RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERP29 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000029616

Ensembl transcript IDs: ENSMUST00000052590.8, ENSMUST00000111802.4, ENSMUST00000130451.2, ENSMUST00000153758.2

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATaGAGGCAGGCACCCAGGCATGCCCAGGTAGACCCCCTGCCCCTT +
Preference number: 1 (lower is better)
Translates to: LYAGGLDELACQGIV*RQAPRHAQVDPLPL
Trigger: AAGGGGCAGGGGGTCTACCTGGGCATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
3UTR GCA 90 bp GATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTaGCAGGGCATCGTATGCAGGCAGGCACCCAGGCATGCCCAGGTA +
Preference number: 1 (lower is better)
Translates to: DGLSGLYAGGLDELA*QGIVCRQAPRHAQV
Trigger: TACCTGGGCATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
3UTR GCA 90 bp CACACTCGGGGCACAGACTTCTGGCTCAGGCCTGCATTGCTCCACTaGCCCTTCCACCCACAGGGGTCCCACAGCTGGCAGGTAGATCTC +
Preference number: 1 (lower is better)
Translates to: HTRGTDFWLRPALLH*PFHPQGSHSWQVDL
Trigger: GAGATCTACCTGCCAGCTGTGGGACCCCTGTGGGTGGAAGGGGCAGTGGAGCAATGCAGGCCTGAGCCAGAAGTCTGTGCCCCGAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000130451.2
3UTR GCA 90 bp TGTCCCATGAGGCGCCAGGCTTCAGCAGGGATGTTCTCAGCCTTCTaGTACTGCTCCCTGGGCCCTTGGCTAGCCCTGCAGAGCCACTGT +
Preference number: 1 (lower is better)
Translates to: CPMRRQASAGMFSAF*YCSLGPWLALQSHC
Trigger: ACAGTGGCTCTGCAGGGCTAGCCAAGGGCCCAGGGAGCAGTAGCAGAAGGCTGAGAACATCCCTGCTGAAGCCTGGCGCCTCATGGGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp TCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTTGTGCTTaGTCACAGCTCCTCCTTCTCAGCCTCCTTCTTCCGGAAGGCCGT +
Preference number: 1 (lower is better)
Translates to: SLLSCPWQTLGNPCA*SQLLLLSLLLPEGR
Trigger: ACGGCCTTCCGGAAGAAGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR TCA 90 bp CTGTGTGCTGGACTGCCAAGCTGGGTCTGTCCTTGGCGTGCTGTATaGGCTCCGAGTGGAGGGAGACAAGCTTCACCAAGATGCAGGTCC +
Preference number: 1 (lower is better)
Translates to: LCAGLPSWVCPWRAV*APSGGRQASPRCRS
Trigger: GGACCTGCATCTTGGTGAAGCTTGTCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGGACAGACCCAGCTTGGCAGTCCAGCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp CCATGTGTAAATCAGGCATGGCAGTGCATGCCTGCAGCCCAGTACTaGCAGGAGGTTCTTTGGGGCTCACTGGCCAGCCAGCTGAGCCAC +
Preference number: 1 (lower is better)
Translates to: PCVNQAWQCMPAAQY*QEVLWGSLASQLSH
Trigger: GTGGCTCAGCTGGCTGGCCAGTGAGCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGGCATGCACTGCCATGCCTGATTTACACATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp CAGAGCCTTGACCCTGTCGTAGAGAATGCTGGAGGGCTCTGGCTGTaGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTGCCCTGGGGAC +
Preference number: 1 (lower is better)
Translates to: QSLDPVVENAGGLWL*LWLRSSRKEVCPGD
Trigger: GTCCCCAGGGCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACAGGGTCAAGGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp TCAGCAGGGATGTTCTCAGCCTTCTGCTACTGCTCCCTGGGCCCTTaGCTAGCCCTGCAGAGCCACTGTAATGTGGCATTTGAAGAGGAC +
Preference number: 1 (lower is better)
Translates to: SAGMFSAFCYCSLGP*LALQSHCNVAFEED
Trigger: GTCCTCTTCAAATGCCACATTACAGTGGCTCTGCAGGGCTAGCCAAGGGCCCAGGGAGCAGTAGCAGAAGGCTGAGAACATCCCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp CTCTGTCAGCTGACCATGGTCCGTATGGACTGCATGGGCTGGCTATaGCCCTCAGGCATAGCTCCTTCCTCTAATGGTCTATCCTGTCAG +
Preference number: 1 (lower is better)
Translates to: LCQLTMVRMDCMGWL*PSGIAPSSNGLSCQ
Trigger: CTGACAGGATAGACCATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAGCTGACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp GAGATACAGAGCCTTGACCCTGTCGTAGAGAATGCTGGAGGGCTCTaGCTGTGGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTGCCCT +
Preference number: 1 (lower is better)
Translates to: EIQSLDPVVENAGGL*LWLWLRSSRKEVCP
Trigger: AGGGCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACAGGGTCAAGGCTCTGTATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp CGCACTGAGCGGATGCTGTTAGACCTTCTACTTGAAGCAAACATGTaGGTACCTGATGGGAGGCAAGGATGGACTGAGGGGCCAGACCTG +
Preference number: 1 (lower is better)
Translates to: RTERMLLDLLLEANM*VPDGRQGWTEGPDL
Trigger: CAGGTCTGGCCCCTCAGTCCATCCTTGCCTCCCATCAGGTACTCACATGTTTGCTTCAAGTAGAAGGTCTAACAGCATCCGCTCAGTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp ATCAAGCTCTGTCAGCTGACCATGGTCCGTATGGACTGCATGGGCTaGCTATGGCCCTCAGGCATAGCTCCTTCCTCTAATGGTCTATCC +
Preference number: 1 (lower is better)
Translates to: IKLCQLTMVRMDCMG*LWPSGIAPSSNGLS
Trigger: GGATAGACCATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAGCTGACAGAGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp CAGTGTCTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTaGCCCAAAGGGGTGATCTATCTTCTGATCCTAGTGGCCTGGGCC +
Preference number: 1 (lower is better)
Translates to: QCLWGRHQRSAKCFP*PKGVIYLLILVAWA
Trigger: GGCCCAGGCCACTAGGATCAGAAGATAGATCACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp CATTATGAGAGCCAGATGACTGCCCTGTCCCAGTGCTGCTGGACATaGTCATCTGCCTGCAGAATGTGTGGAGACTGCATTGCCGTGACA +
Preference number: 1 (lower is better)
Translates to: HYESQMTALSQCCWT*SSACRMCGDCIAVT
Trigger: TGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCATGTCCAGCAGCACTGGGACAGGGCAGTCATCTGGCTCTCATAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp GAGCCAGATGACTGCCCTGTCCCAGTGCTGCTGGACATGATCATCTaGCTGCAGAATGTGTGGAGACTGCATTGCCGTGACATATGCAAA +
Preference number: 1 (lower is better)
Translates to: EPDDCPVPVLLDMII*LQNVWRLHCRDICK
Trigger: TTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCATGTCCAGCAGCACTGGGACAGGGCAGTCATCTGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp TGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCACCTTGTGTCTaGTACCCACCTAGGAGCAGTGTCTCTCTGAAGGAGAGTGGTTTC +
Preference number: 1 (lower is better)
Translates to: WCLLSCCTAHPSPCV*YPPRSSVSLKESGF
Trigger: GAAACCACTCTCCTTCAGAGAGACACTGCTCCTAGGTGGGTACCAGACACAAGGTGATGGATGAGCTGTGCAGCAGGACAGAAGACACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp AATGCAGTTGACTTAGCACCCGTGGCGCAGCCCCACGGCTTGAAATaGACCCTGCGAGGCTGTGTATCAGAGGGTATGTTGTTGACTATT +
Preference number: 1 (lower is better)
Translates to: NAVDLAPVAQPHGLK*TLRGCVSEGMLLTI
Trigger: AATAGTCAACAACATACCCTCTGATACACAGCCTCGCAGGGTTCATTTCAAGCCGTGGGGCTGCGCCACGGGTGCTAAGTCAACTGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 90 bp CAGAAATCCACCTGCCTCTGCCTCTCAAGTGCTGGGATTAAGGCATaGGCCACCAATGCCTGGCTGTTTAATCCTAAGAAGGACTCTAGG +
Preference number: 1 (lower is better)
Translates to: QKSTCLCLSSAGIKA*ATNAWLFNPKKDSR
Trigger: CCTAGAGTCCTTCTTAGGATTAAACAGCCAGGCATTGGTGGCGCATGCCTTAATCCCAGCACTTGAGAGGCAGAGGCAGGTGGATTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp AGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTaGGAGAAGATGAAAACTGCTCTTGATTATGTCATGCCGAGCTCC +
Preference number: 1 (lower is better)
Translates to: RLVACSLSLQLKRLV*EKMKTALDYVMPSS
Trigger: GGAGCTCGGCATGACATAATCAAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp CATCTTGTTCTCTATCAGCTTACCGATCCGGGCCATCTCAGAGGCTaGAAAGTCCTCACCTTGGTCCAGGATCTTCCCCATGATCTTCAG +
Preference number: 1 (lower is better)
Translates to: HLVLYQLTDPGHLRG*KVLTLVQDLPHDLQ
Trigger: CTGAAGATCATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCAGCCTCTGAGATGGCCCGGATCGGTAAGCTGATAGAGAACAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR TCA 90 bp ATGGCTCACACTTCTGCCAACTATGTCGAGCACACTTGTATCTGCTaGGGAGTTCCAGTCCCCATCTGGCGGATCAAAAGCTGGGAGTTT +
Preference number: 1 (lower is better)
Translates to: MAHTSANYVEHTCIC*GVPVPIWRIKSWEF
Trigger: AAACTCCCAGCTTTTGATCCGCCAGATGGGGACTGGAACTCCTCAGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR TCA 90 bp AATGCCTGGCTGTTTAATCCTAAGAAGGACTCTAGGCAGCCATTATaGGAGCCAGATGACTGCCCTGTCCCAGTGCTGCTGGACATGATC +
Preference number: 1 (lower is better)
Translates to: NAWLFNPKKDSRQPL*EPDDCPVPVLLDMI
Trigger: GATCATGTCCAGCAGCACTGGGACAGGGCAGTCATCTGGCTCTCATAATGGCTGCCTAGAGTCCTTCTTAGGATTAAACAGCCAGGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp AGCGCTCCCTTCACTTGCTTGTCTGGGGCAACTGAGCAGTTTGTGTaGTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGAGTCCATTAT +
Preference number: 1 (lower is better)
Translates to: SAPFTCLSGATEQFV*SGNLVLDVFLGVHY
Trigger: ATAATGGACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp CAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTGAATaGCTCACACTTCTGCCAACTATGTCGAGCACACTTGTATCTGCT +
Preference number: 1 (lower is better)
Translates to: QVTLNGSLGKVEELE*LTLLPTMSSTLVSA
Trigger: AGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp TTCCCTTGGCCCAAAGGGGTGATCTATCTTCTGATCCTAGTGGCCTaGGCCCACTCTGAAATGTTCTTCCCTGAGATTTGCTTGTGTTGT +
Preference number: 1 (lower is better)
Translates to: FPWPKGVIYLLILVA*AHSEMFFPEICLCC
Trigger: ACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGCCACTAGGATCAGAAGATAGATCACCCCTTTGGGCCAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp TTTCCAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTaGATGGCTCACACTTCTGCCAACTATGTCGAGCACACTTGTATC +
Preference number: 1 (lower is better)
Translates to: FPGHFEWQSGESGGA*MAHTSANYVEHTCI
Trigger: GATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp ATCCTAGTGGCCTGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTaGTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGC +
Preference number: 1 (lower is better)
Translates to: ILVAWAHSEMFFPEI*LCCARTLCRTLYLG
Trigger: GCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGCCACTAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp CCTGTCCCAGTGCTGCTGGACATGATCATCTGCCTGCAGAATGTGTaGAGACTGCATTGCCGTGACATATGCAAATCCCTTAAACACATT +
Preference number: 1 (lower is better)
Translates to: PVPVLLDMIICLQNV*RLHCRDICKSLKHI
Trigger: AATGTGTTTAAGGGATTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCATGTCCAGCAGCACTGGGACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp GTGGGCGTTTGCTTGCACTGCCCTGGCTCCTGGAATAATGTTTCTTaGGATATTCAAATTGTGCTGTGTGTTCACGGTCACAGATGCTCT +
Preference number: 1 (lower is better)
Translates to: VGVCLHCPGSWNNVS*DIQIVLCVHGHRCS
Trigger: AGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp AATTTTAATCTGAGTCACAGTACACTTGGGAGCGCTCCCTTCACTTaGTTGTCTGGGGCAACTGAGCAGTTTGTGTGCTCAGGAAACTTG +
Preference number: 1 (lower is better)
Translates to: NFNLSHSTLGSAPFT*LSGATEQFVCSGNL
