Pregenerated sensors for ERMAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028644Ensembl transcript IDs: ENSMUST00000030396.15, ENSMUST00000124626.9, ENSMUST00000133956.8, ENSMUST00000138395.9, ENSMUST00000141227.9, ENSMUST00000239029.2
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGAGATGAGGTACTGGAGAAACAGATGCTGGGCCAGGAGCCTGTaGCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCACAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: KEMRYWRNRCWARSL*QAGCSREWSTGHSP Trigger: AGGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTACCTCATCTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR CCA 90 bp | GAGAAGCTGGTGCCAAGGTTCCCTCAGGGAGAGAGCCCTTTCCCCTaGCCTGAACGGAGTCCCCCTGCATTACATCCAAGGTCTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: EKLVPRFPQGESPFP*PERSPPALHPRSPP Trigger: AGGAGGAGACCTTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCTGAGGGAACCTTGGCACCAGCTTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR TCA 90 bp | CACGGCTCTGTCGCACAAGCCAGTGGCCATTGGCAGGCGAGGCCGTaGCCTTCCCTTTCCTGCTCACAGACTCACTACACACTCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: HGSVAQASGHWQARP*PSLSCSQTHYTLQE Trigger: TTCTTGGAGTGTGTAGTGAGTCTGTGAGCAGGAAAGGGAAGGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACAGAGCCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR GCA 90 bp | TACTGGAGAAACAGATGCTGGGCCAGGAGCCTGTGCCAGGCCGGATaGTCACGAGAGTGGAGCACAGGGCACAGCCCTACAAAGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: YWRNRCWARSLCQAG*SREWSTGHSPTKKE Trigger: TTCCTTCTTTGTAGGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR CCA 90 bp | AGAAACCACAGAAGGCTCTGGACTGGGGTCAAGGAGATGAGGTACTaGAGAAACAGATGCTGGGCCAGGAGCCTGTGCCAGGCCGGATGC | + |
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Preference number: 1 (lower is better) Translates to: RNHRRLWTGVKEMRY*RNRCWARSLCQAGC Trigger: GCATCCGGCCTGGCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | AATCCCCACACACTTCGGGGACTCTTTGAGGCGGAAGGAGGTCTGTaGGGACGTGAGAGCTTCATACTCATTCCCACGGCTCTGTCGCAC | + |
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Preference number: 1 (lower is better) Translates to: NPHTLRGLFEAEGGL*GRESFILIPTALSH Trigger: GTGCGACAGAGCCGTGGGAATGAGTATGAAGCTCTCACGTCCCCACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGTGTGTGGGGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR CCA 90 bp | AGCCCTGGGAGAAAAGCAGAAGAGAAACCACAGAAGGCTCTGGACTaGGGTCAAGGAGATGAGGTACTGGAGAAACAGATGCTGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SPGRKAEEKPQKALD*GQGDEVLEKQMLGQ Trigger: CTGGCCCAGCATCTGTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR GCA 90 bp | AAGGGCCATAGCCACAGACTGCAGAGTAACTCATCTGCTCAGGGCTaGACAGCTGGATTGCTTTGGTTACAGCTGTTCCTACCAGCCTGT | + |
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Preference number: 1 (lower is better) Translates to: KGHSHRLQSNSSAQG*TAGLLWLQLFLPAC Trigger: ACAGGCTGGTAGGAACAGCTGTAACCAAAGCAATCCAGCTGTGCAGCCCTGAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | AACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAGAAGGCTCTaGACTGGGGTCAAGGAGATGAGGTACTGGAGAAACAGATGCTGG | + |
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Preference number: 1 (lower is better) Translates to: NRALGEKQKRNHRRL*TGVKEMRYWRNRCW Trigger: CCAGCATCTGTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | CAATGGGGATGTCTCAAGAACAAGGCAGAGTTCAGAACCGAGCCCTaGGAGAAAAGCAGAAGAGAAACCACAGAAGGCTCTGGACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: QWGCLKNKAEFRTEP*EKSRRETTEGSGLG Trigger: CCCCAGTCCAGAGCCTTCTGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTTCTTGAGACATCCCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | CTGCAGAGTAACTCATCTGCTCAGGGCTGCACAGCTGGATTGCTTTaGTTACAGCTGTTCCTACCAGCCTGTGTTCAGGTTTCTTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LQSNSSAQGCTAGLL*LQLFLPACVQVSWD Trigger: ATCCCAAGAAACCTGAACACAGGCTGGTAGGAACAGCTGTAACCAAAGCAATCCAGCTGTGCAGCCCTGAGCAGATGAGTTACTCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | GTTTTTCCCCTCATCGTGAAGACAAGGTTCAAAGAAAGGGCGAAGTaGGCTCGAGAAACTGTGGGTGAAAGTGAAGATGTGGGACTTATC | + |
