaGCCCTCAGGCATAGCTCCTTCCTCTAATGGTCTATCCTGTCAG | + |
Preference number: 1 (lower is better) Translates to: LCQLTMVRMDCMGWL*PSGIAPSSNGLSCQ Trigger: CTGACAGGATAGACCATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAGCTGACAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | GAGATACAGAGCCTTGACCCTGTCGTAGAGAATGCTGGAGGGCTCTaGCTGTGGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTGCCCT | + |
Preference number: 1 (lower is better) Translates to: EIQSLDPVVENAGGL*LWLWLRSSRKEVCP Trigger: AGGGCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACAGGGTCAAGGCTCTGTATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | CGCACTGAGCGGATGCTGTTAGACCTTCTACTTGAAGCAAACATGTaGGTACCTGATGGGAGGCAAGGATGGACTGAGGGGCCAGACCTG | + |
Preference number: 1 (lower is better) Translates to: RTERMLLDLLLEANM*VPDGRQGWTEGPDL Trigger: CAGGTCTGGCCCCTCAGTCCATCCTTGCCTCCCATCAGGTACTCACATGTTTGCTTCAAGTAGAAGGTCTAACAGCATCCGCTCAGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | ATCAAGCTCTGTCAGCTGACCATGGTCCGTATGGACTGCATGGGCTaGCTATGGCCCTCAGGCATAGCTCCTTCCTCTAATGGTCTATCC | + |
Preference number: 1 (lower is better) Translates to: IKLCQLTMVRMDCMG*LWPSGIAPSSNGLS Trigger: GGATAGACCATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAGCTGACAGAGCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | CAGTGTCTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTaGCCCAAAGGGGTGATCTATCTTCTGATCCTAGTGGCCTGGGCC | + |
Preference number: 1 (lower is better) Translates to: QCLWGRHQRSAKCFP*PKGVIYLLILVAWA Trigger: GGCCCAGGCCACTAGGATCAGAAGATAGATCACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAGACACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | CATTATGAGAGCCAGATGACTGCCCTGTCCCAGTGCTGCTGGACATaGTCATCTGCCTGCAGAATGTGTGGAGACTGCATTGCCGTGACA | + |
Preference number: 1 (lower is better) Translates to: HYESQMTALSQCCWT*SSACRMCGDCIAVT Trigger: TGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCATGTCCAGCAGCACTGGGACAGGGCAGTCATCTGGCTCTCATAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | GAGCCAGATGACTGCCCTGTCCCAGTGCTGCTGGACATGATCATCTaGCTGCAGAATGTGTGGAGACTGCATTGCCGTGACATATGCAAA | + |
Preference number: 1 (lower is better) Translates to: EPDDCPVPVLLDMII*LQNVWRLHCRDICK Trigger: TTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCATGTCCAGCAGCACTGGGACAGGGCAGTCATCTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | TGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCACCTTGTGTCTaGTACCCACCTAGGAGCAGTGTCTCTCTGAAGGAGAGTGGTTTC | + |
Preference number: 1 (lower is better) Translates to: WCLLSCCTAHPSPCV*YPPRSSVSLKESGF Trigger: GAAACCACTCTCCTTCAGAGAGACACTGCTCCTAGGTGGGTACCAGACACAAGGTGATGGATGAGCTGTGCAGCAGGACAGAAGACACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | AATGCAGTTGACTTAGCACCCGTGGCGCAGCCCCACGGCTTGAAATaGACCCTGCGAGGCTGTGTATCAGAGGGTATGTTGTTGACTATT | + |
Preference number: 1 (lower is better) Translates to: NAVDLAPVAQPHGLK*TLRGCVSEGMLLTI Trigger: AATAGTCAACAACATACCCTCTGATACACAGCCTCGCAGGGTTCATTTCAAGCCGTGGGGCTGCGCCACGGGTGCTAAGTCAACTGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 90 bp | CAGAAATCCACCTGCCTCTGCCTCTCAAGTGCTGGGATTAAGGCATaGGCCACCAATGCCTGGCTGTTTAATCCTAAGAAGGACTCTAGG | + |
Preference number: 1 (lower is better) Translates to: QKSTCLCLSSAGIKA*ATNAWLFNPKKDSR Trigger: CCTAGAGTCCTTCTTAGGATTAAACAGCCAGGCATTGGTGGCGCATGCCTTAATCCCAGCACTTGAGAGGCAGAGGCAGGTGGATTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | AGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTaGGAGAAGATGAAAACTGCTCTTGATTATGTCATGCCGAGCTCC | + |
Preference number: 1 (lower is better) Translates to: RLVACSLSLQLKRLV*EKMKTALDYVMPSS Trigger: GGAGCTCGGCATGACATAATCAAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | CATCTTGTTCTCTATCAGCTTACCGATCCGGGCCATCTCAGAGGCTaGAAAGTCCTCACCTTGGTCCAGGATCTTCCCCATGATCTTCAG | + |
Preference number: 1 (lower is better) Translates to: HLVLYQLTDPGHLRG*KVLTLVQDLPHDLQ Trigger: CTGAAGATCATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCAGCCTCTGAGATGGCCCGGATCGGTAAGCTGATAGAGAACAAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR TCA 90 bp | ATGGCTCACACTTCTGCCAACTATGTCGAGCACACTTGTATCTGCTaGGGAGTTCCAGTCCCCATCTGGCGGATCAAAAGCTGGGAGTTT | + |
Preference number: 1 (lower is better) Translates to: MAHTSANYVEHTCIC*GVPVPIWRIKSWEF Trigger: AAACTCCCAGCTTTTGATCCGCCAGATGGGGACTGGAACTCCTCAGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR TCA 90 bp | AATGCCTGGCTGTTTAATCCTAAGAAGGACTCTAGGCAGCCATTATaGGAGCCAGATGACTGCCCTGTCCCAGTGCTGCTGGACATGATC | + |
Preference number: 1 (lower is better) Translates to: NAWLFNPKKDSRQPL*EPDDCPVPVLLDMI Trigger: GATCATGTCCAGCAGCACTGGGACAGGGCAGTCATCTGGCTCTCATAATGGCTGCCTAGAGTCCTTCTTAGGATTAAACAGCCAGGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | AGCGCTCCCTTCACTTGCTTGTCTGGGGCAACTGAGCAGTTTGTGTaGTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGAGTCCATTAT | + |
Preference number: 1 (lower is better) Translates to: SAPFTCLSGATEQFV*SGNLVLDVFLGVHY Trigger: ATAATGGACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | CAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTGAATaGCTCACACTTCTGCCAACTATGTCGAGCACACTTGTATCTGCT | + |
Preference number: 1 (lower is better) Translates to: QVTLNGSLGKVEELE*LTLLPTMSSTLVSA Trigger: AGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | TTCCCTTGGCCCAAAGGGGTGATCTATCTTCTGATCCTAGTGGCCTaGGCCCACTCTGAAATGTTCTTCCCTGAGATTTGCTTGTGTTGT | + |
Preference number: 1 (lower is better) Translates to: FPWPKGVIYLLILVA*AHSEMFFPEICLCC Trigger: ACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGCCACTAGGATCAGAAGATAGATCACCCCTTTGGGCCAAGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | TTTCCAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTaGATGGCTCACACTTCTGCCAACTATGTCGAGCACACTTGTATC | + |
Preference number: 1 (lower is better) Translates to: FPGHFEWQSGESGGA*MAHTSANYVEHTCI Trigger: GATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | ATCCTAGTGGCCTGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTaGTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGC | + |
Preference number: 1 (lower is better) Translates to: ILVAWAHSEMFFPEI*LCCARTLCRTLYLG Trigger: GCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGCCACTAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | CCTGTCCCAGTGCTGCTGGACATGATCATCTGCCTGCAGAATGTGTaGAGACTGCATTGCCGTGACATATGCAAATCCCTTAAACACATT | + |
Preference number: 1 (lower is better) Translates to: PVPVLLDMIICLQNV*RLHCRDICKSLKHI Trigger: AATGTGTTTAAGGGATTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCATGTCCAGCAGCACTGGGACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | GTGGGCGTTTGCTTGCACTGCCCTGGCTCCTGGAATAATGTTTCTTaGGATATTCAAATTGTGCTGTGTGTTCACGGTCACAGATGCTCT | + |
Preference number: 1 (lower is better) Translates to: VGVCLHCPGSWNNVS*DIQIVLCVHGHRCS Trigger: AGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | AATTTTAATCTGAGTCACAGTACACTTGGGAGCGCTCCCTTCACTTaGTTGTCTGGGGCAACTGAGCAGTTTGTGTGCTCAGGAAACTTG | + |
Preference number: 1 (lower is better) Translates to: NFNLSHSTLGSAPFT*LSGATEQFVCSGNL Trigger: CAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAGATTAAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | GAGACAAGCTTCACCAAGATGCAGGTCCTTAGGCTCTTTGAGTGTTaGAAAATTGTTGGCCATTTCCAGAGCAGTCGTCTAAGAACTGGG | + |
Preference number: 1 (lower is better) Translates to: ETSFTKMQVLRLFEC*KIVGHFQSSRLRTG Trigger: CCCAGTTCTTAGACGACTGCTCTGGAAATGGCCAACAATTTTTCAACACTCAAAGAGCCTAAGGACCTGCATCTTGGTGAAGCTTGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | ATCTCACATATATTCCTGAGGTGTAAATCCTGTGTACCCTGGGCATaGGCCACTCTTGCAAAGATGGTTCACATTAATGGCCTCAGCTAC | + |
Preference number: 1 (lower is better) Translates to: ISHIFLRCKSCVPWA*ATLAKMVHINGLSY Trigger: GTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATATATGTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | GAAGAGGACTATCTCAGGCAGATGCACAAAAACTGCAGCCACTCCTaGTGTGTTGAGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCT | + |
Preference number: 1 (lower is better) Translates to: EEDYLRQMHKNCSHS*CVETVFFSWLSLVS Trigger: AGAAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 90 bp | CAAGCCATCCTGTCAGGACTCAGGGGTAGACTGCCACGGTCCTGTTaGTATCTCAAAAATGAAGAGACTACTTTGTTCTTTAGATTTAGC | + |
Preference number: 1 (lower is better) Translates to: QAILSGLRGRLPRSC*YLKNEETTLFFRFS Trigger: GCTAAATCTAAAGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTACCCCTGAGTCCTGACAGGATGGCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | AATGTGGCATTTGAAGAGGACTATCTCAGGCAGATGCACAAAAACTaGAGCCACTCCTGGTGTGTTGAGACTGTATTTTTCTCCTGGTTG | + |
Preference number: 1 (lower is better) Translates to: NVAFEEDYLRQMHKN*SHSWCVETVFFSWL Trigger: CAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTCAAATGCCACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 90 bp | TGTGTATCAGAGGGTATGTTGTTGACTATTGGCCTATTTTTCTCCTaGGCAAATTACTCAGGCATAGTGGAAATGGGGGCAGAGCAAGCA | + |
Preference number: 1 (lower is better) Translates to: CVSEGMLLTIGLFFS*ANYSGIVEMGAEQA Trigger: TGCTTGCTCTGCCCCCATTTCCACTATGCCTGAGTAATTTGCCCAGGAGAAAAATAGGCCAATAGTCAACAACATACCCTCTGATACACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | TTACTTCTTTGCTGTGGACGGATAGTCCTCTGTAGTATCTCCACATaGTGGAGAGTGCACAAACCTAGGTGTGCTGCCATCAATTTTGTA | + |
Preference number: 1 (lower is better) Translates to: LLLCCGRIVLCSIST*WRVHKPRCAAINFV Trigger: TACAAAATTGATGGCAGCACACCTAGGTTTGTGCACTCTCCATCATGTGGAGATACTACAGAGGACTATCCGTCCACAGCAAAGAAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR TCA 90 bp | GTGCATTTGAGAAGATCCCAGAGTTTATCGCTTTTAGGAACAGGCTaGATAATTCTCTCCATTTTGCACAAGTACGCACTGAGCGGATGC | + |
Preference number: 1 (lower is better) Translates to: VHLRRSQSLSLLGTG*IILSILHKYALSGC Trigger: GCATCCGCTCAGTGCGTACTTGTGCAAAATGGAGAGAATTATTCAGCCTGTTCCTAAAAGCGATAAACTCTGGGATCTTCTCAAATGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 90 bp | ACTGCCCTGGCTCCTGGAATAATGTTTCTTGGGATATTCAAATTGTaGTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCA | + |
