Pregenerated sensors for ERMP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046324Ensembl transcript IDs: ENSMUST00000054083.13, ENSMUST00000159692.8, ENSMUST00000162534.2
Found 248 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCTCCAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATaGAGAGGTAGAACTCTCAGCTCTGCCTGCGCCATGACAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: PSSCLEVSLPLAAFG*RGRTLSSACAMTAW Trigger: CCAGGCTGTCATGGCGCAGGCAGAGCTGAGAGTTCTACCTCTTCATCCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAACTGGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| 3UTR CCA 90 bp | CCTGATCAGGAAGTGCACTGGAAGATACCAAGGGAAGCCACAGAGTaGGGCATCCTCCTCACAGTGAGCTCGGATTGTGTCGTTGATCTC | + |
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Preference number: 1 (lower is better) Translates to: PDQEVHWKIPREATE*GILLTVSSDCVVDL Trigger: GAGATCAACGACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTGGCTTCCCTTGGTATCTTCCAGTGCACTTCCTGATCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR TCA 90 bp | GGAGTCCATGGGAATAAAACACAAAGTAGTCTCCTCCTCTGCTTGTaGCTGGGATGCCGTTGCCAAGAGACCACTGGGAAAGTGTTGATC | + |
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Preference number: 1 (lower is better) Translates to: GVHGNKTQSSLLLCL*LGCRCQETTGKVLI Trigger: GATCAACACTTTCCCAGTGGTCTCTTGGCAACGGCATCCCAGTCACAAGCAGAGGAGGAGACTACTTTGTGTTTTATTCCCATGGACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR GCA 90 bp | GAAACTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTaGGGTGCACACGTAACAGTGCTCTTGTTGACATTCAGACAGTTC | + |
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Preference number: 1 (lower is better) Translates to: ETDTYHTSNFQRLLF*GAHVTVLLLTFRQF Trigger: GAACTGTCTGAATGTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR TCA 90 bp | CACAGAGTGGGGCATCCTCCTCACAGTGAGCTCGGATTGTGTCGTTaGTCTCAGGAATGTGAGGTGTTACGTGAGACATTCCAGTATAAT | + |
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Preference number: 1 (lower is better) Translates to: HRVGHPPHSELGLCR*SQECEVLRETFQYN Trigger: ATTATACTGGAATGTCTCACGTAACACCTCACATTCCTGAGATCAACGACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR TCA 90 bp | GACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTaGCAAGGATATTGTTTGGTTTGGTTTGGTTTGGTTTTGCCTTAC | + |
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Preference number: 1 (lower is better) Translates to: DSSEGHSERRLPVLT*QGYCLVWFGLVLPY Trigger: GTAAGGCAAAACCAAACCAAACCAAACCAAACAATATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR GCA 90 bp | CAGGTAAATGACAGGAATGTGTTTGAGGGAAAAGCAGACACTGAATaGTACTCAGGAGTCAGGCCTCTGCATCAGGGCTTAGGCTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: QVNDRNVFEGKADTE*YSGVRPLHQGLGFQ Trigger: TTGGAAGCCTAAGCCCTGATGCAGAGGCCTGACTCCTGAGTAGCATTCAGTGTCTGCTTTTCCCTCAAACACATTCCTGTCATTTACCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR GCA 90 bp | CAGCCCTCCTCCTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTaGTCTGGGGAAGAAGTTTTAAGTTCTGTGCTTGCACAAATAAAG | + |
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Preference number: 1 (lower is better) Translates to: QPSSSSTSAAMLAIQ*SGEEVLSSVLAQIK Trigger: CTTTATTTGTGCAAGCACAGAACTTAAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAGGAGGAGGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR CCA 90 bp | AAGAAACACTCTCTTTGGCTTTGGACTCTCGGGATTAGAACTATATaGGAAAAAGGCTCCACTGCAGACAAGGAGGAAGGTGACCGCGCA | + |
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Preference number: 1 (lower is better) Translates to: KKHSLWLWTLGIRTI*EKGSTADKEEGDRA Trigger: TGCGCGGTCACCTTCCTCCTTGTCTGCAGTGGAGCCTTTTTCCCATATAGTTCTAATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR CCA 90 bp | AAAGAGACTGTAGGTGGAAACCCACGCCGAAGGAAAGGACCAGTCTaGGAACTTCTTCTTCAGAGCATCCAGCTGAGAGGATCTTTTGTT | + |
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Preference number: 1 (lower is better) Translates to: KETVGGNPRRRKGPV*ELLLQSIQLRGSFV Trigger: AACAAAAGATCCTCTCAGCTGGATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGTTTCCACCTACAGTCTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR CCA 90 bp | TACTCAAAGTCCATCCGCGAGATTAAAACACAAAGAGACTGTAGGTaGAAACCCACGCCGAAGGAAAGGACCAGTCTGGGAACTTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: YSKSIREIKTQRDCR*KPTPKERTSLGTSS Trigger: AGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGTTTCCACCTACAGTCTCTTTGTGTTTTAATCTCGCGGATGGACTTTGAGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR CCA 90 bp | CTCCTCCTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTaGGGAAGAAGTTTTAAGTTCTGTGCTTGCACAAATAAAGCAACC | + |
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Preference number: 1 (lower is better) Translates to: LLLFHLSSYAGNSVL*GRSFKFCACTNKAT Trigger: GGTTGCTTTATTTGTGCAAGCACAGAACTTAAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAGGAGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR TCA 90 bp | TTTATCGAATCCCATGGCATTTTCTCTTTGGACACAAGTCTGAAATaGGCAGGGTTTCTTGGAGAGACCTCGGGAGCTGGAAGATACCAG | + |
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Preference number: 1 (lower is better) Translates to: FIESHGIFSLDTSLK*AGFLGETSGAGRYQ Trigger: CTGGTATCTTCCAGCTCCCGAGGTCTCTCCAAGAAACCCTGCTCATTTCAGACTTGTGTCCAAAGAGAAAATGCCATGGGATTCGATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR CCA 90 bp | ACCGTGCTTCTTGAAGTCCTTGTACACACAAAGCTTTGTGAGCAATaGAAAAACTACCCAGACGGCACTCATGAATGCAGAGCAAAACCC | + |
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Preference number: 1 (lower is better) Translates to: TVLLEVLVHTKLCEQ*KNYPDGTHECRAKP Trigger: GGGTTTTGCTCTGCATTCATGAGTGCCGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR TCA 90 bp | TCAACTTTATCGAATCCCATGGCATTTTCTCTTTGGACACAAGTCTaGAATGAGCAGGGTTTCTTGGAGAGACCTCGGGAGCTGGAAGAT | + |
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Preference number: 1 (lower is better) Translates to: STLSNPMAFSLWTQV*NEQGFLERPRELED Trigger: ATCTTCCAGCTCCCGAGGTCTCTCCAAGAAACCCTGCTCATTTCAGACTTGTGTCCAAAGAGAAAATGCCATGGGATTCGATAAAGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR CCA 90 bp | ATGTCATTTGCAACCAGATATCATTTTAGCTCTGCACTTCAGATCTaGATGTTTTGTCCTTTCTTGCCAGGTTGTCCTGCCTGGAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: MSFATRYHFSSALQI*MFCPFLPGCPAWSH Trigger: GTGGCTCCAGGCAGGACAACCTGGCAAGAAAGGACAAAACATCCAGATCTGAAGTGCAGAGCTAAAATGATATCTGGTTGCAAATGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| 3UTR CCA 90 bp | GAACATCTCAAACACAGCCCAGATGAGGTAGAGCCCGTAAAGATATaGGATAAACATCCCCAAAAGGTACAGAGCAACAAATCTTCCTTG | + |
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Preference number: 1 (lower is better) Translates to: EHLKHSPDEVEPVKI*DKHPQKVQSNKSSL Trigger: CAAGGAAGATTTGTTGCTCTGTACCTTTTGGGGATGTTTATCCCATATCTTTACGGGCTCTACCTCATCTGGGCTGTGTTTGAGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR CCA 90 bp | ATGAAAAGTTCTACTCACGTGCTGAAGAAACACTCTCTTTGGCTTTaGACTCTCGGGATTAGAACTATATGGGAAAAAGGCTCCACTGCA | + |
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Preference number: 1 (lower is better) Translates to: MKSSTHVLKKHSLWL*TLGIRTIWEKGSTA Trigger: TGCAGTGGAGCCTTTTTCCCATATAGTTCTAATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR GCA 90 bp | CTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATaGAATGTTCAGGGGACATGTACTCAAAGTCCATCCGCGAGATTA | + |
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Preference number: 1 (lower is better) Translates to: LVLQTSLYHGRETIP*NVQGTCTQSPSARL Trigger: TAATCTCGCGGATGGACTTTGAGTACATGTCCCCTGAACATTGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR TCA 90 bp | AATCAGTTTCAGATTAACCCGGGCACAGAACATAAGCCCGTATTTTaGAATTCATTGAGCTATCAGTACTGTTACTCAGCTGTGGTTCTC | + |
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Preference number: 1 (lower is better) Translates to: NQFQINPGTEHKPVF*NSLSYQYCYSAVVL Trigger: GAGAACCACAGCTGAGTAACAGTACTGATAGCTCAATGAATTTCAAAATACGGGCTTATGTTCTGTGCCCGGGTTAATCTGAAACTGATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR GCA 90 bp | TCCTTTGTGGGTTCGAACATAGAAAGACATATGGCTTGGTCCTGTTaGTTCAAAGGTCAACTTTATCGAATCCCATGGCATTTTCTCTTT | + |
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Preference number: 1 (lower is better) Translates to: SFVGSNIERHMAWSC*FKGQLYRIPWHFLF Trigger: AAAGAGAAAATGCCATGGGATTCGATAAAGTTGACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTCTATGTTCGAACCCACAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR TCA 90 bp | GAATGTGAGGTGTTACGTGAGACATTCCAGTATAATCAAACCCATTaGTCCATATTCCAGAGTCTCTTTTTACTACGCTTCCTTCTAAGT | + |
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Preference number: 1 (lower is better) Translates to: ECEVLRETFQYNQTH*SIFQSLFLLRFLLS Trigger: ACTTAGAAGGAAGCGTAGTAAAAAGAGACTCTGGAATATGGATCAATGGGTTTGATTATACTGGAATGTCTCACGTAACACCTCACATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR GCA 90 bp | TTATGGACACACTATAAATGTGCAGTCTTCCTTCTGGGTGATTCTTaGTTCATAGGAAGCTGTGGAGGTTCAAGTACTGTCTATATTTAT | + |
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Preference number: 1 (lower is better) Translates to: LWTHYKCAVFLLGDS*FIGSCGGSSTVYIY Trigger: ATAAATATAGACAGTACTTGAACCTCCACAGCTTCCTATGAAGCAAGAATCACCCAGAAGGAAGACTGCACATTTATAGTGTGTCCATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| 3UTR TCA 90 bp | GTGTTATCCCAAAAGCTCTTTGAACATATGCTCAGTAGAGTTCATTaGCTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATC | + |
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Preference number: 1 (lower is better) Translates to: VLSQKLFEHMLSRVH*LVLQTSLYHGRETI Trigger: GATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAATGAACTCTACTGAGCATATGTTCAAAGAGCTTTTGGGATAACAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR GCA 90 bp | TTCTGGCCGTTAAGCATGCCTGAAACTGAACATCTTGTTAGTGGTTaGATAATAGTGTTAGAGAAAATGAAAATCGTTTGCATAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: FWPLSMPETEHLVSG*IIVLEKMKIVCIEK Trigger: TTTCTCTATGCAAACGATTTTCATTTTCTCTAACACTATTATGCAACCACTAACAAGATGTTCAGTTTCAGGCATGCTTAACGGCCAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGCACAGACAGCCAGGATaGAGGCCAGCACAACGTCGG | + |
