Pregenerated sensors for ERMN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026830Ensembl transcript IDs: ENSMUST00000090940.6
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACATTTaGTTTAATTCACGTGGAAAGCATAAAGCCTGCACCAGCACTCAG | + |
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Preference number: 1 (lower is better) Translates to: MAPQSPRLSLDQLHI*FNSRGKHKACTSTQ Trigger: CTGAGTGCTGGTGCAGGCTTTATGCTTTCCACGTGAATTAAATCAAATGTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR GCA 90 bp | TTCAATGCATTATTTGATGTGTTGGCTCGGGTGGCACTCCACAGGTaGAGTTTTAAGCTTCTTGATTTGGGTGTTGGTCCAATAAATCAT | + |
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Preference number: 1 (lower is better) Translates to: FNALFDVLARVALHR*SFKLLDLGVGPINH Trigger: ATGATTTATTGGACCAACACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAACACATCAAATAATGCATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CCA 90 bp | ATACAATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTaGATCAACTTCACATTTGATTTAATTCACGTGGAAAGCATAAAG | + |
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Preference number: 1 (lower is better) Translates to: IQFPTQWLPSHLGSL*INFTFDLIHVESIK Trigger: CTTTATGCTTTCCACGTGAATTAAATCAAATGTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAATTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR GCA 90 bp | AATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTaGTGTGATAGAATTCGGCAAAGTATAATGATAACTGAAGAATGT | + |
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Preference number: 1 (lower is better) Translates to: NIHHHVIQVLTLDLL*CDRIRQSIMITEEC Trigger: ACATTCTTCAGTTATCATTATACTTTGCCGAATTCTATCACAGCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR TCA 90 bp | CAGCATTTCTCTCATTTCATTCAGAACATGCACATTTGTCCTAAATaGAATCAGCAGGCTCAACACTCTAGGGGTAACAGATCTTTTACA | + |
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Preference number: 1 (lower is better) Translates to: QHFSHFIQNMHICPK*NQQAQHSRGNRSFT Trigger: TGTAAAAGATCTGTTACCCCTAGAGTGTTGAGCCTGCTGATTTCATTTAGGACAAATGTGCATGTTCTGAATGAAATGAGAGAAATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CCA 90 bp | GTGTTGGCTCGGGTGGCACTCCACAGGTGCAGTTTTAAGCTTCTTGATTTGGGTCAATTCCCTACTCAATaGCTCCCCAGTCACCTAGGC | + |
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Preference number: 2 (lower is better) Translates to: VLARVALHRCSFKLLDLGQFPTQ*LPSHLG Trigger: GCCTAGGTGACTGGGGAGCCATTGAGTAGGGAATTG...ACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CCA 90 bp | ATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACTTTTCGGCTTCTCATTaGCCTGAAGAAGAAAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: IPYSMAPQSPRLSLDQLHFSASH*PEEEKE Trigger: CTCTTTTTCTTCTTCAGGCCAATGAGAAGCCGAAAA...GTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CCA 90 bp | AATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCTGTGATCACCTAGGCTCTCTCTaGATCAACTTCACATTTGAT | + |
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Preference number: 2 (lower is better) Translates to: NIHHHVIQVLTLDLLCCDHLGSL*INFTFD Trigger: ATCAAATGTGAAGTTGATCCAGAGAGAGCCTAGGTG...ATCACAGCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CAA 90 bp | TTGGCTCGGGTGGCACTCCACAGGTGCAGTTTTAAGCTTCTTGATTaGGGTGTTGGTCCAATAAATCATATATTCCCTATGACTATCAGC | + |