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Preference number: 1 (lower is better) Translates to: VFPLIVKTRFKERAK*ARETVGESEDVGLI Trigger: GATAAGTCCCACATCTTCACTTTCACCCACAGTTTCTCGAGCCCACTTCGCCCTTTCTTTGAACCTTGTCTTCACGATGAGGGGAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR GCA 90 bp | AATCACCAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTaGATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: NHQSKKTQGGTRVSS*ICSRGWPSWSSMGG Trigger: TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR GCA 90 bp | TTGAAGTCTCATCCTCTAGATATGGAATTACAGGTGGTTGTGAACTaGCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: LKSHPLDMELQVVVN*PIWVLEKQTQVLCK Trigger: CTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCAGTTCACAACCACCTGTAATTCCATATCTAGAGGATGAGACTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | CATCCTCTAGATATGGAATTACAGGTGGTTGTGAACTGCCCAATATaGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: HPLDMELQVVVNCPI*VLEKQTQVLCKIRM Trigger: CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCAGTTCACAACCACCTGTAATTCCATATCTAGAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR TCA 90 bp | ATTTACCCCTCCATCTCTAACCCTGAACAGAGAAGAAAGGATGTGTaGGTCTCAAGATACATACTTGTAAAAAGCTGGCGTGGCGAGTTA | + |
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Preference number: 1 (lower is better) Translates to: IYPSISNPEQRRKDV*VSRYILVKSWRGEL Trigger: TAACTCGCCACGCCAGCTTTTTACAAGTATGTATCTTGAGACTCACACATCCTTTCTTCTCTGTTCAGGGTTAGAGATGGAGGGGTAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR GCA 90 bp | TATTGGAAAGAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTaGCTTCCCATCTGCAAATCTGTAATTAATAACTCCACAAACAGG | + |
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Preference number: 1 (lower is better) Translates to: YWKEPVADLVPVESS*LPICKSVINNSTNR Trigger: CCTGTTTGTGGAGTTATTAATTACAGATTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTCTTTCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR GCA 90 bp | ACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAGTGCCTTaGCTTCTTTCCCCAATCCACATCCAAAACTTGGATTCATTATTT | + |
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Preference number: 1 (lower is better) Translates to: TNRPKHICGYDLKVP*LLSPIHIQNLDSLF Trigger: AAATAATGAATCCAAGTTTTGGATGTGGATTGGGGAAAGAAGGCAAGGCACTTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CCA 90 bp | TTGCTTTGGTTACAGCTGTTCCTACCAGCCTGTGTTCAGGTTTCTTaGGATTCTGGTTCCTGTCATGATGTAGGTAACTTAATTTTTGAA | + |
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Preference number: 1 (lower is better) Translates to: LLWLQLFLPACVQVS*DSGSCHDVGNLIFE Trigger: TTCAAAAATTAAGTTACCTACATCATGACAGGAACCAGAATCCCAAGAAACCTGAACACAGGCTGGTAGGAACAGCTGTAACCAAAGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR TCA 90 bp | TCCCTACCTTACACTGCAACTAAAACTTGTCTCTTTCTAGTACTCTaGCCTGCCAACTTCAGTCTCGTATTTATTTTCTGTCTCTATCTC | + |
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Preference number: 1 (lower is better) Translates to: SLPYTATKTCLFLVL*PANFSLVFIFCLYL Trigger: GAGATAGAGACAGAAAATAAATACGAGACTGAAGTTGGCAGGTCAGAGTACTAGAAAGAGACAAGTTTTAGTTGCAGTGTAAGGTAGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR TCA 90 bp | AATCTTCCAAATATGATATCTTATCTCATTTTGAGGACATGGCATTaGGACAAGGTTTCTCCACAAAGTCCTGGCTGTCCTAGAACTTAC | + |
