Pregenerated sensors for ERMARD (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036552Ensembl transcript IDs: ENSMUST00000097393.11, ENSMUST00000226213.2, ENSMUST00000226384.2, ENSMUST00000226561.2, ENSMUST00000226599.2, ENSMUST00000227252.2, ENSMUST00000228518.2, ENSMUST00000228803.2
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTTCCAGAGGTTGGCTGTGTGCTGGGGTGACGGTAAAATGCAATaGGACAGACAGGATGTGCAGCTGCCACCAAGTACCACCAAGGTC | + |
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Preference number: 1 (lower is better) Translates to: FFQRLAVCWGDGKMQ*DRQDVQLPPSTTKV Trigger: GACCTTGGTGGTACTTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGGAAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR GCA 90 bp | TTACGTTCTTCCAGAGGTTGGCTGTGTGCTGGGGTGACGGTAAAATaGAATGGGACAGACAGGATGTGCAGCTGCCACCAAGTACCACCA | + |
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Preference number: 1 (lower is better) Translates to: LRSSRGWLCAGVTVK*NGTDRMCSCHQVPP Trigger: TGGTGGTACTTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGGAAGAACGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR CCA 90 bp | CTCAGATACTGCTGTTGTTCCTCAGCGCCCTTATCACGAACAGCATaGACACTGGCCAACTCCAGTGCAAGGAGCAACAAAATCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: LRYCCCSSAPLSRTA*TLANSSARSNKIRE Trigger: TTCCCTGATTTTGTTGCTCCTTGCACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAAGGGCGCTGAGGAACAACAGCAGTATCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR CCA 90 bp | CTCAGCCCCAAATGTGAATTTGGTGGATCTCTGGTACAACTAGGATaGCTGTTCTGGTCTTCTGCCTCTCTGAGCTGCCTACATGTCACC | + |
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Preference number: 1 (lower is better) Translates to: LSPKCEFGGSLVQLG*LFWSSASLSCLHVT Trigger: GGTGACATGTAGGCAGCTCAGAGAGGCAGAAGACCAGAACAGCCATCCTAGTTGTACCAGAGATCCACCAAATTCACATTTGGGGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR CCA 90 bp | CCGCAACTTTGTATTTTTACGTTCTTCCAGAGGTTGGCTGTGTGCTaGGGTGACGGTAAAATGCAATGGGACAGACAGGATGTGCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: PQLCIFTFFQRLAVC*GDGKMQWDRQDVQL Trigger: CAGCTGCACATCCTGTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGGAAGAACGTAAAAATACAAAGTTGCGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR TCA 90 bp | GGGGTGAAGGTACATACACTGAGGATGGTTTCTCAGCCCCAAATGTaGATTTGGTGGATCTCTGGTACAACTAGGATGGCTGTTCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: GVKVHTLRMVSQPQM*IWWISGTTRMAVLV Trigger: GACCAGAACAGCCATCCTAGTTGTACCAGAGATCCACCAAATTCACATTTGGGGCTGAGAAACCATCCTCAGTGTATGTACCTTCACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR TCA 90 bp | GCCGTCAACAGCAACATGGCTGAACAGTATTTTGGAGGAATATCTTaGGGGGAAGCAAAGCCATGCCACAAGACGTTTCTCAGGTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: AVNSNMAEQYFGGIS*GEAKPCHKTFLRLS Trigger: ACTCAACCTGAGAAACGTCTTGTGGCATGGCTTTGCTTCCCCTCAAGATATTCCTCCAAAATACTGTTCAGCCATGTTGCTGTTGACGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR CCA 90 bp | GCATGTCTGTGGACCATGTATCCTTTATGTGACTCATTGAAGACATaGCACCATGTAGATATTGTTCCTCAGATACTGCTGTTGTTCCTC | + |
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Preference number: 1 (lower is better) Translates to: ACLWTMYPLCDSLKT*HHVDIVPQILLLFL Trigger: GAGGAACAACAGCAGTATCTGAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR TCA 90 bp | CTAGAAGTGATGCAGAGCATGTCTGTGGACCATGTATCCTTTATGTaGCTCATTGAAGACATGGCACCATGTAGATATTGTTCCTCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LEVMQSMSVDHVSFM*LIEDMAPCRYCSSD Trigger: ATCTGAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGCTCTGCATCACTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR TCA 90 bp | TTAATTAACAAAGCAGATTCAGAGGTGGGTTCCACTCCCTTGAAATaGTGCAATATGATGAAATGGTCCAGGATACAGGACCTTGTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LINKADSEVGSTPLK*CNMMKWSRIQDLVL Trigger: CAACACAAGGTCCTGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGAGTGGAACCCACCTCTGAATCTGCTTTGTTAATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227252.2 ENSMUST00000228803.2 |
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| 3UTR TCA 90 bp | CACCAAGGTCTCCTCTATAGCTCAGTGTCACGACCAAAAATACCTTaGTTCGTGATTTCTTTGTCAGCTTATGTCAACTTTATTTGTGGT | + |
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Preference number: 1 (lower is better) Translates to: HQGLLYSSVSRPKIP*FVISLSAYVNFICG Trigger: ACCACAAATAAAGTTGACATAAGCTGACAAAGAAATCACGAATCAAGGTATTTTTGGTCGTGACACTGAGCTATAGAGGAGACCTTGGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| 3UTR TCA 90 bp | CTAGAAGTGATGCAGAGCATGTCTGTGGACCATGTATCCTTTATGTaGCTCATTGAAGACATGGCACCATGTAGATATTGTTCCTTTAAA | + |
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Preference number: 1 (lower is better) Translates to: LEVMQSMSVDHVSFM*LIEDMAPCRYCSFK Trigger: TTTAAAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGCTCTGCATCACTTCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR CCA 90 bp | GCATGTCTGTGGACCATGTATCCTTTATGTGACTCATTGAAGACATaGCACCATGTAGATATTGTTCCTTTAAAAGATAAGGTGTTAAAT | + |
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Preference number: 1 (lower is better) Translates to: ACLWTMYPLCDSLKT*HHVDIVPLKDKVLN Trigger: ATTTAACACCTTATCTTTTAAAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTAAGCAAGAGTCCATACTCCAGCCTCAGCTCAGGCTCTCCATCCGAAAATAAGCTGGCCAGGGAGTaGGCAGGGGGTGAAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: SVSKSPYSSLSSGSPSENKLARE*AGGEGT Trigger: TGTACCTTCACCCCCTGCTCACTCCCTGGCCAGCTT...ATTTTCGGATGGAGAGCCTGAGCTGAGGCTGGAGTATGGACTCTTGCTTACTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGACAGGAAGCTAGTTTCATCACGCCGAGGGAGACGGCAGCAGGCTGCGAGCATCTCAAGAAACAACTaGTTGCTTGTGTCATTAGGC | + |
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Preference number: 2 (lower is better) Translates to: PDRKLVSSRRGRRQQAASISRNN*LLVSLG Trigger: GCCTAATGACACAAGCAAGCAGTTGTTTCTTGAGAT...GCTCGCAGCCTGCTGCCGTCTCCCTCGGCGTGATGAAACTAGCTTCCTGTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCCCAGTCCTGCCGTCAACAGCAACATGGCTGAACAGTATTTTGGAGGAATAGAGACGGCAGCAGGCTaGGAGCTTTGCAAGGCATCA | + |
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Preference number: 2 (lower is better) Translates to: WPSPAVNSNMAEQYFGGIETAAG*ELCKAS Trigger: TGATGCCTTGCAAAGCTCGCAGCCTGCTGCCGTCTC...TATTCCTCCAAAATACTGTTCAGCCATGTTGCTGTTGACGGCAGGACTGGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGCAAGAGTCCATACTCCAGCCTCAGCTCAGGCTCTCCATCCGAAAATTAGGTCTTCTGCCTCTCTaGGCTGCCTACATGTCACCC | + |
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Preference number: 2 (lower is better) Translates to: SKQESILQPQLRLSIRKLGLLPL*AAYMSP Trigger: GGGTGACATGTAGGCAGCTCAGAGAGGCAGAAGACC...TAATTTTCGGATGGAGAGCCTGAGCTGAGGCTGGAGTATGGACTCTTGCTTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR CAA 90 bp | ACTGGCCCAGTCCTGCCGTCAACAGCAACATGGCTGAACAGTATTTaGGAGGAATATCTTGAGGGGAAGCAAAGCCATGCCACAAGACGT | + |
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Preference number: 2 (lower is better) Translates to: TGPVLPSTATWLNSI*EEYLEGKQSHATRR Trigger: ACGTCTTGTGGCATGGCTTTGCTTCCCCTCAAGATATTCCTCCAAAATACTGTTCAGCCATGTTGCTGTTGACGGCAGGACTGGGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGAAATCCTCAACAAAACTaGGTGTGTAAGAGTGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: CAAATKYHQGLLYSSVSRNPQQN*VCKSGG Trigger: GCCACCACTCTTACACACGCAGTTTTGTTGAGGATT...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| 3UTR-3UTR CCA 90 bp | GGGTTCCACTCCCTTGAAATGATGCAATATGATGAAATGGTCCAGGATACAGGACGTTCTTCCAGAGGTTaGCTGTGTGCTGGGGTGACG | + |