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Preference number: 2 (lower is better) Translates to: LTRTTRAISRGSSSAVHTHRQPG*RPAQRR Trigger: CCGACGTTGTGCTGGCCTCCATCCTGGCTGTCTGTG...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTGACAAGGATCTCATCCTCTGTCACTaGTGGAACCTAGAGACGCCA | + |
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Preference number: 2 (lower is better) Translates to: TVLRATLRGAFLFSPDKDLILCH*WNLETP Trigger: TGGCGTCTCTAGGTTCCATCAGTGACAGAGGATGAG...ATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR GCA 90 bp | TGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGAATAGGTGTGACTCCTCACAGGAAAGCTaGTCAAGAGGCATGCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: WTREWHHLEVWPCWNRCDSSQES*SRGMLL Trigger: CAGCAGCATGCCTCTTGAGCAGCTTTCCTGTGAGGA...GTCACACCTATTCCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| 3UTR-3UTR TCA 90 bp | ACCCACGCCGAAGGAAAGGACCAGTCTGGGAACTTCTTCTTCAGAGCATCCAGCGTTCTACTCACGTGCTaGAGAAACACTCTCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: THAEGKDQSGNFFFRASSVLLTC*RNTLFG Trigger: GCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAAC...GCTGGATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATACCTCAGCAGCTATGCTaGCAATTCAGTGCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: HPCPSELPQHDMLLSSPIPQQLC*QFSALG Trigger: CCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGG...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTCTCGGATTGTGTCGTTaGTCTCAGGAATGTGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: SSSTSAAMLAIQCSGEEVLGLCR*SQECEV Trigger: CACCTCACATTCCTGAGATCAACGACACAATCCGAG...AACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR TCA 90 bp | TCATCTCATCCTCTGTCACTGATGGAACCTAGAGACGCCACAAGAGCCACTGCCAAAAGCTTCCTGTTGTaGCTTCCTCTCTCAGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: SSHPLSLMEPRDATRATAKSFLL*LPLSVE Trigger: CTCCACTGAGAGAGGAAGTCACAACAGGAAGCTTTT...GGCAGTGGCTCTTGTGGCGTCTCTAGGTTCCATCAGTGACAGAGGATGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCTCATCCTCTGTCACTGATGGAACCTAGAGACGCCACAAGAGCCACTGCCAAAGCAGACACTGAATaGTACTCAGGAGTCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSHPLSLMEPRDATRATAKADTE*YSGVRP Trigger: AGGCCTGACTCCTGAGTAGCATTCAGTGTCTGCTTT...GGCAGTGGCTCTTGTGGCGTCTCTAGGTTCCATCAGTGACAGAGGATGAGATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR CCA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATAAAGTTTCAACCGGCATaGCCAGGTATCACTGTCCCC | + |
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Preference number: 2 (lower is better) Translates to: HPCPSELPQHDMLLSSPIKFQPA*PGITVP Trigger: GGGGACAGTGATACCTGGCCATGCCGGTTGAAACTT...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGGGCAATTCAGTGCTCTaGGGAAGAAGTTTTAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: LTRTTRAISRGSSSAVHTGNSVL*GRSFKF Trigger: GAACTTAAAACTTCTTCCCCAGAGCACTGAATTGCC...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTGACAAGGATGAAAGACATATGGCTTaGTCCTGTTGCTTCAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: TVLRATLRGAFLFSPDKDERHMA*SCCFKG Trigger: ACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTC...ATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR GCA 90 bp | TCATCTCATCCTCTGTCACTGATGGAACCTAGAGACGCCACAAGAGCCACTGCCATGCTGGCAATTCAGTaGTCTGGGGAAGAAGTTTTA | + |
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Preference number: 2 (lower is better) Translates to: SSHPLSLMEPRDATRATAMLAIQ*SGEEVL Trigger: TAAAACTTCTTCCCCAGAGCACTGAATTGCCAGCAT...GGCAGTGGCTCTTGTGGCGTCTCTAGGTTCCATCAGTGACAGAGGATGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR GCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTACTCTCAGCTCTGCCTaGGCCATGACAGCCTGGATG | + |
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Preference number: 2 (lower is better) Translates to: TLCRTIFQFFILVPSVLLTLSSA*AMTAWM Trigger: CATCCAGGCTGTCATGGCGCAGGCAGAGCTGAGAGT...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| 3UTR-3UTR CCA 90 bp | CGCACAGAGAGGCATCTTACCCACCTCCACTGGCAAGTGGACTTGCCTATTTCATTTTCAGGGCCTGTTTaGAACACAAGTTCTTTCCCT | + |
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Preference number: 2 (lower is better) Translates to: RTERHLTHLHWQVDLPISFSGPV*NTSSFP Trigger: AGGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAA...TGAAATAGGCAAGTCCACTTGCCAGTGGAGGTGGGTAAGATGCCTCTCTGTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR CCA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATAAGAGACCTCGGGAGCTaGAAGATACCAGTTTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: HPCPSELPQHDMLLSSPIRDLGS*KIPVFP Trigger: AGGAAAAACTGGTATCTTCCAGCTCCCGAGGTCTCT...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR TCA 90 bp | CAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCTCTTGTTGACCTTCCTGTTCTCACCTaGCAAGGATATTGTTTGGTT | + |
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Preference number: 2 (lower is better) Translates to: QFPEAPLLRCTRNSALVDLPVLT*QGYCLV Trigger: AACCAAACAATATCCTTGTCAGGTGAGAACAGGAAG...GTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTGACGGCACTCATGAATaGAGAGCAAAACCCTTGATA | + |
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Preference number: 2 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFDGTHE*RAKPLI Trigger: TATCAAGGGTTTTGCTCTGCATTCATGAGTGCCGTC...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTCTTCTGAGACCTGCACTTCTATCCAGAACCGCCATGCAGAAGCCTGGACTTTATCGAATCCCATaGCATTTTCTCTTTGGACAC | + |
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Preference number: 2 (lower is better) Translates to: PVLLRPALLSRTAMQKPGLYRIP*HFLFGH Trigger: GTGTCCAAAGAGAAAATGCCATGGGATTCGATAAAG...TCCAGGCTTCTGCATGGCGGTTCTGGATAGAAGTGCAGGTCTCAGAAGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| 3UTR-3UTR TCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTCTCTGGAAAACCTCCTaGGCCACCACAGAGGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: TLCRTIFQFFILVPSVLLLWKTS*ATTEAK Trigger: TTTTGCCTCTGTGGTGGCTCAGGAGGTTTTCCAGAG...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| 3UTR-3UTR GCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTTATCCAGAACCGCCATaGAGAAGCCTGGAGTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: TLCRTIFQFFILVPSVLLYPEPP*RSLESM Trigger: CATGGACTCCAGGCTTCTGCATGGCGGTTCTGGATA...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR CAA 90 bp | TACAGAGCAACAAATCTTCCTTGGGCACCGTGCTTCTTGAAGTCCTaGTACACACAAAGCTTTGTGAGCAATGGAAAAACTACCCAGACG | + |
|
Preference number: 2 (lower is better) Translates to: YRATNLPWAPCFLKS*YTQSFVSNGKTTQT Trigger: CGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCCAAGGAAGATTTGTTGCTCTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR TCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTCTAGCAGCCTTTGGATaGAGAGGTAGAACTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TLCRTIFQFFILVPSVLLLAAFG*RGRTLS Trigger: GCTGAGAGTTCTACCTCTTCATCCAAAGGCTGCTAG...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR GCA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATAAGCTCTTTGAACATATaGTCAGTAGAGTTCATTGAC | + |
|
Preference number: 2 (lower is better) Translates to: HPCPSELPQHDMLLSSPISSLNI*SVEFID Trigger: GTCAATGAACTCTACTGAGCATATGTTCAAAGAGCT...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTGACTTGCCTTGGTCATaGTGTCTGTTCACAGCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: TLCRTIFQFFILVPSVLLDLPWS*CLFTAV Trigger: TACTGCTGTGAACAGACACCATGACCAAGGCAAGTC...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR CCA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATAGTATTAGAGTCAGAATaGTTTTCTTTGTGCTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: HPCPSELPQHDMLLSSPIVLESE*FSLCCS Trigger: TGAACAGCACAAAGAAAACCATTCTGACTCTAATAC...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR CCA 90 bp | CTGGAAACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGTTGCCAAGAGACCACTaGGAAAGTGTTGATCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LETLCRTIFQFFILVPSVLPRDH*ESVDPL Trigger: CAAAGGATCAACACTTTCCCAGTGGTCTCTTGGCAA...CACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGTTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR CCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTTCTTGGACCAGGGAGTaGCACCATTTGGAAGTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EMVCICKQTCLKNSVLFSSWTRE*HHLEVW Trigger: CCACACTTCCAAATGGTGCCACTCCCTGGTCCAAGA...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTGGGAAAAGCAGACACTaGATGCTACTCAGGAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: EMVCICKQTCLKNSVLFSGKSRH*MLLRSQ Trigger: CTGACTCCTGAGTAGCATTCAGTGTCTGCTTTTCCC...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 90 bp | ATCCTTTGTGGGTTCGAACATAGAAAGACATATGGCTTGGTCCTGTaGCTTCAAAGGTCAACTTTATCGAATCCCATGGCATTTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: ILCGFEHRKTYGLVL*LQRSTLSNPMAFSL Trigger: AAGAGAAAATGCCATGGGATTCGATAAAGTTGACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTCTATGTTCGAACCCACAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTTTTGGTAGGACCTACTaGTCCCACTTGGTCAGGATA | + |
|
Preference number: 2 (lower is better) Translates to: EMVCICKQTCLKNSVLFSFGRTY*SHLVRI Trigger: TATCCTGACCAAGTGGGATCAGTAGGTCCTACCAAA...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAATCAAACCCATTGATCCATATTCCAGAGTCTCTTTTTACTACGCTTCCTTCAAAAGGGTGTTTAGCTaGCGAAACGTAAGCCTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: IIKPIDPYSRVSFYYASFKRVFS*RNVSLD Trigger: GTCCAGGCTTACGTTTCGGCAGCTAAACACCCTTTT...GAAGGAAGCGTAGTAAAAAGAGACTCTGGAATATGGATCAATGGGTTTGATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR GCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTGGCAATATCCACATGTaGTTAGTTGTCAGAAAACAG | + |
|
Preference number: 2 (lower is better) Translates to: TLCRTIFQFFILVPSVLLGNIHM*LVVRKQ Trigger: CTGTTTTCTGACAACTAAGCACATGTGGATATTGCC...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTCCAGATACAGGTCGCTaGCATTCATATAATAAAATC | + |