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Preference number: 1 (lower is better) Translates to: NLPNMISYLILRTWH*DKVSPQSPGCPRTY Trigger: GTAAGTTCTAGGACAGCCAGGACTTTGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAAAATGAGATAAGATATCATATTTGGAAGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR CAA 90 bp | GCTTCATACTCATTCCCACGGCTCTGTCGCACAAGCCAGTGGCCATaGGCAGGCGAGGCCGTGACCTTCCCTTTCCTGCTCACAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: ASYSFPRLCRTSQWP*AGEAVTFPFLLTDS Trigger: TGAGTCTGTGAGCAGGAAAGGGAAGGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACAGAGCCGTGGGAATGAGTATGAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCATTTTTCCCCTCATCGTaGAGACAAGGTTCAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LGQEPVPGRMLTRVEHRAFFPSS*RQGSKK Trigger: TTTCTTTGAACCTTGTCTTCACGATGAGGGGAAAAA...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCACAGCCCTACAAAGACAATCGATTCCTCTaGTTTCTGAAGCTCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: PVPGRMLTRVEHRAQPYKDNRFL*FLKLST Trigger: TGTACTGAGCTTCAGAAATCAGAGGAATCGATTGTC...TTTGTAGGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR CCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGGATGCTCACGAGAGTaGAGCACAGGGCACAGCCCT | + |
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Preference number: 2 (lower is better) Translates to: VSSCICSRGWPSWSSMGGGCSRE*STGHSP Trigger: AGGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCC...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAACTTCGGGGACTCTTTaGGGCGGAAGGAGGTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: NKAEFRTEPWEKSRRETTTSGTL*GGRRSV Trigger: CACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGT...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTGTGTCAGGGTCCCCAATGAAGGAGCCAGAGAAAAAGTACCCAAGGAGCAGTTGCAGGTGCCTTTaGAGGCTTGAAGTCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: ACVSGSPMKEPEKKYPRSSCRCL*RLEVSS Trigger: GGATGAGACTTCAAGCCTTCAAAGGCACCTGCAACT...GCTCCTTGGGTACTTTTTCTCTGGCTCCTTCATTGGGGACCCTGACACACAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAATACTGGAGAAACAGATaGTGGGCCAGGAGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: EPVADLVPVESSCLPICKYWRNR*WARSLC Trigger: GCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTA...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAAGCGGAAGGAGGTCTGTaGGGACGTGAGAGCTTCATA | + |
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Preference number: 2 (lower is better) Translates to: EPVADLVPVESSCLPICKAEGGL*GRESFI Trigger: TATGAAGCTCTCACGTCCCCACAGACCTCCTTCCGC...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGCCATAGCCACAGACTGCAGAGTAACTCATCTGCTCAGGGCTGCACAGAAAGAAAGGGCGAAGTaGGCTCGAGAAACTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: RRAIATDCRVTHLLRAAQKERAK*ARETVG Trigger: ACCCACAGTTTCTCGAGCCCACTTCGCCCTTTCTTT...CTGTGCAGCCCTGAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGCCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGGCCATAGCCACAGACTGCAGAGTAACTCATCTGCTCAGGGCTGCACAGAAGGAGATGAGGTACTaGAGAAACAGATGCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: RRAIATDCRVTHLLRAAQKEMRY*RNRCWA Trigger: GGCCCAGCATCTGTTTCTCCAGTACCTCATCTCCTT...CTGTGCAGCCCTGAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGCCCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAATGTCGCACAAGCCAGTaGCCATTGGCAGGCGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: LSGFRRISTLSLPYTATKCRTSQ*PLAGEA Trigger: GGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACA...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAACAGAAGGCTCTGGACTaGGGTCAAGGAGATGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: EPVADLVPVESSCLPICKQKALD*GQGDEV Trigger: TACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTG...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAACTGACAAAGAGAAGCTaGTGCCAAGGTTCCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: EPVADLVPVESSCLPICKLTKRS*CQGSLR Trigger: CCTGAGGGAACCTTGGCACCAGCTTCTCTTTGTCAG...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGTACTGGAGAAACAGATaGTGGGCCAGGAGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMYWRNR*WARSLC Trigger: GCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTA...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTGTGTGTCAGGGTCCCCAATGAAGGAGCCAGAGAAAAAGTACCCAAGGAGCGTGAGTAGTTCAAACTaGCACCTTTTTCTCACTGGG | + |