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Preference number: 2 (lower is better) Translates to: GFHSLEMMQYDEMVQDTGRSSRG*LCAGVT Trigger: CGTCACCCCAGCACACAGCCAACCTCTGGAAGAACG...TCCTGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGAGTGGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR-3UTR CCA 90 bp | GGTACATACACTGAGGATGGTTTCTCAGCCCCAAATGTGAATTTGGTGGATCTCCTAGGATGGCTGTTCTaGTCTTCTGCCTCTCTGAGC | + |
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Preference number: 2 (lower is better) Translates to: GTYTEDGFSAPNVNLVDLLGWLF*SSASLS Trigger: GCTCAGAGAGGCAGAAGACCAGAACAGCCATCCTAG...GAGATCCACCAAATTCACATTTGGGGCTGAGAAACCATCCTCAGTGTATGTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR-3UTR GCA 90 bp | CTCAGGTTGAGTCCGCAGGGAGACCCGATGAAGACTTTTAGTATGTCCATCACAGACTTGTGCAAGCTCTaGAGATGCAAGAAGATCTCT | + |
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Preference number: 2 (lower is better) Translates to: LRLSPQGDPMKTFSMSITDLCKL*RCKKIS Trigger: AGAGATCTTCTTGCATCTGCAGAGCTTGCACAAGTC...TGTGATGGACATACTAAAAGTCTTCATCGGGTCTCCCTGCGGACTCAACCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR-3UTR TCA 90 bp | GACTCATTGAAGACATGGCACCATGTAGATATTGTTCCTCAGATACTGCTGTTGAAGTCTAACATTCTCTaGGGGAAGACCATCCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: DSLKTWHHVDIVPQILLLKSNIL*GKTIQA Trigger: GGCTTGGATGGTCTTCCCTCAGAGAATGTTAGACTT...CAACAGCAGTATCTGAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTATGTGACTCATTGAAGACATGGCACCATGTAGATATTGTTCCTCAGATATTATCACGAACAGCATaGACACTGGCCAACTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: PLCDSLKTWHHVDIVPQILSRTA*TLANSS Trigger: ACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAA...TATCTGAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR GCA 72 bp | TCCAGAGGTTGGCTGTGTGCTGGGGTGACGGTAAAATaGAATGGGACAGACAGGATGTGCAGCTGCCACCAA | + |
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Preference number: 3 (lower is better) Translates to: SRGWLCAGVTVK*NGTDRMCSCHQ Trigger: TTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR GCA 72 bp | ATCACGCCGAGGGAGACGGCAGCAGGCTGCGAGCTTTaGAAGGCATCAAGTATCTCAAGAAACAACTGCTTG | + |
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Preference number: 3 (lower is better) Translates to: ITPRETAAGCEL*KASSISRNNCL Trigger: CAAGCAGTTGTTTCTTGAGATACTTGATGCCTTGCAAAGCTCGCAGCCTGCTGCCGTCTCCCTCGGCGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR CCA 72 bp | GTTCCTCAGCGCCCTTATCACGAACAGCATGGACACTaGCCAACTCCAGTGCAAGGAGCAACAAAATCAGGG | + |
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Preference number: 3 (lower is better) Translates to: VPQRPYHEQHGH*PTPVQGATKSG Trigger: CCCTGATTTTGTTGCTCCTTGCACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAAGGGCGCTGAGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR CCA 72 bp | TGCTGTTGTTCCTCAGCGCCCTTATCACGAACAGCATaGACACTGGCCAACTCCAGTGCAAGGAGCAACAAA | + |
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Preference number: 3 (lower is better) Translates to: CCCSSAPLSRTA*TLANSSARSNK Trigger: TTTGTTGCTCCTTGCACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAAGGGCGCTGAGGAACAACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR-3UTR CAA 90 bp | GCATGTCTGTGGACCATGTATCCTTTATGTGACTCATTGAAGACATGGCACCATACGTTCTTCCAGAGGTaGGCTGTGTGCTGGGGTGAC | + |
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Preference number: 3 (lower is better) Translates to: ACLWTMYPLCDSLKTWHHTFFQR*AVCWGD Trigger: GTCACCCCAGCACACAGCCAACCTCTGGAAGAACGT...ATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR GCA 72 bp | CTTATCACGAACAGCATGGACACTGGCCAACTCCAGTaGAAGGAGCAACAAAATCAGGGAAAGCATGGGACA | + |
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Preference number: 3 (lower is better) Translates to: LITNSMDTGQLQ*KEQQNQGKHGT Trigger: TGTCCCATGCTTTCCCTGATTTTGTTGCTCCTTGCACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR GCA 72 bp | ATCTCTGGTACAACTAGGATGGCTGTTCTGGTCTTCTaGCTCTCTGAGCTGCCTACATGTCACCCTTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: ISGTTRMAVLVF*LSELPTCHPLV Trigger: AACTAAAGGGTGACATGTAGGCAGCTCAGAGAGGCAGAAGACCAGAACAGCCATCCTAGTTGTACCAGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR-3UTR CAA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTaGTTCTTCTCTCGGCTGGTG | + |
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Preference number: 3 (lower is better) Translates to: CFFSLKVQILNKTACVRVVASLH*FFSRLV Trigger: CACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCAC...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| 3UTR-3UTR CAA 90 bp | GGACCTTGTGTTGCTGATGTGACACACAAGGACAGGTCATTATGCATGAGAGCCCCTTTATGTGACTCATaGAAGACATGGCACCATGTA | + |
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Preference number: 3 (lower is better) Translates to: GPCVADVTHKDRSLCMRAPLCDS*KTWHHV Trigger: TACATGGTGCCATGTCTTCAATGAGTCACATAAAGG...GGCTCTCATGCATAATGACCTGTCCTTGTGTGTCACATCAGCAACACAAGGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000227252.2 ENSMUST00000228803.2 |
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| 3UTR CCA 72 bp | TGTATTTTTACGTTCTTCCAGAGGTTGGCTGTGTGCTaGGGTGACGGTAAAATGCAATGGGACAGACAGGAT | + |
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Preference number: 3 (lower is better) Translates to: CIFTFFQRLAVC*GDGKMQWDRQD Trigger: ATCCTGTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGGAAGAACGTAAAAATACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| 3UTR CCA 72 bp | AAATGTGAATTTGGTGGATCTCTGGTACAACTAGGATaGCTGTTCTGGTCTTCTGCCTCTCTGAGCTGCCTA | + |
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Preference number: 3 (lower is better) Translates to: KCEFGGSLVQLG*LFWSSASLSCL Trigger: TAGGCAGCTCAGAGAGGCAGAAGACCAGAACAGCCATCCTAGTTGTACCAGAGATCCACCAAATTCACATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR TCA 72 bp | GTACATACACTGAGGATGGTTTCTCAGCCCCAAATGTaGATTTGGTGGATCTCTGGTACAACTAGGATGGCT | + |
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Preference number: 3 (lower is better) Translates to: VHTLRMVSQPQM*IWWISGTTRMA Trigger: AGCCATCCTAGTTGTACCAGAGATCCACCAAATTCACATTTGGGGCTGAGAAACCATCCTCAGTGTATGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| 3UTR TCA 72 bp | AAAGCAGATTCAGAGGTGGGTTCCACTCCCTTGAAATaGTGCAATATGATGAAATGGTCCAGGATACAGGAC | + |
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Preference number: 3 (lower is better) Translates to: KADSEVGSTPLK*CNMMKWSRIQD Trigger: GTCCTGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGAGTGGAACCCACCTCTGAATCTGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227252.2 ENSMUST00000228803.2 |
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| 3UTR TCA 72 bp | ATGCAGAGCATGTCTGTGGACCATGTATCCTTTATGTaGCTCATTGAAGACATGGCACCATGTAGATATTGT | + |
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Preference number: 3 (lower is better) Translates to: MQSMSVDHVSFM*LIEDMAPCRYC Trigger: ACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGCTCTGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227252.2 ENSMUST00000228803.2 |