Trigger: CAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAGATTAAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp GAGACAAGCTTCACCAAGATGCAGGTCCTTAGGCTCTTTGAGTGTTaGAAAATTGTTGGCCATTTCCAGAGCAGTCGTCTAAGAACTGGG +
Preference number: 1 (lower is better)
Translates to: ETSFTKMQVLRLFEC*KIVGHFQSSRLRTG
Trigger: CCCAGTTCTTAGACGACTGCTCTGGAAATGGCCAACAATTTTTCAACACTCAAAGAGCCTAAGGACCTGCATCTTGGTGAAGCTTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp ATCTCACATATATTCCTGAGGTGTAAATCCTGTGTACCCTGGGCATaGGCCACTCTTGCAAAGATGGTTCACATTAATGGCCTCAGCTAC +
Preference number: 1 (lower is better)
Translates to: ISHIFLRCKSCVPWA*ATLAKMVHINGLSY
Trigger: GTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATATATGTGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp GAAGAGGACTATCTCAGGCAGATGCACAAAAACTGCAGCCACTCCTaGTGTGTTGAGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCT +
Preference number: 1 (lower is better)
Translates to: EEDYLRQMHKNCSHS*CVETVFFSWLSLVS
Trigger: AGAAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 90 bp CAAGCCATCCTGTCAGGACTCAGGGGTAGACTGCCACGGTCCTGTTaGTATCTCAAAAATGAAGAGACTACTTTGTTCTTTAGATTTAGC +
Preference number: 1 (lower is better)
Translates to: QAILSGLRGRLPRSC*YLKNEETTLFFRFS
Trigger: GCTAAATCTAAAGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTACCCCTGAGTCCTGACAGGATGGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp AATGTGGCATTTGAAGAGGACTATCTCAGGCAGATGCACAAAAACTaGAGCCACTCCTGGTGTGTTGAGACTGTATTTTTCTCCTGGTTG +
Preference number: 1 (lower is better)
Translates to: NVAFEEDYLRQMHKN*SHSWCVETVFFSWL
Trigger: CAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTCAAATGCCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 90 bp TGTGTATCAGAGGGTATGTTGTTGACTATTGGCCTATTTTTCTCCTaGGCAAATTACTCAGGCATAGTGGAAATGGGGGCAGAGCAAGCA +
Preference number: 1 (lower is better)
Translates to: CVSEGMLLTIGLFFS*ANYSGIVEMGAEQA
Trigger: TGCTTGCTCTGCCCCCATTTCCACTATGCCTGAGTAATTTGCCCAGGAGAAAAATAGGCCAATAGTCAACAACATACCCTCTGATACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp TTACTTCTTTGCTGTGGACGGATAGTCCTCTGTAGTATCTCCACATaGTGGAGAGTGCACAAACCTAGGTGTGCTGCCATCAATTTTGTA +
Preference number: 1 (lower is better)
Translates to: LLLCCGRIVLCSIST*WRVHKPRCAAINFV
Trigger: TACAAAATTGATGGCAGCACACCTAGGTTTGTGCACTCTCCATCATGTGGAGATACTACAGAGGACTATCCGTCCACAGCAAAGAAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR TCA 90 bp GTGCATTTGAGAAGATCCCAGAGTTTATCGCTTTTAGGAACAGGCTaGATAATTCTCTCCATTTTGCACAAGTACGCACTGAGCGGATGC +
Preference number: 1 (lower is better)
Translates to: VHLRRSQSLSLLGTG*IILSILHKYALSGC
Trigger: GCATCCGCTCAGTGCGTACTTGTGCAAAATGGAGAGAATTATTCAGCCTGTTCCTAAAAGCGATAAACTCTGGGATCTTCTCAAATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 90 bp ACTGCCCTGGCTCCTGGAATAATGTTTCTTGGGATATTCAAATTGTaGTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCA +
Preference number: 1 (lower is better)
Translates to: TALAPGIMFLGIFKL*CVFTVTDALNQALS
Trigger: TGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp TGTAAGGAAATGTGTGCAAACTACTTTCTTACTTGTAGGATGTGCTaGAGCCTACATCATGGTTGCATCAGAGTATCACGTGCTCCATCC +
Preference number: 1 (lower is better)
Translates to: CKEMCANYFLTCRMC*SLHHGCIRVSRAPS
Trigger: GGATGGAGCACGTGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACATTTCCTTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp AGCAGTGTCTCTCTGAAGGAGAGTGGTTTCATTTTGGGTGGGCTATaGTCGTGTGAGTATGGCATCCTTAGAATCTTTGAATATAGCACA +
Preference number: 1 (lower is better)
Translates to: SSVSLKESGFILGGL*SCEYGILRIFEYST
Trigger: TGTGCTATATTCAAAGATTCTAAGGATGCCATACTCACACGACCATAGCCCACCCAAAATGAAACCACTCTCCTTCAGAGAGACACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 90 bp CCACTCTTGCAAAGATGGTTCACATTAATGGCCTCAGCTACAGTGTaGTTTGCTTCAATTGAACACAGGGCATTTCATCTGCTTTGTTTC +
Preference number: 1 (lower is better)
Translates to: PLLQRWFTLMASATV*FASIEHRAFHLLCF
Trigger: GAAACAAAGCAGATGAAATGCCCTGTGTTCAATTGAAGCAAAGCACACTGTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp ACTTGTAAGGAAATGTGTGCAAACTACTTTCTTACTTGTAGGATGTaGTGGAGCCTACATCATGGTTGCATCAGAGTATCACGTGCTCCA +
Preference number: 1 (lower is better)
Translates to: TCKEMCANYFLTCRM*WSLHHGCIRVSRAP
Trigger: TGGAGCACGTGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACATTTCCTTACAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 90 bp AGGAAGATGATGTTCCATGGGAAGATTTGCGAGACAACAGAGACTTaGATGTTTTCTTCAGTTGGGATCCAAAAGACAGGTAAGAGGAAC +
Preference number: 1 (lower is better)
Translates to: RKMMFHGKICETTET*MFSSVGIQKTGKRN
Trigger: GTTCCTCTTACCTGTCTTTTGGATCCCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTCGCAAATCTTCCCATGGAACATCATCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp GAGTGTTGCTTACATTGCCTGACCAAGGGAGTATTTATACCAAGGTaGTGTCTTTCCTCCTCAGACCTCAGAATACATTATTCAAGCTTA +
Preference number: 1 (lower is better)
Translates to: ECCLHCLTKGVFIPR*CLSSSDLRIHYSSL
Trigger: TAAGCTTGAATAATGTATTCTGAGGTCTGAGGAGGAAAGACATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAAGCAACACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 90 bp TTGAAAAAGGTATGTTTTATAATGGGCCTGATGTTGGTGTCCTGTTaGCACTTAAGAACTGCATCAGGGTGTATTCATGTTGTTCACCTA +
Preference number: 1 (lower is better)
Translates to: LKKVCFIMGLMLVSC*HLRTASGCIHVVHL
Trigger: TAGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCCATTATAAAACATACCTTTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 90 bp TTGTGGGAGAGTAACTTATATTTTACATGTTGGAACTGGAATGAATaGTCATGTGACTTTGCTTTTGACACAGTCTTATGTAGCACAGGC +
Preference number: 1 (lower is better)
Translates to: LWESNLYFTCWNWNE*SCDFAFDTVLCSTG
Trigger: GCCTGTGCTACATAAGACTGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAACATGTAAAATATAAGTTACTCTCCCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp GGCATGGCAGTGCATGCCTGCAGCCCAGTACTGACAGGAGGTTCTTaGGGGCTCACTGGCCAGCCAGCTGAGCCACATGGTGAGGTCCAG +
Preference number: 2 (lower is better)
Translates to: GMAVHACSPVLTGGS*GLTGQPAEPHGEVQ
Trigger: CTGGACCTCACCATGTGGCTCAGCTGGCTGGCCAGTGAGCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGGCATGCACTGCCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp ATCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTTGTGCTaGGTCACAGCTCCTCCTTCTCAGCCTCCTTCTTCCGGAAGGCCG +
Preference number: 2 (lower is better)
Translates to: ISPFLPLANPGEPLC*VTAPPSQPPSSGRP
Trigger: CGGCCTTCCGGAAGAAGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR-3UTR TCA 90 bp GGCCTCTTGATGAGGCATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACCCTTGGCGTGCTGTATaGGCTCCGAGTGGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: GLLMRHASVLSQAGSQSYPWRAV*APSGGR
Trigger: TCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGG...GTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp CCTGCCCCTGGCAAACCCTGGGGAACCCTTGTGCTTGGTCACAGCTCCTCCTTCGGAAAGTCCTCACCTTaGTCCAGGATCTTCCCCATG +
Preference number: 2 (lower is better)
Translates to: PAPGKPWGTLVLGHSSSFGKSSP*SRIFPM
Trigger: CATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCC...GAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR-3UTR CCA 90 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCGATGGGAGGCAAGGATaGACTGAGGGGCCAGACCTG +
Preference number: 2 (lower is better)
Translates to: CCKIKEKGWAWWCTPNPSDGRQG*TEGPDL
Trigger: CAGGTCTGGCCCCTCAGTCCATCCTTGCCTCCCATC...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp ATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGGCAGGCACGGCTCCAACCTTAACTaGCCCATTGTACAGCACAGG +
Preference number: 2 (lower is better)
Translates to: MLEALMNSPARASYAGRHGSNLN*PIVQHR
Trigger: CCTGTGCTGTACAATGGGGCAGTTAAGGTTGGAGCC...GTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
3UTR-3UTR CCA 90 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCCATCCCTCTGTGTGCTaGACTGCCAAGCTGGGTCTG +
Preference number: 2 (lower is better)
Translates to: CCKIKEKGWAWWCTPNPSHPSVC*TAKLGL
Trigger: CAGACCCAGCTTGGCAGTCCAGCACACAGAGGGATG...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCAATGTTCCCCATGCCTaGGACCACTCTGTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: CCKIKEKGWAWWCTPNPSNVPHA*DHSVWP
Trigger: GGGCCACACAGAGTGGTCCCAGGCATGGGGAACATT...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCACTGCCTGGGGACATaGAAGACAGAAGCCATGGGA +
Preference number: 2 (lower is better)
Translates to: FQDGLSGLYAGGLDELACHCLGT*KTEAMG
Trigger: TCCCATGGCTTCTGTCTTTCATGTCCCCAGGCAGTG...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR-3UTR TCA 90 bp CTCACTGGCCAGCCAGCTGAGCCACATGGTGAGGTCCAGGTTCAGGGAGAAACCAACTTTTCGGCATGTTaGTGCCCACCAGTGATCCCA +
Preference number: 2 (lower is better)
Translates to: LTGQPAEPHGEVQVQGETNFSAC*CPPVIP
Trigger: TGGGATCACTGGTGGGCATCAACATGCCGAAAAGTT...GGTTTCTCCCTGAACCTGGACCTCACCATGTGGCTCAGCTGGCTGGCCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp CGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACAGCTGGCCGAGGTGTCCGAGGCAAGGATGGACTaGGGGGCCAGACCTGATGTT +
Preference number: 2 (lower is better)
Translates to: RPSLISPDTAGKQLAEVSEARMD*GARPDV
Trigger: AACATCAGGTCTGGCCCCTCAGTCCATCCTTGCCTC...GGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp CGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGAAAGACAGAAGCCATaGGAACAGGTCTCTGACACC +
Preference number: 2 (lower is better)
Translates to: RASMLEALMNSPARASYAERQKP*EQVSDT
Trigger: GGTGTCAGAGACCTGTTCCCATGGCTTCTGTCTTTC...TGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR-3UTR GCA 90 bp TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCGGCTCCAACCTTAACTaGCCCATTGTACAGCACAGG +
Preference number: 2 (lower is better)
Translates to: FQDGLSGLYAGGLDELACGSNLN*PIVQHR
Trigger: CCTGTGCTGTACAATGGGGCAGTTAAGGTTGGAGCC...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
3UTR-3UTR GCA 90 bp CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCAAGGCCCAGTGCTGCTaGTGCTGTGGTTTATATGGG +
Preference number: 2 (lower is better)
Translates to: HLRLVACSLSLQLKRLVCKAQCC*CCGLYG
Trigger: CCCATATAAACCACAGCAGCAGCAGCACTGGGCCTT...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR GCA 90 bp GGCCTCTTGATGAGGCATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACAAGGAATGTTCCCCATaGCTGGGACCACTCTGTGTG +
Preference number: 2 (lower is better)
Translates to: GLLMRHASVLSQAGSQSYKECSP*LGPLCV