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Preference number: 2 (lower is better) Translates to: LARVALHRCSFKLLD*GVGPINHIFPMTIS Trigger: GCTGATAGTCATAGGGAATATATGATTTATTGGACCAACACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CAA 90 bp | TTTCCATGTTGCTTTATGGTGAAGAAGACATTAAGCTTGCACATCTaGCAAATGAGGCAGCAGAAGACATCTCAGCGGAAGGAAGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: FPCCFMVKKTLSLHI*QMRQQKTSQRKEVR Trigger: TCTAACTTCCTTCCGCTGAGATGTCTTCTGCTGCCTCATTTGCAAGATGTGCAAGCTTAATGTCTTCTTCACCATAAAGCAACATGGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CAA 90 bp | CTATGGTTATTTCCATGTTGCTTTATGGTGAAGAAGACATTAAGCTaGCACATCTTGCAAATGAGGCAGCAGAAGACATCTCAGCGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LWLFPCCFMVKKTLS*HILQMRQQKTSQRK Trigger: CTTCCGCTGAGATGTCTTCTGCTGCCTCATTTGCAAGATGTGCAAGCTTAATGTCTTCTTCACCATAAAGCAACATGGAAATAACCATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR GCA 90 bp | ACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTCCATCTAGGAAAGCATAAAGCCTaGACCAGCACTCAGCAAACA | + |
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Preference number: 2 (lower is better) Translates to: TICYPFHVSSIVTQHLHLGKHKA*TSTQQT Trigger: TGTTTGCTGAGTGCTGGTGCAGGCTTTATGCTTTCC...TAGATGGAGATGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR GCA 90 bp | AATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCTGTGATATTAATACAAGAAAGTaGGGTAATGAAGTAGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: NIHHHVIQVLTLDLLCCDINTRK*GNEVGH Trigger: ATGCCCTACTTCATTACCGCACTTTCTTGTATTAAT...ATCACAGCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR TCA 90 bp | ACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTCCATCTAATTCAATGCATTATTTaGTGTGTTGGCTCGGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: TICYPFHVSSIVTQHLHLIQCII*CVGSGG Trigger: GCCACCCGAGCCAACACATCAAATAATGCATTGAAT...TAGATGGAGATGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR TCA 90 bp | ACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTCCATCTATTTACACAGACAGAGTaGAGCAAACAATGGGATGAA | + |
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Preference number: 2 (lower is better) Translates to: TICYPFHVSSIVTQHLHLFTQTE*SKQWDE Trigger: TTCATCCCATTGTTTGCTTCACTCTGTCTGTGTAAA...TAGATGGAGATGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR GCA 90 bp | CCATTCATCTGTCAACAAAAGATAACTAAGATATCTAAGACATGCCAGCAGTCACTCCTGATGCTGCATTaGTTTGTCCATAAGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: PFICQQKITKISKTCQQSLLMLH*FVHKNK Trigger: TTTATTCTTATGGACAAAGCAATGCAGCATCAGGAG...TGACTGCTGGCATGTCTTAGATATCTTAGTTATCTTTTGTTGACAGATGAATGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR GCA 90 bp | CCATTCATCTGTCAACAAAAGATAACTAAGATATCTAAGACATGCCAGCAGTCATGGTTATTTCCATGTTaGTTTATGGTGAAGAAGACA | + |
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Preference number: 2 (lower is better) Translates to: PFICQQKITKISKTCQQSWLFPC*FMVKKT Trigger: TGTCTTCTTCACCATAAAGCAACATGGAAATAACCA...TGACTGCTGGCATGTCTTAGATATCTTAGTTATCTTTTGTTGACAGATGAATGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CAA 90 bp | GACCCAAATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCGAATTCACTGAACAGTaGCACCTAGAAAGGAGATCT | + |
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Preference number: 3 (lower is better) Translates to: DPNIHHHVIQVLTLDLLCEFTEQ*HLERRS Trigger: AGATCTCCTTTCTAGGTGCAACTGTTCAGTGAATTC...GCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATTTGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CAA 90 bp | GACCCAAATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCTATTCAATGCATTATTaGATGTGTTGGCTCGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: DPNIHHHVIQVLTLDLLCYSMHY*MCWLGW Trigger: CCACCCGAGCCAACACATCAAATAATGCATTGAATA...GCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATTTGGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR GCA 72 bp | TTATTTGATGTGTTGGCTCGGGTGGCACTCCACAGGTaGAGTTTTAAGCTTCTTGATTTGGGTGTTGGTCCA | + |