Preference number: 1 (lower is better) Translates to: TALAPGIMFLGIFKL*CVFTVTDALNQALS Trigger: TGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | TGTAAGGAAATGTGTGCAAACTACTTTCTTACTTGTAGGATGTGCTaGAGCCTACATCATGGTTGCATCAGAGTATCACGTGCTCCATCC | + |
Preference number: 1 (lower is better) Translates to: CKEMCANYFLTCRMC*SLHHGCIRVSRAPS Trigger: GGATGGAGCACGTGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACATTTCCTTACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | AGCAGTGTCTCTCTGAAGGAGAGTGGTTTCATTTTGGGTGGGCTATaGTCGTGTGAGTATGGCATCCTTAGAATCTTTGAATATAGCACA | + |
Preference number: 1 (lower is better) Translates to: SSVSLKESGFILGGL*SCEYGILRIFEYST Trigger: TGTGCTATATTCAAAGATTCTAAGGATGCCATACTCACACGACCATAGCCCACCCAAAATGAAACCACTCTCCTTCAGAGAGACACTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 90 bp | CCACTCTTGCAAAGATGGTTCACATTAATGGCCTCAGCTACAGTGTaGTTTGCTTCAATTGAACACAGGGCATTTCATCTGCTTTGTTTC | + |
Preference number: 1 (lower is better) Translates to: PLLQRWFTLMASATV*FASIEHRAFHLLCF Trigger: GAAACAAAGCAGATGAAATGCCCTGTGTTCAATTGAAGCAAAGCACACTGTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | ACTTGTAAGGAAATGTGTGCAAACTACTTTCTTACTTGTAGGATGTaGTGGAGCCTACATCATGGTTGCATCAGAGTATCACGTGCTCCA | + |
Preference number: 1 (lower is better) Translates to: TCKEMCANYFLTCRM*WSLHHGCIRVSRAP Trigger: TGGAGCACGTGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACATTTCCTTACAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 90 bp | AGGAAGATGATGTTCCATGGGAAGATTTGCGAGACAACAGAGACTTaGATGTTTTCTTCAGTTGGGATCCAAAAGACAGGTAAGAGGAAC | + |
Preference number: 1 (lower is better) Translates to: RKMMFHGKICETTET*MFSSVGIQKTGKRN Trigger: GTTCCTCTTACCTGTCTTTTGGATCCCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTCGCAAATCTTCCCATGGAACATCATCTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | GAGTGTTGCTTACATTGCCTGACCAAGGGAGTATTTATACCAAGGTaGTGTCTTTCCTCCTCAGACCTCAGAATACATTATTCAAGCTTA | + |
Preference number: 1 (lower is better) Translates to: ECCLHCLTKGVFIPR*CLSSSDLRIHYSSL Trigger: TAAGCTTGAATAATGTATTCTGAGGTCTGAGGAGGAAAGACATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAAGCAACACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 90 bp | TTGAAAAAGGTATGTTTTATAATGGGCCTGATGTTGGTGTCCTGTTaGCACTTAAGAACTGCATCAGGGTGTATTCATGTTGTTCACCTA | + |
Preference number: 1 (lower is better) Translates to: LKKVCFIMGLMLVSC*HLRTASGCIHVVHL Trigger: TAGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCCATTATAAAACATACCTTTTTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 90 bp | TTGTGGGAGAGTAACTTATATTTTACATGTTGGAACTGGAATGAATaGTCATGTGACTTTGCTTTTGACACAGTCTTATGTAGCACAGGC | + |
Preference number: 1 (lower is better) Translates to: LWESNLYFTCWNWNE*SCDFAFDTVLCSTG Trigger: GCCTGTGCTACATAAGACTGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAACATGTAAAATATAAGTTACTCTCCCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 90 bp | GGCATGGCAGTGCATGCCTGCAGCCCAGTACTGACAGGAGGTTCTTaGGGGCTCACTGGCCAGCCAGCTGAGCCACATGGTGAGGTCCAG | + |
Preference number: 2 (lower is better) Translates to: GMAVHACSPVLTGGS*GLTGQPAEPHGEVQ Trigger: CTGGACCTCACCATGTGGCTCAGCTGGCTGGCCAGTGAGCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGGCATGCACTGCCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | ATCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTTGTGCTaGGTCACAGCTCCTCCTTCTCAGCCTCCTTCTTCCGGAAGGCCG | + |
Preference number: 2 (lower is better) Translates to: ISPFLPLANPGEPLC*VTAPPSQPPSSGRP Trigger: CGGCCTTCCGGAAGAAGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR-3UTR TCA 90 bp | GGCCTCTTGATGAGGCATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACCCTTGGCGTGCTGTATaGGCTCCGAGTGGAGGGAGA | + |
Preference number: 2 (lower is better) Translates to: GLLMRHASVLSQAGSQSYPWRAV*APSGGR Trigger: TCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGG...GTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | CCTGCCCCTGGCAAACCCTGGGGAACCCTTGTGCTTGGTCACAGCTCCTCCTTCGGAAAGTCCTCACCTTaGTCCAGGATCTTCCCCATG | + |
Preference number: 2 (lower is better) Translates to: PAPGKPWGTLVLGHSSSFGKSSP*SRIFPM Trigger: CATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCC...GAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR-3UTR CCA 90 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCGATGGGAGGCAAGGATaGACTGAGGGGCCAGACCTG | + |
Preference number: 2 (lower is better) Translates to: CCKIKEKGWAWWCTPNPSDGRQG*TEGPDL Trigger: CAGGTCTGGCCCCTCAGTCCATCCTTGCCTCCCATC...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | ATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGGCAGGCACGGCTCCAACCTTAACTaGCCCATTGTACAGCACAGG | + |
Preference number: 2 (lower is better) Translates to: MLEALMNSPARASYAGRHGSNLN*PIVQHR Trigger: CCTGTGCTGTACAATGGGGCAGTTAAGGTTGGAGCC...GTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
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3UTR-3UTR CCA 90 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCCATCCCTCTGTGTGCTaGACTGCCAAGCTGGGTCTG | + |
Preference number: 2 (lower is better) Translates to: CCKIKEKGWAWWCTPNPSHPSVC*TAKLGL Trigger: CAGACCCAGCTTGGCAGTCCAGCACACAGAGGGATG...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCAATGTTCCCCATGCCTaGGACCACTCTGTGTGGCCC | + |
Preference number: 2 (lower is better) Translates to: CCKIKEKGWAWWCTPNPSNVPHA*DHSVWP Trigger: GGGCCACACAGAGTGGTCCCAGGCATGGGGAACATT...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCACTGCCTGGGGACATaGAAGACAGAAGCCATGGGA | + |
Preference number: 2 (lower is better) Translates to: FQDGLSGLYAGGLDELACHCLGT*KTEAMG Trigger: TCCCATGGCTTCTGTCTTTCATGTCCCCAGGCAGTG...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
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3UTR-3UTR TCA 90 bp | CTCACTGGCCAGCCAGCTGAGCCACATGGTGAGGTCCAGGTTCAGGGAGAAACCAACTTTTCGGCATGTTaGTGCCCACCAGTGATCCCA | + |
Preference number: 2 (lower is better) Translates to: LTGQPAEPHGEVQVQGETNFSAC*CPPVIP Trigger: TGGGATCACTGGTGGGCATCAACATGCCGAAAAGTT...GGTTTCTCCCTGAACCTGGACCTCACCATGTGGCTCAGCTGGCTGGCCAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | CGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACAGCTGGCCGAGGTGTCCGAGGCAAGGATGGACTaGGGGGCCAGACCTGATGTT | + |
Preference number: 2 (lower is better) Translates to: RPSLISPDTAGKQLAEVSEARMD*GARPDV Trigger: AACATCAGGTCTGGCCCCTCAGTCCATCCTTGCCTC...GGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | CGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGAAAGACAGAAGCCATaGGAACAGGTCTCTGACACC | + |
Preference number: 2 (lower is better) Translates to: RASMLEALMNSPARASYAERQKP*EQVSDT Trigger: GGTGTCAGAGACCTGTTCCCATGGCTTCTGTCTTTC...TGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
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3UTR-3UTR GCA 90 bp | TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCGGCTCCAACCTTAACTaGCCCATTGTACAGCACAGG | + |
Preference number: 2 (lower is better) Translates to: FQDGLSGLYAGGLDELACGSNLN*PIVQHR Trigger: CCTGTGCTGTACAATGGGGCAGTTAAGGTTGGAGCC...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
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3UTR-3UTR GCA 90 bp | CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCAAGGCCCAGTGCTGCTaGTGCTGTGGTTTATATGGG | + |
Preference number: 2 (lower is better) Translates to: HLRLVACSLSLQLKRLVCKAQCC*CCGLYG Trigger: CCCATATAAACCACAGCAGCAGCAGCACTGGGCCTT...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR GCA 90 bp | GGCCTCTTGATGAGGCATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACAAGGAATGTTCCCCATaGCTGGGACCACTCTGTGTG | + |
Preference number: 2 (lower is better) Translates to: GLLMRHASVLSQAGSQSYKECSP*LGPLCV Trigger: CACACAGAGTGGTCCCAGGCATGGGGAACATTCCTT...GTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCATACATGGGCGGCCATaGAAACGTAAGGCTGTGCCT | + |
Preference number: 2 (lower is better) Translates to: HLRLVACSLSLQLKRLVCIHGRP*KRKAVP Trigger: AGGCACAGCCTTACGTTTCCATGGCCGCCCATGTAT...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR CCA 90 bp | GAGGACAGGAAGACAGGGGAGATACAGAGCCTTGACCCTGTCGTAGAGAATGCTGGAGGGCTCTGGCTGTaGCTCTGGCTCAGATCTAGT | + |
Preference number: 2 (lower is better) Translates to: EDRKTGEIQSLDPVVENAGGLWL*LWLRSS Trigger: ACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCC...AGCATTCTCTACGACAGGGTCAAGGCTCTGTATCTCCCCTGTCTTCCTGTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCATGGGAACAGGTCTCTaGCACCAAAAAGTCCAGAGC | + |
Preference number: 2 (lower is better) Translates to: FQDGLSGLYAGGLDELACMGTGL*HQKVQS Trigger: GCTCTGGACTTTTTGGTGTCAGAGACCTGTTCCCAT...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
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3UTR-3UTR TCA 90 bp | TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCTCTCAGCCAGACGCTTaGACTCATCTTGCTTCTCTC | + |
Preference number: 2 (lower is better) Translates to: FQDGLSGLYAGGLDELACSQPDA*THLASL Trigger: GAGAGAAGCAAGATGAGTTCAAGCGTCTGGCTGAGA...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
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3UTR-3UTR TCA 90 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCAGAGGAACTCAGCAGTaGACAGTCACGGTGAATCCA | + |
Preference number: 2 (lower is better) Translates to: CCKIKEKGWAWWCTPNPSRGTQQ*TVTVNP Trigger: TGGATTCACCGTGACTGTTCACTGCTGAGTTCCTCT...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCGACTGGGTGGGCGTTTaGTTGCACTGCCCTGGCTCC | + |
Preference number: 2 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVDWVGV*LHCPGS Trigger: GGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTC...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR GCA 90 bp | GGACCAATCCGGGTGCTTACCCACTATCCTGCTGGTTTTCACTCGCTATGTAGTAGGCATGGCAGTGCATaGCTGCAGCCCAGTACTGAC | + |
Preference number: 2 (lower is better) Translates to: GPIRVLTHYPAGFHSLCSRHGSA*LQPSTD Trigger: GTCAGTACTGGGCTGCAGGCATGCACTGCCATGCCT...ACTACATAGCGAGTGAAAACCAGCAGGATAGTGGGTAAGCACCCGGATTGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | CGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGATAACAACACTGCCTaGGGACATGAAAGACAGAAG | + |