Trigger: CACACAGAGTGGTCCCAGGCATGGGGAACATTCCTT...GTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCATACATGGGCGGCCATaGAAACGTAAGGCTGTGCCT +
Preference number: 2 (lower is better)
Translates to: HLRLVACSLSLQLKRLVCIHGRP*KRKAVP
Trigger: AGGCACAGCCTTACGTTTCCATGGCCGCCCATGTAT...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp GAGGACAGGAAGACAGGGGAGATACAGAGCCTTGACCCTGTCGTAGAGAATGCTGGAGGGCTCTGGCTGTaGCTCTGGCTCAGATCTAGT +
Preference number: 2 (lower is better)
Translates to: EDRKTGEIQSLDPVVENAGGLWL*LWLRSS
Trigger: ACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCC...AGCATTCTCTACGACAGGGTCAAGGCTCTGTATCTCCCCTGTCTTCCTGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCATGGGAACAGGTCTCTaGCACCAAAAAGTCCAGAGC +
Preference number: 2 (lower is better)
Translates to: FQDGLSGLYAGGLDELACMGTGL*HQKVQS
Trigger: GCTCTGGACTTTTTGGTGTCAGAGACCTGTTCCCAT...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR-3UTR TCA 90 bp TTTCAAGATGGCCTGTCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCTCTCAGCCAGACGCTTaGACTCATCTTGCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: FQDGLSGLYAGGLDELACSQPDA*THLASL
Trigger: GAGAGAAGCAAGATGAGTTCAAGCGTCTGGCTGAGA...GCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGACAGGCCATCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR-3UTR TCA 90 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCAGAGGAACTCAGCAGTaGACAGTCACGGTGAATCCA +
Preference number: 2 (lower is better)
Translates to: CCKIKEKGWAWWCTPNPSRGTQQ*TVTVNP
Trigger: TGGATTCACCGTGACTGTTCACTGCTGAGTTCCTCT...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCGACTGGGTGGGCGTTTaGTTGCACTGCCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVDWVGV*LHCPGS
Trigger: GGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTC...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR GCA 90 bp GGACCAATCCGGGTGCTTACCCACTATCCTGCTGGTTTTCACTCGCTATGTAGTAGGCATGGCAGTGCATaGCTGCAGCCCAGTACTGAC +
Preference number: 2 (lower is better)
Translates to: GPIRVLTHYPAGFHSLCSRHGSA*LQPSTD
Trigger: GTCAGTACTGGGCTGCAGGCATGCACTGCCATGCCT...ACTACATAGCGAGTGAAAACCAGCAGGATAGTGGGTAAGCACCCGGATTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp CGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGATAACAACACTGCCTaGGGACATGAAAGACAGAAG +
Preference number: 2 (lower is better)
Translates to: RASMLEALMNSPARASYADNNTA*GHERQK
Trigger: CTTCTGTCTTTCATGTCCCCAGGCAGTGTTGTTATC...TGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR-3UTR CCA 90 bp CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGTGTATGAGCTCCGAGTaGAGGGAGACAAGCTTCACC +
Preference number: 2 (lower is better)
Translates to: LWGRHQRSAKCFPWPKGVCMSSE*RETSFT
Trigger: GGTGAAGCTTGTCTCCCTCCACTCGGAGCTCATACA...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp TTGGGAGCGCTCCCTTCACTTGCTTGTCTGGGGCAACTGAGCAGTTaGTGTGCTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: LGALPSLACLGQLSS*CAQETWFLMSSSES
Trigger: GGACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp TCTCTAGGTATACATAGTCGCACACATCTCTCCTCCCCGCCCCCAAGTCTAAGCACACGTGCTCACCGTTaGAATCAGAGAGCAGGGACA +
Preference number: 2 (lower is better)
Translates to: SLGIHSRTHLSSPPPSLSTRAHR*NQRAGT
Trigger: TGTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGT...GCTTAGACTTGGGGGCGGGGAGGAGAGATGTGTGCGACTATGTATACCTAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACCTTCTGGCTCAGGCCTaGATTGCTCCACTGCCCCTT +
Preference number: 2 (lower is better)
Translates to: LCCVFTVTDALNQALSADLLAQA*IAPLPL
Trigger: AAGGGGCAGTGGAGCAATGCAGGCCTGAGCCAGAAG...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TTTCATCTGCTTTGTTTCCAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGCGGGGCACAGACTTCTaGCTCAGGCCTGCATTGCTC +
Preference number: 2 (lower is better)
Translates to: FHLLCFQVTLNGSLGKVERGTDF*LRPALL
Trigger: GAGCAATGCAGGCCTGAGCCAGAAGTCTGTGCCCCG...CTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGGAAACAAAGCAGATGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp AGGAGCTTGAATGGCTCACACTTCTGCCAACTATGTCGAGCACACTaGTATCTGCTGAGGAGTTCCAGTCCCCATCTGGCGGATCAAAAG +
Preference number: 2 (lower is better)
Translates to: RSLNGSHFCQLCRAH*YLLRSSSPHLADQK
Trigger: CTTTTGATCCGCCAGATGGGGACTGGAACTCCTCAGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp TCTGTAGTTGTGGCCTGTTTCCCATGGGACTGGGTGGGCGTTTGCTaGCACTGCCCTGGCTCCTGGAATAATGTTTCTTGGGATATTCAA +
Preference number: 2 (lower is better)
Translates to: SVVVACFPWDWVGVC*HCPGSWNNVSWDIQ
Trigger: TTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTCCCATGGGAAACAGGCCACAACTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp CAGTCTGCCCAGAACCACCCAAGTCTTGTTTGCATCCTGGCTAGCTaGAAGTGTTTTCAAGCTGTAAGCTCCCATTGCAAGGGTTGGCAG +
Preference number: 2 (lower is better)
Translates to: QSAQNHPSLVCILAS*KCFQAVSSHCKGWQ
Trigger: CTGCCAACCCTTGCAATGGGAGCTTACAGCTTGAAAACACTTCAAGCTAGCCAGGATGCAAACAAGACTTGGGTGGTTCTGGGCAGACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp CAGCTGGCAGGTAGATCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTCTCAAAACTGAACTCTaGTCACAGGCTAAAAGTATT +
Preference number: 2 (lower is better)
Translates to: QLAGRSLLSCPWQTLGNPLKTEL*SQAKSI
Trigger: AATACTTTTAGCCTGTGATCAGAGTTCAGTTTTGAG...AGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGATCTACCTGCCAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR TCA 90 bp AGATGCCATGACTTGTCTTGGTTCCATTTGCCCTCATCTGAGACCATGTTTTCTCCTGCAGCCCAGTACTaGCAGGAGGTTCTTTGGGGC +
Preference number: 2 (lower is better)
Translates to: RCHDLSWFHLPSSETMFSPAAQY*QEVLWG
Trigger: GCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGG...AGAAAACATGGTCTCAGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCTCTTGCAGAATAGAGTaGACAACAGCAGCTTACACT +
Preference number: 2 (lower is better)
Translates to: HLRLVACSLSLQLKRLVCSCRIE*TTAAYT
Trigger: AGTGTAAGCTGCTGTTGTGCACTCTATTCTGCAAGA...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR GCA 90 bp CGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACAGCTGGCCGAGGTGTCCTTCTTCCCTGAGATTTaGTTGTGTTGTGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: RPSLISPDTAGKQLAEVSFFPEI*LCCART
Trigger: AGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAA...GGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp GCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCTGCAGCATCTCATCTGTGTAAATCAGGCATaGCAGTGCATGCCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: ARTLCRTLYLGSALQHLICVNQA*QCMPAA
Trigger: GGCTGCAGGCATGCACTGCCATGCCTGATTTACACA...GATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp CACTTAAGAACTGCATCAGGGTGTATTCATGTTGTTCACCTAAGGTaGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGC +
Preference number: 2 (lower is better)
Translates to: HLRTASGCIHVVHLR*VACSLSLQLKRLVC
Trigger: GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR TCA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCATTATGAGAGCCAGATaGCTGCCCTGTCCCAGTGCT +
Preference number: 2 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVIMRAR*LPCPSA
Trigger: AGCACTGGGACAGGGCAGTCATCTGGCTCTCATAAT...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR TCA 90 bp TTTGCTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCGCTCATCAGCCACTGTaGGAGCAGCTCCACTCTTCT +
Preference number: 2 (lower is better)
Translates to: FACVVPGLCVELSILALLAHQPL*EQLHSS
Trigger: AGAAGAGTGGAGCTGCTCTCACAGTGGCTGATGAGC...GAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCTCAGCTTATGCTAGGTaGCCAGCAGTTTTGTTTAAA +
Preference number: 2 (lower is better)
Translates to: CCKIKEKGWAWWCTPNPSSAYAR*PAVLFK
Trigger: TTTAAACAAAACTGCTGGTCACCTAGCATAAGCTGA...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGTGTAGTGAGATGCCATaGCTTGTCTTGGTTCCATTT +
Preference number: 2 (lower is better)
Translates to: LWGRHQRSAKCFPWPKGVCSEMP*LVLVPF
Trigger: AAATGGAACCAAGACAAGTCATGGCATCTCACTACA...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACATGCTCAAGGCCCAGTaGTGCTGCTGCTGTGGTTTA +
Preference number: 2 (lower is better)
Translates to: LCCVFTVTDALNQALSADMLKAQ*CCCCGL
Trigger: TAAACCACAGCAGCAGCAGCACTGGGCCTTGAGCAT...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TTTGCTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCTGTCGTAGAGAATGCTaGAGGGCTCTGGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: FACVVPGLCVELSILALLCRREC*RALAVA
Trigger: AGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACA...GAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp TTTAATCTGAGTCACAGTACACTTGGGAGCGCTCCCTTCACTTGCTaGTCTGGGGCAACTGAGCAGTTTGTGTGCTCAGGAAACTTGGTT +
Preference number: 2 (lower is better)
Translates to: FNLSHSTLGSAPFTC*SGATEQFVCSGNLV
Trigger: AACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAGATTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp CTAGTGGCCTGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTGCTaGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCT +
Preference number: 2 (lower is better)
Translates to: LVAWAHSEMFFPEIC*CCARTLCRTLYLGS
Trigger: AGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGCCACTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCTATATTCTTACTGAGTaGACGCCTCCTCTCCCCACG +
Preference number: 2 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVYILTE*TPPLPT
Trigger: CGTGGGGAGAGGAGGCGTTCACTCAGTAAGAATATA...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR TCA 90 bp GGTAAGGGTGTGAGTTCTGATCCCCAACATCCATGTGTAAATCAGGCATGGCAGGAGGCCCTGTGTCAGTaGGAGAAAAACCAAACTTTC +
Preference number: 2 (lower is better)
Translates to: GKGVSSDPQHPCVNQAWQEALCQ*EKNQTF
Trigger: GAAAGTTTGGTTTTTCTCTCACTGACACAGGGCCTC...CTGCCATGCCTGATTTACACATGGATGTTGGGGATCAGAACTCACACCCTTACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCCCAGGTCACTTTGAATaGCAGTCTGGGGAAAGTGGA +
Preference number: 2 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVPGHFE*QSGESG
Trigger: TCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGG...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTGCACTGCAGGTACACTaGATATACAAACATGCAGGC +
Preference number: 2 (lower is better)
Translates to: SLSLQLKRLVCEKMKTALALQVH*IYKHAG
Trigger: GCCTGCATGTTTGTATATCCAGTGTACCTGCAGTGC...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTCACTGCCCTGGCTCCTaGAATAATGTTTCTTGGGAT +
Preference number: 2 (lower is better)