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Preference number: 3 (lower is better) Translates to: LFDVLARVALHR*SFKLLDLGVGP Trigger: TGGACCAACACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAACACATCAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CAA 90 bp | GACCCAAATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCATGGTTATTTCCATGTaGCTTTATGGTGAAGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: DPNIHHHVIQVLTLDLLCMVISM*LYGEED Trigger: GTCTTCTTCACCATAAAGCAACATGGAAATAACCAT...GCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATTTGGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CCA 72 bp | CCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTaGATCAACTTCACATTTGATTTAATTCACGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: PTQWLPSHLGSL*INFTFDLIHVE Trigger: TTCCACGTGAATTAAATCAAATGTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CCA 72 bp | AATGAAAACCATCATCCAATACAATTCCCTACTCAATaGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAAC | + |
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Preference number: 3 (lower is better) Translates to: NENHHPIQFPTQ*LPSHLGSLWIN Trigger: GTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAATTGTATTGGATGATGGTTTTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR TCA 72 bp | CAGTCACCTAGGCTCTCTCTGGATCAACTTCACATTTaGTTTAATTCACGTGGAAAGCATAAAGCCTGCACC | + |
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Preference number: 3 (lower is better) Translates to: QSPRLSLDQLHI*FNSRGKHKACT Trigger: GGTGCAGGCTTTATGCTTTCCACGTGAATTAAATCAAATGTGAAGTTGATCCAGAGAGAGCCTAGGTGACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR TCA 72 bp | AAGCCTGCACCAGCACTCAGCAAACAGAATTCTGACTaGCAATTGCTTAAGCTTTTAGTGAGGGAATTCACT | + |
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Preference number: 3 (lower is better) Translates to: KPAPALSKQNSD*QLLKLLVREFT Trigger: AGTGAATTCCCTCACTAAAAGCTTAAGCAATTGTCAGTCAGAATTCTGTTTGCTGAGTGCTGGTGCAGGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CAA 90 bp | GAACAGTTGCACCTAGAAAGGAGATCTGCTGAATTTTTATTCAGTAGATGCCACACTGTTCTCTTTCCCTaGACTTGCCTCTCTTACTAT | + |
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Preference number: 3 (lower is better) Translates to: EQLHLERRSAEFLFSRCHTVLFP*TCLSYY Trigger: ATAGTAAGAGAGGCAAGTCAAGGGAAAGAGAACAGT...GTGGCATCTACTGAATAAAAATTCAGCAGATCTCCTTTCTAGGTGCAACTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR TCA 72 bp | TCTCATTTCATTCAGAACATGCACATTTGTCCTAAATaGAATCAGCAGGCTCAACACTCTAGGGGTAACAGA | + |
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Preference number: 3 (lower is better) Translates to: SHFIQNMHICPK*NQQAQHSRGNR Trigger: TCTGTTACCCCTAGAGTGTTGAGCCTGCTGATTTCATTTAGGACAAATGTGCATGTTCTGAATGAAATGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CCA 72 bp | AAATATTCAATGCATTATTTGATGTGTTGGCTCGGGTaGCACTCCACAGGTGCAGTTTTAAGCTTCTTGATT | + |
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Preference number: 3 (lower is better) Translates to: KYSMHYLMCWLG*HSTGAVLSFLI Trigger: AATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAACACATCAAATAATGCATTGAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR-3UTR CAA 90 bp | ACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTCCATCTAAAGAAGACATTAAGCTaGCACATCTTGCAAATGAGG | + |