Preference number: 2 (lower is better) Translates to: RASMLEALMNSPARASYADNNTA*GHERQK Trigger: CTTCTGTCTTTCATGTCCCCAGGCAGTGTTGTTATC...TGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
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3UTR-3UTR CCA 90 bp | CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGTGTATGAGCTCCGAGTaGAGGGAGACAAGCTTCACC | + |
Preference number: 2 (lower is better) Translates to: LWGRHQRSAKCFPWPKGVCMSSE*RETSFT Trigger: GGTGAAGCTTGTCTCCCTCCACTCGGAGCTCATACA...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | TTGGGAGCGCTCCCTTCACTTGCTTGTCTGGGGCAACTGAGCAGTTaGTGTGCTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGAGTCC | + |
Preference number: 2 (lower is better) Translates to: LGALPSLACLGQLSS*CAQETWFLMSSSES Trigger: GGACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | TCTCTAGGTATACATAGTCGCACACATCTCTCCTCCCCGCCCCCAAGTCTAAGCACACGTGCTCACCGTTaGAATCAGAGAGCAGGGACA | + |
Preference number: 2 (lower is better) Translates to: SLGIHSRTHLSSPPPSLSTRAHR*NQRAGT Trigger: TGTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGT...GCTTAGACTTGGGGGCGGGGAGGAGAGATGTGTGCGACTATGTATACCTAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACCTTCTGGCTCAGGCCTaGATTGCTCCACTGCCCCTT | + |
Preference number: 2 (lower is better) Translates to: LCCVFTVTDALNQALSADLLAQA*IAPLPL Trigger: AAGGGGCAGTGGAGCAATGCAGGCCTGAGCCAGAAG...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR CCA 90 bp | TTTCATCTGCTTTGTTTCCAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGCGGGGCACAGACTTCTaGCTCAGGCCTGCATTGCTC | + |
Preference number: 2 (lower is better) Translates to: FHLLCFQVTLNGSLGKVERGTDF*LRPALL Trigger: GAGCAATGCAGGCCTGAGCCAGAAGTCTGTGCCCCG...CTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGGAAACAAAGCAGATGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 90 bp | AGGAGCTTGAATGGCTCACACTTCTGCCAACTATGTCGAGCACACTaGTATCTGCTGAGGAGTTCCAGTCCCCATCTGGCGGATCAAAAG | + |
Preference number: 2 (lower is better) Translates to: RSLNGSHFCQLCRAH*YLLRSSSPHLADQK Trigger: CTTTTGATCCGCCAGATGGGGACTGGAACTCCTCAGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 90 bp | TCTGTAGTTGTGGCCTGTTTCCCATGGGACTGGGTGGGCGTTTGCTaGCACTGCCCTGGCTCCTGGAATAATGTTTCTTGGGATATTCAA | + |
Preference number: 2 (lower is better) Translates to: SVVVACFPWDWVGVC*HCPGSWNNVSWDIQ Trigger: TTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTCCCATGGGAAACAGGCCACAACTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 90 bp | CAGTCTGCCCAGAACCACCCAAGTCTTGTTTGCATCCTGGCTAGCTaGAAGTGTTTTCAAGCTGTAAGCTCCCATTGCAAGGGTTGGCAG | + |
Preference number: 2 (lower is better) Translates to: QSAQNHPSLVCILAS*KCFQAVSSHCKGWQ Trigger: CTGCCAACCCTTGCAATGGGAGCTTACAGCTTGAAAACACTTCAAGCTAGCCAGGATGCAAACAAGACTTGGGTGGTTCTGGGCAGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | CAGCTGGCAGGTAGATCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTCTCAAAACTGAACTCTaGTCACAGGCTAAAAGTATT | + |
Preference number: 2 (lower is better) Translates to: QLAGRSLLSCPWQTLGNPLKTEL*SQAKSI Trigger: AATACTTTTAGCCTGTGATCAGAGTTCAGTTTTGAG...AGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGATCTACCTGCCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR TCA 90 bp | AGATGCCATGACTTGTCTTGGTTCCATTTGCCCTCATCTGAGACCATGTTTTCTCCTGCAGCCCAGTACTaGCAGGAGGTTCTTTGGGGC | + |
Preference number: 2 (lower is better) Translates to: RCHDLSWFHLPSSETMFSPAAQY*QEVLWG Trigger: GCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGG...AGAAAACATGGTCTCAGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCTCTTGCAGAATAGAGTaGACAACAGCAGCTTACACT | + |
Preference number: 2 (lower is better) Translates to: HLRLVACSLSLQLKRLVCSCRIE*TTAAYT Trigger: AGTGTAAGCTGCTGTTGTGCACTCTATTCTGCAAGA...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR GCA 90 bp | CGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACAGCTGGCCGAGGTGTCCTTCTTCCCTGAGATTTaGTTGTGTTGTGCCAGGACT | + |
Preference number: 2 (lower is better) Translates to: RPSLISPDTAGKQLAEVSFFPEI*LCCART Trigger: AGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAA...GGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | GCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCTGCAGCATCTCATCTGTGTAAATCAGGCATaGCAGTGCATGCCTGCAGCC | + |
Preference number: 2 (lower is better) Translates to: ARTLCRTLYLGSALQHLICVNQA*QCMPAA Trigger: GGCTGCAGGCATGCACTGCCATGCCTGATTTACACA...GATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | CACTTAAGAACTGCATCAGGGTGTATTCATGTTGTTCACCTAAGGTaGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGC | + |
Preference number: 2 (lower is better) Translates to: HLRTASGCIHVVHLR*VACSLSLQLKRLVC Trigger: GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR TCA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCATTATGAGAGCCAGATaGCTGCCCTGTCCCAGTGCT | + |
Preference number: 2 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVIMRAR*LPCPSA Trigger: AGCACTGGGACAGGGCAGTCATCTGGCTCTCATAAT...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR TCA 90 bp | TTTGCTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCGCTCATCAGCCACTGTaGGAGCAGCTCCACTCTTCT | + |
Preference number: 2 (lower is better) Translates to: FACVVPGLCVELSILALLAHQPL*EQLHSS Trigger: AGAAGAGTGGAGCTGCTCTCACAGTGGCTGATGAGC...GAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCTCAGCTTATGCTAGGTaGCCAGCAGTTTTGTTTAAA | + |
Preference number: 2 (lower is better) Translates to: CCKIKEKGWAWWCTPNPSSAYAR*PAVLFK Trigger: TTTAAACAAAACTGCTGGTCACCTAGCATAAGCTGA...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGTGTAGTGAGATGCCATaGCTTGTCTTGGTTCCATTT | + |
Preference number: 2 (lower is better) Translates to: LWGRHQRSAKCFPWPKGVCSEMP*LVLVPF Trigger: AAATGGAACCAAGACAAGTCATGGCATCTCACTACA...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACATGCTCAAGGCCCAGTaGTGCTGCTGCTGTGGTTTA | + |
Preference number: 2 (lower is better) Translates to: LCCVFTVTDALNQALSADMLKAQ*CCCCGL Trigger: TAAACCACAGCAGCAGCAGCACTGGGCCTTGAGCAT...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR CCA 90 bp | TTTGCTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCTGTCGTAGAGAATGCTaGAGGGCTCTGGCTGTGGCT | + |
Preference number: 2 (lower is better) Translates to: FACVVPGLCVELSILALLCRREC*RALAVA Trigger: AGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACA...GAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | TTTAATCTGAGTCACAGTACACTTGGGAGCGCTCCCTTCACTTGCTaGTCTGGGGCAACTGAGCAGTTTGTGTGCTCAGGAAACTTGGTT | + |
Preference number: 2 (lower is better) Translates to: FNLSHSTLGSAPFTC*SGATEQFVCSGNLV Trigger: AACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAGATTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | CTAGTGGCCTGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTGCTaGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCT | + |
Preference number: 2 (lower is better) Translates to: LVAWAHSEMFFPEIC*CCARTLCRTLYLGS Trigger: AGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGCCACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCTATATTCTTACTGAGTaGACGCCTCCTCTCCCCACG | + |
Preference number: 2 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVYILTE*TPPLPT Trigger: CGTGGGGAGAGGAGGCGTTCACTCAGTAAGAATATA...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR TCA 90 bp | GGTAAGGGTGTGAGTTCTGATCCCCAACATCCATGTGTAAATCAGGCATGGCAGGAGGCCCTGTGTCAGTaGGAGAAAAACCAAACTTTC | + |
Preference number: 2 (lower is better) Translates to: GKGVSSDPQHPCVNQAWQEALCQ*EKNQTF Trigger: GAAAGTTTGGTTTTTCTCTCACTGACACAGGGCCTC...CTGCCATGCCTGATTTACACATGGATGTTGGGGATCAGAACTCACACCCTTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CCA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCCCAGGTCACTTTGAATaGCAGTCTGGGGAAAGTGGA | + |
Preference number: 2 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVPGHFE*QSGESG Trigger: TCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGG...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CCA 90 bp | TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTGCACTGCAGGTACACTaGATATACAAACATGCAGGC | + |
Preference number: 2 (lower is better) Translates to: SLSLQLKRLVCEKMKTALALQVH*IYKHAG Trigger: GCCTGCATGTTTGTATATCCAGTGTACCTGCAGTGC...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CCA 90 bp | TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTCACTGCCCTGGCTCCTaGAATAATGTTTCTTGGGAT | + |
Preference number: 2 (lower is better) Translates to: SLSLQLKRLVCEKMKTALHCPGS*NNVSWD Trigger: ATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTG...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CAA 90 bp | TTGATTATGTCATGCCGAGCTCCGACAGCGCTTTCCGTGACTGTTTaGTGTCTGAATCTCCTCTCTCACTTCTGTTCTTGTTCCCTGTCA | + |
Preference number: 2 (lower is better) Translates to: LIMSCRAPTALSVTV*CLNLLSHFCSCSLS Trigger: TGACAGGGAACAAGAACAGAAGTGAGAGAGGAGATTCAGACACAAAACAGTCACGGAAAGCGCTGTCGGAGCTCGGCATGACATAATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CAA 90 bp | TACCCACCTAGGAGCAGTGTCTCTCTGAAGGAGAGTGGTTTCATTTaGGGTGGGCTATGGTCGTGTGAGTATGGCATCCTTAGAATCTTT | + |
Preference number: 2 (lower is better) Translates to: YPPRSSVSLKESGFI*GGLWSCEYGILRIF Trigger: AAAGATTCTAAGGATGCCATACTCACACGACCATAGCCCACCCAAAATGAAACCACTCTCCTTCAGAGAGACACTGCTCCTAGGTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CAA 90 bp | ATGTCTTCCTCGGAGTCCATTATGACAGTCCTATTGGTGTCTTGTTaGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCACCTTGTGT | + |
Preference number: 2 (lower is better) Translates to: MSSSESIMTVLLVSC*VSSVLLHSSSITLC Trigger: ACACAAGGTGATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGACTGTCATAATGGACTCCGAGGAAGACAT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR TCA 90 bp | GAGGACAGGAAGACAGGGGAGATACAGAGCCTTGACCCTGTCGTAGAGAATGCTAGGCTCTTTGAGTGTTaGAAAATTGTTGGCCATTTC | + |
Preference number: 2 (lower is better) Translates to: EDRKTGEIQSLDPVVENARLFEC*KIVGHF Trigger: GAAATGGCCAACAATTTTTCAACACTCAAAGAGCCT...AGCATTCTCTACGACAGGGTCAAGGCTCTGTATCTCCCCTGTCTTCCTGTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CCA 90 bp | GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTCTCTTCTGGCCTCTATaGGCACTGCAGGTACACTGG | + |