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| 3UTR CCA 72 bp | TGGACCATGTATCCTTTATGTGACTCATTGAAGACATaGCACCATGTAGATATTGTTCCTCAGATACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: WTMYPLCDSLKT*HHVDIVPQILL Trigger: CAGCAGTATCTGAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| 3UTR CCA 72 bp | GGCTGGATTTTATGGTTATTCTATCATAATCAAATCTaGAGAGAGAAACCCTGTGGGATATGTGGGAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: GWILWLFYHNQI*REKPCGICGRE Trigger: CTCTCTCCCACATATCCCACAGGGTTTCTCTCTCCAGATTTGATTATGATAGAATAACCATAAAATCCAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
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| 3UTR-3UTR CAA 90 bp | GCCACTGTAAGTCTGAATGGCTGCAAAAAGCATAAATTCCTACCTGTTAAAAACCAGAGTACTTTAGCTTaGGAAGATCAAAAGCACAGC | + |
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Preference number: 3 (lower is better) Translates to: ATVSLNGCKKHKFLPVKNQSTLA*EDQKHS Trigger: GCTGTGCTTTTGATCTTCCAAAGCTAAAGTACTCTG...GTTTTTAACAGGTAGGAATTTATGCTTTTTGCAGCCATTCAGACTTACAGTGGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
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| 3UTR TCA 72 bp | CTCCTCTATAGCTCAGTGTCACGACCAAAAATACCTTaGTTCGTGATTTCTTTGTCAGCTTATGTCAACTTT | + |
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Preference number: 3 (lower is better) Translates to: LLYSSVSRPKIP*FVISLSAYVNF Trigger: AAAGTTGACATAAGCTGACAAAGAAATCACGAATCAAGGTATTTTTGGTCGTGACACTGAGCTATAGAGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| 3UTR GCA 72 bp | ACACACACACATTATGCCACTGTAAGTCTGAATGGCTaGAAAAAGCATAAATTCCTACCTGTTAAAAACAGA | + |
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Preference number: 3 (lower is better) Translates to: THTHYATVSLNG*KKHKFLPVKNR Trigger: TCTGTTTTTAACAGGTAGGAATTTATGCTTTTTGCAGCCATTCAGACTTACAGTGGCATAATGTGTGTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
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| 3UTR CCA 72 bp | TGGACCATGTATCCTTTATGTGACTCATTGAAGACATaGCACCATGTAGATATTGTTCCTTTAAAAGATAAG | + |
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Preference number: 3 (lower is better) Translates to: WTMYPLCDSLKT*HHVDIVPLKDK Trigger: CTTATCTTTTAAAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS-3UTR TCA 90 bp | ATGCAATGGGACAGACAGGATGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCCTGGGACCACTTCTCTaGGGGAAGACCATCCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: MQWDRQDVQLPPSTTKVSLGPLL*GKTIQA Trigger: GGCTTGGATGGTCTTCCCTCAGAGAAGTGGTCCCAG...GGAGACCTTGGTGGTACTTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS-3UTR CCA 90 bp | ATGCAATGGGACAGACAGGATGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCAGCTGGAAGGCTGGGTaGCAGCGAGACCTGTATCCT | + |
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Preference number: 4 (lower is better) Translates to: MQWDRQDVQLPPSTTKVSSWKAG*QRDLYP Trigger: AGGATACAGGTCTCGCTGCCACCCAGCCTTCCAGCT...GGAGACCTTGGTGGTACTTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS-3UTR TCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCGCACCAGGGAGAATGTaGGCAGCTGGCCTGCGGCCT | + |
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Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLAPGRM*AAGLRP Trigger: AGGCCGCAGGCCAGCTGCTCACATTCTCCCTGGTGC...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR TCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGAGCACAGGCCACATCCTaGGGCTTCTCTCACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CAAATKYHQGLLYSSVSRAQATS*GFSHSS Trigger: TGAGCTGTGAGAGAAGCCTCAGGATGTGGCCTGTGC...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGAGAGACGGCAGCAGGCTaGGAGCTTTGCAAGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CAAATKYHQGLLYSSVSRETAAG*ELCKAS Trigger: TGATGCCTTGCAAAGCTCGCAGCCTGCTGCCGTCTC...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR TCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGACTCAGCACCTGTTTTTaGAGCTGGAAGGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CAAATKYHQGLLYSSVSRLSTCF*SWKAGW Trigger: CCACCCAGCCTTCCAGCTTCAAAAACAGGTGCTGAG...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGATGTGAGCAGCTGGCCTaGGGCCTCTTCTGGAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: CAAATKYHQGLLYSSVSRCEQLA*GLFWKF Trigger: GAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACA...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| 3UTR CAA 72 bp | CATCACGCCGAGGGAGACGGCAGCAGGCTGCGAGCTTaGCAAGGCATCAAGTATCTCAAGAAACAACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HHAEGDGSRLRA*QGIKYLKKQLL Trigger: AAGCAGTTGTTTCTTGAGATACTTGATGCCTTGCAAAGCTCGCAGCCTGCTGCCGTCTCCCTCGGCGTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| 3UTR CAA 72 bp | GGGGAAGCAAAGCCATGCCACAAGACGTTTCTCAGGTaGAGTCCGCAGGGAGACCCGATGAAGACTTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GEAKPCHKTFLR*SPQGDPMKTFS Trigger: ACTAAAAGTCTTCATCGGGTCTCCCTGCGGACTCAACCTGAGAAACGTCTTGTGGCATGGCTTTGCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
||
| CDS-3UTR TCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCCTGGGACCACTTCTCTaGGGGAAGACCATCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLLGPLL*GKTIQA Trigger: GGCTTGGATGGTCTTCCCTCAGAGAAGTGGTCCCAG...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR TCA 90 bp | AACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTGGTCGCAGGGAGACCCGATaGAGACTTTTAGTATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NCVCKSGGFTPLVLLSAGRRETR*RLLVCP Trigger: TGGACATACTAAAAGTCTTCATCGGGTCTCCCTGCG...ACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | AACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTGGTAGTGTACTCAGATACTaGTGTTGTTCCTCAGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NCVCKSGGFTPLVLLSAGSVLRY*CCSSAP Trigger: GGGCGCTGAGGAACAACAGCAGTATCTGAGTACACT...ACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR TCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTGCTACACAGTTCACTaGGCAGCTGGGACCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLCYTVH*AAGTTS Trigger: AGAAGTGGTCCCAGCTGCTCAGTGAACTGTGTAGCA...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGAAGGACACTTGTTAACTaGAGCAAACAGTCTCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CAAATKYHQGLLYSSVSRRTLVN*SKQSPE Trigger: CTCAGGAGACTGTTTGCTGCAGTTAACAAGTGTCCT...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTAGCTGGAAGGCTGGGTaGCAGCGAGACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLSWKAG*QRDLYP Trigger: AGGATACAGGTCTCGCTGCCACCCAGCCTTCCAGCT...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | GGGTTCCACTCCCTTGAAATGATGCAATATGATGAAATGGTCCAGGATACAGGAAGCTGGAAGGCTGGGTaGCAGCGAGACCTGTATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GFHSLEMMQYDEMVQDTGSWKAG*QRDLYP Trigger: AGGATACAGGTCTCGCTGCCACCCAGCCTTCCAGCT...TCCTGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGAGTGGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000227252.2 ENSMUST00000228803.