|
Preference number: 2 (lower is better) Translates to: SYLSLVCCFCLYSSGGCIPDTGR*HSYNKI Trigger: GATTTTATTATATGAATGCCAGCGACCTGTATCTGG...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR CCA 90 bp | AAGAGTATGAATGAATATGATTTTGGCGACTGTTGCAGTTCCATACAGGCAAACCCGCTGTGTCATACTTaGTGTGATAGATGTATCCAT | + |
|
Preference number: 2 (lower is better) Translates to: KSMNEYDFGDCCSSIQANPLCHT*CDRCIH Trigger: ATGGATACATCTATCACACCAAGTATGACACAGCGG...GTTTGCCTGTATGGAACTGCAACAGTCGCCAAAATCATATTCATTCATACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR TCA 90 bp | ATAATCAAACCCATTGATCCATATTCCAGAGTCTCTTTTTACTACGCTTCCTTCAAAGTAGTTATACCATaGGAGAGACTGTCCAATGAG | + |
|
Preference number: 2 (lower is better) Translates to: IIKPIDPYSRVSFYYASFKVVIP*ERLSNE Trigger: CTCATTGGACAGTCTCTCTCATGGTATAACTACTTT...GAAGGAAGCGTAGTAAAAAGAGACTCTGGAATATGGATCAATGGGTTTGATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR-3UTR GCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTTCTCTGAAATTCAGATaGACAGTTTCATTCCAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: EMVCICKQTCLKNSVLFSSLKFR*TVSFQG Trigger: TCCCTGGAATGAAACTGTGCATCTGAATTTCAGAGA...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 90 bp | TATCCCAAAAGCTCTTTGAACATATGCTCAGTAGAGTTCATTGACTaGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCAT | + |
|
Preference number: 2 (lower is better) Translates to: YPKSSLNICSVEFID*YYKHPCIMGEKLSH Trigger: ATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAATGAACTCTACTGAGCATATGTTCAAAGAGCTTTTGGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTAAACAGAAAACCCAATaGAGCAATAAAGAACTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: EMVCICKQTCLKNSVLFSKQKTQ*SNKELV Trigger: CACAAGTTCTTTATTGCTGCATTGGGTTTTCTGTTT...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGGTGACTGGGATGCCGTaGCCAAGAGACCACTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LTRTTRAISRGSSSAVHTVTGMP*PRDHWE Trigger: TTCCCAGTGGTCTCTTGGCAACGGCATCCCAGTCAC...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR CCA 72 bp | GCTACGGGCTTTGTCAGGGGTCAGCCTTCCTGTGGGTaGCGAGAAGTCCCTGTATGTCTGCAGTGTAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ATGFVRGQPSCG*REVPVCLQCSF Trigger: GAAGCTACACTGCAGACATACAGGGACTTCTCGCCACCCACAGGAAGGCTGACCCCTGACAAAGCCCGTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | GTCACTGTGGGTGTGGGCTTAGACTCTCCCTCCAGTTaGCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTVGVGLDSPSS*LEVSLPLAAFG Trigger: TCCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAACTGGAGGGAGAGTCTAAGCCCACACCCACAGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | GAAGTGCACTGGAAGATACCAAGGGAAGCCACAGAGTaGGGCATCCTCCTCACAGTGAGCTCGGATTGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: EVHWKIPREATE*GILLTVSSDCV Trigger: GACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTGGCTTCCCTTGGTATCTTCCAGTGCACTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR TCA 72 bp | GTGTCAGAGGGAATGATCCCACTCTGGAAAACCTCCTaGGCCACCACAGAGGCAAAAGGGTGTTTAGCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: VSEGMIPLWKTS*ATTEAKGCLAA Trigger: GGCAGCTAAACACCCTTTTGCCTCTGTGGTGGCTCAGGAGGTTTTCCAGAGTGGGATCATTCCCTCTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR GCA 72 bp | AGCCTTCCTGTGGGTGGCGAGAAGTCCCTGTATGTCTaGAGTGTAGCTTCTCTGCCTGCTCTTATACCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLPVGGEKSLYV*SVASLPALIPS Trigger: GCTAGGTATAAGAGCAGGCAGAGAAGCTACACTGCAGACATACAGGGACTTCTCGCCACCCACAGGAAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | GTAGGTGGAAACCCACGCCGAAGGAAAGGACCAGTCTaGGAACTTCTTCTTCAGAGCATCCAGCTGAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VGGNPRRRKGPV*ELLLQSIQLRG Trigger: TCCTCTCAGCTGGATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGTTTCCACCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR CCA 72 bp | GGTAGAACTCTCAGCTCTGCCTGCGCCATGACAGCCTaGATGTTGCCATGCTCCCACATTGATGATAATGGA | + |
|
Preference number: 3 (lower is better) Translates to: GRTLSSACAMTA*MLPCSHIDDNG Trigger: TCCATTATCATCAATGTGGGAGCATGGCAACATCCAGGCTGTCATGGCGCAGGCAGAGCTGAGAGTTCTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | ACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTaGAATAGGTGTGACCTGGTTGGAGTAGGTGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: TREWHHLEVWPC*NRCDLVGVGVS Trigger: TGACACACCTACTCCAACCAGGTCACACCTATTCCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCTCCGGCTGTTGTAGGACTCCTGTGGTGCCGTCTGAATTTCGGATGAACATGACAGGAATGTGTTaGAGGGAAAAGCAGACACTG | + |
|
Preference number: 3 (lower is better) Translates to: GCSGCCRTPVVPSEFRMNMTGMC*REKQTL Trigger: CAGTGTCTGCTTTTCCCTCAAACACATTCCTGTCAT...GTTCATCCGAAATTCAGACGGCACCACAGGAGTCCTACAACAGCCGGAGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR TCA 72 bp | GGGCATCCTCCTCACAGTGAGCTCGGATTGTGTCGTTaGTCTCAGGAATGTGAGGTGTTACGTGAGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: GHPPHSELGLCR*SQECEVLRETF Trigger: GAATGTCTCACGTAACACCTCACATTCCTGAGATCAACGACACAATCCGAGCTCACTGTGAGGAGGATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR GCA 72 bp | CCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTaGACACGTAACAGTGCTCTTGTTGACATTCAGACA | + |
|
Preference number: 3 (lower is better) Translates to: PHEQFPEAPLLR*TRNSALVDIQT Trigger: TGTCTGAATGTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | ACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTaGGGTGCACACGTAACAGTGCTCTTGTTGACATTC | + |
|
Preference number: 3 (lower is better) Translates to: TYHTSNFQRLLF*GAHVTVLLLTF Trigger: GAATGTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | GCTCTGCACTTCAGATCTGGATGTTTTGTCCTTTCTTaGCAGGTTGTCCTGCCTGGAGCCACCAGAATGATG | + |
|
Preference number: 3 (lower is better) Translates to: ALHFRSGCFVLS*QVVLPGATRMM Trigger: CATCATTCTGGTGGCTCCAGGCAGGACAACCTGGCAAGAAAGGACAAAACATCCAGATCTGAAGTGCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | TCCATCCGCGAGATTAAAACACAAAGAGACTGTAGGTaGAAACCCACGCCGAAGGAAAGGACCAGTCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SIREIKTQRDCR*KPTPKERTSLG Trigger: TCCCAGACTGGTCCTTTCCTTCGGCGTGGGTTTCCACCTACAGTCTCTTTGTGTTTTAATCTCGCGGATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATAATGACAGCCTGGATGTaGCCATGCTCCCACATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: HPCPSELPQHDMLLSSPIMTAWM*PCSHID Trigger: ATCAATGTGGGAGCATGGCAACATCCAGGCTGTCAT...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR TCA 72 bp | GGGAATAAAACACAAAGTAGTCTCCTCCTCTGCTTGTaGCTGGGATGCCGTTGCCAAGAGACCACTGGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GNKTQSSLLLCL*LGCRCQETTGK Trigger: TTTCCCAGTGGTCTCTTGGCAACGGCATCCCAGTCACAAGCAGAGGAGGAGACTACTTTGTGTTTTATTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR GCA 72 bp | TGGAGGTTCAAGTACTGTCTATATTTATCTCAAGGCTaGTCCGGCTGTTGTAGGACTCCTGTGGTGCCGTCT | + |
|
Preference number: 3 (lower is better) Translates to: WRFKYCLYLSQG*SGCCRTPVVPS Trigger: AGACGGCACCACAGGAGTCCTACAACAGCCGGAGCAGCCTTGAGATAAATATAGACAGTACTTGAACCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | GAAATGAGCAGGGTTTCTTGGAGAGACCTCGGGAGCTaGAAGATACCAGTTTTTCCTGATCAGGAAGTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EMSRVSWRDLGS*KIPVFPDQEVH Trigger: GTGCACTTCCTGATCAGGAAAAACTGGTATCTTCCAGCTCCCGAGGTCTCTCCAAGAAACCCTGCTCATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGCTCCGGCTGTTGTAGGACTCCTGTGGTGCCGTCTGAATTTCGGATGAACCACTTGGTCAGGATATaGGATTACAGAAATTCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GCSGCCRTPVVPSEFRMNHLVRI*DYRNSH Trigger: ATGAGAATTTCTGTAATCCAATATCCTGACCAAGTG...GTTCATCCGAAATTCAGACGGCACCACAGGAGTCCTACAACAGCCGGAGCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTTCCTTTCTTGCCAGGTaGTCCTGCCTGGAGCCACCA | + |
|
Preference number: 3 (lower is better) Translates to: TLCRTIFQFFILVPSVLLSFLAR*SCLEPP Trigger: TGGTGGCTCCAGGCAGGACAACCTGGCAAGAAAGGA...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR TCA 72 bp | TCGAATCCCATGGCATTTTCTCTTTGGACACAAGTCTaGAATGAGCAGGGTTTCTTGGAGAGACCTCGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SNPMAFSLWTQV*NEQGFLERPRE Trigger: CTCCCGAGGTCTCTCCAAGAAACCCTGCTCATTTCAGACTTGTGTCCAAAGAGAAAATGCCATGGGATTCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR CCA 72 bp | ATCTTTTGTTCTCCCCTGATAGATAGTGGGCAGCAATaGCCACAGTCACCATTCCTTCTGCCTGTTCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: IFCSPLIDSGQQ*PQSPFLLPVLL Trigger: CAGAAGAACAGGCAGAAGGAATGGTGACTGTGGCCATTGCTGCCCACTATCTATCAGGGGAGAACAAAAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGAATAGGTGTGACTATCCCAAAAGCTCTTaGAACATATGCTCAGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WTREWHHLEVWPCWNRCDYPKSS*NICSVE Trigger: CTCTACTGAGCATATGTTCAAAGAGCTTTTGGGATA...GTCACACCTATTCCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR-3UTR CAA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTAGCAACAAATCTTCCTaGGGCACCGTGCTTCTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SYLSLVCCFCLYSSGGCISNKSS*GTVLLE Trigger: TTCAAGAAGCACGGTGCCCAAGGAAGATTTGTTGCT...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR TCA 72 bp | ATTAGGCAGGCAATACAAGGAACACGATTAAGAAACTaGCACGTACCACACGAGCAATTTCCAGAGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: IRQAIQGTRLRN*HVPHEQFPEAP Trigger: AGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAGTTTCTTAATCGTGTTCCTTGTATTGCCTGCCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCTAATGAATGTGATCCCGAGTCCACACAAGAAGTCTCTCATGTAATTAGCATTTTCAGGGCCTGTTaGGAACACAAGTTCTTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: PANECDPESTQEVSHVISIFRAC*EHKFFP Trigger: GGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAAT...GCTAATTACATGAGAGACTTCTTGTGTGGACTCGGGATCACATTCATTAGCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR GCA 72 bp | CACTATAAATGTGCAGTCTTCCTTCTGGGTGATTCTTaGTTCATAGGAAGCTGTGGAGGTTCAAGTACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: HYKCAVFLLGDS*FIGSCGGSSTV Trigger: GACAGTACTTGAACCTCCACAGCTTCCTATGAAGCAAGAATCACCCAGAAGGAAGACTGCACATTTATAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | CTTGAAGTCCTTGTACACACAAAGCTTTGTGAGCAATaGAAAAACTACCCAGACGGCACTCATGAATGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LEVLVHTKLCEQ*KNYPDGTHECR Trigger: TCTGCATTCATGAGTGCCGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR CCA 72 bp | AAACACAGCCCAGATGAGGTAGAGCCCGTAAAGATATaGGATAAACATCCCCAAAAGGTACAGAGCAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: KHSPDEVEPVKI*DKHPQKVQSNK Trigger: TTTGTTGCTCTGTACCTTTTGGGGATGTTTATCCCATATCTTTACGGGCTCTACCTCATCTGGGCTGTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR CCA 72 bp | TCTACTCACGTGCTGAAGAAACACTCTCTTTGGCTTTaGACTCTCGGGATTAGAACTATATGGGAAAAAGGC | + |