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Preference number: 2 (lower is better) Translates to: ACVSGSPMKEPEKKYPRSVSSSN*HLFLTG Trigger: CCCAGTGAGAAAAAGGTGGCAGTTTGAACTACTCAC...GCTCCTTGGGTACTTTTTCTCTGGCTCCTTCATTGGGGACCCTGACACACAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCTGGCAGGCGAGGCCGTaGCCTTCCCTTTCCTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: ALDGYQLFPYLTLQLKLVWQARP*PSLSCS Trigger: TGAGCAGGAAAGGGAAGGTCACGGCCTCGCCTGCCA...GACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR GCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGCAAACCCAGGTCCTCTaGAAGATCAGAATGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GPRHLVRHHIWCLCERSLQTQVL*KIRMSS Trigger: AGAGCTCATTCTGATCTTGCAGAGGACCTGGGTTTG...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGAGTCTCAAGATACATACTTGTAAAAAGCTGGCGTGGCGAGTTAGAGGCAGGTCTGTGGGGACGTaGGAGCTTCATACTCATTCC | + |
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Preference number: 2 (lower is better) Translates to: CVSLKIHTCKKLAWRVRGRSVGT*ELHTHS Trigger: GGAATGAGTATGAAGCTCTCACGTCCCCACAGACCT...GCCTCTAACTCGCCACGCCAGCTTTTTACAAGTATGTATCTTGAGACTCACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTTCTCCACAAAGTCCTGGCTGTCCTAGAACTTACTACAGAGACCAGTCTAATAGCTCAGAACCCTaGGGGGACAGTAAGGATGGG | + |
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Preference number: 2 (lower is better) Translates to: KVSPQSPGCPRTYYRDQSNSSEP*GDSKDG Trigger: CCCATCCTTACTGTCCCCTCAGGGTTCTGAGCTATT...AGACTGGTCTCTGTAGTAAGTTCTAGGACAGCCAGGACTTTGTGGAGAAACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGTTGAGGACATGGCATTaGGACAAGGTTTCTCCACAA | + |
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Preference number: 2 (lower is better) Translates to: GPRHLVRHHIWCLCERSLLRTWH*DKVSPQ Trigger: TTGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAA...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | CAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGATACTGGAGAAACAGATaGTGGGCCAGGAGCCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: QSKKTQGGTRVSSCICSRYWRNR*WARSLC Trigger: GCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTA...TCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTGCTGCACAGCTGGATTaGTTTGGTTACAGCTGTTCC | + |
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Preference number: 2 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRAAQLD*FGYSCS Trigger: GGAACAGCTGTAACCAAAGCAATCCAGCTGTGCAGC...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGCTTTTCCTTCTTGTTTaGGGACAATCGATTCCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QGGTRVSSCICSRGWPSWLFLLV*GQSIPL Trigger: CAGAGGAATCGATTGTCCCCAAACAAGAAGGAAAAG...CCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTCATCTTCCAGGGCAATaGGGATGTCTCAAGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SCICSRGWPSWSSMGGEVHLPGQ*GCLKNK Trigger: CTTGTTCTTGAGACATCCCCATTGCCCTGGAAGATG...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTGGTGTCTCGAAACTCTaGTGTAAACAGCCTGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: SCICSRGWPSWSSMGGEVGVSKL*CKQPEE Trigger: TTCTTCAGGCTGTTTACAGCAGAGTTTCGAGACACC...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | CAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGATTCTCCAGCCTGCATTaGCCGCCGCTCTTTTCAACT | + |
|
Preference number: 2 (lower is better) Translates to: QSKKTQGGTRVSSCICSRFSSLH*PPLFST Trigger: AGTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAA...TCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGCTCCAAGAATCCATTTaGTCTTCTCGCCCACGTACA | + |
|
Preference number: 2 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMLQESI*SSRPRT Trigger: TGTACGTGGGCGAGAAGACCAAATGGATTCTTGGAG...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR TCA 90 bp | CAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGAGAAGAAAGGATGTGTaGGTCTCAAGATACATACTT | + |
|