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGGTTCCACTCCCTTGAAATGATGCAATATGATGAAATGGTCCAGGATACACTCAGCACCTGTTTTTaGAGCTGGAAGGCTGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GGFHSLEMMQYDEMVQDTLSTCF*SWKAGW Trigger: CCACCCAGCCTTCCAGCTTCAAAAACAGGTGCTGAG...TGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGAGTGGAACCCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR TCA 90 bp | CAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGTTTGGAGGAATATCTTaGGGGGAAGCAAAGCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: QQNCVCKSGGFTPLVLLSFGGIS*GEAKPC Trigger: GCATGGCTTTGCTTCCCCTCAAGATATTCCTCCAAA...CGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR TCA 90 bp | AACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCAAACCTGTGCGACTTaGACTTGCTCACTGCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: NKTACVRVVASLHLFFSRQTCAT*TCSLPF Trigger: AAATGGCAGTGAGCAAGTTCAAGTCGCACAGGTTTG...CCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR TCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCAATCTGCCTGCTTCCTaGCAACACTCTTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLNLPAS*QHSSGK Trigger: TTTGCCAGAAGAGTGTTGTCAGGAAGCAGGCAGATT...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTGGGGAAGCAAAGCCATaGCACAAGACGTTTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLGEAKP*HKTFLR Trigger: CCTGAGAAACGTCTTGTGGCATGGCTTTGCTTCCCC...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTACAGCAACAACATGGTaGAGTCGGCAAACCTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLTATTW*SRQTCA Trigger: CGCACAGGTTTGCCGACTGCACCATGTTGTTGCTGT...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR GCA 90 bp | ACGGTAAAATGCAATGGGACAGACAGGATGTGCAGCTGCCACCAAGTACCACCAAATTTCCTTCCAATCTaGCTGCTTCCTGACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: TVKCNGTDRMCSCHQVPPNFLPI*LLPDNT Trigger: AGTGTTGTCAGGAAGCAGGCAGATTGGAAGGAAATT...TGGTGGTACTTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCATTTTACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | AACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTGGTAGAGTTGCAGGCACATaGTTCAGAATTTCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NCVCKSGGFTPLVLLSAGRVAGT*FRISFQ Trigger: TTGGAAGGAAATTCTGAAGCATGTGCCTGCAACTCT...ACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTAGTTCACTGAGCAGCTaGGACCACTTCTCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLSSLSS*DHFSEG Trigger: TCCCTCAGAGAAGTGGTCCCAGCTGCTCAGTGAACT...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR CCA 90 bp | TGCAGAGCATGTCTGTGGACCATGTATCCTTTATGTGACTCATTGAAGACATGGAGTTCACTGAGCAGCTaGGACCACTTCTCTGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRACLWTMYPLCDSLKTWSSLSS*DHFSEG Trigger: TCCCTCAGAGAAGTGGTCCCAGCTGCTCAGTGAACT...CCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGCTCTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR TCA 90 bp | ACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTGGTGCCCAATATGGCAACATaGTTTTTAATAGGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TACVRVVASLHLFFSRLVPNMAT*FLIGSW Trigger: CCAACTTCCTATTAAAAATCATGTTGCCATATTGGG...CACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR GCA 90 bp | GAGTCCATACTCCAGCCTCAGCTCAGGCTCTCCATCCGAAAATTATTTTCAAGCGACTTGTGCAAGCTCTaGAGATGCAAGAAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ESILQPQLRLSIRKLFSSDLCKL*RCKKIS Trigger: AGAGATCTTCTTGCATCTGCAGAGCTTGCACAAGTC...GCTTGAAAATAATTTTCGGATGGAGAGCCTGAGCTGAGGCTGGAGTATGGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| CDS-3UTR GCA 90 bp | GGACCTTGTGTTGCTGATGTGACACACAAGGACAGGTCATTATGCATGAGAGCCAGAGTTGCAGGCACATaGTTCAGAATTTCCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GPCVADVTHKDRSLCMRARVAGT*FRISFQ Trigger: TTGGAAGGAAATTCTGAAGCATGTGCCTGCAACTCT...GGCTCTCATGCATAATGACCTGTCCTTGTGTGTCACATCAGCAACACAAGGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS-3UTR CCA 90 bp | GGGGGTGAAGGTACATACACTGAGGATGGTTTCTCAGCCCCAAATGTGAATTTGTTTCAAACTGAGCCCTaGTCAGAGCTGAGATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGEGTYTEDGFSAPNVNLFQTEP*SELRCV Trigger: TACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAA...CAAATTCACATTTGGGGCTGAGAAACCATCCTCAGTGTATGTACCTTCACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
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| CDS-3UTR CCA 90 bp | AACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTGGTCTCAAGAAACAACTCTaGATAAGTTGTCCACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: NCVCKSGGFTPLVLLSAGLKKQL*ISCPLV Trigger: TACCAGTGGACAACTTATCCAGAGTTGTTTCTTGAG...ACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR CCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCCCGTCAACAGCAACATaGCTGAACAGTATTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLPSTAT*LNSILE Trigger: CTCCAAAATACTGTTCAGCCATGTTGCTGTTGACGG...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR TCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCCAACAGCAACATGGCTaGACAGTATTTTGGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLQQQHG*TVFWRN Trigger: ATTCCTCCAAAATACTGTTCAGCCATGTTGCTGTTG...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR TCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGGTCGATGTGCCAAGGTaGCCTTTGTGTGGTGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVVDVPR*PLCGEG Trigger: ACCTTCACCACACAAAGGTCACCTTGGCACATCGAC...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR TCA 90 bp | ACGGTAAAATGCAATGGGACAGACAGGATGTGCAGCTGCCACCAAGTACCACCATTTGTTTCTTCTCACTaGAAGTCCAAATCCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TVKCNGTDRMCSCHQVPPFVSSH*KSKSST Trigger: TGTTGAGGATTTGGACTTTCAGTGAGAAGAAACAAA...TGGTGGTACTTGGTGGCAGCTGCACATCCTGTCTGTCCCATTGCATTTTACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGATTACAAATCAAGTCATaGACTAAAGGAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CAAATKYHQGLLYSSVSRLQIKS*TKGERH Trigger: ATGCCTTTCTCCTTTAGTGCATGACTTGATTTGTAA...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | ATCAAATCTGGAGAGAGAAACCCTGTGGGATATGTGGGAGAGAGACAATTCCAGGACTTGTGCAAGCTCTaGAGATGCAAGAAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKSGERNPVGYVGERQFQDLCKL*RCKKIS Trigger: AGAGATCTTCTTGCATCTGCAGAGCTTGCACAAGTC...CTGGAATTGTCTCTCTCCCACATATCCCACAGGGTTTCTCTCTCCAGATTTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
||
| CDS-3UTR GCA 90 bp | CAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGAATTTCCTTCCAATCTaGCTGCTTCCTGACAACACT | + |
|
Preference number: 4 (lower is better) Translates to: QQNCVCKSGGFTPLVLLSNFLPI*LLPDNT Trigger: AGTGTTGTCAGGAAGCAGGCAGATTGGAAGGAAATT...CGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | TGTCCATCACAGCATGTCCAAAGACTTGTGCAAGCTCTGCAGATGCAAGAAGATTTTCAAACTGAGCCCTaGTCAGAGCTGAGATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CPSQHVQRLVQALQMQEDFQTEP*SELRCV Trigger: TACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAA...ATCTTCTTGCATCTGCAGAGCTTGCACAAGTCTTTGGACATGCTGTGATGGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