Preference number: 2 (lower is better) Translates to: VDCHGPVAISKMKRLLCSLFWPL*ALQVHW Trigger: CCAGTGTACCTGCAGTGCCCATAGAGGCCAGAAGAG...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CCA 90 bp | GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTTGTGTACCCTGGGCATaGGCCACTCTTGCAAAGATG | + |
Preference number: 2 (lower is better) Translates to: VDCHGPVAISKMKRLLCSCVPWA*ATLAKM Trigger: CATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACA...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CCA 90 bp | GTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCGAGACAACAGAGACTTaGATGTTTTCTTCAGTTGGG | + |
Preference number: 2 (lower is better) Translates to: VLLVSCLVSSVLLHSSSIETTET*MFSSVG Trigger: CCCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTC...GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CAA 90 bp | TCTGAAATGTTCTTCCCTGAGATTTGCTTGTGTTGTGCCAGGACTTaGTGTAGAACTCTCTATCTTGGCTCTGCTCTGCAGCATCTCATC | + |
Preference number: 2 (lower is better) Translates to: SEMFFPEICLCCART*CRTLYLGSALQHLI Trigger: GATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CAA 90 bp | ACTATCTCAGGCAGATGCACAAAAACTGCAGCCACTCCTGGTGTGTaGAGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCTGTCATGT | + |
Preference number: 2 (lower is better) Translates to: TISGRCTKTAATPGV*RLYFSPGCPLFLSC Trigger: ACATGACAGAAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CCA 90 bp | AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAACAGGGGTCCCACAGCTaGCAGGTAGATCTCTCCTTT | + |
Preference number: 2 (lower is better) Translates to: KLELPKQCISSQFCTSPKQGSHS*QVDLSF Trigger: AAAGGAGAGATCTACCTGCCAGCTGTGGGACCCCTG...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CCA 90 bp | TTGTCTGTTTTCTCAAGTGAAGTTCTGTGGACTGCTCAGACACTGAGCTCCCATTGTGCTCAGGAAACTTaGTTCTTGATGTCTTCCTCG | + |
Preference number: 2 (lower is better) Translates to: LSVFSSEVLWTAQTLSSHCAQET*FLMSSS Trigger: CGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACA...ATGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | AAAGTCTTGGCTGTTGTGATAGAAGATCCTCTAGGTCCAATTGTCTaGAAAGACATGACTGCTAAGTCAGGACTGGAGATGGCAACTGCT | + |
Preference number: 2 (lower is better) Translates to: KVLAVVIEDPLGPIV*KDMTAKSGLEMATA Trigger: AGCAGTTGCCATCTCCAGTCCTGACTTAGCAGTCATGTCTTTCAAGACAATTGGACCTAGAGGATCTTCTATCACAACAGCCAAGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | ACTCCTATAGATCCAGCTTTAATTAATTACACATTATTTGGGGTTGTGCACAGCTCTCACCAGCCATCTTaGCTGAGCACACAGGCTCTC | + |
Preference number: 2 (lower is better) Translates to: TPIDPALINYTLFGVVHSSHQPS*LSTQAL Trigger: GAGAGCCTGTGTGCTCAGTCAAGATGGCTGGTGAGA...GCTGTGCACAACCCCAAATAATGTGTAATTAATTAAAGCTGGATCTATAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR GCA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCCGCATTGGCTTTCGGTaGATAAATTCTAAAGACAGT | + |
Preference number: 2 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVRIGFR*INSKDS Trigger: ACTGTCTTTAGAATTTATGCACCGAAAGCCAATGCG...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR CCA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACCAAATAATGTCATGGTaGGGTTACACTTCCTCTGTT | + |
Preference number: 2 (lower is better) Translates to: LCCVFTVTDALNQALSADQIMSW*GYTSSV Trigger: AACAGAGGAAGTGTAACCCCACCATGACATTATTTG...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 90 bp | GTCAGTCCTACACCCGCAGGATCACACATAATCTTTTTAATTTTCTaGTGTCCGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACA | + |
Preference number: 2 (lower is better) Translates to: VSPTPAGSHIIFLIF*CPSVFNLSRYCRQT Trigger: TGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACGGACACAAGAAAATTAAAAAGATTATGTGTGATCCTGCGGGTGTAGGACTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | ACTGAGCAGTTTGTGTGCTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGAGTCCTTTTAGGAACAGGCTaGATAATTCTCTCCATTTTG | + |
Preference number: 2 (lower is better) Translates to: TEQFVCSGNLVLDVFLGVLLGTG*IILSIL Trigger: CAAAATGGAGAGAATTATTCAGCCTGTTCCTAAAAG...GACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR TCA 90 bp | TTGTCTGTTTTCTCAAGTGAAGTTCTGTGGACTGCTCAGACACTGAGCTCCCATCAAATATGGTGCATTTaGGAAGATCCCAGAGTTTAT | + |
Preference number: 2 (lower is better) Translates to: LSVFSSEVLWTAQTLSSHQIWCI*EDPRVY Trigger: ATAAACTCTGGGATCTTCTCAAATGCACCATATTTG...ATGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | AGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCTGTCATGTAAAAGCTGTTGTGCTTACCCACTATCCTaGTGGTTTTCACTCGCTATG | + |
Preference number: 2 (lower is better) Translates to: RLYFSPGCPLFLSCKSCCAYPLS*WFSLAM Trigger: CATAGCGAGTGAAAACCAGCAGGATAGTGGGTAAGC...ACAACAGCTTTTACATGACAGAAACAAGGGACAACCAGGAGAAAAATACAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAACTGCCACGGTCCTGTTaGTATCTCAAAAATGAAGAG | + |
Preference number: 2 (lower is better) Translates to: KLELPKQCISSQFCTSPKLPRSC*YLKNEE Trigger: CTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAG...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR CCA 90 bp | TGGTGTAAGATTCCTGTTGGAATGACATTTGCCAAAGTCTTGGCTGTTGTGATAGTGTTGAAAAATTGTTaGCCATTTCCAGAGCAGTCG | + |
Preference number: 2 (lower is better) Translates to: WCKIPVGMTFAKVLAVVIVLKNC*PFPEQS Trigger: CGACTGCTCTGGAAATGGCCAACAATTTTTCAACAC...TATCACAACAGCCAAGACTTTGGCAAATGTCATTCCAACAGGAATCTTACACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 90 bp | AAAAGAATTTGCTTGCTCTATAGAGATAGGAAACATGATGCCCTGTaGCTTGTTCACATAAGGTCAGAGTATAGACTGCACCCTGTATCT | + |
Preference number: 2 (lower is better) Translates to: KRICLLYRDRKHDAL*LVHIRSEYRLHPVS Trigger: AGATACAGGGTGCAGTCTATACTCTGACCTTATGTGAACAAGCAACAGGGCATCATGTTTCCTATCTCTATAGAGCAAGCAAATTCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 90 bp | GTTGAAAAAGGTATGTTTTATAATGGGCCTGATGTTGGTGTCCTGTaGACACTTAAGAACTGCATCAGGGTGTATTCATGTTGTTCACCT | + |
Preference number: 2 (lower is better) Translates to: VEKGMFYNGPDVGVL*TLKNCIRVYSCCSP Trigger: AGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCCATTATAAAACATACCTTTTTCAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR-3UTR CCA 90 bp | AGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCTGTCATGTAAAAGCTGTTGTGAAGATGATGTTCCATaGGAAGATTTGCGAGACAAC | + |
Preference number: 2 (lower is better) Translates to: RLYFSPGCPLFLSCKSCCEDDVP*EDLRDN Trigger: GTTGTCTCGCAAATCTTCCCATGGAACATCATCTTC...ACAACAGCTTTTACATGACAGAAACAAGGGACAACCAGGAGAAAAATACAGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR GCA 90 bp | ACTCCTATAGATCCAGCTTTAATTAATTACACATTATTTGGGGTTGTGCACAGCTGGAACTGGAATGAATaGTCATGTGACTTTGCTTTT | + |
Preference number: 2 (lower is better) Translates to: TPIDPALINYTLFGVVHSWNWNE*SCDFAF Trigger: AAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCA...GCTGTGCACAACCCCAAATAATGTGTAATTAATTAAAGCTGGATCTATAGGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 72 bp | GGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATaGAGGCAGGCACCCAGGCATGCCCAGGTAGACCCC | + |
Preference number: 3 (lower is better) Translates to: GGLDELACQGIV*RQAPRHAQVDP Trigger: GGGGTCTACCTGGGCATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
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3UTR GCA 72 bp | TCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTaGCAGGGCATCGTATGCAGGCAGGCACCCAGGCAT | + |
Preference number: 3 (lower is better) Translates to: SGLYAGGLDELA*QGIVCRQAPRH Trigger: ATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
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3UTR GCA 72 bp | CAGGCTTCAGCAGGGATGTTCTCAGCCTTCTGCTACTaGTCCCTGGGCCCTTGGCTAGCCCTGCAGAGCCAC | + |
Preference number: 3 (lower is better) Translates to: QASAGMFSAFCY*SLGPWLALQSH Trigger: GTGGCTCTGCAGGGCTAGCCAAGGGCCCAGGGAGCAGTAGCAGAAGGCTGAGAACATCCCTGCTGAAGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 72 bp | CCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTTGTaGTTGGTCACAGCTCCTCCTTCTCAGCCTCCTTCT | + |
Preference number: 3 (lower is better) Translates to: PFLPLANPGEPL*LVTAPPSQPPS Trigger: AGAAGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR GCA 72 bp | GTGTGCTGGACTGCCAAGCTGGGTCTGTCCTTGGCGTaGTGTATGAGCTCCGAGTGGAGGGAGACAAGCTTC | + |
Preference number: 3 (lower is better) Translates to: VCWTAKLGLSLA*CMSSEWRETSF Trigger: GAAGCTTGTCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGGACAGACCCAGCTTGGCAGTCCAGCACAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 72 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTaGACGCCTAATCCCAGCACTCGGGAGGCAGAGGCA | + |
Preference number: 3 (lower is better) Translates to: CCKIKEKGWAWW*TPNPSTREAEA Trigger: TGCCTCTGCCTCCCGAGTGCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 72 bp | CCACAGCTGGCAGGTAGATCTCTCCTTTCCTGCCCCTaGCAAACCCTGGGGAACCCTTGTGCTTGGTCACAG | + |
Preference number: 3 (lower is better) Translates to: PQLAGRSLLSCP*QTLGNPCAWSQ Trigger: CTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGATCTACCTGCCAGCTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR TCA 72 bp | GACTTAGCACCCGTGGCGCAGCCCCACGGCTTGAAATaGACCCTGCGAGGCTGTGTATCAGAGGGTATGTTG | + |
Preference number: 3 (lower is better) Translates to: DLAPVAQPHGLK*TLRGCVSEGML Trigger: CAACATACCCTCTGATACACAGCCTCGCAGGGTTCATTTCAAGCCGTGGGGCTGCGCCACGGGTGCTAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 72 bp | CTGTGGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTaGCCTGGGGACCAATCCGGGTGCTTACCCACTATC | + |
Preference number: 3 (lower is better) Translates to: LWLWLRSSRKEV*PGDQSGCLPTI Trigger: GATAGTGGGTAAGCACCCGGATTGGTCCCCAGGGCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 72 bp | TTCTTGTGTCCGTCCGTCTTTAATCTCTCCAGATACTaGAGGCAAACAGCTGGCCGAGGTGTCCCCTGGGGG | + |
Preference number: 3 (lower is better) Translates to: FLCPSVFNLSRY*RQTAGRGVPWG Trigger: CCCCCAGGGGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACGGACACAAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 72 bp | CTGGGTCTGTCCTTGGCGTGCTGTATGAGCTCCGAGTaGAGGGAGACAAGCTTCACCAAGATGCAGGTCCTT | + |