Preference number: 2 (lower is better) Translates to: QGGTRVSSCICSRGWPSWRRKDV*VSRYIL Trigger: AAGTATGTATCTTGAGACTCACACATCCTTTCTTCT...CCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTCGAAACTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTGATGAGTTTGGGATGTaGCGTGTCAGGGTCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SRNSAVNSLKKTETHGVFDEFGM*RVRVQG Trigger: ACCCTGGACCCTGACACGGCACATCCCAAACTCATC...AAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAGTTTCGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR GCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCGCCATAGCCACAGACTaGAGAGTAACTCATCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: WQILHITLTRHKGPRHLVAIATD*RVTHLL Trigger: GAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGC...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTGTGAAAGTGAAGATGTaGGACTTATCAGTCACGTTG | + |
|
Preference number: 2 (lower is better) Translates to: SCICSRGWPSWSSMGGEVVKVKM*DLSVTL Trigger: CAACGTGACTGATAAGTCCCACATCTTCACTTTCAC...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CCA 90 bp | CAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGGCTCGAGAAACTGTaGGTGAAAGTGAAGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: QSKKTQGGTRVSSCICSRGLEKL*VKVKMW Trigger: CCACATCTTCACTTTCACCCACAGTTTCTCGAGCCC...TCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCAAGGAGATGAGGTACTaGAGAAACAGATGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: WQILHITLTRHKGPRHLVKEMRY*RNRCWA Trigger: GGCCCAGCATCTGTTTCTCCAGTACCTCATCTCCTT...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTACCCCTCCCATCTTCCAGGGCAATaGGGATGTCTCAAGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: LCCKQPEENRNPWSIYPSHLPGQ*GCLKNK Trigger: CTTGTTCTTGAGACATCCCCATTGCCCTGGAAGATG...GGAGGGGTAAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAAAAAGAAAACAGTCTCTaGTGGAAGACATTTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: EPVADLVPVESSCLPICKKENSL*WKTFGS Trigger: AGACCCAAATGTCTTCCACCAGAGACTGTTTTCTTT...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTGAATTCAATAATCTCTaGCCTGGAGGCTGTTGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: QSSLGLNHQSKKTQGGTREFNNL*PGGCCQ Trigger: TTGACAACAGCCTCCAGGTCAGAGATTATTGAATTC...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGTATCTTATCTCATTTTaGGGACATGGCATTGAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GPRHLVRHHIWCLCERSLYLISF*GHGIET Trigger: TGTCTCAATGCCATGTCCTCAAAATGAGATAAGATA...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCAGAAGGCTCTGGACTaGGGTCAAGGAGATGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: GFRRISTLSLPYTATKTCQKALD*GQGDEV Trigger: TACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTG...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTCGAAACTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTCTGACAAAGAGAAGCTaGTGCCAAGGTTCCCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SRNSAVNSLKKTETHGVFLTKRS*CQGSLR Trigger: CCTGAGGGAACCTTGGCACCAGCTTCTCTTTGTCAG...AAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAGTTTCGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR TCA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAGATTCCTCTGATTTCTaGAGCTCAGTACAAATGATT | + |
|
Preference number: 2 (lower is better) Translates to: NKAEFRTEPWEKSRRETTDSSDF*SSVQMI Trigger: AATCATTTGTACTGAGCTTCAGAAATCAGAGGAATC...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTCCGAGTGCATTTTGTTaGTTTCAAAAAGTCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SCICSRGWPSWSSMGGEVPSAFC*FQKVIF Trigger: GAAGATGACTTTTTGAAATCAACAAAATGCACTCGG...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAATTGAGGACATGGCATTaGGACAAGGTTTCTCCACAA | + |
|