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| CDS-3UTR TCA 90 bp | ACATGGCACCATGTAGATATTGTTCCTTTAAAAGATAAGGTGTTAAATCTGAGGGCACAGGCCACATCCTaGGGCTTCTCTCACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TWHHVDIVPLKDKVLNLRAQATS*GFSHSS Trigger: TGAGCTGTGAGAGAAGCCTCAGGATGTGGCCTGTGC...CCTCAGATTTAACACCTTATCTTTTAAAGGAACAATATCTACATGGTGCCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS-3UTR TCA 90 bp | GGTGTTAAATCTGAGGGAACAATTAAATCCCAAGTGATGAACCGCAACTTTGTATGCTACACAGTTCACTaGGCAGCTGGGACCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVKSEGTIKSQVMNRNFVCYTVH*AAGTTS Trigger: AGAAGTGGTCCCAGCTGCTCAGTGAACTGTGTAGCA...TACAAAGTTGCGGTTCATCACTTGGGATTTAATTGTTCCCTCAGATTTAACACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTAACCAGCAACTGTATTaGTGCTTCCTCCTTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLNQQLY*CFLLQF Trigger: GAACTGAAGGAGGAAGCAGCAATACAGTTGCTGGTT...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTCCATACTCCAGCCTCAGCTCAGGCTCTCCATCCGAAAATTATTTTCAAAAGGCATGTGGTCATaGAATCCCCTGGTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: QESILQPQLRLSIRKLFSKGMWS*NPLVKS Trigger: AGATTTTACCAGGGGATTCCATGACCACATGCCTTT...TGAAAATAATTTTCGGATGGAGAGCCTGAGCTGAGGCTGGAGTATGGACTCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCCCAAATGTGAATTTGGTGGATCTCTGGTACAACTAGGATGGCTGTTCCTCAAGAAACAACTCTaGATAAGTTGTCCACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSPKCEFGGSLVQLGWLFLKKQL*ISCPLV Trigger: TACCAGTGGACAACTTATCCAGAGTTGTTTCTTGAG...GAACAGCCATCCTAGTTGTACCAGAGATCCACCAAATTCACATTTGGGGCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGCCCACAAGAATTCCATaGCAGGCTCTCCAAGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVPTRIP*QALQGN Trigger: GTTTCCTTGGAGAGCCTGCCATGGAATTCTTGTGGG...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR TCA 90 bp | GAAATGATGCAATATGATGAAATGGTCCAGGATACAGGACCTTGTGTTGCTGATAATCTGCCTGCTTCCTaGCAACACTCTTCTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: EMMQYDEMVQDTGPCVADNLPAS*QHSSGK Trigger: TTTGCCAGAAGAGTGTTGTCAGGAAGCAGGCAGATT...ATCAGCAACACAAGGTCCTGTATCCTGGACCATTTCATCATATTGCATCATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTTGAACTTGCTCACTaGCATTTCCCAATATGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLLELAH*HFPIWQ Trigger: TTGCCATATTGGGAAATGGCAGTGAGCAAGTTCAAG...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | AATCCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTAAAGGCATGTGGTCATaGAATCCCCTGGTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: NPQQNCVCKSGGFTPLVLKGMWS*NPLVKS Trigger: AGATTTTACCAGGGGATTCCATGACCACATGCCTTT...AAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | ACAGCAACATGGCTGAACAGTATTTTGGAGGAATATCTTGAGGGGAAGCAAAGCAAAGGCATGTGGTCATaGAATCCCCTGGTAAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: TATWLNSILEEYLEGKQSKGMWS*NPLVKS Trigger: AGATTTTACCAGGGGATTCCATGACCACATGCCTTT...GCTTTGCTTCCCCTCAAGATATTCCTCCAAAATACTGTTCAGCCATGTTGCTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGAAGGAGAAAGGCATGTaGTCATGGAATCCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVKEKGM*SWNPLV Trigger: TACCAGGGGATTCCATGACCACATGCCTTTCTCCTT...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGTTATCACGAACAGCATaGACACTGGCCAACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVLSRTA*TLANSS Trigger: ACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAA...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGAAATGATGCAATATGATGAAATGGTCCAGGATACAGGACCTTGTGTTTTATCACGAACAGCATaGACACTGGCCAACTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLEMMQYDEMVQDTGPCVLSRTA*TLANSS Trigger: ACTGGAGTTGGCCAGTGTCCATGCTGTTCGTGATAA...AACACAAGGTCCTGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| 3UTR CAA 72 bp | GCATGTCTGTGGACCATGTATCCTTTATGTGACTCATaGAAGACATGGCACCATGTAGATATTGTTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ACLWTMYPLCDS*KTWHHVDIVPQ Trigger: CTGAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGGACTTGTGCAAGCTCTaGAGATGCAAGAAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVDLCKL*RCKKIS Trigger: AGAGATCTTCTTGCATCTGCAGAGCTTGCACAAGTC...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCATCACTCATGTGTTTTaGCAGTATTTCATCAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLITHVF*QYFIKR Trigger: ACGTTTGATGAAATACTGGCAAAACACATGAGTGAT...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGTTTCAAACTGAGCCCTaGTCAGAGCTGAGATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVFQTEP*SELRCV Trigger: TACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAA...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CCA 90 bp | TGTTTCTTCTCACTGAAAGTCCAAATCCTCAACAAAACTGCGTGTGTAAGAGTGATGTTGATCTCCCCATaGCTTATACGATCCCGGATA | + |
|
Preference number: 4 (lower is better) Translates to: CFFSLKVQILNKTACVRVMLISP*LIRSRI Trigger: TATCCGGGATCGTATAAGCCATGGGGAGATCAACAT...CACTCTTACACACGCAGTTTTGTTGAGGATTTGGACTTTCAGTGAGAAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR GCA 90 bp | TGGTTTCTCAGCCCCAAATGTGAATTTGGTGGATCTCTGGTACAACTAGGATGGTTACAAATCAAGTCATaGACTAAAGGAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: WFLSPKCEFGGSLVQLGWLQIKS*TKGERH Trigger: ATGCCTTTCTCCTTTAGTGCATGACTTGATTTGTAA...CCATCCTAGTTGTACCAGAGATCCACCAAATTCACATTTGGGGCTGAGAAACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAACAACTGCTTGCTTGTGTCATTAGGCCAAAGATGAAAAAGACATCCTTAAAGGAGAAAGGCATGTaGTCATGGAATCCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KKQLLACVIRPKMKKTSLKEKGM*SWNPLV Trigger: TACCAGGGGATTCCATGACCACATGCCTTTCTCCTT...TAAGGATGTCTTTTTCATCTTTGGCCTAATGACACAAGCAAGCAGTTGTTTCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
||
| CDS-3UTR CCA 90 bp | ATAATCAAATCTGGAGAGAGAAACCCTGTGGGATATGTGGGAGAGAGACAATTCCTCAAGAAACAACTCTaGATAAGTTGTCCACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IIKSGERNPVGYVGERQFLKKQL*ISCPLV Trigger: TACCAGTGGACAACTTATCCAGAGTTGTTTCTTGAG...GAATTGTCTCTCTCCCACATATCCCACAGGGTTTCTCTCTCCAGATTTGATTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
||
| CDS-3UTR GCA 90 bp | TGCGAGCTTTGCAAGGCATCAAGTATCTCAAGAAACAACTGCTTGCTTGTGTCATTACAAATCAAGTCATaGACTAAAGGAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CELCKASSISRNNCLLVSLQIKS*TKGERH Trigger: ATGCCTTTCTCCTTTAGTGCATGACTTGATTTGTAA...TGACACAAGCAAGCAGTTGTTTCTTGAGATACTTGATGCCTTGCAAAGCTCGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226384.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGCTGGATTTTATGGTTATTCTATCATAATCAAATCTGGAGAGAGAAACCCTTTCAAACTGAGCCCTaGTCAGAGCTGAGATGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGWILWLFYHNQIWREKPFQTEP*SELRCV Trigger: TACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAA...GGGTTTCTCTCTCCAGATTTGATTATGATAGAATAACCATAAAATCCAGCCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
||
| 3UTR CAA 72 bp | GCATGTCTGTGGACCATGTATCCTTTATGTGACTCATaGAAGACATGGCACCATGTAGATATTGTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: ACLWTMYPLCDS*KTWHHVDIVPL Trigger: TAAAGGAACAATATCTACATGGTGCCATGTCTTCAATGAGTCACATAAAGGATACATGGTCCACAGACATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | TATCATAATCAAATCTGGAGAGAGAAACCCTGTGGGATATGTGGGAGAGAGACATTACAAATCAAGTCATaGACTAAAGGAGAAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YHNQIWREKPCGICGRETLQIKS*TKGERH Trigger: ATGCCTTTCTCCTTTAGTGCATGACTTGATTTGTAA...TGTCTCTCTCCCACATATCCCACAGGGTTTCTCTCTCCAGATTTGATTATGATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGCACCATGTAGATATTGTTCCTTTAAAAGATAAGGTGTTAAATCTGAGGAATCCTCAACAAAACTaGGTGTGTAAGAGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWHHVDIVPLKDKVLNLRNPQQN*VCKSGG Trigger: GCCACCACTCTTACACACGCAGTTTTGTTGAGGATT...CCTCAGATTTAACACCTTATCTTTTAAAGGAACAATATCTACATGGTGCCATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS-3UTR GCA 90 bp | GAGACAATTCCAGAAGGAAGAGAGACGAATACACTTAATCGGTTAAACGGTAAAGCTTTATGTAGAATTTaGACACTTACCACAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ETIPEGRETNTLNRLNGKALCRI*TLTTAC Trigger: ACATGCTGTGGTAAGTGTGCAAATTCTACATAAAGC...TTTACCGTTTAACCGATTAAGTGTATTCGTCTCTCTTCCTTCTGGAATTGTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
||