Preference number: 3 (lower is better) Translates to: LGLSLACCMSSE*RETSFTKMQVL Trigger: AAGGACCTGCATCTTGGTGAAGCTTGTCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGGACAGACCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 72 bp | GACCCTGTCGTAGAGAATGCTGGAGGGCTCTGGCTGTaGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTGC | + |
Preference number: 3 (lower is better) Translates to: DPVVENAGGLWL*LWLRSSRKEVC Trigger: GCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACAGGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CAA 90 bp | CGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACAGCTGGCCGAGGTGTCCAACACGTGCTCACCGTaGGAATCAGAGAGCAGGGAC | + |
Preference number: 3 (lower is better) Translates to: RPSLISPDTAGKQLAEVSNTCSP*ESESRD Trigger: GTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGTT...GGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CAA 90 bp | CTCACTGGCCAGCCAGCTGAGCCACATGGTGAGGTCCAGGTTCAGGGAGAAACCGTTCCATGGGAAGATTaGCGAGACAACAGAGACTTG | + |
Preference number: 3 (lower is better) Translates to: LTGQPAEPHGEVQVQGETVPWED*RDNRDL Trigger: CAAGTCTCTGTTGTCTCGCAAATCTTCCCATGGAAC...GGTTTCTCCCTGAACCTGGACCTCACCATGTGGCTCAGCTGGCTGGCCAGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR-3UTR CAA 90 bp | GGCCTCTTGATGAGGCATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACGCTTGCTGGCGAGTGTaGCTTACATTGCCTGACCAA | + |
Preference number: 3 (lower is better) Translates to: GLLMRHASVLSQAGSQSYACWRV*LTLPDQ Trigger: TTGGTCAGGCAATGTAAGCAACACTCGCCAGCAAGC...GTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR TCA 72 bp | CTGATGGGAGGCAAGGATGGACTGAGGGGCCAGACCTaGTGTTCATGGCTGTCAGTAGCACGGTTAAGGGAA | + |
Preference number: 3 (lower is better) Translates to: LMGGKDGLRGQT*CSWLSVARLRE Trigger: TTCCCTTAACCGTGCTACTGACAGCCATGAACATCAGGTCTGGCCCCTCAGTCCATCCTTGCCTCCCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | CTCTATCAGCTTACCGATCCGGGCCATCTCAGAGGCTaGAAAGTCCTCACCTTGGTCCAGGATCTTCCCCAT | + |
Preference number: 3 (lower is better) Translates to: LYQLTDPGHLRG*KVLTLVQDLPH Trigger: ATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCAGCCTCTGAGATGGCCCGGATCGGTAAGCTGATAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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3UTR CCA 72 bp | CTGACCATGGTCCGTATGGACTGCATGGGCTGGCTATaGCCCTCAGGCATAGCTCCTTCCTCTAATGGTCTA | + |
Preference number: 3 (lower is better) Translates to: LTMVRMDCMGWL*PSGIAPSSNGL Trigger: TAGACCATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CCA 72 bp | TGTCAGCTGACCATGGTCCGTATGGACTGCATGGGCTaGCTATGGCCCTCAGGCATAGCTCCTTCCTCTAAT | + |
Preference number: 3 (lower is better) Translates to: CQLTMVRMDCMG*LWPSGIAPSSN Trigger: ATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAGCTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CCA 72 bp | CTGTCCTGCTGCACAGCTCATCCATCACCTTGTGTCTaGTACCCACCTAGGAGCAGTGTCTCTCTGAAGGAG | + |
Preference number: 3 (lower is better) Translates to: LSCCTAHPSPCV*YPPRSSVSLKE Trigger: CTCCTTCAGAGAGACACTGCTCCTAGGTGGGTACCAGACACAAGGTGATGGATGAGCTGTGCAGCAGGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | CTGAGTCACAGTACACTTGGGAGCGCTCCCTTCACTTaGTTGTCTGGGGCAACTGAGCAGTTTGTGTGCTCA | + |
Preference number: 3 (lower is better) Translates to: LSHSTLGSAPFT*LSGATEQFVCS Trigger: TGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CAA 90 bp | CATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACACCCGCAGGATCACATTCCCTGAGATTTGCTaGTGTTGTGCCAGGACTTTG | + |
Preference number: 3 (lower is better) Translates to: HASVLSQAGSQSYTRRITFPEIC*CCARTL Trigger: CAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAA...TGTGATCCTGCGGGTGTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | GAGAATCCAGCACCCTCTTCTGGCCTCTATGGGCACTaGAGGTACACTGGATATACAAACATGCAGGCAAGC | + |
Preference number: 3 (lower is better) Translates to: ENPAPSSGLYGH*RYTGYTNMQAS Trigger: GCTTGCCTGCATGTTTGTATATCCAGTGTACCTGCAGTGCCCATAGAGGCCAGAAGAGGGTGCTGGATTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | GAGCCCAAGCCATCCTGTCAGGACTCAGGGGTAGACTaGCACGGTCCTGTTGCTATCTCAAAAATGAAGAGA | + |
Preference number: 3 (lower is better) Translates to: EPKPSCQDSGVD*HGPVAISKMKR Trigger: TCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTACCCCTGAGTCCTGACAGGATGGCTTGGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | ACCTGCCTCTGCCTCTCAAGTGCTGGGATTAAGGCATaGGCCACCAATGCCTGGCTGTTTAATCCTAAGAAG | + |
Preference number: 3 (lower is better) Translates to: TCLCLSSAGIKA*ATNAWLFNPKK Trigger: CTTCTTAGGATTAAACAGCCAGGCATTGGTGGCGCATGCCTTAATCCCAGCACTTGAGAGGCAGAGGCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | AGAAGTCTGACTAAGTGTGGGCCTCTTGATGAGGCATaGCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTA | + |
Preference number: 3 (lower is better) Translates to: RSLTKCGPLDEA*QCPQSSWQSVL Trigger: TAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCCCACACTTAGTCAGACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | ACTGCTCAGACACTGAGCTCCCATTTTAGGGAAGGCTaGTCTCATGTTGGAACTGCAGTCTGCCCAGAACCA | + |
Preference number: 3 (lower is better) Translates to: TAQTLSSHFREG*SHVGTAVCPEP Trigger: TGGTTCTGGGCAGACTGCAGTTCCAACATGAGACCAGCCTTCCCTAAAATGGGAGCTCAGTGTCTGAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CAA 90 bp | TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTATCTCACCAGCCATCTaGACTGAGCACACAGGCTCT | + |
Preference number: 3 (lower is better) Translates to: SLSLQLKRLVCEKMKTALISPAI*TEHTGS Trigger: AGAGCCTGTGTGCTCAGTCAAGATGGCTGGTGAGAT...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR TCA 72 bp | CACTTTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTaGATGGCTCACACTTCTGCCAACTATGTCGAGCAC | + |
Preference number: 3 (lower is better) Translates to: HFEWQSGESGGA*MAHTSANYVEH Trigger: GTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR TCA 72 bp | CTGTTTAATCCTAAGAAGGACTCTAGGCAGCCATTATaGGAGCCAGATGACTGCCCTGTCCCAGTGCTGCTG | + |
Preference number: 3 (lower is better) Translates to: LFNPKKDSRQPL*EPDDCPVPVLL Trigger: CAGCAGCACTGGGACAGGGCAGTCATCTGGCTCTCATAATGGCTGCCTAGAGTCCTTCTTAGGATTAAACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR TCA 72 bp | CGGATGCTGTTAGACCTTCTACTTGAAGCAAACATGTaGGTACCTGATGGGAGGCAAGGATGGACTGAGGGG | + |
Preference number: 3 (lower is better) Translates to: RMLLDLLLEANM*VPDGRQGWTEG Trigger: CCCCTCAGTCCATCCTTGCCTCCCATCAGGTACTCACATGTTTGCTTCAAGTAGAAGGTCTAACAGCATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | CACTCAGGGTTCATTTTTAGGGATTCTTCTGGTGTCTaGCCGGGAGTAGGTGTGGATGCATGCTCTGGCAGT | + |
Preference number: 3 (lower is better) Translates to: HSGFIFRDSSGV*PGVGVDACSGS Trigger: ACTGCCAGAGCATGCATCCACACCTACTCCCGGTCAGACACCAGAAGAATCCCTAAAAATGAACCCTGAGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | TGTTTCCCATGGGACTGGGTGGGCGTTTGCTTGCACTaGCCTGGCTCCTGGAATAATGTTTCTTGGGATATT | + |
Preference number: 3 (lower is better) Translates to: CFPWDWVGVCLH*PGSWNNVSWDI Trigger: AATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTCCCATGGGAAACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | CAGTGTCTTTGGGGCAGACATCAGCGTTCAGCTAAATaGTTCCCTTGGCCCAAAGGGGTGATCTATCTTCTG | + |
Preference number: 3 (lower is better) Translates to: QCLWGRHQRSAK*FPWPKGVIYLL Trigger: CAGAAGATAGATCACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAGACACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | CCTGTGTACCCTGGGCATGGGCCACTCTTGCAAAGATaGTTCACATTAATGGCCTCAGCTACAGTGTGCTTT | + |
Preference number: 3 (lower is better) Translates to: PVYPGHGPLLQR*FTLMASATVCF Trigger: AAAGCACACTGTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACGGAAAGTGGAGGAGCTaGAATGGCTCACACTTCTGC | + |
Preference number: 3 (lower is better) Translates to: LCCVFTVTDALNQALSADGKWRS*NGSHFC Trigger: GCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCC...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | CAGTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTaGTGCACAGCTCATCCATCACCTTGTGTCTGGTAC | + |
Preference number: 3 (lower is better) Translates to: QSYWCLVWCLLS*CTAHPSPCVWY Trigger: GTACCAGACACAAGGTGATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | GCCTGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTaGTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTC | + |
Preference number: 3 (lower is better) Translates to: AWAHSEMFFPEI*LCCARTLCRTL Trigger: GAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | AACAACACTGCCTGGGGACATGAAAGACAGAAGCCATaGGAACAGGTCTCTGACACCAAAAAGTCCAGAGCT | + |
Preference number: 3 (lower is better) Translates to: NNTAWGHERQKP*EQVSDTKKSRA Trigger: AGCTCTGGACTTTTTGGTGTCAGAGACCTGTTCCCATGGCTTCTGTCTTTCATGTCCCCAGGCAGTGTTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
||
3UTR CCA 72 bp | TTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTGAATaGCTCACACTTCTGCCAACTATGTCGAGCACACTT | + |
Preference number: 3 (lower is better) Translates to: LNGSLGKVEELE*LTLLPTMSSTL Trigger: AAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CCA 72 bp | GACTGGGTGGGCGTTTGCTTGCACTGCCCTGGCTCCTaGAATAATGTTTCTTGGGATATTCAAATTGTGCTG | + |
Preference number: 3 (lower is better) Translates to: DWVGVCLHCPGS*NNVSWDIQIVL Trigger: CAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCTTATCTGCAGGTTTGTaGAGACTCTTCCTACTTTTT | + |
Preference number: 3 (lower is better) Translates to: HLRLVACSLSLQLKRLVCLSAGL*RLFLLF Trigger: AAAAAGTAGGAAGAGTCTCAACAAACCTGCAGATAA...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTGCCTTGAACACCACCTaGTGGTACTGTTCTGTAGTT | + |
Preference number: 3 (lower is better) Translates to: SLSLQLKRLVCEKMKTALALNTT*WYCSVV Trigger: AACTACAGAACAGTACCACAAGGTGGTGTTCAAGGC...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | TTGTCTGTTTTCTCAAGTGAAGTTCTGTGGACTGCTCAGACACTGAGCTCCCATGGGCAACTGAGCAGTTaGTGTGCTCAGGAAACTTGG | + |
Preference number: 3 (lower is better) Translates to: LSVFSSEVLWTAQTLSSHGQLSS*CAQETW Trigger: CCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCC...ATGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | CTCCAGAGACTGACTAGGCCAGCCTTGCTTCTAGTTTaGATGGTTAGCTTGCTGGCGAGTGTTGCTTACATT | + |