Translates to: SLSLQLKRLVCEKMKTALHCPGS*NNVSWD
Trigger: ATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTG...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp TTGATTATGTCATGCCGAGCTCCGACAGCGCTTTCCGTGACTGTTTaGTGTCTGAATCTCCTCTCTCACTTCTGTTCTTGTTCCCTGTCA +
Preference number: 2 (lower is better)
Translates to: LIMSCRAPTALSVTV*CLNLLSHFCSCSLS
Trigger: TGACAGGGAACAAGAACAGAAGTGAGAGAGGAGATTCAGACACAAAACAGTCACGGAAAGCGCTGTCGGAGCTCGGCATGACATAATCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp TACCCACCTAGGAGCAGTGTCTCTCTGAAGGAGAGTGGTTTCATTTaGGGTGGGCTATGGTCGTGTGAGTATGGCATCCTTAGAATCTTT +
Preference number: 2 (lower is better)
Translates to: YPPRSSVSLKESGFI*GGLWSCEYGILRIF
Trigger: AAAGATTCTAAGGATGCCATACTCACACGACCATAGCCCACCCAAAATGAAACCACTCTCCTTCAGAGAGACACTGCTCCTAGGTGGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp ATGTCTTCCTCGGAGTCCATTATGACAGTCCTATTGGTGTCTTGTTaGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCACCTTGTGT +
Preference number: 2 (lower is better)
Translates to: MSSSESIMTVLLVSC*VSSVLLHSSSITLC
Trigger: ACACAAGGTGATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGACTGTCATAATGGACTCCGAGGAAGACAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp GAGGACAGGAAGACAGGGGAGATACAGAGCCTTGACCCTGTCGTAGAGAATGCTAGGCTCTTTGAGTGTTaGAAAATTGTTGGCCATTTC +
Preference number: 2 (lower is better)
Translates to: EDRKTGEIQSLDPVVENARLFEC*KIVGHF
Trigger: GAAATGGCCAACAATTTTTCAACACTCAAAGAGCCT...AGCATTCTCTACGACAGGGTCAAGGCTCTGTATCTCCCCTGTCTTCCTGTCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTCTCTTCTGGCCTCTATaGGCACTGCAGGTACACTGG +
Preference number: 2 (lower is better)
Translates to: VDCHGPVAISKMKRLLCSLFWPL*ALQVHW
Trigger: CCAGTGTACCTGCAGTGCCCATAGAGGCCAGAAGAG...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTTGTGTACCCTGGGCATaGGCCACTCTTGCAAAGATG +
Preference number: 2 (lower is better)
Translates to: VDCHGPVAISKMKRLLCSCVPWA*ATLAKM
Trigger: CATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACA...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp GTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCGAGACAACAGAGACTTaGATGTTTTCTTCAGTTGGG +
Preference number: 2 (lower is better)
Translates to: VLLVSCLVSSVLLHSSSIETTET*MFSSVG
Trigger: CCCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTC...GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp TCTGAAATGTTCTTCCCTGAGATTTGCTTGTGTTGTGCCAGGACTTaGTGTAGAACTCTCTATCTTGGCTCTGCTCTGCAGCATCTCATC +
Preference number: 2 (lower is better)
Translates to: SEMFFPEICLCCART*CRTLYLGSALQHLI
Trigger: GATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp ACTATCTCAGGCAGATGCACAAAAACTGCAGCCACTCCTGGTGTGTaGAGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCTGTCATGT +
Preference number: 2 (lower is better)
Translates to: TISGRCTKTAATPGV*RLYFSPGCPLFLSC
Trigger: ACATGACAGAAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CCA 90 bp AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAACAGGGGTCCCACAGCTaGCAGGTAGATCTCTCCTTT +
Preference number: 2 (lower is better)
Translates to: KLELPKQCISSQFCTSPKQGSHS*QVDLSF
Trigger: AAAGGAGAGATCTACCTGCCAGCTGTGGGACCCCTG...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TTGTCTGTTTTCTCAAGTGAAGTTCTGTGGACTGCTCAGACACTGAGCTCCCATTGTGCTCAGGAAACTTaGTTCTTGATGTCTTCCTCG +
Preference number: 2 (lower is better)
Translates to: LSVFSSEVLWTAQTLSSHCAQET*FLMSSS
Trigger: CGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACA...ATGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp AAAGTCTTGGCTGTTGTGATAGAAGATCCTCTAGGTCCAATTGTCTaGAAAGACATGACTGCTAAGTCAGGACTGGAGATGGCAACTGCT +
Preference number: 2 (lower is better)
Translates to: KVLAVVIEDPLGPIV*KDMTAKSGLEMATA
Trigger: AGCAGTTGCCATCTCCAGTCCTGACTTAGCAGTCATGTCTTTCAAGACAATTGGACCTAGAGGATCTTCTATCACAACAGCCAAGACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp ACTCCTATAGATCCAGCTTTAATTAATTACACATTATTTGGGGTTGTGCACAGCTCTCACCAGCCATCTTaGCTGAGCACACAGGCTCTC +
Preference number: 2 (lower is better)
Translates to: TPIDPALINYTLFGVVHSSHQPS*LSTQAL
Trigger: GAGAGCCTGTGTGCTCAGTCAAGATGGCTGGTGAGA...GCTGTGCACAACCCCAAATAATGTGTAATTAATTAAAGCTGGATCTATAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR GCA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCCGCATTGGCTTTCGGTaGATAAATTCTAAAGACAGT +
Preference number: 2 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVRIGFR*INSKDS
Trigger: ACTGTCTTTAGAATTTATGCACCGAAAGCCAATGCG...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACCAAATAATGTCATGGTaGGGTTACACTTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: LCCVFTVTDALNQALSADQIMSW*GYTSSV
Trigger: AACAGAGGAAGTGTAACCCCACCATGACATTATTTG...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp GTCAGTCCTACACCCGCAGGATCACACATAATCTTTTTAATTTTCTaGTGTCCGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACA +
Preference number: 2 (lower is better)
Translates to: VSPTPAGSHIIFLIF*CPSVFNLSRYCRQT
Trigger: TGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACGGACACAAGAAAATTAAAAAGATTATGTGTGATCCTGCGGGTGTAGGACTGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp ACTGAGCAGTTTGTGTGCTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGAGTCCTTTTAGGAACAGGCTaGATAATTCTCTCCATTTTG +
Preference number: 2 (lower is better)
Translates to: TEQFVCSGNLVLDVFLGVLLGTG*IILSIL
Trigger: CAAAATGGAGAGAATTATTCAGCCTGTTCCTAAAAG...GACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR TCA 90 bp TTGTCTGTTTTCTCAAGTGAAGTTCTGTGGACTGCTCAGACACTGAGCTCCCATCAAATATGGTGCATTTaGGAAGATCCCAGAGTTTAT +
Preference number: 2 (lower is better)
Translates to: LSVFSSEVLWTAQTLSSHQIWCI*EDPRVY
Trigger: ATAAACTCTGGGATCTTCTCAAATGCACCATATTTG...ATGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp AGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCTGTCATGTAAAAGCTGTTGTGCTTACCCACTATCCTaGTGGTTTTCACTCGCTATG +
Preference number: 2 (lower is better)
Translates to: RLYFSPGCPLFLSCKSCCAYPLS*WFSLAM
Trigger: CATAGCGAGTGAAAACCAGCAGGATAGTGGGTAAGC...ACAACAGCTTTTACATGACAGAAACAAGGGACAACCAGGAGAAAAATACAGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAACTGCCACGGTCCTGTTaGTATCTCAAAAATGAAGAG +
Preference number: 2 (lower is better)
Translates to: KLELPKQCISSQFCTSPKLPRSC*YLKNEE
Trigger: CTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAG...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp TGGTGTAAGATTCCTGTTGGAATGACATTTGCCAAAGTCTTGGCTGTTGTGATAGTGTTGAAAAATTGTTaGCCATTTCCAGAGCAGTCG +
Preference number: 2 (lower is better)
Translates to: WCKIPVGMTFAKVLAVVIVLKNC*PFPEQS
Trigger: CGACTGCTCTGGAAATGGCCAACAATTTTTCAACAC...TATCACAACAGCCAAGACTTTGGCAAATGTCATTCCAACAGGAATCTTACACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 90 bp AAAAGAATTTGCTTGCTCTATAGAGATAGGAAACATGATGCCCTGTaGCTTGTTCACATAAGGTCAGAGTATAGACTGCACCCTGTATCT +
Preference number: 2 (lower is better)
Translates to: KRICLLYRDRKHDAL*LVHIRSEYRLHPVS
Trigger: AGATACAGGGTGCAGTCTATACTCTGACCTTATGTGAACAAGCAACAGGGCATCATGTTTCCTATCTCTATAGAGCAAGCAAATTCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 90 bp GTTGAAAAAGGTATGTTTTATAATGGGCCTGATGTTGGTGTCCTGTaGACACTTAAGAACTGCATCAGGGTGTATTCATGTTGTTCACCT +
Preference number: 2 (lower is better)
Translates to: VEKGMFYNGPDVGVL*TLKNCIRVYSCCSP
Trigger: AGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCCATTATAAAACATACCTTTTTCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CCA 90 bp AGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTCTGTCATGTAAAAGCTGTTGTGAAGATGATGTTCCATaGGAAGATTTGCGAGACAAC +
Preference number: 2 (lower is better)
Translates to: RLYFSPGCPLFLSCKSCCEDDVP*EDLRDN
Trigger: GTTGTCTCGCAAATCTTCCCATGGAACATCATCTTC...ACAACAGCTTTTACATGACAGAAACAAGGGACAACCAGGAGAAAAATACAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR GCA 90 bp ACTCCTATAGATCCAGCTTTAATTAATTACACATTATTTGGGGTTGTGCACAGCTGGAACTGGAATGAATaGTCATGTGACTTTGCTTTT +
Preference number: 2 (lower is better)
Translates to: TPIDPALINYTLFGVVHSWNWNE*SCDFAF
Trigger: AAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCA...GCTGTGCACAACCCCAAATAATGTGTAATTAATTAAAGCTGGATCTATAGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp GGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATaGAGGCAGGCACCCAGGCATGCCCAGGTAGACCCC +
Preference number: 3 (lower is better)
Translates to: GGLDELACQGIV*RQAPRHAQVDP
Trigger: GGGGTCTACCTGGGCATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
3UTR GCA 72 bp TCGGGCCTCTATGCTGGAGGCCTTGATGAACTCGCCTaGCAGGGCATCGTATGCAGGCAGGCACCCAGGCAT +
Preference number: 3 (lower is better)
Translates to: SGLYAGGLDELA*QGIVCRQAPRH
Trigger: ATGCCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCATAGAGGCCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
3UTR GCA 72 bp CAGGCTTCAGCAGGGATGTTCTCAGCCTTCTGCTACTaGTCCCTGGGCCCTTGGCTAGCCCTGCAGAGCCAC +
Preference number: 3 (lower is better)
Translates to: QASAGMFSAFCY*SLGPWLALQSH
Trigger: GTGGCTCTGCAGGGCTAGCCAAGGGCCCAGGGAGCAGTAGCAGAAGGCTGAGAACATCCCTGCTGAAGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp CCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTTGTaGTTGGTCACAGCTCCTCCTTCTCAGCCTCCTTCT +
Preference number: 3 (lower is better)
Translates to: PFLPLANPGEPL*LVTAPPSQPPS
Trigger: AGAAGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR GCA 72 bp GTGTGCTGGACTGCCAAGCTGGGTCTGTCCTTGGCGTaGTGTATGAGCTCCGAGTGGAGGGAGACAAGCTTC +
Preference number: 3 (lower is better)
Translates to: VCWTAKLGLSLA*CMSSEWRETSF
Trigger: GAAGCTTGTCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGGACAGACCCAGCTTGGCAGTCCAGCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTaGACGCCTAATCCCAGCACTCGGGAGGCAGAGGCA +
Preference number: 3 (lower is better)
Translates to: CCKIKEKGWAWW*TPNPSTREAEA
Trigger: TGCCTCTGCCTCCCGAGTGCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp CCACAGCTGGCAGGTAGATCTCTCCTTTCCTGCCCCTaGCAAACCCTGGGGAACCCTTGTGCTTGGTCACAG +
Preference number: 3 (lower is better)
Translates to: PQLAGRSLLSCP*QTLGNPCAWSQ
Trigger: CTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGATCTACCTGCCAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR TCA 72 bp GACTTAGCACCCGTGGCGCAGCCCCACGGCTTGAAATaGACCCTGCGAGGCTGTGTATCAGAGGGTATGTTG +
Preference number: 3 (lower is better)