| CDS CCA 90 bp | CGCTCCACCCATTGCCTGTGTCTTAGCTGCAAAGAGGCGGTGACCTaGTCAGATACGCGTTGGCACTGGGAGTTGATGCCTCGGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: RSTHCLCLSCKEAVT*SDTRWHWELMPRST Trigger: TGTGCTCCGAGGCATCAACTCCCAGTGCCAACGCGTATCTGACCAGGTCACCGCCTCTTTGCAGCTAAGACACAGGCAATGGGTGGAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS GCA 90 bp | TGCCTTGAACGTAACCTACGCTCCACCCATTGCCTGTGTCTTAGCTaGAAAGAGGCGGTGACCTGGTCAGATACGCGTTGGCACTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CLERNLRSTHCLCLS*KEAVTWSDTRWHWE Trigger: CTCCCAGTGCCAACGCGTATCTGACCAGGTCACCGCCTCTTTGCAGCTAAGACACAGGCAATGGGTGGAGCGTAGGTTACGTTCAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS CCA 90 bp | CAGCAGCACCAGGGAGAATGTGAGCAGCTGGCCTGCGGCCTCTTCTaGAAATTCACGTATGTTGATCTCCCCATGGCTTATACGATCCCG | + |
|
Preference number: 5 (lower is better) Translates to: QQHQGECEQLACGLF*KFTYVDLPMAYTIP Trigger: CGGGATCGTATAAGCCATGGGGAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATTCTCCCTGGTGCTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS TCA 90 bp | CTTCCTGACAACACTCTTCTGGCAAAGGCGGCACAGGCCACATCCTaGGGCTTCTCTCACAGCTCAGCACCTGTTTTTGAAGCTGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPDNTLLAKAAQATS*GFSHSSAPVFEAGR Trigger: CCTTCCAGCTTCAAAAACAGGTGCTGAGCTGTGAGAGAAGCCTCAGGATGTGGCCTGTGCCGCCTTTGCCAGAAGAGTGTTGTCAGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS GCA 90 bp | AGTGAATCTGAGCAGCAGCACCAGGGAGAATGTGAGCAGCTGGCCTaGGGCCTCTTCTGGAAATTCACGTATGTTGATCTCCCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SESEQQHQGECEQLA*GLFWKFTYVDLPMA Trigger: AGCCATGGGGAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATTCTCCCTGGTGCTGCTGCTCAGATTCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS CCA 90 bp | GAATTTCAAACTGAGCCCTGGTCAGAGCTGAGATGTGTAGGTGGATaGCCTCACACACCGGACCCAGCTGCTGCACACTTCTCCTGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: EFQTEPWSELRCVGG*PHTPDPAAAHFSCS Trigger: ACTACAGGAGAAGTGTGCAGCAGCTGGGTCCGGTGTGTGAGGCCATCCACCTACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
||
| CDS CCA 90 bp | GAGGCTTCTCTCACAGCTCAGCACCTGTTTTTGAAGCTGGAAGGCTaGGTGGCAGCGAGACCTGTATCCTTCTGCAAGCCTAACCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: EASLTAQHLFLKLEG*VAARPVSFCKPNQQ Trigger: TTGCTGGTTAGGCTTGCAGAAGGATACAGGTCTCGCTGCCACCCAGCCTTCCAGCTTCAAAAACAGGTGCTGAGCTGTGAGAGAAGCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS-3UTR CAA 90 bp | TCTTCCAGAGGTTGGCTGTGTGCTGGGGTGACGGTAAAATGCAATGGGACAGACGTGGCTTCACTCCACTaGTTCTTCTCTCGGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRGWLCAGVTVKCNGTDVASLH*FFSRLV Trigger: CACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCAC...GTCTGTCCCATTGCATTTTACCGTCACCCCAGCACACAGCCAACCTCTGGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS TCA 90 bp | TTGCAGGCACATGCTTCAGAATTTCCTTCCAATCTGCCTGCTTCCTaGCAACACTCTTCTGGCAAAGGCGGCACAGGCCACATCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQAHASEFPSNLPAS*QHSSGKGGTGHILR Trigger: CCTCAGGATGTGGCCTGTGCCGCCTTTGCCAGAAGAGTGTTGTCAGGAAGCAGGCAGATTGGAAGGAAATTCTGAAGCATGTGCCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS TCA 90 bp | AATGCGTGTGCTACACAGTTCACTGAGCAGCTGGGACCACTTCTCTaGGGGAAGACCATCCAAGCCATTTATAGCACAGGCACTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NACATQFTEQLGPLL*GKTIQAIYSTGTPR Trigger: CCTGGGAGTGCCTGTGCTATAAATGGCTTGGATGGTCTTCCCTCAGAGAAGTGGTCCCAGCTGCTCAGTGAACTGTGTAGCACACGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS CCA 90 bp | TTCTCAGTGAATCTGAGCAGCAGCACCAGGGAGAATGTGAGCAGCTaGCCTGCGGCCTCTTCTGGAAATTCACGTATGTTGATCTCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVNLSSSTRENVSS*PAASSGNSRMLISP Trigger: TGGGGAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATTCTCCCTGGTGCTGCTGCTCAGATTCACTGAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS CCA 90 bp | CTGTGTCTTAGCTGCAAAGAGGCGGTGACCTGGTCAGATACGCGTTaGCACTGGGAGTTGATGCCTCGGAGCACAACTAGAACTTCTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LCLSCKEAVTWSDTR*HWELMPRSTTRTSR Trigger: TCTAGAAGTTCTAGTTGTGCTCCGAGGCATCAACTCCCAGTGCCAACGCGTATCTGACCAGGTCACCGCCTCTTTGCAGCTAAGACACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS TCA 90 bp | TGCAAGCCTAACCAGCAACTGTATTGCTGCTTCCTCCTTCAGTTCTaGCACTGTCCCCTTCTCAGTGAATCTGAGCAGCAGCACCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CKPNQQLYCCFLLQF*HCPLLSESEQQHQG Trigger: TCCCTGGTGCTGCTGCTCAGATTCACTGAGAAGGGGACAGTGTCAGAACTGAAGGAGGAAGCAGCAATACAGTTGCTGGTTAGGCTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS CCA 90 bp | TTGTCCACTGGTACCAAGGCGAATACTGAATTTCAAACTGAGCCCTaGTCAGAGCTGAGATGTGTAGGTGGATGGCCTCACACACCGGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSTGTKANTEFQTEP*SELRCVGGWPHTPD Trigger: GTCCGGTGTGTGAGGCCATCCACCTACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAATTCAGTATTCGCCTTGGTACCAGTGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
||
| CDS CCA 90 bp | CTTAGCTGCAAAGAGGCGGTGACCTGGTCAGATACGCGTTGGCACTaGGAGTTGATGCCTCGGAGCACAACTAGAACTTCTAGAACGATT | + |
|
Preference number: 5 (lower is better) Translates to: LSCKEAVTWSDTRWH*ELMPRSTTRTSRTI Trigger: AATCGTTCTAGAAGTTCTAGTTGTGCTCCGAGGCATCAACTCCCAGTGCCAACGCGTATCTGACCAGGTCACCGCCTCTTTGCAGCTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS-3UTR CAA 90 bp | GACTCAGTAAGCAAGAGTCCATACTCCAGCCTCAGCTCAGGCTCTCCATCCGAAACAACTCTGGATAAGTaGTCCACTGGTACCAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: DSVSKSPYSSLSSGSPSETTLDK*STGTKA Trigger: CGCCTTGGTACCAGTGGACAACTTATCCAGAGTTGT...TTCGGATGGAGAGCCTGAGCTGAGGCTGGAGTATGGACTCTTGCTTACTGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226599.2 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCGTTGGCACTGGGAGTaGATGCCTCGGAGCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: NKTACVRVVASLHLFFSRRWHWE*MPRSTT Trigger: AGTTGTGCTCCGAGGCATCAACTCCCAGTGCCAACG...CCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS GCA 90 bp | TTTTTGAAGCTGGAAGGCTGGGTGGCAGCGAGACCTGTATCCTTCTaGAAGCCTAACCAGCAACTGTATTGCTGCTTCCTCCTTCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLKLEGWVAARPVSF*KPNQQLYCCFLLQF Trigger: GAACTGAAGGAGGAAGCAGCAATACAGTTGCTGGTTAGGCTTGCAGAAGGATACAGGTCTCGCTGCCACCCAGCCTTCCAGCTTCAAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCGCTCAGCACCTGTTTTaGAAGCTGGAAGGCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLAQHLF*KLEGWV Trigger: CACCCAGCCTTCCAGCTTCAAAAACAGGTGCTGAGC...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | ACAGGACCTTGTGTTGCTGATGTGACACACAAGGACAGGTCATTATGCATGAGACGTTGGCACTGGGAGTaGATGCCTCGGAGCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: TGPCVADVTHKDRSLCMRRWHWE*MPRSTT Trigger: AGTTGTGCTCCGAGGCATCAACTCCCAGTGCCAACG...TCTCATGCATAATGACCTGTCCTTGTGTGTCACATCAGCAACACAAGGTCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
||
| CDS GCA 90 bp | GCTTCTAGCTGTGACAGCAACAACATGGTGCAGTCGGCAAACCTGTaGGACTTGAACTTGCTCACTGCCATTTCCCAATATGGCAACATG | + |
|
Preference number: 5 (lower is better) Translates to: ASSCDSNNMVQSANL*DLNLLTAISQYGNM Trigger: CATGTTGCCATATTGGGAAATGGCAGTGAGCAAGTTCAAGTCGCACAGGTTTGCCGACTGCACCATGTTGTTGCTGTCACAGCTAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS CCA 90 bp | CAGAACAGTGTAGGAATGCGTGTGCTACACAGTTCACTGAGCAGCTaGGACCACTTCTCTGAGGGAAGACCATCCAAGCCATTTATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QNSVGMRVLHSSLSS*DHFSEGRPSKPFIA Trigger: TGCTATAAATGGCTTGGATGGTCTTCCCTCAGAGAAGTGGTCCCAGCTGCTCAGTGAACTGTGTAGCACACGCATTCCTACACTGTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
||