Preference number: 3 (lower is better) Translates to: LQRLTRPALLLV*MVSLLASVAYI Trigger: AATGTAAGCAACACTCGCCAGCAAGCTAACCATTCAAACTAGAAGCAAGGCTGGCCTAGTCAGTCTCTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR GCA 72 bp | GCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTaGGAGAAGATGAAAACTGCTCTTGATTATGTCATG | + |
Preference number: 3 (lower is better) Translates to: ACSLSLQLKRLV*EKMKTALDYVM Trigger: CATGACATAATCAAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | TTCACTTGCTTGTCTGGGGCAACTGAGCAGTTTGTGTaGTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGA | + |
Preference number: 3 (lower is better) Translates to: FTCLSGATEQFV*SGNLVLDVFLG Trigger: TCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CAA 90 bp | TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTCCTCCACTGGTCTTGTaGACAAATAATGTCATGGTG | + |
Preference number: 3 (lower is better) Translates to: SLSLQLKRLVCEKMKTALPPLVL*TNNVMV Trigger: CACCATGACATTATTTGTCAACAAGACCAGTGGAGG...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACGTTCAAGTTACTTCTTaGCTGTGGACGGATAGTCCT | + |
Preference number: 3 (lower is better) Translates to: LCCVFTVTDALNQALSADVQVTS*LWTDSP Trigger: AGGACTATCCGTCCACAGCAAAGAAGTAACTTGAAC...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | GGACCAATCCGGGTGCTTACCCACTATCCTGCTGGTTTTCACTCGCTATGTAGTAGGTCCTTAGGCTCTTaGAGTGTTGAAAAATTGTTG | + |
Preference number: 3 (lower is better) Translates to: GPIRVLTHYPAGFHSLCSRSLGS*SVEKLL Trigger: CAACAATTTTTCAACACTCAAAGAGCCTAAGGACCT...ACTACATAGCGAGTGAAAACCAGCAGGATAGTGGGTAAGCACCCGGATTGGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | CTCTGCTCTGCAGCATCTCATCCGATAATTTTAATCTaGGTCACAGTACACTTGGGAGCGCTCCCTTCACTT | + |
Preference number: 3 (lower is better) Translates to: LCSAASHPIILI*VTVHLGALPSL Trigger: AAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAGATTAAAATTATCGGATGAGATGCTGCAGAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | GCAGATGCACAAAAACTGCAGCCACTCCTGGTGTGTTaGGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTC | + |
Preference number: 3 (lower is better) Translates to: ADAQKLQPLLVC*DCIFLLVVPCF Trigger: GAAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | CAAAACGTTAGGAAGATTCCTTTATACACAAACACGTaGTCACCGTTGGAATCAGAGAGCAGGGACACAGCC | + |
Preference number: 3 (lower is better) Translates to: QNVRKIPLYTNT*SPLESESRDTA Trigger: GGCTGTGTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGTTTGTGTATAAAGGAATCTTCCTAACGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | GTAATGTGGCATTTGAAGAGGACTATCTCAGGCAGATaGACAAAAACTGCAGCCACTCCTGGTGTGTTGAGA | + |
Preference number: 3 (lower is better) Translates to: VMWHLKRTISGR*TKTAATPGVLR Trigger: TCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTCAAATGCCACATTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | ATATTCCTGAGGTGTAAATCCTGTGTACCCTGGGCATaGGCCACTCTTGCAAAGATGGTTCACATTAATGGC | + |
Preference number: 3 (lower is better) Translates to: IFLRCKSCVPWA*ATLAKMVHING Trigger: GCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CCA 72 bp | TGCTTGCACTGCCCTGGCTCCTGGAATAATGTTTCTTaGGATATTCAAATTGTGCTGTGTGTTCACGGTCAC | + |
Preference number: 3 (lower is better) Translates to: CLHCPGSWNNVS*DIQIVLCVHGH Trigger: GTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CCA 72 bp | TATCTCAGGCAGATGCACAAAAACTGCAGCCACTCCTaGTGTGTTGAGACTGTATTTTTCTCCTGGTTGTCC | + |
Preference number: 3 (lower is better) Translates to: YLRQMHKNCSHS*CVETVFFSWLS Trigger: GGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CAA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCGGCATTTCATCTGCTTaGTTTCCAGGTCACTTTGAA | + |
Preference number: 3 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVGISSA*FPGHFE Trigger: TTCAAAGTGACCTGGAAACAAAGCAGATGAAATGCC...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | GTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCACATTTGCCAAAGTCTaGGCTGTTGTGATAGAAGAT | + |
Preference number: 3 (lower is better) Translates to: VLLVSCLVSSVLLHSSSITFAKV*AVVIED Trigger: ATCTTCTATCACAACAGCCAAGACTTTGGCAAATGT...GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | GAACCCTGCGAGGCTGTGTATCAGAGGGTATGTTGTTaGCTATTGGCCTATTTTTCTCCTGGGCAAATTACT | + |
Preference number: 3 (lower is better) Translates to: EPCEAVYQRVCC*LLAYFSPGQIT Trigger: AGTAATTTGCCCAGGAGAAAAATAGGCCAATAGTCAACAACATACCCTCTGATACACAGCCTCGCAGGGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | TGGTCTTTCCCATGGACTGCTCCAGCAGCACACCATTaGATTCTTTATCGTAACTGTCTGGGATTCACAAAT | + |
Preference number: 3 (lower is better) Translates to: WSFPWTAPAAHH*ILYRNCLGFTN Trigger: ATTTGTGAATCCCAGACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | GGGCCTGATGTTGGTGTCCTGTTGACACTTAAGAACTaGATCAGGGTGTATTCATGTTGTTCACCTAAGGTT | + |
Preference number: 3 (lower is better) Translates to: GPDVGVLLTLKN*IRVYSCCSPKV Trigger: AACCTTAGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | ACTATCCTGCTGGTTTTCACTCGCTATGTAGTGAGATaGCATGACTTGTCTTGGTTCCATTTGCCCTCATCT | + |
Preference number: 3 (lower is better) Translates to: TILLVFTRYVVR*HDLSWFHLPSS Trigger: AGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCTCACTACATAGCGAGTGAAAACCAGCAGGATAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | TCACATATATTCCTGAGGTGTAAATCCTGTGTACCCTaGGCATGGGCCACTCTTGCAAAGATGGTTCACATT | + |
Preference number: 3 (lower is better) Translates to: SHIFLRCKSCVP*AWATLAKMVHI Trigger: AATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATATATGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | GTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCGCATCCTTAGAATCTTaGAATATAGCACAGTTTGTC | + |
Preference number: 3 (lower is better) Translates to: VLLVSCLVSSVLLHSSSIASLES*NIAQFV Trigger: GACAAACTGTGCTATATTCAAAGATTCTAAGGATGC...GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | TTCACCAAGATGCAGGTCCTTAGGCTCTTTGAGTGTTaGAAAATTGTTGGCCATTTCCAGAGCAGTCGTCTA | + |
Preference number: 3 (lower is better) Translates to: FTKMQVLRLFEC*KIVGHFQSSRL Trigger: TAGACGACTGCTCTGGAAATGGCCAACAATTTTTCAACACTCAAAGAGCCTAAGGACCTGCATCTTGGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | ATGGTTAGCTTGCTGGCGAGTGTTGCTTACATTGCCTaGCCAAGGGAGTATTTATACCAAGGTGATGTCTTT | + |
Preference number: 3 (lower is better) Translates to: MVSLLASVAYIA*PREYLYQGDVF Trigger: AAAGACATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAAGCAACACTCGCCAGCAAGCTAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | TTCTGTCATGTAAAAGCTGTTGTCTGTTTTCTCAAGTaGAGTTCTGTGGACTGCTCAGACACTGAGCTCCCA | + |
Preference number: 3 (lower is better) Translates to: FCHVKAVVCFLK*SSVDCSDTELP Trigger: TGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAACAGCTTTTACATGACAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | ATGATCATCTGCCTGCAGAATGTGTGGAGACTGCATTaGCGTGACATATGCAAATCCCTTAAACACATTCAG | + |
Preference number: 3 (lower is better) Translates to: MIICLQNVWRLH*RDICKSLKHIQ Trigger: CTGAATGTGTTTAAGGGATTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | TTTGAAGAGGACTATCTCAGGCAGATGCACAAAAACTaGAGCCACTCCTGGTGTGTTGAGACTGTATTTTTC | + |
Preference number: 3 (lower is better) Translates to: FEEDYLRQMHKN*SHSWCVETVFF Trigger: GAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | CCTTGGTTTTTCATTTTTAAGGATAACAACACTGCCTaGGGACATGAAAGACAGAAGCCATGGGAACAGGTC | + |
Preference number: 3 (lower is better) Translates to: PWFFIFKDNNTA*GHERQKPWEQV Trigger: GACCTGTTCCCATGGCTTCTGTCTTTCATGTCCCCAGGCAGTGTTGTTATCCTTAAAAATGAAAAACCAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
||
3UTR CCA 72 bp | TTCACTCGCTATGTAGTGAGATGCCATGACTTGTCTTaGTTCCATTTGCCCTCATCTGAGACCATGTTTTCT | + |
Preference number: 3 (lower is better) Translates to: FTRYVVRCHDLS*FHLPSSETMFS Trigger: AGAAAACATGGTCTCAGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCTCACTACATAGCGAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR CCA 72 bp | TCTCTGAAGGAGAGTGGTTTCATTTTGGGTGGGCTATaGTCGTGTGAGTATGGCATCCTTAGAATCTTTGAA | + |
Preference number: 3 (lower is better) Translates to: SLKESGFILGGL*SCEYGILRIFE Trigger: TTCAAAGATTCTAAGGATGCCATACTCACACGACCATAGCCCACCCAAAATGAAACCACTCTCCTTCAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | TTCCCTGTCACTTTATTCCTGAGAGTAACTGTAAGGTaGAAAGATGACTTGGTGAGGACTGGTCTTTCCCAT | + |
Preference number: 3 (lower is better) Translates to: FPVTLFLRVTVR*KDDLVRTGLSH Trigger: ATGGGAAAGACCAGTCCTCACCAAGTCATCTTTTCACCTTACAGTTACTCTCAGGAATAAAGTGACAGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | CAAAGATGGTTCACATTAATGGCCTCAGCTACAGTGTaGTTTGCTTCAATTGAACACAGGGCATTTCATCTG | + |
Preference number: 3 (lower is better) Translates to: QRWFTLMASATV*FASIEHRAFHL Trigger: CAGATGAAATGCCCTGTGTTCAATTGAAGCAAAGCACACTGTAGCTGAGGCCATTAATGTGAACCATCTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | GGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCTaGAGCATCTCATCCGATAATTTTAATCTGAGTCAC | + |
Preference number: 3 (lower is better) Translates to: GLCVELSILALL*SISSDNFNLSH Trigger: GTGACTCAGATTAAAATTATCGGATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CCA 72 bp | ATGTGTGCAAACTACTTTCTTACTTGTAGGATGTGCTaGAGCCTACATCATGGTTGCATCAGAGTATCACGT | + |
Preference number: 3 (lower is better) Translates to: MCANYFLTCRMC*SLHHGCIRVSR Trigger: ACGTGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | TGTTGGAATGACATTTGCCAAAGTCTTGGCTGTTGTGATAGAAGATCCTCTAGGAGTGTTGAAAAATTGTaGGCCATTTCCAGAGCAGTC | + |
Preference number: 3 (lower is better) Translates to: CWNDICQSLGCCDRRSSRSVEKL*AISRAV Trigger: GACTGCTCTGGAAATGGCCAACAATTTTTCAACACT...CCTAGAGGATCTTCTATCACAACAGCCAAGACTTTGGCAAATGTCATTCCAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR-3UTR CAA 90 bp | TGGTGTAAGATTCCTGTTGGAATGACATTTGCCAAAGTCTTGGCTGTTGTGATACGAGACAACAGAGACTaGGATGTTTTCTTCAGTTGG | + |
Preference number: 3 (lower is better) Translates to: WCKIPVGMTFAKVLAVVIRDNRD*DVFFSW Trigger: CCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTCG...TATCACAACAGCCAAGACTTTGGCAAATGTCATTCCAACAGGAATCTTACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | AGAAGATCCCAGAGTTTATCGCTTTTAGGAACAGGCTaGATAATTCTCTCCATTTTGCACAAGTACGCACTG | + |