|
Preference number: 3 (lower is better) Translates to: STHVLKKHSLWL*TLGIRTIWEKG Trigger: GCCTTTTTCCCATATAGTTCTAATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR TCA 72 bp | CTAAAATGTTGTCACCTGCTCTCTGAATGGAATCTATaGGAATCCTGTCCGCTGTGTCATACTTGGTGTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LKCCHLLSEWNL*ESCPLCHTWCD Trigger: ATCACACCAAGTATGACACAGCGGACAGGATTCTCATAGATTCCATTCAGAGAGCAGGTGACAACATTTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR TCA 72 bp | CGGGCACAGAACATAAGCCCGTATTTTGAAATTCATTaGGCTATCAGTACTGTTACTCAGCTGTGGTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RAQNISPYFEIH*AISTVTQLWFS Trigger: AGAGAACCACAGCTGAGTAACAGTACTGATAGCTCAATGAATTTCAAAATACGGGCTTATGTTCTGTGCCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR TCA 72 bp | CAGATTAACCCGGGCACAGAACATAAGCCCGTATTTTaGAATTCATTGAGCTATCAGTACTGTTACTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QINPGTEHKPVF*NSLSYQYCYSA Trigger: AGCTGAGTAACAGTACTGATAGCTCAATGAATTTCAAAATACGGGCTTATGTTCTGTGCCCGGGTTAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | TTAGTCATGAGTGACATGATTGGCAATATCCACATGTaGTTAGTTGTCAGAAAACAGGAAGTTTCAACCGGC | + |
|
Preference number: 3 (lower is better) Translates to: LVMSDMIGNIHM*LVVRKQEVSTG Trigger: GCCGGTTGAAACTTCCTGTTTTCTGACAACTAAGCACATGTGGATATTGCCAATCATGTCACTCATGACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | CAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTaGTTCTGTTTATACTCTTCTGGGGGATGCATTACT | + |
|
Preference number: 3 (lower is better) Translates to: QSFSSSYLSLVC*FCLYSSGGCIT Trigger: AGTAATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | GAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTaGTGCTTCTGTTTATACTCTTCTGGGGGATGCATT | + |
|
Preference number: 3 (lower is better) Translates to: EQSFSSSYLSLV*CFCLYSSGGCI Trigger: AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| 3UTR GCA 72 bp | TCGGATGAACTTTTCAGTGGCTCTGTAGAGATGGTCTaGATATGTAAGCAAACCTGTTTGAAGAATTCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SDELFSGSVEMV*ICKQTCLKNSV Trigger: GACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTCTACAGAGCCACTGAAAAGTTCATCCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | AAAAGTTCTACTCACGTGCTGAAGAAACACTCTCTTTaGCTTTGGACTCTCGGGATTAGAACTATATGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KSSTHVLKKHSL*LWTLGIRTIWE Trigger: TTCCCATATAGTTCTAATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR TCA 72 bp | GTGTTACGTGAGACATTCCAGTATAATCAAACCCATTaGTCCATATTCCAGAGTCTCTTTTTACTACGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VLRETFQYNQTH*SIFQSLFLLRF Trigger: GAAGCGTAGTAAAAAGAGACTCTGGAATATGGATCAATGGGTTTGATTATACTGGAATGTCTCACGTAACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| 3UTR CCA 72 bp | CCAAATGATGTTTTGGTAGGACCTACTGATCCCACTTaGTCAGGATATTGGATTACAGAAATTCTCATTAAA | + |
|
Preference number: 3 (lower is better) Translates to: PNDVLVGPTDPT*SGYWITEILIK Trigger: TTTAATGAGAATTTCTGTAATCCAATATCCTGACCAAGTGGGATCAGTAGGTCCTACCAAAACATCATTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CCA 72 bp | TTGGTAGGACCTACTGATCCCACTTGGTCAGGATATTaGATTACAGAAATTCTCATTAAATTTTGCAATCAA | + |
|
Preference number: 3 (lower is better) Translates to: LVGPTDPTWSGY*ITEILIKFCNQ Trigger: TTGATTGCAAAATTTAATGAGAATTTCTGTAATCCAATATCCTGACCAAGTGGGATCAGTAGGTCCTACCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | TGCCGAAACGTAAGCCTGGACCAACCAAGGATTTTCAGGGCCTGTTTGGAACACCGCTGCAGCGAGAGCTaGACGAGCGCCCGCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CRNVSLDQPRIFRACLEHRCSES*TSARSA Trigger: CGCGCTGCGGGCGCTCGTGCAGCTCTCGCTGCAGCG...GTGTTCCAAACAGGCCCTGAAAATCCTTGGTTGGTCCAGGCTTACGTTTCGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| CDS-3UTR TCA 90 bp | TACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCGCATCCTCCTGCGCTaGGGCCTCTCTCTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YHTSNFQRLLFCGAHVTVRILLR*GLSLPV Trigger: CACCGGCAGAGAGAGGCCTCAGCGCAGGAGGATGCG...CACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | TGCTACTCAGGAGTCAGGCCTCTGCATCAGGGCTTAGGCTTCCAAACAGACAAACTCAGCACCAGCCGCTaGAGCGAGAGCTGCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CYSGVRPLHQGLGFQTDKLSTSR*SESCTS Trigger: GCTCGTGCAGCTCTCGCTGCAGCGGCTGGTGCTGAG...TTTGTCTGTTTGGAAGCCTAAGCCCTGATGCAGAGGCCTGACTCCTGAGTAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | ACCCACGCCGAAGGAAAGGACCAGTCTGGGAACTTCTTCTTCAGAGCATCCAGCAGGAACACCACAGCGTaGTGCATGGGCTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: THAEGKDQSGNFFFRASSRNTTA*CMGSGD Trigger: GTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCT...GCTGGATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTCGCTGCAGCGAGAGCTaGACGAGCGCCCGCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: TLCRTIFQFFILVPSVLLRCSES*TSARSA Trigger: CGCGCTGCGGGCGCTCGTGCAGCTCTCGCTGCAGCG...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTATCCAGAACCGCCATaGAGAAGCCTGGAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTTRAISRGSSSAVHTYPEPP*RSLESM Trigger: CATGGACTCCAGGCTTCTGCATGGCGGTTCTGGATA...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | ACCCTAACTAAGACACCAGGGAAAATGCTACGGGCTTaGTCAGGGGTCAGCCTTCCTGTGGGTGGCGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLTKTPGKMLRA*SGVSLPVGGEK Trigger: CTTCTCGCCACCCACAGGAAGGCTGACCCCTGACAAAGCCCGTAGCATTTTCCCTGGTGTCTTAGTTAGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | TGTCACTGTGGGTGTGGGCTTAGACTCTCCCTCCAGTaGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CHCGCGLRLSLQ*PGSQSSTSSLW Trigger: CCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAACTGGAGGGAGAGTCTAAGCCCACACCCACAGTGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | ACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTGACAAGGATCTCTGGAAAACCTCCTaGGCCACCACAGAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVLRATLRGAFLFSPDKDLWKTS*ATTEAK Trigger: TTTTGCCTCTGTGGTGGCTCAGGAGGTTTTCCAGAG...ATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTCACAGACAGCCAGGATaGAGGCCAGCACAACGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFHRQPG*RPAQRR Trigger: CCGACGTTGTGCTGGCCTCCATCCTGGCTGTCTGTG...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGGATCAGGAAGTGCACTaGAAGATACCAAGGGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTRTTRAISRGSSSAVHTDQEVH*KIPREA Trigger: GGCTTCCCTTGGTATCTTCCAGTGCACTTCCTGATC...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | AGACCTGCACTTCTATCCAGAACCGCCATGCAGAAGCCTGGAGTCCATGGGAATCTCTGGAAAACCTCCTaGGCCACCACAGAGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPALLSRTAMQKPGVHGNLWKTS*ATTEAK Trigger: TTTTGCCTCTGTGGTGGCTCAGGAGGTTTTCCAGAG...ATTCCCATGGACTCCAGGCTTCTGCATGGCGGTTCTGGATAGAAGTGCAGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR TCA 90 bp | ACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTGACAAGGATGGGCACCGTGCTTCTTaGAGTCCTTGTACACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVLRATLRGAFLFSPDKDGHRAS*SPCTHK Trigger: TTTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCC...ATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGGACACAAGTCTGAAATaGGCAGGGTTTCTTGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTTRAISRGSSSAVHTDTSLK*AGFLGE Trigger: CTCTCCAAGAAACCCTGCTCATTTCAGACTTGTGTC...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTCTCAGCACCAGCCGCTaGAGCGAGAGCTGCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SYLSLVCCFCLYSSGGCILSTSR*SESCTS Trigger: GCTCGTGCAGCTCTCGCTGCAGCGGCTGGTGCTGAG...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGTTCTCACTGAAGACCTTTACCAGATAGAATCTGGGCTGCGTTTGACGAGGGAAGCCACAGAGTaGGGCATCCTCCTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWVLTEDLYQIESGLRLTREATE*GILLTV Trigger: CACTGTGAGGAGGATGCCCCACTCTGTGGCTTCCCT...CGTCAAACGCAGCCCAGATTCTATCTGGTAAAGGTCTTCAGTGAGAACCCAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | ACTCTCAGCTCTGCCTGCGCCATGACAGCCTGGATGTaGCCATGCTCCCACATTGATGATAATGGACTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSACAMTAWM*PCSHIDDNGLN Trigger: GTTCAGTCCATTATCATCAATGTGGGAGCATGGCAACATCCAGGCTGTCATGGCGCAGGCAGAGCTGAGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | GGCTGCTCCGGCTGTTGTAGGACTCCTGTGGTGCCGTCTGAATTTCGGATGAACGTGCTTCTATCAGCTTaGTCTGCTCCAAAAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GCSGCCRTPVVPSEFRMNVLLSA*SAPKGT Trigger: AGTACCTTTTGGAGCAGATCAAGCTGATAGAAGCAC...GTTCATCCGAAATTCAGACGGCACCACAGGAGTCCTACAACAGCCGGAGCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTCTGAATGGAATCTATaGGAATCCTGTCCGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTRTTRAISRGSSSAVHTSEWNL*ESCPLC Trigger: ACACAGCGGACAGGATTCTCATAGATTCCATTCAGA...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGAAACCATGGCTTGCTTaGAAGACATTTTCCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LTRTTRAISRGSSSAVHTKPWLA*KTFSSA Trigger: CGCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTT...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCCACAGAGTGGGGCATCCTCCTCACAGTGAGCTCGGATTGTGTCGTTGATTCTGAATGGAATCTATaGGAATCCTGTCCGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EATEWGILLTVSSDCVVDSEWNL*ESCPLC Trigger: ACACAGCGGACAGGATTCTCATAGATTCCATTCAGA...ATCAACGACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | ACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTGACAAGGATTGCTGTGAAGGCTGTTaGTTTGTGCTTCTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVLRATLRGAFLFSPDKDCCEGC*FVLLSA Trigger: AGCTGATAGAAGCACAAAGCAACAGCCTTCACAGCA...ATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCCACAGAGTGGGGCATCCTCCTCACAGTGAGCTCGGATTGTGTCGTTGATGACGGCACTCATGAATaGAGAGCAAAACCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: EATEWGILLTVSSDCVVDDGTHE*RAKPLI Trigger: TATCAAGGGTTTTGCTCTGCATTCATGAGTGCCGTC...ATCAACGACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTGGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAACCTAGAGACGCCACAAGAGCCACTGCCGTGACATACCTCACAAGCTACTTCCTGATCAGGAAGTaGACTGGAAGATACCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MEPRDATRATAVTYLTSYFLIRK*TGRYQG Trigger: CCCTTGGTATCTTCCAGTGCACTTCCTGATCAGGAA...GTAGCTTGTGAGGTATGTCACGGCAGTGGCTCTTGTGGCGTCTCTAGGTTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGGAAGTGCACTGGAAGATACCAAGGGAAGCCACAGAGTGGGGCATCCTCCAAGCTTTGTGAGCAATaGAAAAACTACCCAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: IRKCTGRYQGKPQSGASSKLCEQ*KNYPDG Trigger: GCCGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTT...GGAGGATGCCCCACTCTGTGGCTTCCCTTGGTATCTTCCAGTGCACTTCCTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | TGCTACTCAGGAGTCAGGCCTCTGCATCAGGGCTTAGGCTTCCAAACAGACAAAAACTTCGAGCATCACTaGACAGCTAACTGCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CYSGVRPLHQGLGFQTDKNFEHH*TANCIV Trigger: GACGATGCAGTTAGCTGTGCAGTGATGCTCGAAGTT...TTTGTCTGTTTGGAAGCCTAAGCCCTGATGCAGAGGCCTGACTCCTGAGTAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCTTCTGAGACCTGCACTTCTATCCAGAACCGCCATGCAGAAGCCTGGAAAACCATGGCTTGCTTaGAAGACATTTTCCTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLRPALLSRTAMQKPGKPWLA*KTFSSA Trigger: CGCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTT...TCCAGGCTTCTGCATGGCGGTTCTGGATAGAAGTGCAGGTCTCAGAAGAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAACCTAGAGACGCCACAAGAGCCACTGCCGTGACATACCTCACAAGCTACGACGGCACTCATGAATaGAGAGCAAAACCCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: MEPRDATRATAVTYLTSYDGTHE*RAKPLI Trigger: TATCAAGGGTTTTGCTCTGCATTCATGAGTGCCGTC...GTAGCTTGTGAGGTATGTCACGGCAGTGGCTCTTGTGGCGTCTCTAGGTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CGCACAGAGAGGCATCTTACCCACCTCCACTGGCAAGTGGACTTGCCTATTTCAAAGCTTTGTGAGCAATaGAAAAACTACCCAGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTERHLTHLHWQVDLPISKLCEQ*KNYPDG Trigger: GCCGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTT...TGAAATAGGCAAGTCCACTTGCCAGTGGAGGTGGGTAAGATGCCTCTCTGTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGTCCTCTGCTTGTGACTaGGATGCCGTTGCCAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FVYSWTREWHHLEVWPCWSSACD*DAVAKR Trigger: TCTCTTGGCAACGGCATCCCAGTCACAAGCAGAGGA...CCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCAAGAATATACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | AGCTCTGCACTTCAGATCTGGATGTTTTGTCCTTTCTaGCCAGGTTGTCCTGCCTGGAGCCACCAGAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSALQIWMFCPF*PGCPAWSHQND Trigger: ATCATTCTGGTGGCTCCAGGCAGGACAACCTGGCAAGAAAGGACAAAACATCCAGATCTGAAGTGCAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTCTGGCCCAGGGATGTTaGGTAATAAAACCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFLAQGC*VIKPWL Trigger: AAGCCATGGTTTTATTACTCAACATCCCTGGGCCAG...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCTCTTGTTGATACCAGTTTTTCCTaGTCAGGAAGTGCACTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQFPEAPLLRCTRNSALVDTSFS*SGSALE Trigger: TTCCAGTGCACTTCCTGATCAGGAAAAACTGGTATC...AACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTCCTCCTCTGCTTGTaGCTGGGATGCCGTTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LETLCRTIFQFFILVPSVLLLCL*LGCRCQ Trigger: TTGGCAACGGCATCCCAGTCACAAGCAGAGGAGGAG...CACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGTTTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCTTCTGAGACCTGCACTTCTATCCAGAACCGCCATGCAGAAGCCTGGAGAGAGAGATGAACACTaGTATAATGAGGACGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLLRPALLSRTAMQKPGERDEH*YNEDGN Trigger: GTTACCGTCCTCATTATAGCAGTGTTCATCTCTCTC...TCCAGGCTTCTGCATGGCGGTTCTGGATAGAAGTGCAGGTCTCAGAAGAACAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR CCA 90 bp | TCATCTCATCCTCTGTCACTGATGGAACCTAGAGACGCCACAAGAGCCACTGCCCCGCTGTGTCATACTTaGTGTGATAGATGTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSHPLSLMEPRDATRATAPLCHT*CDRCIH Trigger: ATGGATACATCTATCACACCAAGTATGACACAGCGG...GGCAGTGGCTCTTGTGGCGTCTCTAGGTTCCATCAGTGACAGAGGATGAGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | TGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGAATAGGTGTGACGAAAGACATATGGCTTaGTCCTGTTGCTTCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WTREWHHLEVWPCWNRCDERHMA*SCCFKG Trigger: ACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTC...GTCACACCTATTCCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTGTGCTTCTATCAGCTTaGTCTGCTCCAAAAGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFVLLSA*SAPKGT Trigger: AGTACCTTTTGGAGCAGATCAAGCTGATAGAAGCAC...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCTTCTGAGACCTGCACTTCTATCCAGAACCGCCATGCAGAAGCCTGGAAAAGTAGTTATACCATaGGAGAGACTGTCCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVLLRPALLSRTAMQKPGKVVIP*ERLSNE Trigger: CTCATTGGACAGTCTCTCTCATGGTATAACTACTTT...TCCAGGCTTCTGCATGGCGGTTCTGGATAGAAGTGCAGGTCTCAGAAGAACAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | CAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCTCTTGTTGACGTATATCTACGGAGATaGTGTGAAGGCTGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QFPEAPLLRCTRNSALVDVYLRR*CEGCCF Trigger: AAAGCAACAGCCTTCACAGCATCTCCGTAGATATAC...GTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTGTATATCTACGGAGATaGTGTGAAGGCTGTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSTSAAMLAIQCSGEEVVYLRR*CEGCCF Trigger: AAAGCAACAGCCTTCACAGCATCTCCGTAGATATAC...AACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | GATTGTGTCGTTGATCTCAGGAATGTGAGGTGTTACGTGAGACATTCCAGTATACACTGCACAGCTAACTaGATCGTCACTGGCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DCVVDLRNVRCYVRHSSIHCTAN*IVTGTW Trigger: CCAGGTGCCAGTGACGATGCAGTTAGCTGTGCAGTG...TATACTGGAATGTCTCACGTAACACCTCACATTCCTGAGATCAACGACACAATC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGCTATCAGTACTGTTACTCAGCTGTGGTTCTCTACAAGCTAGACATAAACAGGAACACCACAGCGTaGTGCATGGGCTCTGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSYQYCYSAVVLYKLDINRNTTA*CMGSGD Trigger: GTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCT...GTTTATGTCTAGCTTGTAGAGAACCACAGCTGAGTAACAGTACTGATAGCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTCAGAGAGCATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCAAAAGGGTGTTTAGCTaGCGAAACGTAAGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVREHPCPSELPQHDMLLKRVFS*RNVSLD Trigger: GTCCAGGCTTACGTTTCGGCAGCTAAACACCCTTTT...GAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATGCTCTCTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | TTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGTGTTCTTCTGAGACCTaGACTTCTATCCAGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: FVYSWTREWHHLEVWPCWCSSET*TSIQNR Trigger: GCGGTTCTGGATAGAAGTGCAGGTCTCAGAAGAACA...CCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCAAGAATATACAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAACCCACGCCGAAGGAAAGGACCAGTCTGGGAACTTCTTCTTCAGAGCATTTTTCAGGGCCTGTTTaGAACACAAGTTCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKPTPKERTSLGTSSSEHFSGPV*NTSSFP Trigger: AGGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAA...ATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGTTTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR TCA 90 bp | TCTACTCACGTGCTGAAGAAACACTCTCTTTGGCTTTGGACTCTCGGGATTAGACTGGCCCAGGGATGTTaGGTAATAAAACCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STHVLKKHSLWLWTLGIRLAQGC*VIKPWL Trigger: AAGCCATGGTTTTATTACTCAACATCCCTGGGCCAG...TCTAATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| CDS-3UTR TCA 90 bp | GGAATAAAACACAAAGTAGTCTCCTCCTCTGCTTGTGACTGGGATGCCGTTGCCTTGTCACCTGCTCTCTaGATGGAATCTATGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GIKHKVVSSSACDWDAVALSPAL*MESMRI Trigger: GATTCTCATAGATTCCATTCAGAGAGCAGGTGACAA...GGCAACGGCATCCCAGTCACAAGCAGAGGAGGAGACTACTTTGTGTTTTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTCTCCAGGTTAATAAATaGTCGAATCAAACTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFLQVNK*SNQTGP Trigger: TGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAG...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTGAGCCCGTAAAGATATaGGATAAACATCCCCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFEPVKI*DKHPQK Trigger: CTTTTGGGGATGTTTATCCCATATCTTTACGGGCTC...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTAAGAAACACTCTCTTTaGCTTTGGACTCTCGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFKKHSL*LWTLGI Trigger: AATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTT...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | TTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGTTGCCAAGAGACCACTaGGAAAGTGTTGATCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: FVYSWTREWHHLEVWPCWLPRDH*ESVDPL Trigger: CAAAGGATCAACACTTTCCCAGTGGTCTCTTGGCAA...CCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCAAGAATATACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTGATAGTGGGCAGCAATaGCCACAGTCACCATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SYLSLVCCFCLYSSGGCIDSGQQ*PQSPFL Trigger: AAGGAATGGTGACTGTGGCCATTGCTGCCCACTATC...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | CTGGGATGCCGTTGCCAAGAGACCACTGGGAAAGTGTaGATCCTTTGTGGGTTCGAACATAGAAAGACATAT | + |
|
Preference number: 4 (lower is better) Translates to: LGCRCQETTGKV*ILCGFEHRKTY Trigger: ATATGTCTTTCTATGTTCGAACCCACAAAGGATCAACACTTTCCCAGTGGTCTCTTGGCAACGGCATCCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
||