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Preference number: 3 (lower is better) Translates to: TICYPFHVSSIVTQHLHLKKTLS*HILQMR Trigger: CCTCATTTGCAAGATGTGCAAGCTTAATGTCTTCTT...TAGATGGAGATGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR GCA 72 bp | ATCTGTCAACAAAAGATAACTAAGATATCTAAGACATaGCAGCAGTCACATAATCTCCAACAGGTATCAGGT | + |
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Preference number: 3 (lower is better) Translates to: ICQQKITKISKT*QQSHNLQQVSG Trigger: ACCTGATACCTGTTGGAGATTATGTGACTGCTGGCATGTCTTAGATATCTTAGTTATCTTTTGTTGACAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CCA 72 bp | CCTGGAATCATAAAATCTCAGCAAAATCTTCATGAGTaGGTATCAATTGAGTGTAATCTAGGTGAGTTTAAA | + |
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Preference number: 3 (lower is better) Translates to: PGIIKSQQNLHE*VSIECNLGEFK Trigger: TTTAAACTCACCTAGATTACACTCAATTGATACCCACTCATGAAGATTTTGCTGAGATTTTATGATTCCAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR GCA 90 bp | AATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCTGTGATGTTGGGAGCCAGGGCTaGCTAGTGGGGAGTCCTCCC | + |
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Preference number: 4 (lower is better) Translates to: NIHHHVIQVLTLDLLCCDVGSQG*LVGSPP Trigger: GGGAGGACTCCCCACTAGGCAGCCCTGGCTCCCAAC...ATCACAGCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR TCA 90 bp | GTGTTGGCTCGGGTGGCACTCCACAGGTGCAGTTTTAAGCTTCTTGATTTGGGTGTCTCCTGCCTGGTTTaGCTGCTAGGCTGTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: VLARVALHRCSFKLLDLGVSCLV*LLGCWP Trigger: TGGCCAACAGCCTAGCAGTCAAACCAGGCAGGAGAC...ACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CCA 90 bp | GTGTTGGCTCGGGTGGCACTCCACAGGTGCAGTTTTAAGCTTCTTGATTTGGGTCTTCTTTCCGAACACTaGCTGCTCATCTGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VLARVALHRCSFKLLDLGLLSEH*LLIWGP Trigger: GGGACCCCAGATGAGCAGCCAGTGTTCGGAAAGAAG...ACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCACCCGAGCCAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR GCA 90 bp | ATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACCTCTGCTCAAGCTGTTaGTGGGCAGTTCTTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: IPYSMAPQSPRLSLDQLHLCSSC*WAVLSF Trigger: GAAGGAAAGAACTGCCCAGCAACAGCTTGAGCAGAG...GTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CCA 90 bp | ACGACCTTTAACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTGGGGTCCCAGGTTaGGAGCCAGGGCTGCCTAGT | + |
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Preference number: 4 (lower is better) Translates to: TTFNYMLPISCKLHSNATSGVPG*EPGLPS Trigger: ACTAGGCAGCCCTGGCTCCCAACCTGGGACCCCAGA...TGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGTTAAAGGTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR GCA 90 bp | ATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACTCGTCACACTTAGAATaGAAGATGTCAACTGGACGA | + |
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Preference number: 4 (lower is better) Translates to: IPYSMAPQSPRLSLDQLHSSHLE*KMSTGR Trigger: TCGTCCAGTTGACATCTTGCATTCTAAGTGTGACGA...GTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR GCA 90 bp | ATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACGAAAGCCATGTCTTCTaGACTTATTTCTTGGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: IPYSMAPQSPRLSLDQLHESHVF*TYFLER Trigger: TCTCTCCAAGAAATAAGTGCAGAAGACATGGCTTTC...GTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CCA 90 bp | ATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACCATCAATTCTCTGTTTaGTGTTGCCTTTCCTTATTT | + |