Translates to: DLAPVAQPHGLK*TLRGCVSEGML
Trigger: CAACATACCCTCTGATACACAGCCTCGCAGGGTTCATTTCAAGCCGTGGGGCTGCGCCACGGGTGCTAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp CTGTGGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTaGCCTGGGGACCAATCCGGGTGCTTACCCACTATC +
Preference number: 3 (lower is better)
Translates to: LWLWLRSSRKEV*PGDQSGCLPTI
Trigger: GATAGTGGGTAAGCACCCGGATTGGTCCCCAGGGCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp TTCTTGTGTCCGTCCGTCTTTAATCTCTCCAGATACTaGAGGCAAACAGCTGGCCGAGGTGTCCCCTGGGGG +
Preference number: 3 (lower is better)
Translates to: FLCPSVFNLSRY*RQTAGRGVPWG
Trigger: CCCCCAGGGGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACGGACACAAGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp CTGGGTCTGTCCTTGGCGTGCTGTATGAGCTCCGAGTaGAGGGAGACAAGCTTCACCAAGATGCAGGTCCTT +
Preference number: 3 (lower is better)
Translates to: LGLSLACCMSSE*RETSFTKMQVL
Trigger: AAGGACCTGCATCTTGGTGAAGCTTGTCTCCCTCCACTCGGAGCTCATACAGCACGCCAAGGACAGACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp GACCCTGTCGTAGAGAATGCTGGAGGGCTCTGGCTGTaGCTCTGGCTCAGATCTAGTAGGAAAGAGGTCTGC +
Preference number: 3 (lower is better)
Translates to: DPVVENAGGLWL*LWLRSSRKEVC
Trigger: GCAGACCTCTTTCCTACTAGATCTGAGCCAGAGCCACAGCCAGAGCCCTCCAGCATTCTCTACGACAGGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp CGTCCGTCTTTAATCTCTCCAGATACTGCAGGCAAACAGCTGGCCGAGGTGTCCAACACGTGCTCACCGTaGGAATCAGAGAGCAGGGAC +
Preference number: 3 (lower is better)
Translates to: RPSLISPDTAGKQLAEVSNTCSP*ESESRD
Trigger: GTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGTT...GGACACCTCGGCCAGCTGTTTGCCTGCAGTATCTGGAGAGATTAAAGACGGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp CTCACTGGCCAGCCAGCTGAGCCACATGGTGAGGTCCAGGTTCAGGGAGAAACCGTTCCATGGGAAGATTaGCGAGACAACAGAGACTTG +
Preference number: 3 (lower is better)
Translates to: LTGQPAEPHGEVQVQGETVPWED*RDNRDL
Trigger: CAAGTCTCTGTTGTCTCGCAAATCTTCCCATGGAAC...GGTTTCTCCCTGAACCTGGACCTCACCATGTGGCTCAGCTGGCTGGCCAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp GGCCTCTTGATGAGGCATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACGCTTGCTGGCGAGTGTaGCTTACATTGCCTGACCAA +
Preference number: 3 (lower is better)
Translates to: GLLMRHASVLSQAGSQSYACWRV*LTLPDQ
Trigger: TTGGTCAGGCAATGTAAGCAACACTCGCCAGCAAGC...GTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp CTGATGGGAGGCAAGGATGGACTGAGGGGCCAGACCTaGTGTTCATGGCTGTCAGTAGCACGGTTAAGGGAA +
Preference number: 3 (lower is better)
Translates to: LMGGKDGLRGQT*CSWLSVARLRE
Trigger: TTCCCTTAACCGTGCTACTGACAGCCATGAACATCAGGTCTGGCCCCTCAGTCCATCCTTGCCTCCCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp CTCTATCAGCTTACCGATCCGGGCCATCTCAGAGGCTaGAAAGTCCTCACCTTGGTCCAGGATCTTCCCCAT +
Preference number: 3 (lower is better)
Translates to: LYQLTDPGHLRG*KVLTLVQDLPH
Trigger: ATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCAGCCTCTGAGATGGCCCGGATCGGTAAGCTGATAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
3UTR CCA 72 bp CTGACCATGGTCCGTATGGACTGCATGGGCTGGCTATaGCCCTCAGGCATAGCTCCTTCCTCTAATGGTCTA +
Preference number: 3 (lower is better)
Translates to: LTMVRMDCMGWL*PSGIAPSSNGL
Trigger: TAGACCATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp TGTCAGCTGACCATGGTCCGTATGGACTGCATGGGCTaGCTATGGCCCTCAGGCATAGCTCCTTCCTCTAAT +
Preference number: 3 (lower is better)
Translates to: CQLTMVRMDCMG*LWPSGIAPSSN
Trigger: ATTAGAGGAAGGAGCTATGCCTGAGGGCCATAGCCAGCCCATGCAGTCCATACGGACCATGGTCAGCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp CTGTCCTGCTGCACAGCTCATCCATCACCTTGTGTCTaGTACCCACCTAGGAGCAGTGTCTCTCTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: LSCCTAHPSPCV*YPPRSSVSLKE
Trigger: CTCCTTCAGAGAGACACTGCTCCTAGGTGGGTACCAGACACAAGGTGATGGATGAGCTGTGCAGCAGGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp CTGAGTCACAGTACACTTGGGAGCGCTCCCTTCACTTaGTTGTCTGGGGCAACTGAGCAGTTTGTGTGCTCA +
Preference number: 3 (lower is better)
Translates to: LSHSTLGSAPFT*LSGATEQFVCS
Trigger: TGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp CATGCCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTACACCCGCAGGATCACATTCCCTGAGATTTGCTaGTGTTGTGCCAGGACTTTG +
Preference number: 3 (lower is better)
Translates to: HASVLSQAGSQSYTRRITFPEIC*CCARTL
Trigger: CAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAA...TGTGATCCTGCGGGTGTAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp GAGAATCCAGCACCCTCTTCTGGCCTCTATGGGCACTaGAGGTACACTGGATATACAAACATGCAGGCAAGC +
Preference number: 3 (lower is better)
Translates to: ENPAPSSGLYGH*RYTGYTNMQAS
Trigger: GCTTGCCTGCATGTTTGTATATCCAGTGTACCTGCAGTGCCCATAGAGGCCAGAAGAGGGTGCTGGATTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp GAGCCCAAGCCATCCTGTCAGGACTCAGGGGTAGACTaGCACGGTCCTGTTGCTATCTCAAAAATGAAGAGA +
Preference number: 3 (lower is better)
Translates to: EPKPSCQDSGVD*HGPVAISKMKR
Trigger: TCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTACCCCTGAGTCCTGACAGGATGGCTTGGGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp ACCTGCCTCTGCCTCTCAAGTGCTGGGATTAAGGCATaGGCCACCAATGCCTGGCTGTTTAATCCTAAGAAG +
Preference number: 3 (lower is better)
Translates to: TCLCLSSAGIKA*ATNAWLFNPKK
Trigger: CTTCTTAGGATTAAACAGCCAGGCATTGGTGGCGCATGCCTTAATCCCAGCACTTGAGAGGCAGAGGCAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp AGAAGTCTGACTAAGTGTGGGCCTCTTGATGAGGCATaGCAGTGTCCTCAGTCAAGCTGGCAGTCAGTCCTA +
Preference number: 3 (lower is better)
Translates to: RSLTKCGPLDEA*QCPQSSWQSVL
Trigger: TAGGACTGACTGCCAGCTTGACTGAGGACACTGGCATGCCTCATCAAGAGGCCCACACTTAGTCAGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp ACTGCTCAGACACTGAGCTCCCATTTTAGGGAAGGCTaGTCTCATGTTGGAACTGCAGTCTGCCCAGAACCA +
Preference number: 3 (lower is better)
Translates to: TAQTLSSHFREG*SHVGTAVCPEP
Trigger: TGGTTCTGGGCAGACTGCAGTTCCAACATGAGACCAGCCTTCCCTAAAATGGGAGCTCAGTGTCTGAGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTATCTCACCAGCCATCTaGACTGAGCACACAGGCTCT +
Preference number: 3 (lower is better)
Translates to: SLSLQLKRLVCEKMKTALISPAI*TEHTGS
Trigger: AGAGCCTGTGTGCTCAGTCAAGATGGCTGGTGAGAT...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR TCA 72 bp CACTTTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTaGATGGCTCACACTTCTGCCAACTATGTCGAGCAC +
Preference number: 3 (lower is better)
Translates to: HFEWQSGESGGA*MAHTSANYVEH
Trigger: GTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR TCA 72 bp CTGTTTAATCCTAAGAAGGACTCTAGGCAGCCATTATaGGAGCCAGATGACTGCCCTGTCCCAGTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: LFNPKKDSRQPL*EPDDCPVPVLL
Trigger: CAGCAGCACTGGGACAGGGCAGTCATCTGGCTCTCATAATGGCTGCCTAGAGTCCTTCTTAGGATTAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR TCA 72 bp CGGATGCTGTTAGACCTTCTACTTGAAGCAAACATGTaGGTACCTGATGGGAGGCAAGGATGGACTGAGGGG +
Preference number: 3 (lower is better)
Translates to: RMLLDLLLEANM*VPDGRQGWTEG
Trigger: CCCCTCAGTCCATCCTTGCCTCCCATCAGGTACTCACATGTTTGCTTCAAGTAGAAGGTCTAACAGCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp CACTCAGGGTTCATTTTTAGGGATTCTTCTGGTGTCTaGCCGGGAGTAGGTGTGGATGCATGCTCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: HSGFIFRDSSGV*PGVGVDACSGS
Trigger: ACTGCCAGAGCATGCATCCACACCTACTCCCGGTCAGACACCAGAAGAATCCCTAAAAATGAACCCTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp TGTTTCCCATGGGACTGGGTGGGCGTTTGCTTGCACTaGCCTGGCTCCTGGAATAATGTTTCTTGGGATATT +
Preference number: 3 (lower is better)
Translates to: CFPWDWVGVCLH*PGSWNNVSWDI
Trigger: AATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTCCCATGGGAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp CAGTGTCTTTGGGGCAGACATCAGCGTTCAGCTAAATaGTTCCCTTGGCCCAAAGGGGTGATCTATCTTCTG +
Preference number: 3 (lower is better)
Translates to: QCLWGRHQRSAK*FPWPKGVIYLL
Trigger: CAGAAGATAGATCACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAGACACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp CCTGTGTACCCTGGGCATGGGCCACTCTTGCAAAGATaGTTCACATTAATGGCCTCAGCTACAGTGTGCTTT +
Preference number: 3 (lower is better)
Translates to: PVYPGHGPLLQR*FTLMASATVCF
Trigger: AAAGCACACTGTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACGGAAAGTGGAGGAGCTaGAATGGCTCACACTTCTGC +
Preference number: 3 (lower is better)
Translates to: LCCVFTVTDALNQALSADGKWRS*NGSHFC
Trigger: GCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCC...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp CAGTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTaGTGCACAGCTCATCCATCACCTTGTGTCTGGTAC +
Preference number: 3 (lower is better)
Translates to: QSYWCLVWCLLS*CTAHPSPCVWY
Trigger: GTACCAGACACAAGGTGATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp GCCTGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTaGTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTC +
Preference number: 3 (lower is better)
Translates to: AWAHSEMFFPEI*LCCARTLCRTL
Trigger: GAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp AACAACACTGCCTGGGGACATGAAAGACAGAAGCCATaGGAACAGGTCTCTGACACCAAAAAGTCCAGAGCT +
Preference number: 3 (lower is better)
Translates to: NNTAWGHERQKP*EQVSDTKKSRA
Trigger: AGCTCTGGACTTTTTGGTGTCAGAGACCTGTTCCCATGGCTTCTGTCTTTCATGTCCCCAGGCAGTGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR CCA 72 bp TTGAATGGCAGTCTGGGGAAAGTGGAGGAGCTTGAATaGCTCACACTTCTGCCAACTATGTCGAGCACACTT +
Preference number: 3 (lower is better)
Translates to: LNGSLGKVEELE*LTLLPTMSSTL
Trigger: AAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATTCAAGCTCCTCCACTTTCCCCAGACTGCCATTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp GACTGGGTGGGCGTTTGCTTGCACTGCCCTGGCTCCTaGAATAATGTTTCTTGGGATATTCAAATTGTGCTG +
Preference number: 3 (lower is better)
Translates to: DWVGVCLHCPGS*NNVSWDIQIVL
Trigger: CAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp CACCTAAGGTTGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCTTATCTGCAGGTTTGTaGAGACTCTTCCTACTTTTT +
Preference number: 3 (lower is better)
Translates to: HLRLVACSLSLQLKRLVCLSAGL*RLFLLF
Trigger: AAAAAGTAGGAAGAGTCTCAACAAACCTGCAGATAA...GCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTGCCTTGAACACCACCTaGTGGTACTGTTCTGTAGTT +
Preference number: 3 (lower is better)
Translates to: SLSLQLKRLVCEKMKTALALNTT*WYCSVV