Preference number: 3 (lower is better) Translates to: RRSQSLSLLGTG*IILSILHKYAL Trigger: CAGTGCGTACTTGTGCAAAATGGAGAGAATTATTCAGCCTGTTCCTAAAAGCGATAAACTCTGGGATCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | CTGCAGAATGTGTGGAGACTGCATTGCCGTGACATATaGAAATCCCTTAAACACATTCAGCTCAAAATAGAA | + |
Preference number: 3 (lower is better) Translates to: LQNVWRLHCRDI*KSLKHIQLKIE Trigger: TTCTATTTTGAGCTGAATGTGTTTAAGGGATTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | GAAATGTGTGCAAACTACTTTCTTACTTGTAGGATGTaGTGGAGCCTACATCATGGTTGCATCAGAGTATCA | + |
Preference number: 3 (lower is better) Translates to: EMCANYFLTCRM*WSLHHGCIRVS Trigger: TGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR-3UTR CAA 90 bp | AATGACATTTGCCAAAGTCTTGGCTGTTGTGATAGAAGATCCTCTAGGTCCAATTTGAGTGTTGAAAAATaGTTGGCCATTTCCAGAGCA | + |
Preference number: 3 (lower is better) Translates to: NDICQSLGCCDRRSSRSNLSVEK*LAISRA Trigger: TGCTCTGGAAATGGCCAACAATTTTTCAACACTCAA...ATTGGACCTAGAGGATCTTCTATCACAACAGCCAAGACTTTGGCAAATGTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR TCA 72 bp | ATTAAAATACTAGTCTTTAGATCTCACATATATTCCTaGGGTGTAAATCCTGTGTACCCTGGGCATGGGCCA | + |
Preference number: 3 (lower is better) Translates to: IKILVFRSHIYS*GVNPVYPGHGP Trigger: TGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATATATGTGAGATCTAAAGACTAGTATTTTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR TCA 72 bp | TTACATTGCCTGACCAAGGGAGTATTTATACCAAGGTaGTGTCTTTCCTCCTCAGACCTCAGAATACATTAT | + |
Preference number: 3 (lower is better) Translates to: LHCLTKGVFIPR*CLSSSDLRIHY Trigger: ATAATGTATTCTGAGGTCTGAGGAGGAAAGACATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
3UTR GCA 72 bp | GCTCCTGGAATAATGTTTCTTGGGATATTCAAATTGTaGTGTGTGTTCACGGTCACAGATGCTCTAAATCAA | + |
Preference number: 3 (lower is better) Translates to: APGIMFLGIFKL*CVFTVTDALNQ Trigger: TTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CCA 72 bp | TCAACTCTAGCTTCTCTGTATCCCACAAACATTGCATaGGTCCCAGTAAGAGTTAAAACTGAGATCCTTTTT | + |
Preference number: 3 (lower is better) Translates to: STLASLYPTNIA*VPVRVKTEILF Trigger: AAAAAGGATCTCAGTTTTAACTCTTACTGGGACCCATGCAATGTTTGTGGGATACAGAGAAGCTAGAGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR GCA 72 bp | TGCTCAAAACAGAGATGTCACCGCATTGGCTTTCGGTaGATAAATTCTAAAGACAGTACATTAGTAAAAGAA | + |
Preference number: 3 (lower is better) Translates to: CSKQRCHRIGFR*INSKDSTLVKE Trigger: TTCTTTTACTAATGTACTGTCTTTAGAATTTATGCACCGAAAGCCAATGCGGTGACATCTCTGTTTTGAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CCA 72 bp | TTGTGGGAGAGTAACTTATATTTTACATGTTGGAACTaGAATGAATGCTCATGTGACTTTGCTTTTGACACA | + |
Preference number: 3 (lower is better) Translates to: LWESNLYFTCWN*NECSCDFAFDT Trigger: TGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAACATGTAAAATATAAGTTACTCTCCCACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR GCA 72 bp | AATTCTAAAGACAGTACATTAGTAAAAGAATTTGCTTaGTCTATAGAGATAGGAAACATGATGCCCTGTTGC | + |
Preference number: 3 (lower is better) Translates to: NSKDSTLVKEFA*SIEIGNMMPCC Trigger: GCAACAGGGCATCATGTTTCCTATCTCTATAGAGCAAGCAAATTCTTTTACTAATGTACTGTCTTTAGAATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
CDS-3UTR GCA 90 bp | ATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGGCAGGCACAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: MLEALMNSPARASYAGRHRPLPP*GAKRSS Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...GTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
||
CDS-3UTR CCA 90 bp | GGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGGCAGGCACCCAGGGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC | + |
Preference number: 4 (lower is better) Translates to: GGLDELACQGIVCRQAPREHGQQ*GERSSA Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...CCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 |
||
CDS-3UTR CCA 90 bp | CAGCTGGCAGGTAGATCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC | + |
Preference number: 4 (lower is better) Translates to: QLAGRSLLSCPWQTLGNPEHGQQ*GERSSA Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...AGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGATCTACCTGCCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052590.8 ENSMUST00000130451.2 |
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CDS-3UTR GCA 90 bp | CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: LWGRHQRSAKCFPWPKGVRPLPP*GAKRSS Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR CCA 90 bp | CAGGCACACTCGGGGCACAGACTTCTGGCTCAGGCCTGCATTGCTCCACTGCCCGGCCATCTCAGAGGCTaGAAAGTCCTCACCTTGGTC | + |
Preference number: 4 (lower is better) Translates to: QAHSGHRLLAQACIAPLPGHLRG*KVLTLV Trigger: GACCAAGGTGAGGACTTTCCAGCCTCTGAGATGGCC...GGGCAGTGGAGCAATGCAGGCCTGAGCCAGAAGTCTGTGCCCCGAGTGTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
3UTR CAA 72 bp | GTGCATGCCTGCAGCCCAGTACTGACAGGAGGTTCTTaGGGGCTCACTGGCCAGCCAGCTGAGCCACATGGT | + |
Preference number: 4 (lower is better) Translates to: VHACSPVLTGGS*GLTGQPAEPHG Trigger: ACCATGTGGCTCAGCTGGCTGGCCAGTGAGCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGGCATGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTaGTGCTTGGTCACAGCTCCTCCTTCTCAGCCTCCT | + |
Preference number: 4 (lower is better) Translates to: SPFLPLANPGEP*CLVTAPPSQPP Trigger: AGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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CDS-3UTR GCA 90 bp | CATCTCAGAGGCTGGAAAGTCCTCACCTTGGTCCAGGATCTTCCCCATGATCTTAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: HLRGWKVLTLVQDLPHDLRPLPP*GAKRSS Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...AAGATCATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCAGCCTCTGAGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052590.8 |
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CDS-3UTR CCA 90 bp | ACCAAGAGCTCCTCGCTGGAGGCTGAGTTCTCAGCCAGACGCTTGAACTCATCTGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC | + |
Preference number: 4 (lower is better) Translates to: TKSSSLEAEFSARRLNSSEHGQQ*GERSSA Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...AGATGAGTTCAAGCGTCTGGCTGAGAACTCAGCCTCCAGCGAGGAGCTCTTGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111802.4 |
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CDS-3UTR TCA 90 bp | TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCGTTCTTGGACCTTCCTaGTGGAAGGCCTCCATGACC | + |
Preference number: 4 (lower is better) Translates to: CCKIKEKGWAWWCTPNPSVLGPS*WKASMT Trigger: GGTCATGGAGGCCTTCCATCAGGAAGGTCCAAGAAC...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | GTGGCCTGTTTCCCATGGGACTGGGTGGGCGTTTGCTaGCACTGCCCTGGCTCCTGGAATAATGTTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: VACFPWDWVGVC*HCPGSWNNVSW Trigger: CCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTCCCATGGGAAACAGGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | CTGGCAGTAGTCTTTAGAGTGCTTATGGCCGCTTGTTaGGCTGTGTCCCATGAGGCGCCAGGCTTCAGCAGG | + |
Preference number: 4 (lower is better) Translates to: LAVVFRVLMAAC*AVSHEAPGFSR Trigger: CCTGCTGAAGCCTGGCGCCTCATGGGACACAGCCAAACAAGCGGCCATAAGCACTCTAAAGACTACTGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | AGTCACAGTACACTTGGGAGCGCTCCCTTCACTTGCTaGTCTGGGGCAACTGAGCAGTTTGTGTGCTCAGGA | + |
Preference number: 4 (lower is better) Translates to: SHSTLGSAPFTC*SGATEQFVCSG Trigger: TCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | AATGGCTCACACTTCTGCCAACTATGTCGAGCACACTaGTATCTGCTGAGGAGTTCCAGTCCCCATCTGGCG | + |
Preference number: 4 (lower is better) Translates to: NGSHFCQLCRAH*YLLRSSSPHLA Trigger: CGCCAGATGGGGACTGGAACTCCTCAGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR GCA 90 bp | AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAAAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: KLELPKQCISSQFCTSPKRPLPP*GAKRSS Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR TCA 90 bp | TCTCTAGGTATACATAGTCGCACACATCTCTCCTCCCCGCCCCCAAGTCTAAGCCTCTGGTCACATAGATaGGAAGCACAGTCTTCAGAA | + |
Preference number: 4 (lower is better) Translates to: SLGIHSRTHLSSPPPSLSLWSHR*EAQSSE Trigger: TTCTGAAGACTGTGCTTCTCATCTATGTGACCAGAG...GCTTAGACTTGGGGGCGGGGAGGAGAGATGTGTGCGACTATGTATACCTAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR CCA 90 bp | CATCTGAGACCATGTTTTCTAAAGTCAATCCTTTCGCTCGTTCCAGGAAAAGAAGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC | + |
Preference number: 4 (lower is better) Translates to: HLRPCFLKSILSLVPGKEEHGQQ*GERSSA Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...TTCTTTTCCTGGAACGAGCGAAAGGATTGACTTTAGAAAACATGGTCTCAGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR CCA 90 bp | CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCGGAAAGTCCTCACCTTaGTCCAGGATCTTCCCCATG | + |
Preference number: 4 (lower is better) Translates to: LSHGLLQQHTIAFFIVTVGKSSP*SRIFPM Trigger: CATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCC...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | GGTGTAAATCCTGTGTACCCTGGGCATGGGCCACTCTaGCAAAGATGGTTCACATTAATGGCCTCAGCTACA | + |
Preference number: 4 (lower is better) Translates to: GVNPVYPGHGPL*QRWFTLMASAT Trigger: TGTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | TCATGCCGAGCTCCGACAGCGCTTTCCGTGACTGTTTaGTGTCTGAATCTCCTCTCTCACTTCTGTTCTTGT | + |
Preference number: 4 (lower is better) Translates to: SCRAPTALSVTV*CLNLLSHFCSC Trigger: ACAAGAACAGAAGTGAGAGAGGAGATTCAGACACAAAACAGTCACGGAAAGCGCTGTCGGAGCTCGGCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | ACTGCATCAGGGTGTATTCATGTTGTTCACCTAAGGTaGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGG | + |
Preference number: 4 (lower is better) Translates to: TASGCIHVVHLR*VACSLSLQLKR Trigger: CCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTGAACAACATGAATACACCCTGATGCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | AGGAAGATTCCTTTATACACAAACACGTGCTCACCGTaGGAATCAGAGAGCAGGGACACAGCCCATCCCTCT | + |
Preference number: 4 (lower is better) Translates to: RKIPLYTNTCSP*ESESRDTAHPS Trigger: AGAGGGATGGGCTGTGTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGTTTGTGTATAAAGGAATCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | CTCCCTTCACTTGCTTGTCTGGGGCAACTGAGCAGTTaGTGTGCTCAGGAAACTTGGTTCTTGATGTCTTCC | + |