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Preference number: 4 (lower is better) Translates to: IPYSMAPQSPRLSLDQLHHQFSV*CCLSLF Trigger: AAATAAGGAAAGGCAACACCAAACAGAGAATTGATG...GTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CAA 72 bp | GTGGCACTCCACAGGTGCAGTTTTAAGCTTCTTGATTaGGGTGTTGGTCCAATAAATCATATATTCCCTATG | + |
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Preference number: 4 (lower is better) Translates to: VALHRCSFKLLD*GVGPINHIFPM Trigger: CATAGGGAATATATGATTTATTGGACCAACACCCAAATCAAGAAGCTTAAAACTGCACCTGTGGAGTGCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CAA 72 bp | TTTCCATGTTGCTTTATGGTGAAGAAGACATTAAGCTaGCACATCTTGCAAATGAGGCAGCAGAAGACATCT | + |
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Preference number: 4 (lower is better) Translates to: FPCCFMVKKTLS*HILQMRQQKTS Trigger: AGATGTCTTCTGCTGCCTCATTTGCAAGATGTGCAAGCTTAATGTCTTCTTCACCATAAAGCAACATGGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CCA 90 bp | ACGACCTTTAACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACAGAAGAGGTTCTCTTCTaGGTTTTCATTGAGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: TTFNYMLPISCKLHSNATEEVLF*VFIEDL Trigger: AAGATCCTCAATGAAAACCCAGAAGAGAACCTCTTC...TGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGTTAAAGGTCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| 3UTR CAA 72 bp | TTGCTTAAGCTTTTAGTGAGGGAATTCACTGAACAGTaGCACCTAGAAAGGAGATCTGCTGAATTTTTATTC | + |
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Preference number: 4 (lower is better) Translates to: LLKLLVREFTEQ*HLERRSAEFLF Trigger: GAATAAAAATTCAGCAGATCTCCTTTCTAGGTGCAACTGTTCAGTGAATTCCCTCACTAAAAGCTTAAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TCTCCCTTCTTTCCGAACACTGGCTGCTCATCTGGGGTCCCAGGTTaGGAGCCAGGGCTGCCTAGTGGGGAGTCCTCCCTTGCAAGGCTT | + |
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Preference number: 5 (lower is better) Translates to: SPFFPNTGCSSGVPG*EPGLPSGESSLARL Trigger: AAGCCTTGCAAGGGAGGACTCCCCACTAGGCAGCCCTGGCTCCCAACCTGGGACCCCAGATGAGCAGCCAGTGTTCGGAAAGAAGGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TGTCTCCTGCCTGGTTTGACTGCTAGGCTGTTGGCCATTCTCAGGTaGTCTGTCCCCATTGCACTCTGTCCCGCTCAGTGTCTCAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: CLLPGLTARLLAILR*SVPIALCPAQCLRS Trigger: ACTCCTGAGACACTGAGCGGGACAGAGTGCAATGGGGACAGACCACCTGAGAATGGCCAACAGCCTAGCAGTCAAACCAGGCAGGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | ATTCCCTACTCAATGGCTCCCCAGTCACCTAGGCTCTCTCTGGATCAACTTCACTGTCTCCTGCCTGGTTaGACTGCTAGGCTGTTGGCC | + |
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Preference number: 5 (lower is better) Translates to: IPYSMAPQSPRLSLDQLHCLLPG*TARLLA Trigger: GGCCAACAGCCTAGCAGTCAAACCAGGCAGGAGACA...GTGAAGTTGATCCAGAGAGAGCCTAGGTGACTGGGGAGCCATTGAGTAGGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 90 bp | GTTGCTGGGCAGTTCTTTCCTTCTGTCTACTCACTTCCAGGTTACTaGTGTTCGGAGGAATCTTCTTCCACGGATGCCCTTCTCGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: VAGQFFPSVYSLPGY*CSEESSSTDALLGK Trigger: CTTTCCGAGAAGGGCATCCGTGGAAGAAGATTCCTCCGAACAGCAGTAACCTGGAAGTGAGTAGACAGAAGGAAAGAACTGCCCAGCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | GACCCAAATATCCACCACCATGTCATCCAGGTGTTAACTCTCGACCTGCTGTGCTCTCTGCTCAAGCTGTaGCTGGGCAGTTCTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: DPNIHHHVIQVLTLDLLCSLLKL*LGSSFL Trigger: AAGGAAAGAACTGCCCAGCAACAGCTTGAGCAGAGA...GCACAGCAGGTCGAGAGTTAACACCTGGATGACATGGTGGTGGATATTTGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TCCTCGTCACACTTAGAATGCAAGATGTCAACTGGACGAGATTTCTaGAACCCCAGCCATTCGATTTCAGTTGTACTCGCATCTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SSSHLECKMSTGRDF*NPSHSISVVLASPL Trigger: GAGAGGAGATGCGAGTACAACTGAAATCGAATGGCTGGGGTTCCAGAAATCTCGTCCAGTTGACATCTTGCATTCTAAGTGTGACGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 90 bp | TTCCAAACTTCTTCTTCTTCTTCTTCTTCCTCGTCACACTTAGAATaGAAGATGTCAACTGGACGAGATTTCTGGAACCCCAGCCATTCG | + |
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Preference number: 5 (lower is better) Translates to: FQTSSSSSSSSSHLE*KMSTGRDFWNPSHS Trigger: CGAATGGCTGGGGTTCCAGAAATCTCGTCCAGTTGACATCTTGCATTCTAAGTGTGACGAGGAAGAAGAAGAAGAAGAAGAAGTTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TTATTTTCCGATAGGATATCGTGTTGTATCTGGAATAAGAATTCCTaGCGATATCTCCCTTCTTTCCGAACACTGGCTGCTCATCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LFSDRISCCIWNKNS*RYLPSFRTLAAHLG Trigger: CCCCAGATGAGCAGCCAGTGTTCGGAAAGAAGGGAGATATCGCCAGGAATTCTTATTCCAGATACAACACGATATCCTATCGGAAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | ACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTCCATCTAGTGGGGAGTCCTCCCTaGCAAGGCTTTCCTCTTTTA | + |
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Preference number: 5 (lower is better) Translates to: TICYPFHVSSIVTQHLHLVGSPP*QGFPLL Trigger: TAAAAGAGGAAAGCCTTGCAAGGGAGGACTCCCCAC...TAGATGGAGATGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS TCA 90 bp | GGAAAGCCATGTCTTCTGCACTTATTTCTTGGAGAGAAAGATCTTTaGTGGCCTGGTGAACAACGAAGAGGTTCTCTTCTGGGTTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: GKPCLLHLFLGEKDL*WPGEQRRGSLLGFH Trigger: ATGAAAACCCAGAAGAGAACCTCTTCGTTGTTCACCAGGCCATCAAAGATCTTTCTCTCCAAGAAATAAGTGCAGAAGACATGGCTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TTCTTCTTCTTCTTCCTCGTCACACTTAGAATGCAAGATGTCAACTaGACGAGATTTCTGGAACCCCAGCCATTCGATTTCAGTTGTACT | + |
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Preference number: 5 (lower is better) Translates to: FFFFFLVTLRMQDVN*TRFLEPQPFDFSCT Trigger: AGTACAACTGAAATCGAATGGCTGGGGTTCCAGAAATCTCGTCCAGTTGACATCTTGCATTCTAAGTGTGACGAGGAAGAAGAAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | CCATTCATCTGTCAACAAAAGATAACTAAGATATCTAAGACATGCCAGCAGTCATTGACTGCTAGGCTGTaGGCCATTCTCAGGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: PFICQQKITKISKTCQQSLTARL*AILRWS Trigger: AGACCACCTGAGAATGGCCAACAGCCTAGCAGTCAA...TGACTGCTGGCATGTCTTAGATATCTTAGTTATCTTTTGTTGACAGATGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | ACGACCTTTAACTATATGCTACCCATTTCATGTAAGCTCCATAGTAACGCAACATCTCATCTGCATCAGTaGTCTCCTGCCTGGTTTGAC | + |
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Preference number: 5 (lower is better) Translates to: TTFNYMLPISCKLHSNATSHLHQ*SPAWFD Trigger: GTCAAACCAGGCAGGAGACAACTGATGCAGATGAGA...TGTTGCGTTACTATGGAGCTTACATGAAATGGGTAGCATATAGTTAAAGGTCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TGGTGTTGCCTTTCCTTATTTTCCGATAGGATATCGTGTTGTATCTaGAATAAGAATTCCTGGCGATATCTCCCTTCTTTCCGAACACTG | + |
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Preference number: 5 (lower is better) Translates to: WCCLSLFSDRISCCI*NKNSWRYLPSFRTL Trigger: CAGTGTTCGGAAAGAAGGGAGATATCGCCAGGAATTCTTATTCCAGATACAACACGATATCCTATCGGAAAATAAGGAAAGGCAACACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 90 bp | TTCCAGTTTCTTCTTGATTTTCTTTTGCAGGTAAATCTTCAAGACTaGGTTCAACCTTGTAGTATGCCTGGGTCTCATCTGCATCAGTTG | + |