Trigger: AACTACAGAACAGTACCACAAGGTGGTGTTCAAGGC...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp TTGTCTGTTTTCTCAAGTGAAGTTCTGTGGACTGCTCAGACACTGAGCTCCCATGGGCAACTGAGCAGTTaGTGTGCTCAGGAAACTTGG +
Preference number: 3 (lower is better)
Translates to: LSVFSSEVLWTAQTLSSHGQLSS*CAQETW
Trigger: CCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCC...ATGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp CTCCAGAGACTGACTAGGCCAGCCTTGCTTCTAGTTTaGATGGTTAGCTTGCTGGCGAGTGTTGCTTACATT +
Preference number: 3 (lower is better)
Translates to: LQRLTRPALLLV*MVSLLASVAYI
Trigger: AATGTAAGCAACACTCGCCAGCAAGCTAACCATTCAAACTAGAAGCAAGGCTGGCCTAGTCAGTCTCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp GCCTGTTCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTaGGAGAAGATGAAAACTGCTCTTGATTATGTCATG +
Preference number: 3 (lower is better)
Translates to: ACSLSLQLKRLV*EKMKTALDYVM
Trigger: CATGACATAATCAAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGAACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp TTCACTTGCTTGTCTGGGGCAACTGAGCAGTTTGTGTaGTCAGGAAACTTGGTTCTTGATGTCTTCCTCGGA +
Preference number: 3 (lower is better)
Translates to: FTCLSGATEQFV*SGNLVLDVFLG
Trigger: TCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp TCCCTAAGCCTCCAGCTTAAGAGGCTGGTCTGCGAGAAGATGAAAACTGCTCTTCCTCCACTGGTCTTGTaGACAAATAATGTCATGGTG +
Preference number: 3 (lower is better)
Translates to: SLSLQLKRLVCEKMKTALPPLVL*TNNVMV
Trigger: CACCATGACATTATTTGTCAACAAGACCAGTGGAGG...AAGAGCAGTTTTCATCTTCTCGCAGACCAGCCTCTTAAGCTGGAGGCTTAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACGTTCAAGTTACTTCTTaGCTGTGGACGGATAGTCCT +
Preference number: 3 (lower is better)
Translates to: LCCVFTVTDALNQALSADVQVTS*LWTDSP
Trigger: AGGACTATCCGTCCACAGCAAAGAAGTAACTTGAAC...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp GGACCAATCCGGGTGCTTACCCACTATCCTGCTGGTTTTCACTCGCTATGTAGTAGGTCCTTAGGCTCTTaGAGTGTTGAAAAATTGTTG +
Preference number: 3 (lower is better)
Translates to: GPIRVLTHYPAGFHSLCSRSLGS*SVEKLL
Trigger: CAACAATTTTTCAACACTCAAAGAGCCTAAGGACCT...ACTACATAGCGAGTGAAAACCAGCAGGATAGTGGGTAAGCACCCGGATTGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp CTCTGCTCTGCAGCATCTCATCCGATAATTTTAATCTaGGTCACAGTACACTTGGGAGCGCTCCCTTCACTT +
Preference number: 3 (lower is better)
Translates to: LCSAASHPIILI*VTVHLGALPSL
Trigger: AAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACTCAGATTAAAATTATCGGATGAGATGCTGCAGAGCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp GCAGATGCACAAAAACTGCAGCCACTCCTGGTGTGTTaGGACTGTATTTTTCTCCTGGTTGTCCCTTGTTTC +
Preference number: 3 (lower is better)
Translates to: ADAQKLQPLLVC*DCIFLLVVPCF
Trigger: GAAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp CAAAACGTTAGGAAGATTCCTTTATACACAAACACGTaGTCACCGTTGGAATCAGAGAGCAGGGACACAGCC +
Preference number: 3 (lower is better)
Translates to: QNVRKIPLYTNT*SPLESESRDTA
Trigger: GGCTGTGTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGTTTGTGTATAAAGGAATCTTCCTAACGTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp GTAATGTGGCATTTGAAGAGGACTATCTCAGGCAGATaGACAAAAACTGCAGCCACTCCTGGTGTGTTGAGA +
Preference number: 3 (lower is better)
Translates to: VMWHLKRTISGR*TKTAATPGVLR
Trigger: TCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTCAAATGCCACATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp ATATTCCTGAGGTGTAAATCCTGTGTACCCTGGGCATaGGCCACTCTTGCAAAGATGGTTCACATTAATGGC +
Preference number: 3 (lower is better)
Translates to: IFLRCKSCVPWA*ATLAKMVHING
Trigger: GCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp TGCTTGCACTGCCCTGGCTCCTGGAATAATGTTTCTTaGGATATTCAAATTGTGCTGTGTGTTCACGGTCAC +
Preference number: 3 (lower is better)
Translates to: CLHCPGSWNNVS*DIQIVLCVHGH
Trigger: GTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp TATCTCAGGCAGATGCACAAAAACTGCAGCCACTCCTaGTGTGTTGAGACTGTATTTTTCTCCTGGTTGTCC +
Preference number: 3 (lower is better)
Translates to: YLRQMHKNCSHS*CVETVFFSWLS
Trigger: GGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCGGCATTTCATCTGCTTaGTTTCCAGGTCACTTTGAA +
Preference number: 3 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVGISSA*FPGHFE
Trigger: TTCAAAGTGACCTGGAAACAAAGCAGATGAAATGCC...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp GTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCACATTTGCCAAAGTCTaGGCTGTTGTGATAGAAGAT +
Preference number: 3 (lower is better)
Translates to: VLLVSCLVSSVLLHSSSITFAKV*AVVIED
Trigger: ATCTTCTATCACAACAGCCAAGACTTTGGCAAATGT...GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp GAACCCTGCGAGGCTGTGTATCAGAGGGTATGTTGTTaGCTATTGGCCTATTTTTCTCCTGGGCAAATTACT +
Preference number: 3 (lower is better)
Translates to: EPCEAVYQRVCC*LLAYFSPGQIT
Trigger: AGTAATTTGCCCAGGAGAAAAATAGGCCAATAGTCAACAACATACCCTCTGATACACAGCCTCGCAGGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp TGGTCTTTCCCATGGACTGCTCCAGCAGCACACCATTaGATTCTTTATCGTAACTGTCTGGGATTCACAAAT +
Preference number: 3 (lower is better)
Translates to: WSFPWTAPAAHH*ILYRNCLGFTN
Trigger: ATTTGTGAATCCCAGACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp GGGCCTGATGTTGGTGTCCTGTTGACACTTAAGAACTaGATCAGGGTGTATTCATGTTGTTCACCTAAGGTT +
Preference number: 3 (lower is better)
Translates to: GPDVGVLLTLKN*IRVYSCCSPKV
Trigger: AACCTTAGGTGAACAACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp ACTATCCTGCTGGTTTTCACTCGCTATGTAGTGAGATaGCATGACTTGTCTTGGTTCCATTTGCCCTCATCT +
Preference number: 3 (lower is better)
Translates to: TILLVFTRYVVR*HDLSWFHLPSS
Trigger: AGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCTCACTACATAGCGAGTGAAAACCAGCAGGATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp TCACATATATTCCTGAGGTGTAAATCCTGTGTACCCTaGGCATGGGCCACTCTTGCAAAGATGGTTCACATT +
Preference number: 3 (lower is better)
Translates to: SHIFLRCKSCVP*AWATLAKMVHI
Trigger: AATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATATATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp GTCCTATTGGTGTCTTGTTTGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATCGCATCCTTAGAATCTTaGAATATAGCACAGTTTGTC +
Preference number: 3 (lower is better)
Translates to: VLLVSCLVSSVLLHSSSIASLES*NIAQFV
Trigger: GACAAACTGTGCTATATTCAAAGATTCTAAGGATGC...GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp TTCACCAAGATGCAGGTCCTTAGGCTCTTTGAGTGTTaGAAAATTGTTGGCCATTTCCAGAGCAGTCGTCTA +
Preference number: 3 (lower is better)
Translates to: FTKMQVLRLFEC*KIVGHFQSSRL
Trigger: TAGACGACTGCTCTGGAAATGGCCAACAATTTTTCAACACTCAAAGAGCCTAAGGACCTGCATCTTGGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp ATGGTTAGCTTGCTGGCGAGTGTTGCTTACATTGCCTaGCCAAGGGAGTATTTATACCAAGGTGATGTCTTT +
Preference number: 3 (lower is better)
Translates to: MVSLLASVAYIA*PREYLYQGDVF
Trigger: AAAGACATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAAGCAACACTCGCCAGCAAGCTAACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp TTCTGTCATGTAAAAGCTGTTGTCTGTTTTCTCAAGTaGAGTTCTGTGGACTGCTCAGACACTGAGCTCCCA +
Preference number: 3 (lower is better)
Translates to: FCHVKAVVCFLK*SSVDCSDTELP
Trigger: TGGGAGCTCAGTGTCTGAGCAGTCCACAGAACTTCACTTGAGAAAACAGACAACAGCTTTTACATGACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp ATGATCATCTGCCTGCAGAATGTGTGGAGACTGCATTaGCGTGACATATGCAAATCCCTTAAACACATTCAG +
Preference number: 3 (lower is better)
Translates to: MIICLQNVWRLH*RDICKSLKHIQ
Trigger: CTGAATGTGTTTAAGGGATTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAGGCAGATGATCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp TTTGAAGAGGACTATCTCAGGCAGATGCACAAAAACTaGAGCCACTCCTGGTGTGTTGAGACTGTATTTTTC +
Preference number: 3 (lower is better)
Translates to: FEEDYLRQMHKN*SHSWCVETVFF
Trigger: GAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCCTGAGATAGTCCTCTTCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp CCTTGGTTTTTCATTTTTAAGGATAACAACACTGCCTaGGGACATGAAAGACAGAAGCCATGGGAACAGGTC +
Preference number: 3 (lower is better)
Translates to: PWFFIFKDNNTA*GHERQKPWEQV
Trigger: GACCTGTTCCCATGGCTTCTGTCTTTCATGTCCCCAGGCAGTGTTGTTATCCTTAAAAATGAAAAACCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
3UTR CCA 72 bp TTCACTCGCTATGTAGTGAGATGCCATGACTTGTCTTaGTTCCATTTGCCCTCATCTGAGACCATGTTTTCT +
Preference number: 3 (lower is better)
Translates to: FTRYVVRCHDLS*FHLPSSETMFS
Trigger: AGAAAACATGGTCTCAGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCTCACTACATAGCGAGTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp TCTCTGAAGGAGAGTGGTTTCATTTTGGGTGGGCTATaGTCGTGTGAGTATGGCATCCTTAGAATCTTTGAA +
Preference number: 3 (lower is better)
Translates to: SLKESGFILGGL*SCEYGILRIFE
Trigger: TTCAAAGATTCTAAGGATGCCATACTCACACGACCATAGCCCACCCAAAATGAAACCACTCTCCTTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp TTCCCTGTCACTTTATTCCTGAGAGTAACTGTAAGGTaGAAAGATGACTTGGTGAGGACTGGTCTTTCCCAT +
Preference number: 3 (lower is better)
Translates to: FPVTLFLRVTVR*KDDLVRTGLSH
Trigger: ATGGGAAAGACCAGTCCTCACCAAGTCATCTTTTCACCTTACAGTTACTCTCAGGAATAAAGTGACAGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp CAAAGATGGTTCACATTAATGGCCTCAGCTACAGTGTaGTTTGCTTCAATTGAACACAGGGCATTTCATCTG +
Preference number: 3 (lower is better)
Translates to: QRWFTLMASATV*FASIEHRAFHL
Trigger: CAGATGAAATGCCCTGTGTTCAATTGAAGCAAAGCACACTGTAGCTGAGGCCATTAATGTGAACCATCTTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp GGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCTaGAGCATCTCATCCGATAATTTTAATCTGAGTCAC +
Preference number: 3 (lower is better)
Translates to: GLCVELSILALL*SISSDNFNLSH
Trigger: GTGACTCAGATTAAAATTATCGGATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CCA 72 bp ATGTGTGCAAACTACTTTCTTACTTGTAGGATGTGCTaGAGCCTACATCATGGTTGCATCAGAGTATCACGT +
Preference number: 3 (lower is better)
Translates to: MCANYFLTCRMC*SLHHGCIRVSR
Trigger: ACGTGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp TGTTGGAATGACATTTGCCAAAGTCTTGGCTGTTGTGATAGAAGATCCTCTAGGAGTGTTGAAAAATTGTaGGCCATTTCCAGAGCAGTC +
Preference number: 3 (lower is better)
Translates to: CWNDICQSLGCCDRRSSRSVEKL*AISRAV
Trigger: GACTGCTCTGGAAATGGCCAACAATTTTTCAACACT...CCTAGAGGATCTTCTATCACAACAGCCAAGACTTTGGCAAATGTCATTCCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR-3UTR CAA 90 bp TGGTGTAAGATTCCTGTTGGAATGACATTTGCCAAAGTCTTGGCTGTTGTGATACGAGACAACAGAGACTaGGATGTTTTCTTCAGTTGG +
Preference number: 3 (lower is better)