| CDS-3UTR CAA 90 bp | CAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGACAACTCTGGATAAGTaGTCCACTGGTACCAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QQNCVCKSGGFTPLVLLSTTLDK*STGTKA Trigger: CGCCTTGGTACCAGTGGACAACTTATCCAGAGTTGT...CGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | CAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCAAACCTGTGCGACTaGAACTTGCTCACTGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: QQNCVCKSGGFTPLVLLSANLCD*NLLTAI Trigger: AATGGCAGTGAGCAAGTTCAAGTCGCACAGGTTTGC...CGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | TGTGCAGCTGCCACCAAGTACCACCAAGGTCTCCTCTATAGCTCAGTGTCACGAGGAAATTCACGTATGTaGATCTCCCCATGGCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: CAAATKYHQGLLYSSVSRGNSRM*ISPWLI Trigger: TATAAGCCATGGGGAGATCAACATACGTGAATTTCC...TCGTGACACTGAGCTATAGAGGAGACCTTGGTGGTACTTGGTGGCAGCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | ACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTGGTGTTGCTAATTAAAGAGTaGCAGGCACATGCTTCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TACVRVVASLHLFFSRLVLLIKE*QAHASE Trigger: TTCTGAAGCATGTGCCTGCAACTCTTTAATTAGCAA...CACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | CAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGTTTTGGAGGAATATCTaGAGGGGAAGCAAAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QQNCVCKSGGFTPLVLLSFWRNI*RGSKAM Trigger: CATGGCTTTGCTTCCCCTCAAGATATTCCTCCAAAA...CGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
||
| CDS-3UTR CAA 90 bp | AACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGTGGCTGAACAGTATTTaGGAGGAATATCTTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: NKTACVRVVASLHLFFSRWLNSI*EEYLEG Trigger: CCCCTCAAGATATTCCTCCAAAATACTGTTCAGCCA...CCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR CAA 90 bp | GGGTTCCACTCCCTTGAAATGATGCAATATGATGAAATGGTCCAGGATACAGGACCTTCCAATCTGTTTTaGAAGCTGGAAGGCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: GFHSLEMMQYDEMVQDTGPSNLF*KLEGWV Trigger: CACCCAGCCTTCCAGCTTCAAAAACAGATTGGAAGG...TCCTGTATCCTGGACCATTTCATCATATTGCATCATTTCAAGGGAGTGGAACCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000227252.2 |
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| CDS CCA 90 bp | TCCCACAAGAATTCCATGGCAGGCTCTCCAAGGAAACAAGGAAGCTaGTTCATGCTACCATCACTCATGTGTTTTGCCAGTATTTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SHKNSMAGSPRKQGS*FMLPSLMCFASISS Trigger: TGATGAAATACTGGCAAAACACATGAGTGATGGTAGCATGAACCAGCTTCCTTGTTTCCTTGGAGAGCCTGCCATGGAATTCTTGTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR CAA 90 bp | TATCATAATCAAATCTGGAGAGAGAAACCCTGTGGGATATGTGGGAGAGAGACAACAACTCTGGATAAGTaGTCCACTGGTACCAAGGCG | + |
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Preference number: 5 (lower is better) Translates to: YHNQIWREKPCGICGRETTTLDK*STGTKA Trigger: CGCCTTGGTACCAGTGGACAACTTATCCAGAGTTGT...TGTCTCTCTCCCACATATCCCACAGGGTTTCTCTCTCCAGATTTGATTATGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226561.2 |
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| CDS-3UTR CAA 90 bp | CCTCAACAAAACTGCGTGTGTAAGAGTGGTGGCTTCACTCCACTTGTTCTTCTCAGTCTATCAGGACACTaGTTAACTGCAGCAAACAGT | + |
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Preference number: 5 (lower is better) Translates to: PQQNCVCKSGGFTPLVLLSLSGH*LTAANS Trigger: ACTGTTTGCTGCAGTTAACAAGTGTCCTGATAGACT...GAGAAGAACAAGTGGAGTGAAGCCACCACTCTTACACACGCAGTTTTGTTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS-3UTR CAA 90 bp | ATTAAATCCCAAGTGATGAACCGCAACTTTGTATTTTTACGTTCTTCCAGAGGTGCTCAGCACCTGTTTTaGAAGCTGGAAGGCTGGGTG | + |
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Preference number: 5 (lower is better) Translates to: IKSQVMNRNFVFLRSSRGAQHLF*KLEGWV Trigger: CACCCAGCCTTCCAGCTTCAAAAACAGGTGCTGAGC...ACCTCTGGAAGAACGTAAAAATACAAAGTTGCGGTTCATCACTTGGGATTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS GCA 90 bp | TCACAAATTTCTTTGAGTTCAAACCCAAGGTTACAAATCAAGTCATaGACTAAAGGAGAAAGGCATGTGGTCATGGAATCCCCTGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: SQISLSSNPRLQIKS*TKGERHVVMESPGK Trigger: TTTACCAGGGGATTCCATGACCACATGCCTTTCTCCTTTAGTGCATGACTTGATTTGTAACCTTGGGTTTGAACTCAAAGAAATTTGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226599.2 |
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| CDS-3UTR CAA 90 bp | ACATGGCACCATGTAGATATTGTTCCTTTAAAAGATAAGGTGTTAAATCTGAGGTTGCTAATTAAAGAGTaGCAGGCACATGCTTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: TWHHVDIVPLKDKVLNLRLLIKE*QAHASE Trigger: TTCTGAAGCATGTGCCTGCAACTCTTTAATTAGCAA...CCTCAGATTTAACACCTTATCTTTTAAAGGAACAATATCTACATGGTGCCATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS CCA 72 bp | ACTGAGCCCTGGTCAGAGCTGAGATGTGTAGGTGGATaGCCTCACACACCGGACCCAGCTGCTGCACACTTC | + |
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Preference number: 6 (lower is better) Translates to: TEPWSELRCVGG*PHTPDPAAAHF Trigger: GAAGTGTGCAGCAGCTGGGTCCGGTGTGTGAGGCCATCCACCTACACATCTCAGCTCTGACCAGGGCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226561.2 ENSMUST00000226599.2 ENSMUST00000228518.2 |
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| CDS GCA 72 bp | CGTAACCTACGCTCCACCCATTGCCTGTGTCTTAGCTaGAAAGAGGCGGTGACCTGGTCAGATACGCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: RNLRSTHCLCLS*KEAVTWSDTRW Trigger: CCAACGCGTATCTGACCAGGTCACCGCCTCTTTGCAGCTAAGACACAGGCAATGGGTGGAGCGTAGGTTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS CCA 72 bp | AGCTGCAAAGAGGCGGTGACCTGGTCAGATACGCGTTaGCACTGGGAGTTGATGCCTCGGAGCACAACTAGA | + |
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Preference number: 6 (lower is better) Translates to: SCKEAVTWSDTR*HWELMPRSTTR Trigger: TCTAGTTGTGCTCCGAGGCATCAACTCCCAGTGCCAACGCGTATCTGACCAGGTCACCGCCTCTTTGCAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS GCA 72 bp | GAGCAGCAGCACCAGGGAGAATGTGAGCAGCTGGCCTaGGGCCTCTTCTGGAAATTCACGTATGTTGATCTC | + |
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Preference number: 6 (lower is better) Translates to: EQQHQGECEQLA*GLFWKFTYVDL Trigger: GAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATTCTCCCTGGTGCTGCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CCA 72 bp | CTCACAGCTCAGCACCTGTTTTTGAAGCTGGAAGGCTaGGTGGCAGCGAGACCTGTATCCTTCTGCAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LTAQHLFLKLEG*VAARPVSFCKP Trigger: AGGCTTGCAGAAGGATACAGGTCTCGCTGCCACCCAGCCTTCCAGCTTCAAAAACAGGTGCTGAGCTGTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS CCA 72 bp | TCCTTCCAATCTGCCTGCTTCCTGACAACACTCTTCTaGCAAAGGCGGCACAGGCCACATCCTGAGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SFQSACFLTTLF*QRRHRPHPEAS Trigger: AGAAGCCTCAGGATGTGGCCTGTGCCGCCTTTGCCAGAAGAGTGTTGTCAGGAAGCAGGCAGATTGGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS CAA 72 bp | CATCACGCCGAGGGAGACGGCAGCAGGCTGCGAGCTTaGCAAGGCATCAAGTATCTCAAGAAACAACTCTGG | + |
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Preference number: 6 (lower is better) Translates to: HHAEGDGSRLRA*QGIKYLKKQLW Trigger: CCAGAGTTGTTTCTTGAGATACTTGATGCCTTGCAAAGCTCGCAGCCTGCTGCCGTCTCCCTCGGCGTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