Preference number: 2 (lower is better) Translates to: LSGFRRISTLSLPYTATKLRTWH*DKVSPQ Trigger: TTGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAA...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTGCCATAGCCACAGACTaGAGAGTAACTCATCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GFRRISTLSLPYTATKTCAIATD*RVTHLL Trigger: GAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGC...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | CAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGTGAGTAGTTCAAACTaGCACCTTTTTCTCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QSKKTQGGTRVSSCICSRVSSSN*HLFLTG Trigger: CCCAGTGAGAAAAAGGTGGCAGTTTGAACTACTCAC...TCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCGTGAGTAGTTCAAACTaGCACCTTTTTCTCACTGGG | + |
|
Preference number: 2 (lower is better) Translates to: WQILHITLTRHKGPRHLVVSSSN*HLFLTG Trigger: CCCAGTGAGAAAAAGGTGGCAGTTTGAACTACTCAC...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR TCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAACGGAGCCCAGGACGCTaGCAACAAAATCAAACCTCT | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKRSPGR*QQNQTS Trigger: AGAGGTTTGATTTTGTTGTCAGCGTCCTGGGCTCCG...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTAGAAGAAAGGATGTGTaGGTCTCAAGATACATACTT | + |
|
Preference number: 2 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRRRKDV*VSRYIL Trigger: AAGTATGTATCTTGAGACTCACACATCCTTTCTTCT...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCATGATGTAGGTAACTTAATTTTTGAAACCATGTGCATTCTGGATGTCTCCCAGAAGGCTCTGGACTaGGGTCAAGGAGATGAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: CHDVGNLIFETMCILDVSQKALD*GQGDEV Trigger: TACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTG...GGAGACATCCAGAATGCACATGGTTTCAAAAATTAAGTTACCTACATCATGACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCGAAACTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTCATCTTCCAGGGCAATaGGGATGTCTCAAGAACAAG | + |
|
Preference number: 2 (lower is better) Translates to: SRNSAVNSLKKTETHGVFHLPGQ*GCLKNK Trigger: CTTGTTCTTGAGACATCCCCATTGCCCTGGAAGATG...AAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAGTTTCGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR GCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAGCTGCACAGCTGGATTaGTTTGGTTACAGCTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKAAQLD*FGYSCS Trigger: GGAACAGCTGTAACCAAAGCAATCCAGCTGTGCAGC...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAGCCATAGCCACAGACTaGAGAGTAACTCATCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKAIATD*RVTHLL Trigger: GAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGC...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| 3UTR-3UTR TCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAACCGAGTGCATTTTGTTaGTTTCAAAAAGTCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LSGFRRISTLSLPYTATKPSAFC*FQKVIF Trigger: GAAGATGACTTTTTGAAATCAACAAAATGCACTCGG...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR TCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAAATTACAGGTGGTTGTaGACTGCCCAATATGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKNYRWL*TAQYGC Trigger: GCACCCATATTGGGCAGTTCACAACCACCTGTAATT...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAACTCGTGTCTCTAGCTaGATATGTAGCAGAGGATGG | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKTRVSS*ICSRGW Trigger: CCATCCTCTGCTACATATGCAGCTAGAGACACGAGT...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAAAAATCAAACCTCTCTaGGTTGTCAGGAACAGGCCG | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKKIKPL*VVRNRP Trigger: CGGCCTGTTCCTGACAACCCAGAGAGGTTTGATTTT...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATGATGTAGGTAACTTAATTTTTGAAACCATGTGCATTCTGGATGTCTCCGAAAACAGTCTCTGGTaGAAGACATTTGGGTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: CHDVGNLIFETMCILDVSENSLW*KTFGSG Trigger: CCCAGACCCAAATGTCTTCCACCAGAGACTGTTTTC...GGAGACATCCAGAATGCACATGGTTTCAAAAATTAAGTTACCTACATCATGACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAATTAATAACTCCACAAACAGGCCGAAACACATATGTGGGTATGACTTGAAAGTGAACTGCCCAATATaGGTGCTAGAAAAGCAAACC | + |
|