Translates to: WCKIPVGMTFAKVLAVVIRDNRD*DVFFSW
Trigger: CCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTCG...TATCACAACAGCCAAGACTTTGGCAAATGTCATTCCAACAGGAATCTTACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp AGAAGATCCCAGAGTTTATCGCTTTTAGGAACAGGCTaGATAATTCTCTCCATTTTGCACAAGTACGCACTG +
Preference number: 3 (lower is better)
Translates to: RRSQSLSLLGTG*IILSILHKYAL
Trigger: CAGTGCGTACTTGTGCAAAATGGAGAGAATTATTCAGCCTGTTCCTAAAAGCGATAAACTCTGGGATCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp CTGCAGAATGTGTGGAGACTGCATTGCCGTGACATATaGAAATCCCTTAAACACATTCAGCTCAAAATAGAA +
Preference number: 3 (lower is better)
Translates to: LQNVWRLHCRDI*KSLKHIQLKIE
Trigger: TTCTATTTTGAGCTGAATGTGTTTAAGGGATTTGCATATGTCACGGCAATGCAGTCTCCACACATTCTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp GAAATGTGTGCAAACTACTTTCTTACTTGTAGGATGTaGTGGAGCCTACATCATGGTTGCATCAGAGTATCA +
Preference number: 3 (lower is better)
Translates to: EMCANYFLTCRM*WSLHHGCIRVS
Trigger: TGATACTCTGATGCAACCATGATGTAGGCTCCAGCACATCCTACAAGTAAGAAAGTAGTTTGCACACATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR-3UTR CAA 90 bp AATGACATTTGCCAAAGTCTTGGCTGTTGTGATAGAAGATCCTCTAGGTCCAATTTGAGTGTTGAAAAATaGTTGGCCATTTCCAGAGCA +
Preference number: 3 (lower is better)
Translates to: NDICQSLGCCDRRSSRSNLSVEK*LAISRA
Trigger: TGCTCTGGAAATGGCCAACAATTTTTCAACACTCAA...ATTGGACCTAGAGGATCTTCTATCACAACAGCCAAGACTTTGGCAAATGTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR TCA 72 bp ATTAAAATACTAGTCTTTAGATCTCACATATATTCCTaGGGTGTAAATCCTGTGTACCCTGGGCATGGGCCA +
Preference number: 3 (lower is better)
Translates to: IKILVFRSHIYS*GVNPVYPGHGP
Trigger: TGGCCCATGCCCAGGGTACACAGGATTTACACCTCAGGAATATATGTGAGATCTAAAGACTAGTATTTTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR TCA 72 bp TTACATTGCCTGACCAAGGGAGTATTTATACCAAGGTaGTGTCTTTCCTCCTCAGACCTCAGAATACATTAT +
Preference number: 3 (lower is better)
Translates to: LHCLTKGVFIPR*CLSSSDLRIHY
Trigger: ATAATGTATTCTGAGGTCTGAGGAGGAAAGACATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR GCA 72 bp GCTCCTGGAATAATGTTTCTTGGGATATTCAAATTGTaGTGTGTGTTCACGGTCACAGATGCTCTAAATCAA +
Preference number: 3 (lower is better)
Translates to: APGIMFLGIFKL*CVFTVTDALNQ
Trigger: TTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp TCAACTCTAGCTTCTCTGTATCCCACAAACATTGCATaGGTCCCAGTAAGAGTTAAAACTGAGATCCTTTTT +
Preference number: 3 (lower is better)
Translates to: STLASLYPTNIA*VPVRVKTEILF
Trigger: AAAAAGGATCTCAGTTTTAACTCTTACTGGGACCCATGCAATGTTTGTGGGATACAGAGAAGCTAGAGTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp TGCTCAAAACAGAGATGTCACCGCATTGGCTTTCGGTaGATAAATTCTAAAGACAGTACATTAGTAAAAGAA +
Preference number: 3 (lower is better)
Translates to: CSKQRCHRIGFR*INSKDSTLVKE
Trigger: TTCTTTTACTAATGTACTGTCTTTAGAATTTATGCACCGAAAGCCAATGCGGTGACATCTCTGTTTTGAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CCA 72 bp TTGTGGGAGAGTAACTTATATTTTACATGTTGGAACTaGAATGAATGCTCATGTGACTTTGCTTTTGACACA +
Preference number: 3 (lower is better)
Translates to: LWESNLYFTCWN*NECSCDFAFDT
Trigger: TGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAACATGTAAAATATAAGTTACTCTCCCACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR GCA 72 bp AATTCTAAAGACAGTACATTAGTAAAAGAATTTGCTTaGTCTATAGAGATAGGAAACATGATGCCCTGTTGC +
Preference number: 3 (lower is better)
Translates to: NSKDSTLVKEFA*SIEIGNMMPCC
Trigger: GCAACAGGGCATCATGTTTCCTATCTCTATAGAGCAAGCAAATTCTTTTACTAATGTACTGTCTTTAGAATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR GCA 90 bp ATGCTGGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGGCAGGCACAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: MLEALMNSPARASYAGRHRPLPP*GAKRSS
Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...GTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCCAGCAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
CDS-3UTR CCA 90 bp GGAGGCCTTGATGAACTCGCCTGCCAGGGCATCGTATGCAGGCAGGCACCCAGGGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGLDELACQGIVCRQAPREHGQQ*GERSSA
Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...CCTGGGTGCCTGCCTGCATACGATGCCCTGGCAGGCGAGTTCATCAAGGCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
CDS-3UTR CCA 90 bp CAGCTGGCAGGTAGATCTCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: QLAGRSLLSCPWQTLGNPEHGQQ*GERSSA
Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...AGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGAGATCTACCTGCCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000052590.8
ENSMUST00000130451.2
CDS-3UTR GCA 90 bp CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LWGRHQRSAKCFPWPKGVRPLPP*GAKRSS
Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR CCA 90 bp CAGGCACACTCGGGGCACAGACTTCTGGCTCAGGCCTGCATTGCTCCACTGCCCGGCCATCTCAGAGGCTaGAAAGTCCTCACCTTGGTC +
Preference number: 4 (lower is better)
Translates to: QAHSGHRLLAQACIAPLPGHLRG*KVLTLV
Trigger: GACCAAGGTGAGGACTTTCCAGCCTCTGAGATGGCC...GGGCAGTGGAGCAATGCAGGCCTGAGCCAGAAGTCTGTGCCCCGAGTGTGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp GTGCATGCCTGCAGCCCAGTACTGACAGGAGGTTCTTaGGGGCTCACTGGCCAGCCAGCTGAGCCACATGGT +
Preference number: 4 (lower is better)
Translates to: VHACSPVLTGGS*GLTGQPAEPHG
Trigger: ACCATGTGGCTCAGCTGGCTGGCCAGTGAGCCCCAAAGAACCTCCTGTCAGTACTGGGCTGCAGGCATGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TCTCCTTTCCTGCCCCTGGCAAACCCTGGGGAACCCTaGTGCTTGGTCACAGCTCCTCCTTCTCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SPFLPLANPGEP*CLVTAPPSQPP
Trigger: AGGAGGCTGAGAAGGAGGAGCTGTGACCAAGCACAAGGGTTCCCCAGGGTTTGCCAGGGGCAGGAAAGGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
CDS-3UTR GCA 90 bp CATCTCAGAGGCTGGAAAGTCCTCACCTTGGTCCAGGATCTTCCCCATGATCTTAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: HLRGWKVLTLVQDLPHDLRPLPP*GAKRSS
Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...AAGATCATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCAGCCTCTGAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000052590.8
CDS-3UTR CCA 90 bp ACCAAGAGCTCCTCGCTGGAGGCTGAGTTCTCAGCCAGACGCTTGAACTCATCTGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: TKSSSLEAEFSARRLNSSEHGQQ*GERSSA
Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...AGATGAGTTCAAGCGTCTGGCTGAGAACTCAGCCTCCAGCGAGGAGCTCTTGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000111802.4
CDS-3UTR TCA 90 bp TGCTGCAAGATTAAAGAGAAGGGCTGGGCGTGGTGGTGCACGCCTAATCCCAGCGTTCTTGGACCTTCCTaGTGGAAGGCCTCCATGACC +
Preference number: 4 (lower is better)
Translates to: CCKIKEKGWAWWCTPNPSVLGPS*WKASMT
Trigger: GGTCATGGAGGCCTTCCATCAGGAAGGTCCAAGAAC...GCTGGGATTAGGCGTGCACCACCACGCCCAGCCCTTCTCTTTAATCTTGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp GTGGCCTGTTTCCCATGGGACTGGGTGGGCGTTTGCTaGCACTGCCCTGGCTCCTGGAATAATGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: VACFPWDWVGVC*HCPGSWNNVSW
Trigger: CCAAGAAACATTATTCCAGGAGCCAGGGCAGTGCAAGCAAACGCCCACCCAGTCCCATGGGAAACAGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp CTGGCAGTAGTCTTTAGAGTGCTTATGGCCGCTTGTTaGGCTGTGTCCCATGAGGCGCCAGGCTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LAVVFRVLMAAC*AVSHEAPGFSR
Trigger: CCTGCTGAAGCCTGGCGCCTCATGGGACACAGCCAAACAAGCGGCCATAAGCACTCTAAAGACTACTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp AGTCACAGTACACTTGGGAGCGCTCCCTTCACTTGCTaGTCTGGGGCAACTGAGCAGTTTGTGTGCTCAGGA +
Preference number: 4 (lower is better)
Translates to: SHSTLGSAPFTC*SGATEQFVCSG
Trigger: TCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAGCGCTCCCAAGTGTACTGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp AATGGCTCACACTTCTGCCAACTATGTCGAGCACACTaGTATCTGCTGAGGAGTTCCAGTCCCCATCTGGCG +
Preference number: 4 (lower is better)
Translates to: NGSHFCQLCRAH*YLLRSSSPHLA
Trigger: CGCCAGATGGGGACTGGAACTCCTCAGCAGATACAAGTGTGCTCGACATAGTTGGCAGAAGTGTGAGCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR GCA 90 bp AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAAAGGCCGCTGCCGCCGTaGGGAGCAAAGAGGAGCAGC +
Preference number: 4 (lower is better)
Translates to: KLELPKQCISSQFCTSPKRPLPP*GAKRSS
Trigger: GCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCT...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR TCA 90 bp TCTCTAGGTATACATAGTCGCACACATCTCTCCTCCCCGCCCCCAAGTCTAAGCCTCTGGTCACATAGATaGGAAGCACAGTCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: SLGIHSRTHLSSPPPSLSLWSHR*EAQSSE
Trigger: TTCTGAAGACTGTGCTTCTCATCTATGTGACCAGAG...GCTTAGACTTGGGGGCGGGGAGGAGAGATGTGTGCGACTATGTATACCTAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR CCA 90 bp CATCTGAGACCATGTTTTCTAAAGTCAATCCTTTCGCTCGTTCCAGGAAAAGAAGAGCACGGACAGCAGTaGGGAGAGAGAAGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: HLRPCFLKSILSLVPGKEEHGQQ*GERSSA
Trigger: GGCGCTGCTTCTCTCTCCCCACTGCTGTCCGTGCTC...TTCTTTTCCTGGAACGAGCGAAAGGATTGACTTTAGAAAACATGGTCTCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR CCA 90 bp CTTTCCCATGGACTGCTCCAGCAGCACACCATTGCATTCTTTATCGTAACTGTCGGAAAGTCCTCACCTTaGTCCAGGATCTTCCCCATG +
Preference number: 4 (lower is better)
Translates to: LSHGLLQQHTIAFFIVTVGKSSP*SRIFPM
Trigger: CATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCC...GACAGTTACGATAAAGAATGCAATGGTGTGCTGCTGGAGCAGTCCATGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp GGTGTAAATCCTGTGTACCCTGGGCATGGGCCACTCTaGCAAAGATGGTTCACATTAATGGCCTCAGCTACA +
Preference number: 4 (lower is better)
Translates to: GVNPVYPGHGPL*QRWFTLMASAT
Trigger: TGTAGCTGAGGCCATTAATGTGAACCATCTTTGCAAGAGTGGCCCATGCCCAGGGTACACAGGATTTACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp TCATGCCGAGCTCCGACAGCGCTTTCCGTGACTGTTTaGTGTCTGAATCTCCTCTCTCACTTCTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: SCRAPTALSVTV*CLNLLSHFCSC
Trigger: ACAAGAACAGAAGTGAGAGAGGAGATTCAGACACAAAACAGTCACGGAAAGCGCTGTCGGAGCTCGGCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp ACTGCATCAGGGTGTATTCATGTTGTTCACCTAAGGTaGGTGGCCTGTTCCCTAAGCCTCCAGCTTAAGAGG +
Preference number: 4 (lower is better)
Translates to: TASGCIHVVHLR*VACSLSLQLKR
Trigger: CCTCTTAAGCTGGAGGCTTAGGGAACAGGCCACCAACCTTAGGTGAACAACATGAATACACCCTGATGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp AGGAAGATTCCTTTATACACAAACACGTGCTCACCGTaGGAATCAGAGAGCAGGGACACAGCCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: RKIPLYTNTCSP*ESESRDTAHPS