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| CDS CAA 90 bp | AATGTGAGCAGCTGGCCTGCGGCCTCTTCTGGAAATTCACGTATGTaGATCTCCCCATGGCTTATACGATCCCGGATACGAGGACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: NVSSWPAASSGNSRM*ISPWLIRSRIRGPS Trigger: GGAGGGTCCTCGTATCCGGGATCGTATAAGCCATGGGGAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS GCA 72 bp | ATCACGCCGAGGGAGACGGCAGCAGGCTGCGAGCTTTaGAAGGCATCAAGTATCTCAAGAAACAACTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ITPRETAAGCEL*KASSISRNNSG Trigger: TCCAGAGTTGTTTCTTGAGATACTTGATGCCTTGCAAAGCTCGCAGCCTGCTGCCGTCTCCCTCGGCGTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
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| CDS CCA 72 bp | AATCTGAGCAGCAGCACCAGGGAGAATGTGAGCAGCTaGCCTGCGGCCTCTTCTGGAAATTCACGTATGTTG | + |
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Preference number: 6 (lower is better) Translates to: NLSSSTRENVSS*PAASSGNSRML Trigger: CAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATTCTCCCTGGTGCTGCTGCTCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CCA 72 bp | GTAGGAATGCGTGTGCTACACAGTTCACTGAGCAGCTaGGACCACTTCTCTGAGGGAAGACCATCCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: VGMRVLHSSLSS*DHFSEGRPSKP Trigger: TGGCTTGGATGGTCTTCCCTCAGAGAAGTGGTCCCAGCTGCTCAGTGAACTGTGTAGCACACGCATTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS CCA 72 bp | AAAGAGGCGGTGACCTGGTCAGATACGCGTTGGCACTaGGAGTTGATGCCTCGGAGCACAACTAGAACTTCT | + |
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Preference number: 6 (lower is better) Translates to: KEAVTWSDTRWH*ELMPRSTTRTS Trigger: AGAAGTTCTAGTTGTGCTCCGAGGCATCAACTCCCAGTGCCAACGCGTATCTGACCAGGTCACCGCCTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS CCA 72 bp | CAGGGAGAATGTGAGCAGCTGGCCTGCGGCCTCTTCTaGAAATTCACGTATGTTGATCTCCCCATGGCTTAT | + |
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Preference number: 6 (lower is better) Translates to: QGECEQLACGLF*KFTYVDLPMAY Trigger: ATAAGCCATGGGGAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCTGCTCACATTCTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CCA 72 bp | GAGTGGTGGCTTCACTCCACTTGTTCTTCTCTCGGCTaGTGTAGGCCACTAGGTTCTCAGTGTACTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: EWWLHSTCSSLG*CRPLGSQCTVG Trigger: TCCTACAGTACACTGAGAACCTAGTGGCCTACACCAGCCGAGAGAAGAACAAGTGGAGTGAAGCCACCACTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228803.2 |
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| CDS CAA 72 bp | AGCTGGCCTGCGGCCTCTTCTGGAAATTCACGTATGTaGATCTCCCCATGGCTTATACGATCCCGGATACGA | + |
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Preference number: 6 (lower is better) Translates to: SWPAASSGNSRM*ISPWLIRSRIR Trigger: TCGTATCCGGGATCGTATAAGCCATGGGGAGATCAACATACGTGAATTTCCAGAAGAGGCCGCAGGCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CCA 72 bp | GGTACCAAGGCGAATACTGAATTTCAAACTGAGCCCTaGTCAGAGCTGAGATGTGTAGGTGGATGGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: GTKANTEFQTEP*SELRCVGGWPH Trigger: GTGAGGCCATCCACCTACACATCTCAGCTCTGACCAGGGCTCAGTTTGAAATTCAGTATTCGCCTTGGTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
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| CDS GCA 72 bp | AGTTGCAGGCACATGCTTCAGAATTTCCTTCCAATCTaGCTGCTTCCTGACAACACTCTTCTGGCAAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: SCRHMLQNFLPI*LLPDNTLLAKA Trigger: CGCCTTTGCCAGAAGAGTGTTGTCAGGAAGCAGGCAGATTGGAAGGAAATTCTGAAGCATGTGCCTGCAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097393.11 ENSMUST00000228803.2 |
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| CDS GCA 72 bp | TGTGACAGCAACAACATGGTGCAGTCGGCAAACCTGTaGGACTTGAACTTGCTCACTGCCATTTCCCAATAT | + |
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Preference number: 6 (lower is better) Translates to: CDSNNMVQSANL*DLNLLTAISQY Trigger: ATATTGGGAAATGGCAGTGAGCAAGTTCAAGTCGCACAGGTTTGCCGACTGCACCATGTTGTTGCTGTCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CAA 72 bp | ATTGTTGACTCGGCTGTGAGCAGTCTATCAGGACACTaGTTAACTGCAGCAAACAGTCTCCTGAGTCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: IVDSAVSSLSGH*LTAANSLLSPA Trigger: AGCTGGACTCAGGAGACTGTTTGCTGCAGTTAACAAGTGTCCTGATAGACTGCTCACAGCCGAGTCAACAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CAA 72 bp | AACATGGTGCAGTCGGCAAACCTGTGCGACTTGAACTaGCTCACTGCCATTTCCCAATATGGCAACATGATT | + |
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Preference number: 6 (lower is better) Translates to: NMVQSANLCDLN*LTAISQYGNMI Trigger: AATCATGTTGCCATATTGGGAAATGGCAGTGAGCAAGTTCAAGTCGCACAGGTTTGCCGACTGCACCATGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CAA 90 bp | GACAGCAACAACATGGTGCAGTCGGCAAACCTGTGCGACTTGAACTaGCTCACTGCCATTTCCCAATATGGCAACATGATTTTTAATAGG | + |
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Preference number: 6 (lower is better) Translates to: DSNNMVQSANLCDLN*LTAISQYGNMIFNR Trigger: CCTATTAAAAATCATGTTGCCATATTGGGAAATGGCAGTGAGCAAGTTCAAGTCGCACAGGTTTGCCGACTGCACCATGTTGTTGCTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CAA 90 bp | AGCTTTGCAAGGCATCAAGTATCTCAAGAAACAACTCTGGATAAGTaGTCCACTGGTACCAAGGCGAATACTGAATTTCAAACTGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: SFARHQVSQETTLDK*STGTKANTEFQTEP Trigger: GGGCTCAGTTTGAAATTCAGTATTCGCCTTGGTACCAGTGGACAACTTATCCAGAGTTGTTTCTTGAGATACTTGATGCCTTGCAAAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
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| CDS GCA 72 bp | TCTTTGAGTTCAAACCCAAGGTTACAAATCAAGTCATaGACTAAAGGAGAAAGGCATGTGGTCATGGAATCC | + |
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Preference number: 6 (lower is better) Translates to: SLSSNPRLQIKS*TKGERHVVMES Trigger: GGATTCCATGACCACATGCCTTTCTCCTTTAGTGCATGACTTGATTTGTAACCTTGGGTTTGAACTCAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226599.2 |
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| CDS GCA 72 bp | AGGAAGCTGGTTCATGCTACCATCACTCATGTGTTTTaGCAGTATTTCATCAAACGTGGTATACAGAATTGT | + |
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Preference number: 6 (lower is better) Translates to: RKLVHATITHVF*QYFIKRGIQNC Trigger: ACAATTCTGTATACCACGTTTGATGAAATACTGGCAAAACACATGAGTGATGGTAGCATGAACCAGCTTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS CAA 72 bp | AGGCATCAAGTATCTCAAGAAACAACTCTGGATAAGTaGTCCACTGGTACCAAGGCGAATACTGAATTTCAA | + |
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Preference number: 6 (lower is better) Translates to: RHQVSQETTLDK*STGTKANTEFQ Trigger: TTGAAATTCAGTATTCGCCTTGGTACCAGTGGACAACTTATCCAGAGTTGTTTCTTGAGATACTTGATGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226561.2 ENSMUST00000226599.2 |
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| CDS CAA 72 bp | AAGGAAGCTGGTTCATGCTACCATCACTCATGTGTTTaGCCAGTATTTCATCAAACGTGGTATACAGAATTG | + |
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Preference number: 6 (lower is better) Translates to: KEAGSCYHHSCV*PVFHQTWYTEL Trigger: CAATTCTGTATACCACGTTTGATGAAATACTGGCAAAACACATGAGTGATGGTAGCATGAACCAGCTTCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000097393.11 |
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| CDS TCA 72 bp | CGGTCAGTAATTGCTTTCCATCGTACTTCACCATTTTaGGTTACAATGCTATTGATATCACAAATTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RSVIAFHRTSPF*VTMLLISQISL Trigger: CAAAGAAATTTGTGATATCAATAGCATTGTAACTCAAAATGGTGAAGTACGATGGAAAGCAATTACTGACCG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000097393.11 ENSMUST00000226213.2 ENSMUST00000226384.2 ENSMUST00000226561.2 ENSMUST00000226599.2 ENSMUST00000228518.2 |
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