Preference number: 4 (lower is better) Translates to: LPSLACLGQLSS*CAQETWFLMSS Trigger: GGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR TCA 90 bp | GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTCTTGTCGCCATAGTCTaGGATCCCCACCTCTGCCAC | + |
Preference number: 4 (lower is better) Translates to: VDCHGPVAISKMKRLLCSLVAIV*DPHLCH Trigger: GTGGCAGAGGTGGGGATCTCAGACTATGGCGACAAG...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR CCA 90 bp | TTTGCTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCCCCCAGTTCAGTTCTTaGACCTTCCTGATGGAAGGC | + |
Preference number: 4 (lower is better) Translates to: FACVVPGLCVELSILALLPQFSS*TFLMEG Trigger: GCCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGG...GAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TCGGAGTCCATTATGACAGTCCTATTGGTGTCTTGTTaGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATC | + |
Preference number: 4 (lower is better) Translates to: SESIMTVLLVSC*VSSVLLHSSSI Trigger: GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGACTGTCATAATGGACTCCGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
||
CDS-3UTR TCA 90 bp | TTTCATCTGCTTTGTTTCCAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGTCTCAGCCAGACGCTTaGACTCATCTTGCTTCTCTC | + |
Preference number: 4 (lower is better) Translates to: FHLLCFQVTLNGSLGKVESQPDA*THLASL Trigger: GAGAGAAGCAAGATGAGTTCAAGCGTCTGGCTGAGA...CTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGGAAACAAAGCAGATGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR TCA 90 bp | CATCTGAGACCATGTTTTCTAAAGTCAATCCTTTCGCTCGTTCCAGGAAAAGAAGGGAAGGGCTCGCCATaGACCCCAGTTCAGTTCTTG | + |
Preference number: 4 (lower is better) Translates to: HLRPCFLKSILSLVPGKEGKGSP*TPVQFL Trigger: CAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCC...TTCTTTTCCTGGAACGAGCGAAAGGATTGACTTTAGAAAACATGGTCTCAGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR GCA 90 bp | TCTCCACATGATGGAGAGTGCACAAACCTAGGTGTGCTGCCATCAATTTTGTATGGCTCCAACCTTAACTaGCCCATTGTACAGCACAGG | + |
Preference number: 4 (lower is better) Translates to: SPHDGECTNLGVLPSILYGSNLN*PIVQHR Trigger: CCTGTGCTGTACAATGGGGCAGTTAAGGTTGGAGCC...ATACAAAATTGATGGCAGCACACCTAGGTTTGTGCACTCTCCATCATGTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
||
CDS-3UTR TCA 90 bp | ACTCCTATAGATCCAGCTTTAATTAATTACACATTATTTGGGGTTGTGCACAGCCTCCTCGCTGGAGGCTaGGTTCTCAGCCAGACGCTT | + |
Preference number: 4 (lower is better) Translates to: TPIDPALINYTLFGVVHSLLAGG*VLSQTL Trigger: AAGCGTCTGGCTGAGAACTCAGCCTCCAGCGAGGAG...GCTGTGCACAACCCCAAATAATGTGTAATTAATTAAAGCTGGATCTATAGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | CTGGTTTTCACTCGCTATGTAGTGAGATGCCATGACTaGTCTTGGTTCCATTTGCCCTCATCTGAGACCATG | + |
Preference number: 4 (lower is better) Translates to: LVFTRYVVRCHD*SWFHLPSSETM Trigger: CATGGTCTCAGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCTCACTACATAGCGAGTGAAAACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TTCTTCCCTGAGATTTGCTTGTGTTGTGCCAGGACTTaGTGTAGAACTCTCTATCTTGGCTCTGCTCTGCAG | + |
Preference number: 4 (lower is better) Translates to: FFPEICLCCART*CRTLYLGSALQ Trigger: CTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | CAGAACCACCCAAGTCTTGTTTGCATCCTGGCTAGCTaGAAGTGTTTTCAAGCTGTAAGCTCCCATTGCAAG | + |
Preference number: 4 (lower is better) Translates to: QNHPSLVCILAS*KCFQAVSSHCK Trigger: CTTGCAATGGGAGCTTACAGCTTGAAAACACTTCAAGCTAGCCAGGATGCAAACAAGACTTGGGTGGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | GGCAGATGCACAAAAACTGCAGCCACTCCTGGTGTGTaGAGACTGTATTTTTCTCCTGGTTGTCCCTTGTTT | + |
Preference number: 4 (lower is better) Translates to: GRCTKTAATPGV*RLYFSPGCPLF Trigger: AAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | GTTGGAACTGGAATGAATGCTCATGTGACTTTGCTTTaGACACAGTCTTATGTAGCACAGGCTGGTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: VGTGMNAHVTLL*TQSYVAQAGPQ Trigger: CTGAGGACCAGCCTGTGCTACATAAGACTGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | CAACTGAGCAGTTTGTGTGCTCAGGAAACTTGGTTCTaGATGTCTTCCTCGGAGTCCATTATGACAGTCCTA | + |
Preference number: 4 (lower is better) Translates to: QLSSLCAQETWF*MSSSESIMTVL Trigger: TAGGACTGTCATAATGGACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTGCTaGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTAT | + |
Preference number: 4 (lower is better) Translates to: WAHSEMFFPEIC*CCARTLCRTLY Trigger: ATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | AGACAAGCTTCACCAAGATGCAGGTCCTTAGGCTCTTaGAGTGTTGAAAAATTGTTGGCCATTTCCAGAGCA | + |
Preference number: 4 (lower is better) Translates to: RQASPRCRSLGS*SVEKLLAISRA Trigger: TGCTCTGGAAATGGCCAACAATTTTTCAACACTCAAAGAGCCTAAGGACCTGCATCTTGGTGAAGCTTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TTTGCGAGACAACAGAGACTTGGATGTTTTCTTCAGTaGGGATCCAAAAGACAGGTAAGAGGAACTCAGCAG | + |
Preference number: 4 (lower is better) Translates to: FARQQRLGCFLQ*GSKRQVRGTQQ Trigger: CTGCTGAGTTCCTCTTACCTGTCTTTTGGATCCCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTCGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TTTGAATGGTTAGCTTGCTGGCGAGTGTTGCTTACATaGCCTGACCAAGGGAGTATTTATACCAAGGTGATG | + |
Preference number: 4 (lower is better) Translates to: FEWLACWRVLLT*PDQGSIYTKVM Trigger: CATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAAGCAACACTCGCCAGCAAGCTAACCATTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTaGGCTCTGCTCTGCAGCATCTCATCCGATAATTTT | + |
Preference number: 4 (lower is better) Translates to: CVVPGLCVELSI*ALLCSISSDNF Trigger: AAAATTATCGGATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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3UTR CAA 72 bp | TTACATGTTGGAACTGGAATGAATGCTCATGTGACTTaGCTTTTGACACAGTCTTATGTAGCACAGGCTGGT | + |
Preference number: 4 (lower is better) Translates to: LHVGTGMNAHVT*LLTQSYVAQAG Trigger: ACCAGCCTGTGCTACATAAGACTGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAACATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | CTGGCTCCTGGAATAATGTTTCTTGGGATATTCAAATaGTGCTGTGTGTTCACGGTCACAGATGCTCTAAAT | + |
Preference number: 4 (lower is better) Translates to: LAPGIMFLGIFK*CCVFTVTDALN Trigger: ATTTAGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | GGTATGTTTTATAATGGGCCTGATGTTGGTGTCCTGTaGACACTTAAGAACTGCATCAGGGTGTATTCATGT | + |
Preference number: 4 (lower is better) Translates to: GMFYNGPDVGVL*TLKNCIRVYSC Trigger: ACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCCATTATAAAACATACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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3UTR CAA 72 bp | CAGAATACATTATTCAAGCTTACAAATATGGTGCATTaGAGAAGATCCCAGAGTTTATCGCTTTTAGGAACA | + |
Preference number: 4 (lower is better) Translates to: QNTLFKLTNMVH*RRSQSLSLLGT Trigger: TGTTCCTAAAAGCGATAAACTCTGGGATCTTCTCAAATGCACCATATTTGTAAGCTTGAATAATGTATTCTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS TCA 90 bp | AAGGGTCAGAAGGGACCAACAGCTCAGTGGGGGAAGGGCTCGCCATaGACCCCAGTTCAGTTCTTGGACCTTCCTGATGGAAGGCCTCCA | + |
Preference number: 5 (lower is better) Translates to: KGQKGPTAQWGKGSP*TPVQFLDLPDGRPP Trigger: TGGAGGCCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCCCCACTGAGCTGTTGGTCCCTTCTGACCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS CCA 90 bp | CAGCTCAGTGGGGGAAGGGCTCGCCATGAACCCCAGTTCAGTTCTTaGACCTTCCTGATGGAAGGCCTCCATGACCTTGTAGAAAGTGAC | + |
Preference number: 5 (lower is better) Translates to: QLSGGRARHEPQFSS*TFLMEGLHDLVESD Trigger: GTCACTTTCTACAAGGTCATGGAGGCCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCCCCACTGAGCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR CAA 90 bp | CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGACCCCAGTTCAGTTCTaGGACCTTCCTGATGGAAGG | + |
Preference number: 5 (lower is better) Translates to: LWGRHQRSAKCFPWPKGVTPVQF*DLPDGR Trigger: CCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGGT...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |
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CDS-3UTR CAA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACTTGCTGTCACTCATCTaGTTCTCTATCAGCTTACCG | + |
Preference number: 5 (lower is better) Translates to: LCCVFTVTDALNQALSADLLSLI*FSISLP Trigger: CGGTAAGCTGATAGAGAACAAGATGAGTGACAGCAA...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR CAA 90 bp | TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACTGTAGCTCTTCTTTCTaGCTGTCACTCATCTTGTTC | + |
Preference number: 5 (lower is better) Translates to: LCCVFTVTDALNQALSADCSSSF*LSLILF Trigger: GAACAAGATGAGTGACAGCAAGAAAGAAGAGCTACA...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR CAA 90 bp | GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTTTCTCAGCCAGACGCTaGAACTCATCTTGCTTCTCT | + |
Preference number: 5 (lower is better) Translates to: VDCHGPVAISKMKRLLCSFSARR*NSSCFS Trigger: AGAGAAGCAAGATGAGTTCAAGCGTCTGGCTGAGAA...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS-3UTR CAA 90 bp | AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAATGGAAAGTCCTCACCTaGGTCCAGGATCTTCCCCAT | + |
Preference number: 5 (lower is better) Translates to: KLELPKQCISSQFCTSPKWKVLT*VQDLPH Trigger: ATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCA...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000130451.2 |
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CDS GCA 72 bp | TGTCCAAGGGAAGGGCACCCTTCGTGTGTAGGCCGCTaGCGCCGTGCGGAGCAAAGAGGAGCAGCAGGCCCA | + |
Preference number: 6 (lower is better) Translates to: CPREGHPSCVGR*RRAEQRGAAGP Trigger: TGGGCCTGCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCTACACACGAAGGGTGCCCTTCCCTTGGACA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000052590.8 ENSMUST00000111802.4 ENSMUST00000130451.2 ENSMUST00000153758.2 |
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CDS TCA 72 bp | AAGGGACCAACAGCTCAGTGGGGGAAGGGCTCGCCATaGACCCCAGTTCAGTTCTTGGACCTTCCTGATGGA | + |
Preference number: 6 (lower is better) Translates to: KGPTAQWGKGSP*TPVQFLDLPDG Trigger: TCCATCAGGAAGGTCCAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCCCCACTGAGCTGTTGGTCCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000153758.2 |