Trigger: AGAGGGATGGGCTGTGTCCCTGCTCTCTGATTCCAACGGTGAGCACGTGTTTGTGTATAAAGGAATCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp CTCCCTTCACTTGCTTGTCTGGGGCAACTGAGCAGTTaGTGTGCTCAGGAAACTTGGTTCTTGATGTCTTCC +
Preference number: 4 (lower is better)
Translates to: LPSLACLGQLSS*CAQETWFLMSS
Trigger: GGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTGCCCCAGACAAGCAAGTGAAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR TCA 90 bp GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTCTTGTCGCCATAGTCTaGGATCCCCACCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VDCHGPVAISKMKRLLCSLVAIV*DPHLCH
Trigger: GTGGCAGAGGTGGGGATCTCAGACTATGGCGACAAG...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR CCA 90 bp TTTGCTTGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTTGGCTCTGCTCCCCCAGTTCAGTTCTTaGACCTTCCTGATGGAAGGC +
Preference number: 4 (lower is better)
Translates to: FACVVPGLCVELSILALLPQFSS*TFLMEG
Trigger: GCCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGG...GAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TCGGAGTCCATTATGACAGTCCTATTGGTGTCTTGTTaGGTGTCTTCTGTCCTGCTGCACAGCTCATCCATC +
Preference number: 4 (lower is better)
Translates to: SESIMTVLLVSC*VSSVLLHSSSI
Trigger: GATGGATGAGCTGTGCAGCAGGACAGAAGACACCAAACAAGACACCAATAGGACTGTCATAATGGACTCCGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR TCA 90 bp TTTCATCTGCTTTGTTTCCAGGTCACTTTGAATGGCAGTCTGGGGAAAGTGGAGTCTCAGCCAGACGCTTaGACTCATCTTGCTTCTCTC +
Preference number: 4 (lower is better)
Translates to: FHLLCFQVTLNGSLGKVESQPDA*THLASL
Trigger: GAGAGAAGCAAGATGAGTTCAAGCGTCTGGCTGAGA...CTCCACTTTCCCCAGACTGCCATTCAAAGTGACCTGGAAACAAAGCAGATGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR TCA 90 bp CATCTGAGACCATGTTTTCTAAAGTCAATCCTTTCGCTCGTTCCAGGAAAAGAAGGGAAGGGCTCGCCATaGACCCCAGTTCAGTTCTTG +
Preference number: 4 (lower is better)
Translates to: HLRPCFLKSILSLVPGKEGKGSP*TPVQFL
Trigger: CAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCC...TTCTTTTCCTGGAACGAGCGAAAGGATTGACTTTAGAAAACATGGTCTCAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR GCA 90 bp TCTCCACATGATGGAGAGTGCACAAACCTAGGTGTGCTGCCATCAATTTTGTATGGCTCCAACCTTAACTaGCCCATTGTACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: SPHDGECTNLGVLPSILYGSNLN*PIVQHR
Trigger: CCTGTGCTGTACAATGGGGCAGTTAAGGTTGGAGCC...ATACAAAATTGATGGCAGCACACCTAGGTTTGTGCACTCTCCATCATGTGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR TCA 90 bp ACTCCTATAGATCCAGCTTTAATTAATTACACATTATTTGGGGTTGTGCACAGCCTCCTCGCTGGAGGCTaGGTTCTCAGCCAGACGCTT +
Preference number: 4 (lower is better)
Translates to: TPIDPALINYTLFGVVHSLLAGG*VLSQTL
Trigger: AAGCGTCTGGCTGAGAACTCAGCCTCCAGCGAGGAG...GCTGTGCACAACCCCAAATAATGTGTAATTAATTAAAGCTGGATCTATAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp CTGGTTTTCACTCGCTATGTAGTGAGATGCCATGACTaGTCTTGGTTCCATTTGCCCTCATCTGAGACCATG +
Preference number: 4 (lower is better)
Translates to: LVFTRYVVRCHD*SWFHLPSSETM
Trigger: CATGGTCTCAGATGAGGGCAAATGGAACCAAGACAAGTCATGGCATCTCACTACATAGCGAGTGAAAACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TTCTTCCCTGAGATTTGCTTGTGTTGTGCCAGGACTTaGTGTAGAACTCTCTATCTTGGCTCTGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: FFPEICLCCART*CRTLYLGSALQ
Trigger: CTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp CAGAACCACCCAAGTCTTGTTTGCATCCTGGCTAGCTaGAAGTGTTTTCAAGCTGTAAGCTCCCATTGCAAG +
Preference number: 4 (lower is better)
Translates to: QNHPSLVCILAS*KCFQAVSSHCK
Trigger: CTTGCAATGGGAGCTTACAGCTTGAAAACACTTCAAGCTAGCCAGGATGCAAACAAGACTTGGGTGGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp GGCAGATGCACAAAAACTGCAGCCACTCCTGGTGTGTaGAGACTGTATTTTTCTCCTGGTTGTCCCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GRCTKTAATPGV*RLYFSPGCPLF
Trigger: AAACAAGGGACAACCAGGAGAAAAATACAGTCTCAACACACCAGGAGTGGCTGCAGTTTTTGTGCATCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp GTTGGAACTGGAATGAATGCTCATGTGACTTTGCTTTaGACACAGTCTTATGTAGCACAGGCTGGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VGTGMNAHVTLL*TQSYVAQAGPQ
Trigger: CTGAGGACCAGCCTGTGCTACATAAGACTGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp CAACTGAGCAGTTTGTGTGCTCAGGAAACTTGGTTCTaGATGTCTTCCTCGGAGTCCATTATGACAGTCCTA +
Preference number: 4 (lower is better)
Translates to: QLSSLCAQETWF*MSSSESIMTVL
Trigger: TAGGACTGTCATAATGGACTCCGAGGAAGACATCAAGAACCAAGTTTCCTGAGCACACAAACTGCTCAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TGGGCCCACTCTGAAATGTTCTTCCCTGAGATTTGCTaGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTAT +
Preference number: 4 (lower is better)
Translates to: WAHSEMFFPEIC*CCARTLCRTLY
Trigger: ATAGAGAGTTCTACACAAAGTCCTGGCACAACACAAGCAAATCTCAGGGAAGAACATTTCAGAGTGGGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp AGACAAGCTTCACCAAGATGCAGGTCCTTAGGCTCTTaGAGTGTTGAAAAATTGTTGGCCATTTCCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RQASPRCRSLGS*SVEKLLAISRA
Trigger: TGCTCTGGAAATGGCCAACAATTTTTCAACACTCAAAGAGCCTAAGGACCTGCATCTTGGTGAAGCTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TTTGCGAGACAACAGAGACTTGGATGTTTTCTTCAGTaGGGATCCAAAAGACAGGTAAGAGGAACTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FARQQRLGCFLQ*GSKRQVRGTQQ
Trigger: CTGCTGAGTTCCTCTTACCTGTCTTTTGGATCCCAACTGAAGAAAACATCCAAGTCTCTGTTGTCTCGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TTTGAATGGTTAGCTTGCTGGCGAGTGTTGCTTACATaGCCTGACCAAGGGAGTATTTATACCAAGGTGATG +
Preference number: 4 (lower is better)
Translates to: FEWLACWRVLLT*PDQGSIYTKVM
Trigger: CATCACCTTGGTATAAATACTCCCTTGGTCAGGCAATGTAAGCAACACTCGCCAGCAAGCTAACCATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TGTGTTGTGCCAGGACTTTGTGTAGAACTCTCTATCTaGGCTCTGCTCTGCAGCATCTCATCCGATAATTTT +
Preference number: 4 (lower is better)
Translates to: CVVPGLCVELSI*ALLCSISSDNF
Trigger: AAAATTATCGGATGAGATGCTGCAGAGCAGAGCCAAGATAGAGAGTTCTACACAAAGTCCTGGCACAACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
3UTR CAA 72 bp TTACATGTTGGAACTGGAATGAATGCTCATGTGACTTaGCTTTTGACACAGTCTTATGTAGCACAGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LHVGTGMNAHVT*LLTQSYVAQAG
Trigger: ACCAGCCTGTGCTACATAAGACTGTGTCAAAAGCAAAGTCACATGAGCATTCATTCCAGTTCCAACATGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp CTGGCTCCTGGAATAATGTTTCTTGGGATATTCAAATaGTGCTGTGTGTTCACGGTCACAGATGCTCTAAAT +
Preference number: 4 (lower is better)
Translates to: LAPGIMFLGIFK*CCVFTVTDALN
Trigger: ATTTAGAGCATCTGTGACCGTGAACACACAGCACAATTTGAATATCCCAAGAAACATTATTCCAGGAGCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp GGTATGTTTTATAATGGGCCTGATGTTGGTGTCCTGTaGACACTTAAGAACTGCATCAGGGTGTATTCATGT +
Preference number: 4 (lower is better)
Translates to: GMFYNGPDVGVL*TLKNCIRVYSC
Trigger: ACATGAATACACCCTGATGCAGTTCTTAAGTGTCAACAGGACACCAACATCAGGCCCATTATAAAACATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
3UTR CAA 72 bp CAGAATACATTATTCAAGCTTACAAATATGGTGCATTaGAGAAGATCCCAGAGTTTATCGCTTTTAGGAACA +
Preference number: 4 (lower is better)
Translates to: QNTLFKLTNMVH*RRSQSLSLLGT
Trigger: TGTTCCTAAAAGCGATAAACTCTGGGATCTTCTCAAATGCACCATATTTGTAAGCTTGAATAATGTATTCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS TCA 90 bp AAGGGTCAGAAGGGACCAACAGCTCAGTGGGGGAAGGGCTCGCCATaGACCCCAGTTCAGTTCTTGGACCTTCCTGATGGAAGGCCTCCA +
Preference number: 5 (lower is better)
Translates to: KGQKGPTAQWGKGSP*TPVQFLDLPDGRPP
Trigger: TGGAGGCCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCCCCACTGAGCTGTTGGTCCCTTCTGACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS CCA 90 bp CAGCTCAGTGGGGGAAGGGCTCGCCATGAACCCCAGTTCAGTTCTTaGACCTTCCTGATGGAAGGCCTCCATGACCTTGTAGAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: QLSGGRARHEPQFSS*TFLMEGLHDLVESD
Trigger: GTCACTTTCTACAAGGTCATGGAGGCCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCCCCACTGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR CAA 90 bp CTTTGGGGCAGACATCAGCGTTCAGCTAAATGCTTCCCTTGGCCCAAAGGGGTGACCCCAGTTCAGTTCTaGGACCTTCCTGATGGAAGG +
Preference number: 5 (lower is better)
Translates to: LWGRHQRSAKCFPWPKGVTPVQF*DLPDGR
Trigger: CCTTCCATCAGGAAGGTCCAAGAACTGAACTGGGGT...CACCCCTTTGGGCCAAGGGAAGCATTTAGCTGAACGCTGATGTCTGCCCCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2
CDS-3UTR CAA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACTTGCTGTCACTCATCTaGTTCTCTATCAGCTTACCG +
Preference number: 5 (lower is better)
Translates to: LCCVFTVTDALNQALSADLLSLI*FSISLP
Trigger: CGGTAAGCTGATAGAGAACAAGATGAGTGACAGCAA...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR CAA 90 bp TTGTGCTGTGTGTTCACGGTCACAGATGCTCTAAATCAAGCTCTGTCAGCTGACTGTAGCTCTTCTTTCTaGCTGTCACTCATCTTGTTC +
Preference number: 5 (lower is better)
Translates to: LCCVFTVTDALNQALSADCSSSF*LSLILF
Trigger: GAACAAGATGAGTGACAGCAAGAAAGAAGAGCTACA...GTCAGCTGACAGAGCTTGATTTAGAGCATCTGTGACCGTGAACACACAGCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR CAA 90 bp GTAGACTGCCACGGTCCTGTTGCTATCTCAAAAATGAAGAGACTACTTTGTTCTTTCTCAGCCAGACGCTaGAACTCATCTTGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VDCHGPVAISKMKRLLCSFSARR*NSSCFS
Trigger: AGAGAAGCAAGATGAGTTCAAGCGTCTGGCTGAGAA...AGAACAAAGTAGTCTCTTCATTTTTGAGATAGCAACAGGACCGTGGCAGTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS-3UTR CAA 90 bp AAGTTAGAGCTTCCAAAACAGTGTATCTCATCTCAGTTCTGTACTAGCCCTAAATGGAAAGTCCTCACCTaGGTCCAGGATCTTCCCCAT +
Preference number: 5 (lower is better)
Translates to: KLELPKQCISSQFCTSPKWKVLT*VQDLPH
Trigger: ATGGGGAAGATCCTGGACCAAGGTGAGGACTTTCCA...TTTAGGGCTAGTACAGAACTGAGATGAGATACACTGTTTTGGAAGCTCTAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000130451.2
CDS GCA 72 bp TGTCCAAGGGAAGGGCACCCTTCGTGTGTAGGCCGCTaGCGCCGTGCGGAGCAAAGAGGAGCAGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: CPREGHPSCVGR*RRAEQRGAAGP
Trigger: TGGGCCTGCTGCTCCTCTTTGCTCCGCACGGCGGCAGCGGCCTACACACGAAGGGTGCCCTTCCCTTGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000052590.8
ENSMUST00000111802.4
ENSMUST00000130451.2
ENSMUST00000153758.2
CDS TCA 72 bp AAGGGACCAACAGCTCAGTGGGGGAAGGGCTCGCCATaGACCCCAGTTCAGTTCTTGGACCTTCCTGATGGA +
Preference number: 6 (lower is better)
Translates to: KGPTAQWGKGSP*TPVQFLDLPDG
Trigger: TCCATCAGGAAGGTCCAAGAACTGAACTGGGGTTCATGGCGAGCCCTTCCCCCACTGAGCTGTTGGTCCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000153758.2