| CDS-3UTR TCA 90 bp | CCAGCTAATGAATGTGATCCCGAGTCCACACAAGAAGTCTCTCATGTAATTAGCCTGGCCCAGGGATGTTaGGTAATAAAACCATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PANECDPESTQEVSHVISLAQGC*VIKPWL Trigger: AAGCCATGGTTTTATTACTCAACATCCCTGGGCCAG...GCTAATTACATGAGAGACTTCTTGTGTGGACTCGGGATCACATTCATTAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| CDS-3UTR TCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTAAAGTAGTTATACCATaGGAGAGACTGTCCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFKVVIP*ERLSNE Trigger: CTCATTGGACAGTCTCTCTCATGGTATAACTACTTT...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | GAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCTCTTGTTTATAATCAAACCCATTaGTCCATATTCCAGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EQFPEAPLLRCTRNSALVYNQTH*SIFQSL Trigger: GAGACTCTGGAATATGGATCAATGGGTTTGATTATA...AACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCCACTGGGAAAGTGTTaGTCCTTTGTGGGTTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LETLCRTIFQFFILVPSVPLGKC*SFVGSN Trigger: GTTCGAACCCACAAAGGATCAACACTTTCCCAGTGG...CACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGTTTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CCAGCTGAGAGGATCTTTTGTTCTCCCCTGATAGATAGTGGGCAGCAATGGCCAAATAAAACCATGGCTTaGTTGCAAGACATTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAERIFCSPLIDSGQQWPNKTMA*LQDIFL Trigger: GAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATT...TGGCCATTGCTGCCCACTATCTATCAGGGGAGAACAAAAGATCCTCTCAGCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTCAGAGAGCATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCGAGAGAGATGAACACTaGTATAATGAGGACGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: EVREHPCPSELPQHDMLLERDEH*YNEDGN Trigger: GTTACCGTCCTCATTATAGCAGTGTTCATCTCTCTC...GAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATGCTCTCTGACTTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTTGCTGTGAAGGCTGTTaGTTTGTGCTTCTATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYLSLVCCFCLYSSGGCICCEGC*FVLLSA Trigger: AGCTGATAGAAGCACAAAGCAACAGCCTTCACAGCA...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTCACTGCACAGCTAACTaGATCGTCACTGGCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMVCICKQTCLKNSVLFSHCTAN*IVTGTW Trigger: CCAGGTGCCAGTGACGATGCAGTTAGCTGTGCAGTG...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCCACCTCAGCAGCTATGCTGGCAATTCAGTGCTCTGGGGAAGAAGTTTTAATAAAACCATGGCTTaGTTGCAAGACATTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFHLSSYAGNSVLWGRSFNKTMA*LQDIFL Trigger: GAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATT...AAAACTTCTTCCCCAGAGCACTGAATTGCCAGCATAGCTGCTGAGGTGGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | GATTGTGTCGTTGATCTCAGGAATGTGAGGTGTTACGTGAGACATTCCAGTATAAAAAGGGTGTTTAGCTaGCGAAACGTAAGCCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: DCVVDLRNVRCYVRHSSIKRVFS*RNVSLD Trigger: GTCCAGGCTTACGTTTCGGCAGCTAAACACCCTTTT...TATACTGGAATGTCTCACGTAACACCTCACATTCCTGAGATCAACGACACAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| 3UTR CAA 72 bp | TACAGAGCAACAAATCTTCCTTGGGCACCGTGCTTCTaGAAGTCCTTGTACACACAAAGCTTTGTGAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRATNLPWAPCF*KSLYTQSFVSN Trigger: ATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCCAAGGAAGATTTGTTGCTCTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| CDS-3UTR TCA 90 bp | GTGGGTTCGAACATAGAAAGACATATGGCTTGGTCCTGTTGCTTCAAAGGTCAAGGTAATCGTGCTTCTTaGAGTCCTTGTACACACAAA | + |
|
Preference number: 4 (lower is better) Translates to: VGSNIERHMAWSCCFKGQGNRAS*SPCTHK Trigger: TTTGTGTGTACAAGGACTTCAAGAAGCACGATTACC...TTGACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTCTATGTTCGAACCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGTTCGAACATAGAAAGACATATGGCTTGGTCCTGTTGCTTCAAAGGTCAACCGCTGTGTCATACTTaGTGTGATAGATGTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGSNIERHMAWSCCFKGQPLCHT*CDRCIH Trigger: ATGGATACATCTATCACACCAAGTATGACACAGCGG...TTGACCTTTGAAGCAACAGGACCAAGCCATATGTCTTTCTATGTTCGAACCCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCAGAGAGCATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCCCAGATACAGGTCGCTaGCATTCATATAATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: EVREHPCPSELPQHDMLLPDTGR*HSYNKI Trigger: GATTTTATTATATGAATGCCAGCGACCTGTATCTGG...GAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATGCTCTCTGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGTTCTCACTGAAGACCTTTACCAGATAGAATCTGGGCTGCGTTTGACGGTATTAGAGTCAGAATaGTTTTCTTTGTGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWVLTEDLYQIESGLRLTVLESE*FSLCCS Trigger: TGAACAGCACAAAGAAAACCATTCTGACTCTAATAC...CGTCAAACGCAGCCCAGATTCTATCTGGTAAAGGTCTTCAGTGAGAACCCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGCTATCAGTACTGTTACTCAGCTGTGGTTCTCTACAAGCTAGACATAAACAGAGACCTCGGGAGCTaGAAGATACCAGTTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSYQYCYSAVVLYKLDINRDLGS*KIPVFP Trigger: AGGAAAAACTGGTATCTTCCAGCTCCCGAGGTCTCT...GTTTATGTCTAGCTTGTAGAGAACCACAGCTGAGTAACAGTACTGATAGCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | ACAAATCTTCCTTGGGCACCGTGCTTCTTGAAGTCCTaGTACACACAAAGCTTTGTGAGCAATGGAAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: TNLPWAPCFLKS*YTQSFVSNGKT Trigger: AGTTTTTCCATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCCAAGGAAGATTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| 3UTR CAA 72 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTaGCTCTCCTCCCCCATAATTTCTAGTAATCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HPCPSELPQHDM*LSSPIISSNQF Trigger: AAACTGATTACTAGAAATTATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCACTCGGATTGTGTCGTTaGTCTCAGGAATGTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: IDLYYKHPCIMGEKLSHALGLCR*SQECEV Trigger: CACCTCACATTCCTGAGATCAACGACACAATCCGAG...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | ACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGCTGCTTAAGGCTGTTGCTTTGTaGTTCTATCAGCTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: TLCRTIFQFFILVPSVLLKAVAL*FYQLDL Trigger: CAGATCAAGCTGATAGAAGCACAAAGCAACAGCCTT...AAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTTGTCCCTAGTGTGAATAAAACCATGGCTTaGCTGGTGAATTTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LETLCRTIFQFFILVPSVNKTMA*LVNLPL Trigger: CAGTGGCAAATTCACCAGGCAAGCCATGGTTTTATT...CACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGTTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| CDS-3UTR GCA 90 bp | TGTTACGTGAGACATTCCAGTATAATCAAACCCATTGATCCATATTCCAGAGTCAACTTCGAGCATCACTaGACAGCTAACTGCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CYVRHSSIIKPIDPYSRVNFEHH*TANCIV Trigger: GACGATGCAGTTAGCTGTGCAGTGATGCTCGAAGTT...GACTCTGGAATATGGATCAATGGGTTTGATTATACTGGAATGTCTCACGTAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | CTCAGGAATGTGAGGTGTTACGTGAGACATTCCAGTATAATCAAACCCATTGATGATTTTGGCGACTGTTaGAGTTCCATACAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRNVRCYVRHSSIIKPIDDFGDC*SSIQAN Trigger: GTTTGCCTGTATGGAACTGCAACAGTCGCCAAAATC...ATCAATGGGTTTGATTATACTGGAATGTCTCACGTAACACCTCACATTCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR TCA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCAGTTCTACTCACGTGCTaGAGAAACACTCTCTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IDLYYKHPCIMGEKLSHAVLLTC*RNTLFG Trigger: GCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAAC...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | GTTATGAAAAGTTCTACTCACGTGCTGAAGAAACACTCTCTTTGGCTTTGGACTCTCCAGGTTAATAAATaGTCGAATCAAACTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VMKSSTHVLKKHSLWLWTLQVNK*SNQTGP Trigger: TGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAG...AGTCCAAAGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTTCATAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTGATTTTGGCGACTGTTaGAGTTCCATACAGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: EMVCICKQTCLKNSVLFSDFGDC*SSIQAN Trigger: GTTTGCCTGTATGGAACTGCAACAGTCGCCAAAATC...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | TCTGTAGAGATGGTCTGCATATGTAAGCAAACCTGTTaGAAGAATTCAGTCCTTTTTAGTATCCTGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SVEMVCICKQTC*KNSVLFSILLP Trigger: GGGAAGCAGGATACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTCTACAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCATTGTCACCTGCTCTCTaGATGGAATCTATGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: IDLYYKHPCIMGEKLSHALSPAL*MESMRI Trigger: GATTCTCATAGATTCCATTCAGAGAGCAGGTGACAA...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCATTTTCAGGGCCTGTTTaGAACACAAGTTCTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IDLYYKHPCIMGEKLSHAFSGPV*NTSSFP Trigger: AGGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAA...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS-3UTR CCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTGGGATTAGAACTATATaGGAAAAAGGCTCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EMVCICKQTCLKNSVLFSGIRTI*EKGSTA Trigger: TGCAGTGGAGCCTTTTTCCCATATAGTTCTAATCCC...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| 3UTR CAA 72 bp | AAACGCTGTGTAGAACAATCTTTCAGTTCTTCATACTaGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KRCVEQSFSSSY*SLVCCFCLYSS Trigger: AGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGAAGAACTGAAAGATTGTTCTACACAGCGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR TCA 90 bp | GAGATGGTCTGCATATGTAAGCAAACCTGTTTGAAGAATTCAGTCCTTTTTAGTCTTCCTTCTAAGTTATaGAAAGTTCTACTCACGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EMVCICKQTCLKNSVLFSLPSKL*KVLLTC Trigger: GCACGTGAGTAGAACTTTTCATAACTTAGAAGGAAG...ACTAAAAAGGACTGAATTCTTCAAACAGGTTTGCTTACATATGCAGACCATCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR GCA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCAATGGCTTGGTCCTGTTaGTTCAAAGGTCAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: IDLYYKHPCIMGEKLSHAMAWSC*FKGQLY Trigger: ATAAAGTTGACCTTTGAAGCAACAGGACCAAGCCAT...