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Preference number: 5 (lower is better) Translates to: FQFLLDFLLQVNLQD*VQPCSMPGSHLHQL Trigger: CAACTGATGCAGATGAGACCCAGGCATACTACAAGGTTGAACCCAGTCTTGAAGATTTACCTGCAAAAGAAAATCAAGAAGAAACTGGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | GAACAGTTGCACCTAGAAAGGAGATCTGCTGAATTTTTATTCAGTAGATGCCACATTCTCTGTTTGGTGTaGCCTTTCCTTATTTTCCGA | + |
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Preference number: 5 (lower is better) Translates to: EQLHLERRSAEFLFSRCHILCLV*PFLIFR Trigger: TCGGAAAATAAGGAAAGGCAACACCAAACAGAGAAT...GTGGCATCTACTGAATAAAAATTCAGCAGATCTCCTTTCTAGGTGCAACTGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS-3UTR CAA 90 bp | GAACAGTTGCACCTAGAAAGGAGATCTGCTGAATTTTTATTCAGTAGATGCCACTCATCAATTCTCTGTTaGGTGTTGCCTTTCCTTATT | + |
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Preference number: 5 (lower is better) Translates to: EQLHLERRSAEFLFSRCHSSILC*VLPFLI Trigger: AATAAGGAAAGGCAACACCAAACAGAGAATTGATGA...GTGGCATCTACTGAATAAAAATTCAGCAGATCTCCTTTCTAGGTGCAACTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 90 bp | ATAAGTGCATCATTGACTCAAACTCATCAATTCTCTGTTTGGTGTTaGCTTTCCTTATTTTCCGATAGGATATCGTGTTGTATCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: ISASLTQTHQFSVWC*LSLFSDRISCCIWN Trigger: ATTCCAGATACAACACGATATCCTATCGGAAAATAAGGAAAGGCAACACCAAACAGAGAATTGATGAGTTTGAGTCAATGATGCACTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 72 bp | GCTGCTCATCTGGGGTCCCAGGTTGGGAGCCAGGGCTaGCTAGTGGGGAGTCCTCCCTTGCAAGGCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: AAHLGSQVGSQG*LVGSPPLQGFP Trigger: AGGAAAGCCTTGCAAGGGAGGACTCCCCACTAGGCAGCCCTGGCTCCCAACCTGGGACCCCAGATGAGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 72 bp | TTCCTGGCGATATCTCCCTTCTTTCCGAACACTGGCTaGTCATCTGGGGTCCCAGGTTGGGAGCCAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: FLAISPFFPNTG*SSGVPGWEPGL Trigger: CAGCCCTGGCTCCCAACCTGGGACCCCAGATGAGCAGCCAGTGTTCGGAAAGAAGGGAGATATCGCCAGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 72 bp | CCTGGTTTGACTGCTAGGCTGTTGGCCATTCTCAGGTaGTCTGTCCCCATTGCACTCTGTCCCGCTCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: PGLTARLLAILR*SVPIALCPAQC Trigger: ACACTGAGCGGGACAGAGTGCAATGGGGACAGACCACCTGAGAATGGCCAACAGCCTAGCAGTCAAACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 72 bp | AGAATTCCTGGCGATATCTCCCTTCTTTCCGAACACTaGCTGCTCATCTGGGGTCCCAGGTTGGGAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: RIPGDISLLSEH*LLIWGPRLGAR Trigger: CCTGGCTCCCAACCTGGGACCCCAGATGAGCAGCCAGTGTTCGGAAAGAAGGGAGATATCGCCAGGAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CAA 72 bp | CTAGGCTGTTGGCCATTCTCAGGTGGTCTGTCCCCATaGCACTCTGTCCCGCTCAGTGTCTCAGGAGTATCT | + |
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Preference number: 6 (lower is better) Translates to: LGCWPFSGGLSP*HSVPLSVSGVS Trigger: AGATACTCCTGAGACACTGAGCGGGACAGAGTGCAATGGGGACAGACCACCTGAGAATGGCCAACAGCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CAA 72 bp | GTTGGGAGCCAGGGCTGCCTAGTGGGGAGTCCTCCCTaGCAAGGCTTTCCTCTTTTAATGGAGAACCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: VGSQGCLVGSPP*QGFPLLMENLL Trigger: GAGAAGGTTCTCCATTAAAAGAGGAAAGCCTTGCAAGGGAGGACTCCCCACTAGGCAGCCCTGGCTCCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CAA 