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCACTTTATCGAATCCCATaGCATTTTCTCTTTGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: IDLYYKHPCIMGEKLSHALYRIP*HFLFGH Trigger: GTGTCCAAAGAGAAAATGCCATGGGATTCGATAAAG...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CCA 90 bp | CTTCTAAGTTATGAAAAGTTCTACTCACGTGCTGAAGAAACACTCTCTTTGGCTGTATTAGAGTCAGAATaGTTTTCTTTGTGCTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSYEKFYSRAEETLSLAVLESE*FSLCCS Trigger: TGAACAGCACAAAGAAAACCATTCTGACTCTAATAC...AGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTTCATAACTTAGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| 3UTR CAA 72 bp | AGCTCTTTGAACATATGCTCAGTAGAGTTCATTGACTaGTATTACAAACATCCTTGTATCATGGGAGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNICSVEFID*YYKHPCIMGEK Trigger: TTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAATGAACTCTACTGAGCATATGTTCAAAGAGCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS GCA 90 bp | CGAGCGCCCGCAGCGCGAGCAGGTAGAGTGCGAGCGCCAGCGCCGTaGGCGCCTCGGACAGCGCGGTCTTCGCAACCCGGCTCCCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: RAPAARAGRVRAPAP*APRTARSSQPGSRR Trigger: GCGGCGGGAGCCGGGTTGCGAAGACCGCGCTGTCCGAGGCGCGCACGGCGCTGGCGCTCGCACTCTACCTGCTCGCGCTGCGGGCGCTCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS GCA 90 bp | TCTGCCGGTGCGACGCGGCCGCCTCTCCCTCCCGACGCTCCGCGGTaGCGCGGTGCCGCCGCACAGCCGCTGACTCCGAGCTCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SAGATRPPLPPDAPR*RGAAAQPLTPSSTP Trigger: TGGAGTGGAGCTCGGAGTCAGCGGCTGTGCGGCGGCACCGCGGCACCGCGGAGCGTCGGGAGGGAGAGGCGGCCGCGTCGCACCGGCAGA 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS GCA 90 bp | TTCTCCGTCTTCCCCCACATCCTCCCGACGCCCTTCGCATCCTCCTaGGCTGAGGCCTCTCTCTGCCGGTGCGACGCGGCCGCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FSVFPHILPTPFASS*AEASLCRCDAAASP Trigger: GGGAGAGGCGGCCGCGTCGCACCGGCAGAGAGAGGCCTCAGCGCAGGAGGATGCGAAGGGCGTCGGGAGGATGTGGGGGAAGACGGAGAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGGGAAGCCACAGAGTGGGGCATCCTCCTCACAGTGAGCTCGGATTGTGTCCAGATAATCCCTGGCTaGGCGCGCGTCGAACTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PREATEWGILLTVSSDCVQIIPG*ARVELA Trigger: GGCGAGTTCGACGCGCGCCAAGCCAGGGATTATCTG...GACACAATCCGAGCTCACTGTGAGGAGGATGCCCCACTCTGTGGCTTCCCTTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCTGAGGGCCACTCTGAGAGGCGCCTTCCTGTTCTCACCTGACAAGGATGTGACTGGGATGCCGTaGCCAAGAGACCACTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVLRATLRGAFLFSPDKDVTGMP*PRDHWE Trigger: TTCCCAGTGGTCTCTTGGCAACGGCATCCCAGTCAC...ATCCTTGTCAGGTGAGAACAGGAAGGCGCCTCTCAGAGTGGCCCTCAGAACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS TCA 90 bp | ATTAAAGAGGAACACCACAGCGTGCTGCATGGGCTCTGGAGACGCTaGCATGACCCGGAGAACTTCGAGCATCACTGCACAGCTAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: IKEEHHSVLHGLWRR*HDPENFEHHCTANC Trigger: GCAGTTAGCTGTGCAGTGATGCTCGAAGTTCTCCGGGTCATGTCAGCGTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCTCTTTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
||
| CDS GCA 90 bp | AAGACATTTTCCTCTGCGCCATTAAAGAGGAACACCACAGCGTGCTaGATGGGCTCTGGAGACGCTGACATGACCCGGAGAACTTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KTFSSAPLKRNTTAC*MGSGDADMTRRTSS Trigger: GCTCGAAGTTCTCCGGGTCATGTCAGCGTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCTCTTTAATGGCGCAGAGGAAAATGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS GCA 90 bp | TGCAAGACATTTTCCTCTGCGCCATTAAAGAGGAACACCACAGCGTaGTGCATGGGCTCTGGAGACGCTGACATGACCCGGAGAACTTCG | + |
|
Preference number: 5 (lower is better) Translates to: CKTFSSAPLKRNTTA*CMGSGDADMTRRTS Trigger: CGAAGTTCTCCGGGTCATGTCAGCGTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCTCTTTAATGGCGCAGAGGAAAATGTCTTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
||
| CDS-3UTR CAA 90 bp | CTGACACGTACCACACGAGCAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTTAGCATTCCTGTGCTaGGGCCGCAGAAGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTRTTRAISRGSSSAVHTLAFLC*GRRSFF Trigger: GAAGAAACTTCTGCGGCCCAAGCACAGGAATGCTAA...CGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTGCTCGTGTGGTACGTGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTCAGATAATCCCTGGCTaGGCGCGCGTCGAACTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SYLSLVCCFCLYSSGGCIQIIPG*ARVELA Trigger: GGCGAGTTCGACGCGCGCCAAGCCAGGGATTATCTG...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR CAA 90 bp | ATCAGGAAGTGCACTGGAAGATACCAAGGGAAGCCACAGAGTGGGGCATCCTCCACTGGCCCAGGGATGTaGAGTAATAAAACCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IRKCTGRYQGKPQSGASSTGPGM*SNKTMA Trigger: AGCCATGGTTTTATTACTCAACATCCCTGGGCCAGT...GGAGGATGCCCCACTCTGTGGCTTCCCTTGGTATCTTCCAGTGCACTTCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000162534.2 |
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| CDS-3UTR CAA 90 bp | TGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGAATAGGTGTGACTGGCACCTGGTGAATTaGCCACTGAGTCAAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WTREWHHLEVWPCWNRCDWHLVN*PLSQSD Trigger: GTCACTTTGACTCAGTGGCAAATTCACCAGGTGCCA...GTCACACCTATTCCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | ATCAGGAAGTGCACTGGAAGATACCAAGGGAAGCCACAGAGTGGGGCATCCTCCGTGAAGGCTGTTGCTTaGTGCTTCTATCAGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IRKCTGRYQGKPQSGASSVKAVA*CFYQLD Trigger: ATCAAGCTGATAGAAGCACAAAGCAACAGCCTTCAC...GGAGGATGCCCCACTCTGTGGCTTCCCTTGGTATCTTCCAGTGCACTTCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| CDS-3UTR CAA 90 bp | TGGAAACCCACGCCGAAGGAAAGGACCAGTCTGGGAACTTCTTCTTCAGAGCATTTAGCATTCCTGTGCTaGGGCCGCAGAAGTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKPTPKERTSLGTSSSEHLAFLC*GRRSFF Trigger: GAAGAAACTTCTGCGGCCCAAGCACAGGAATGCTAA...ATGCTCTGAAGAAGAAGTTCCCAGACTGGTCCTTTCCTTCGGCGTGGGTTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
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| CDS GCA 90 bp | GGGCCGCTGTATATCTACGGAGATGCTGTGAAGGCTGTTGCTTTGTaGTTCTATCAGCTTGATCTGCTCCAAAAGGTACTGTACCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPLYIYGDAVKAVAL*FYQLDLLQKVLYRQ Trigger: CTGACGGTACAGTACCTTTTGGAGCAGATCAAGCTGATAGAAGCACAAAGCAACAGCCTTCACAGCATCTCCGTAGATATACAGCGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | GGCTGCTCCGGCTGTTGTAGGACTCCTGTGGTGCCGTCTGAATTTCGGATGAACTCAGAATGGTTTTCTTaGTGCTGTTCACAAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GCSGCCRTPVVPSEFRMNSEWFS*CCSQGR Trigger: TCTACCTTGTGAACAGCACAAAGAAAACCATTCTGA...GTTCATCCGAAATTCAGACGGCACCACAGGAGTCCTACAACAGCCGGAGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | TGCTACTCAGGAGTCAGGCCTCTGCATCAGGGCTTAGGCTTCCAAACAGACAAAGAAGAAACACTCTCTTaGGCTTTGGACTCTCGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: CYSGVRPLHQGLGFQTDKEETLS*ALDSRD Trigger: ATCCCGAGAGTCCAAAGCCAAAGAGAGTGTTTCTTC...TTTGTCTGTTTGGAAGCCTAAGCCCTGATGCAGAGGCCTGACTCCTGAGTAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | CAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCTCTTGTTGACGTGAAGGCTGTTGCTTaGTGCTTCTATCAGCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: QFPEAPLLRCTRNSALVDVKAVA*CFYQLD Trigger: ATCAAGCTGATAGAAGCACAAAGCAACAGCCTTCAC...GTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | GTGAGCTCGGATTGTGTCGTTGATCTCAGGAATGTGAGGTGTTACGTGAGACATTGGCACCTGGTGAATTaGCCACTGAGTCAAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSSDCVVDLRNVRCYVRHWHLVN*PLSQSD Trigger: GTCACTTTGACTCAGTGGCAAATTCACCAGGTGCCA...ATGTCTCACGTAACACCTCACATTCCTGAGATCAACGACACAATCCGAGCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
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| CDS-3UTR CAA 90 bp | CAATTTCCAGAGGCTCCTCTTCTGCGGTGCACACGTAACAGTGCTCTTGTTGACAAAACCATGGCTTGCTaGCAAGACATTTTCCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QFPEAPLLRCTRNSALVDKTMAC*QDIFLC Trigger: GCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTT...GTCAACAAGAGCACTGTTACGTGTGCACCGCAGAAGAGGAGCCTCTGGAAATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | GAAGTCAGAGAGCATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTGGGCACCGTGCTTCTaGAAGTCCTTGTACACACAA | + |
|
Preference number: 5 (lower is better) Translates to: EVREHPCPSELPQHDMLLWAPCF*KSLYTQ Trigger: TTGTGTGTACAAGGACTTCAAGAAGCACGGTGCCCA...GAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATGCTCTCTGACTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS-3UTR CAA 90 bp | TGCTACTCAGGAGTCAGGCCTCTGCATCAGGGCTTAGGCTTCCAAACAGACAAAAGAAAGACATATGGCTaGGTCCTGTTGCTTCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: CYSGVRPLHQGLGFQTDKRKTYG*VLLLQR Trigger: CCTTTGAAGCAACAGGACCAAGCCATATGTCTTTCT...TTTGTCTGTTTGGAAGCCTAAGCCCTGATGCAGAGGCCTGACTCCTGAGTAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CAA 90 bp | GAAGTCAGAGAGCATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCAGCAACAAATCTTCCTaGGGCACCGTGCTTCTTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVREHPCPSELPQHDMLLSNKSS*GTVLLE Trigger: TTCAAGAAGCACGGTGCCCAAGGAAGATTTGTTGCT...GAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATGCTCTCTGACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS GCA 90 bp | CACAAGTTCTTTCCCTCCGACACCAGCAGCCTCCAGGTTAATAAATaGTCGAATCAAACTGGCCCAGGGATGTTGAGTAATAAAACCATG | + |
|
Preference number: 5 (lower is better) Translates to: HKFFPSDTSSLQVNK*SNQTGPGMLSNKTM Trigger: CATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAGGCTGCTGGTGTCGGAGGGAAAGAACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS-3UTR CAA 90 bp | TTTGTATATTCTTGGACCAGGGAGTGGCACCATTTGGAAGTGTGGCCTTGTTGGATTTTCAGGGCCTGTTaGGAACACAAGTTCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FVYSWTREWHHLEVWPCWIFRAC*EHKFFP Trigger: GGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAAT...CCAACAAGGCCACACTTCCAAATGGTGCCACTCCCTGGTCCAAGAATATACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS-3UTR CAA 90 bp | CATCCTTGTCCTAGTGAACTTCCTCAGCATGACATGTTGCTCTCCTCCCCCATATGCTTCTTGAAGTCCTaGTACACACAAAGCTTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: HPCPSELPQHDMLLSSPICFLKS*YTQSFV Trigger: CACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCA...TATGGGGGAGGAGAGCAACATGTCATGCTGAGGAAGTTCACTAGGACAAGGATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