90 bp | TGTCAACTGGACGAGATTTCTGGAACCCCAGCCATTCGATTTCAGTaGTACTCGCATCTCCTCTCTGCTCAAGCTGTTGCTGGGCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CQLDEISGTPAIRFQ*YSHLLSAQAVAGQF Trigger: GAACTGCCCAGCAACAGCTTGAGCAGAGAGGAGATGCGAGTACAACTGAAATCGAATGGCTGGGGTTCCAGAAATCTCGTCCAGTTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 72 bp | ACTGGGTTCAACCTTGTAGTATGCCTGGGTCTCATCTaGATCAGTTGTCTCCTGCCTGGTTTGACTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: TGFNLVVCLGLI*ISCLLPGLTAR Trigger: CCTAGCAGTCAAACCAGGCAGGAGACAACTGATGCAGATGAGACCCAGGCATACTACAAGGTTGAACCCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 72 bp | GTTGTACTCGCATCTCCTCTCTGCTCAAGCTGTTGCTaGGCAGTTCTTTCCTTCTGTCTACTCACTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: VVLASPLCSSCC*AVLSFCLLTSR Trigger: CCTGGAAGTGAGTAGACAGAAGGAAAGAACTGCCCAGCAACAGCTTGAGCAGAGAGGAGATGCGAGTACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 72 bp | TCAGTTGTACTCGCATCTCCTCTCTGCTCAAGCTGTTaGTGGGCAGTTCTTTCCTTCTGTCTACTCACTTCC | + |
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Preference number: 6 (lower is better) Translates to: SVVLASPLCSSC*WAVLSFCLLTS Trigger: GGAAGTGAGTAGACAGAAGGAAAGAACTGCCCAGCAACAGCTTGAGCAGAGAGGAGATGCGAGTACAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CAA 72 bp | GACGAGATTTCTGGAACCCCAGCCATTCGATTTCAGTaGTACTCGCATCTCCTCTCTGCTCAAGCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: DEISGTPAIRFQ*YSHLLSAQAVA Trigger: AGCAACAGCTTGAGCAGAGAGGAGATGCGAGTACAACTGAAATCGAATGGCTGGGGTTCCAGAAATCTCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 72 bp | AGGTTACTGCTGTTCGGAGGAATCTTCTTCCACGGATaGCCTTCTCGGAAAGCCATGTCTTCTGCACTTATT | + |
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Preference number: 6 (lower is better) Translates to: RLLLFGGIFFHG*PSRKAMSSALI Trigger: AATAAGTGCAGAAGACATGGCTTTCCGAGAAGGGCATCCGTGGAAGAAGATTCCTCCGAACAGCAGTAACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS GCA 72 bp | CAGTTCTTTCCTTCTGTCTACTCACTTCCAGGTTACTaGTGTTCGGAGGAATCTTCTTCCACGGATGCCCTT | + |
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Preference number: 6 (lower is better) Translates to: QFFPSVYSLPGY*CSEESSSTDAL Trigger: AAGGGCATCCGTGGAAGAAGATTCCTCCGAACAGCAGTAACCTGGAAGTGAGTAGACAGAAGGAAAGAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 72 bp | CACTTAGAATGCAAGATGTCAACTGGACGAGATTTCTaGAACCCCAGCCATTCGATTTCAGTTGTACTCGCA | + |
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Preference number: 6 (lower is better) Translates to: HLECKMSTGRDF*NPSHSISVVLA Trigger: TGCGAGTACAACTGAAATCGAATGGCTGGGGTTCCAGAAATCTCGTCCAGTTGACATCTTGCATTCTAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 72 bp | TTCTTCCTCGTCACACTTAGAATGCAAGATGTCAACTaGACGAGATTTCTGGAACCCCAGCCATTCGATTTC | + |
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Preference number: 6 (lower is better) Translates to: FFLVTLRMQDVN*TRFLEPQPFDF Trigger: GAAATCGAATGGCTGGGGTTCCAGAAATCTCGTCCAGTTGACATCTTGCATTCTAAGTGTGACGAGGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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| CDS CCA 72 bp | GATAGGATATCGTGTTGTATCTGGAATAAGAATTCCTaGCGATATCTCCCTTCTTTCCGAACACTGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: DRISCCIWNKNS*RYLPSFRTLAA Trigger: AGCAGCCAGTGTTCGGAAAGAAGGGAGATATCGCCAGGAATTCTTATTCCAGATACAACACGATATCCTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090940.6 |
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