||
| CDS TCA 90 bp | GCCTCCAGGTTAATAAATGCTCGAATCAAACTGGCCCAGGGATGTTaGGTAATAAAACCATGGCTTGCTTGCAAGACATTTTCCTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ASRLINARIKLAQGC*VIKPWLACKTFSSA Trigger: CGCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
||
| CDS GCA 90 bp | TCGAATCAAACTGGCCCAGGGATGTTGAGTAATAAAACCATGGCTTaGTTGCAAGACATTTTCCTCTGCGCCATTAAAGAGGAACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SNQTGPGMLSNKTMA*LQDIFLCAIKEEHH Trigger: GTGGTGTTCCTCTTTAATGGCGCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
||
| CDS CCA 90 bp | ATCGTGCTTCTTGAAGTCCTTGTACACACAAAGCTTTGTGAGCAATaGAAAAACTACCCAGACGGCACTCATGAATGCAGAGCAAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: IVLLEVLVHTKLCEQ*KNYPDGTHECRAKP Trigger: GGGTTTTGCTCTGCATTCATGAGTGCCGTCTGGGTAGTTTTTCCATTGCTCACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCACGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS-3UTR CAA 90 bp | TCATACTTGTCCCTAGTGTGCTGCTTCTGTTTATACTCTTCTGGGGGATGCATTACTGGCCCAGGGATGTaGAGTAATAAAACCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SYLSLVCCFCLYSSGGCITGPGM*SNKTMA Trigger: AGCCATGGTTTTATTACTCAACATCCCTGGGCCAGT...AATGCATCCCCCAGAAGAGTATAAACAGAAGCAGCACACTAGGGACAAGTATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR CAA 90 bp | GGAATAAAACACAAAGTAGTCTCCTCCTCTGCTTGTGACTGGGATGCCGTTGCCTCAGAATGGTTTTCTTaGTGCTGTTCACAAGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: GIKHKVVSSSACDWDAVASEWFS*CCSQGR Trigger: TCTACCTTGTGAACAGCACAAAGAAAACCATTCTGA...GGCAACGGCATCCCAGTCACAAGCAGAGGAGGAGACTACTTTGTGTTTTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
||
| CDS TCA 90 bp | CTACGGAGATGCTGTGAAGGCTGTTGCTTTGTGCTTCTATCAGCTTaGTCTGCTCCAAAAGGTACTGTACCGTCAGAATTTCATTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRRCCEGCCFVLLSA*SAPKGTVPSEFHFL Trigger: CAGAAAATGAAATTCTGACGGTACAGTACCTTTTGGAGCAGATCAAGCTGATAGAAGCACAAAGCAACAGCCTTCACAGCATCTCCGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGCTATCAGTACTGTTACTCAGCTGTGGTTCTCTACAAGCTAGACATAAACGCTTGCCTGGTGAATTaGCCACTGAGTCAAAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSYQYCYSAVVLYKLDINACLVN*PLSQSD Trigger: GTCACTTTGACTCAGTGGCAAATTCACCAGGCAAGC...GTTTATGTCTAGCTTGTAGAGAACCACAGCTGAGTAACAGTACTGATAGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
||
| CDS-3UTR CAA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCAACTGGCCCAGGGATGTaGAGTAATAAAACCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IDLYYKHPCIMGEKLSHATGPGM*SNKTMA Trigger: AGCCATGGTTTTATTACTCAACATCCCTGGGCCAGT...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 ENSMUST00000162534.2 |
||
| CDS-3UTR CAA 90 bp | CTTCTAAGTTATGAAAAGTTCTACTCACGTGCTGAAGAAACACTCTCTTTGGCTATTTTCAGGGCCTGTTaGGAACACAAGTTCTTTCCC | + |
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Preference number: 5 (lower is better) Translates to: LLSYEKFYSRAEETLSLAIFRAC*EHKFFP Trigger: GGGAAAGAACTTGTGTTCCAAACAGGCCCTGAAAAT...AGCCAAAGAGAGTGTTTCTTCAGCACGTGAGTAGAACTTTTCATAACTTAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
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| CDS-3UTR CAA 90 bp | ATAATCAAACCCATTGATCCATATTCCAGAGTCTCTTTTTACTACGCTTCCTTCAAAACCATGGCTTGCTaGCAAGACATTTTCCTCTGC | + |
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Preference number: 5 (lower is better) Translates to: IIKPIDPYSRVSFYYASFKTMAC*QDIFLC Trigger: GCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTT...GAAGGAAGCGTAGTAAAAAGAGACTCTGGAATATGGATCAATGGGTTTGATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162534.2 |
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| CDS-3UTR CAA 90 bp | ATTGACTTGTATTACAAACATCCTTGTATCATGGGAGAGAAACTATCCCATGCATGCTTCTTGAAGTCCTaGTACACACAAAGCTTTGTG | + |
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Preference number: 5 (lower is better) Translates to: IDLYYKHPCIMGEKLSHACFLKS*YTQSFV Trigger: CACAAAGCTTTGTGTGTACAAGGACTTCAAGAAGCA...TGCATGGGATAGTTTCTCTCCCATGATACAAGGATGTTTGTAATACAAGTCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS GCA 72 bp | GCCGCCTCTCCCTCCCGACGCTCCGCGGTGCCGCGGTaGCGCCGCACAGCCGCTGACTCCGAGCTCCACTCC | + |
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Preference number: 6 (lower is better) Translates to: AASPSRRSAVPR*RRTAADSELHS Trigger: GGAGTGGAGCTCGGAGTCAGCGGCTGTGCGGCGGCACCGCGGCACCGCGGAGCGTCGGGAGGGAGAGGCGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS GCA 72 bp | CCCTGGAGCCCCGAGGTCCGGCTCAGCACCAGCCGCTaGAGCGAGAGCTGCACGAGCGCCCGCAGCGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: PWSPEVRLSTSR*SESCTSARSAS Trigger: GCTCGCGCTGCGGGCGCTCGTGCAGCTCTCGCTGCAGCGGCTGGTGCTGAGCCGGACCTCGGGGCTCCAGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS GCA 72 bp | TTCGCATCCTCCTGCGCTGAGGCCTCTCTCTGCCGGTaGGACGCGGCCGCCTCTCCCTCCCGACGCTCCGCG | + |
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Preference number: 6 (lower is better) Translates to: FASSCAEASLCR*DAAASPSRRSA Trigger: CGCGGAGCGTCGGGAGGGAGAGGCGGCCGCGTCGCACCGGCAGAGAGAGGCCTCAGCGCAGGAGGATGCGAA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS TCA 72 bp | CCACATCCTCCCGACGCCCTTCGCATCCTCCTGCGCTaGGGCCTCTCTCTGCCGGTGCGACGCGGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PHPPDALRILLR*GLSLPVRRGRL Trigger: GAGGCGGCCGCGTCGCACCGGCAGAGAGAGGCCTCAGCGCAGGAGGATGCGAAGGGCGTCGGGAGGATGTGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS GCA 72 bp | TTCCCCCACATCCTCCCGACGCCCTTCGCATCCTCCTaGGCTGAGGCCTCTCTCTGCCGGTGCGACGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: FPHILPTPFASS*AEASLCRCDAA Trigger: GGCCGCGTCGCACCGGCAGAGAGAGGCCTCAGCGCAGGAGGATGCGAAGGGCGTCGGGAGGATGTGGGGGAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159692.8 |
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| CDS CAA 90 bp | AGTCCTGGGGCCAATGGCCGTTATGTGTTCCAGATAATCCCTGGCTaGGCGCGCGTCGAACTCGCCCTGGAGCCCCGAGGTCCGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: SPGANGRYVFQIIPG*ARVELALEPRGPAQ Trigger: CTGAGCCGGACCTCGGGGCTCCAGGGCGAGTTCGACGCGCGCCAAGCCAGGGATTATCTGGAACACATAACGGCCATTGGCCCCAGGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS CCA 72 bp | TGGGGCCAATGGCCGTTATGTGTTCCAGATAATCCCTaGCTTGGCGCGCGTCGAACTCGCCCTGGAGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: WGQWPLCVPDNP*LGARRTRPGAP Trigger: CGGGGCTCCAGGGCGAGTTCGACGCGCGCCAAGCCAGGGATTATCTGGAACACATAACGGCCATTGGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS CAA 72 bp | GCCAATGGCCGTTATGTGTTCCAGATAATCCCTGGCTaGGCGCGCGTCGAACTCGCCCTGGAGCCCCGAGGT | + |
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Preference number: 6 (lower is better) Translates to: ANGRYVFQIIPG*ARVELALEPRG Trigger: ACCTCGGGGCTCCAGGGCGAGTTCGACGCGCGCCAAGCCAGGGATTATCTGGAACACATAACGGCCATTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS GCA 72 bp | TCCTCTGCGCCATTAAAGAGGAACACCACAGCGTGCTaGATGGGCTCTGGAGACGCTGACATGACCCGGAGA | + |
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Preference number: 6 (lower is better) Translates to: SSAPLKRNTTAC*MGSGDADMTRR Trigger: TCTCCGGGTCATGTCAGCGTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCTCTTTAATGGCGCAGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS GCA 72 bp | TTTTCCTCTGCGCCATTAAAGAGGAACACCACAGCGTaGTGCATGGGCTCTGGAGACGCTGACATGACCCGG | + |
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Preference number: 6 (lower is better) Translates to: FSSAPLKRNTTA*CMGSGDADMTR Trigger: CCGGGTCATGTCAGCGTCTCCAGAGCCCATGCAGCACGCTGTGGTGTTCCTCTTTAATGGCGCAGAGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS TCA 72 bp | CATGGCTTGCCTGGTGAATTTGCCACTGAGTCAAAGTaGCAGTTAGCCAGGATAGCAGACTCGGCTCCATCC | + |
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Preference number: 6 (lower is better) Translates to: HGLPGEFATESK*QLARIADSAPS Trigger: GGATGGAGCCGAGTCTGCTATCCTGGCTAACTGTCACTTTGACTCAGTGGCAAATTCACCAGGCAAGCCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054083.13 |
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| CDS CAA 90 bp | AGCCTCCAGGTTAATAAATGCTCGAATCAAACTGGCCCAGGGATGTaGAGTAATAAAACCATGGCTTGCTTGCAAGACATTTTCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLQVNKCSNQTGPGM*SNKTMACLQDIFLC Trigger: GCAGAGGAAAATGTCTTGCAAGCAAGCCATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAACCTGGAGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS TCA 72 bp | TGCTGTGAAGGCTGTTGCTTTGTGCTTCTATCAGCTTaGTCTGCTCCAAAAGGTACTGTACCGTCAGAATTT | + |
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Preference number: 6 (lower is better) Translates to: CCEGCCFVLLSA*SAPKGTVPSEF Trigger: AAATTCTGACGGTACAGTACCTTTTGGAGCAGATCAAGCTGATAGAAGCACAAAGCAACAGCCTTCACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS GCA 72 bp | TATATCTACGGAGATGCTGTGAAGGCTGTTGCTTTGTaGTTCTATCAGCTTGATCTGCTCCAAAAGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: YIYGDAVKAVAL*FYQLDLLQKVL Trigger: CAGTACCTTTTGGAGCAGATCAAGCTGATAGAAGCACAAAGCAACAGCCTTCACAGCATCTCCGTAGATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054083.13 ENSMUST00000159692.8 |
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| CDS CAA 72 bp | GTTAATAAATGCTCGAATCAAACTGGCCCAGGGATGTaGAGTAATAAAACCATGGCTTGCTTGCAAGACATT | + |
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Preference number: 6 (lower is better) Translates to: VNKCSNQTGPGM*SNKTMACLQDI Trigger: AATGTCTTGCAAGCAAGCCATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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| CDS TCA 72 bp | TTAATAAATGCTCGAATCAAACTGGCCCAGGGATGTTaGGTAATAAAACCATGGCTTGCTTGCAAGACATTT | + |
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Preference number: 6 (lower is better) Translates to: LINARIKLAQGC*VIKPWLACKTF Trigger: AAATGTCTTGCAAGCAAGCCATGGTTTTATTACTCAACATCCCTGGGCCAGTTTGATTCGAGCATTTATTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000159692.8 ENSMUST00000162534.2 |
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