Preference number: 2 (lower is better) Translates to: VINNSTNRPKHICGYDLKVNCPI*VLEKQT Trigger: GGTTTGCTTTTCTAGCACCCATATTGGGCAGTTCAC...TTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGAGTTATTAATTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCCGAGTGCATTTTGTTaGTTTCAAAAAGTCATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GFRRISTLSLPYTATKTCPSAFC*FQKVIF Trigger: GAAGATGACTTTTTGAAATCAACAAAATGCACTCGG...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCAGAAGAAAGGATGTGTaGGTCTCAAGATACATACTT | + |
|
Preference number: 2 (lower is better) Translates to: ALDGYQLFPYLTLQLKLVRRKDV*VSRYIL Trigger: AAGTATGTATCTTGAGACTCACACATCCTTTCTTCT...GACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CCA 90 bp | TGTCATGATGTAGGTAACTTAATTTTTGAAACCATGTGCATTCTGGATGTCTCCAAAGAAAACAGTCTCTaGTGGAAGACATTTGGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: CHDVGNLIFETMCILDVSKENSL*WKTFGS Trigger: AGACCCAAATGTCTTCCACCAGAGACTGTTTTCTTT...GGAGACATCCAGAATGCACATGGTTTCAAAAATTAAGTTACCTACATCATGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCACAGCCCTACAAACACTTCGGGGACTCTTaGAGGCGGAAGGAGGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PVPGRMLTRVEHRAQPYKHFGDS*RRKEVC Trigger: ACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGTG...TTTGTAGGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR CCA 72 bp | GCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTaGAGCACAGGGCACAGCCCTACAAAGAAGGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: ARSLCQAGCSRE*STGHSPTKKEL Trigger: AAGTTCCTTCTTTGTAGGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR CCA 72 bp | GTGCCAAGGTTCCCTCAGGGAGAGAGCCCTTTCCCCTaGCCTGAACGGAGTCCCCCTGCATTACATCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VPRFPQGESPFP*PERSPPALHPR Trigger: CCTTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCTGAGGGAACCTTGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | AAGGTTCCCTCAGGGAGAGAGCCCTTTCCCCTGGCCTaGACGGAGTCCCCCTGCATTACATCCAAGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KVPSGREPFPLA*TESPCITSKVS Trigger: GGAGACCTTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCTGAGGGAACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR GCA 72 bp | ACTGGGGTCAAGGAGATGAGGTACTGGAGAAACAGATaGTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TGVKEMRYWRNR*WARSLCQAGCS Trigger: TGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAGCATCTGTTTCTCCAGTACCTCATCTCCTTGACCCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CCA 72 bp | TCATACTCATTCCCACGGCTCTGTCGCACAAGCCAGTaGCCATTGGCAGGCGAGGCCGTGACCTTCCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SYSFPRLCRTSQ*PLAGEAVTFPF Trigger: GAAAGGGAAGGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACAGAGCCGTGGGAATGAGTATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR CCA 72 bp | ACACTTCGGGGACTCTTTGAGGCGGAAGGAGGTCTGTaGGGACGTGAGAGCTTCATACTCATTCCCACGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLRGLFEAEGGL*GRESFILIPTA Trigger: AGCCGTGGGAATGAGTATGAAGCTCTCACGTCCCCACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGAGTCTCAAGATACATACTTGTAAAAAGCTGGCGTGGCGAGTTAGAGGCACAAGCCAGTGGCCATaGGCAGGCGAGGCCGTGACC | + |
|
Preference number: 3 (lower is better) Translates to: CVSLKIHTCKKLAWRVRGTSQWP*AGEAVT Trigger: GGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGT...GCCTCTAACTCGCCACGCCAGCTTTTTACAAGTATGTATCTTGAGACTCACACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGGCCATAGCCACAGACTGCAGAGTAACTCATCTGCTCAGGGCTGCACAGTCTGGTGGAAGACATTaGGGTCTGGGGGCTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: RRAIATDCRVTHLLRAAQSGGRH*GLGAVS Trigger: ACTTACAGCCCCCAGACCCAAATGTCTTCCACCAGA...CTGTGCAGCCCTGAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGCCCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTGTGTCAGGGTCCCCAATGAAGGAGCCAGAGAAAAAGTACCCAAGGAGCCACAGCTGGATTGCTTaGGTTACAGCTGTTCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: ACVSGSPMKEPEKKYPRSHSWIA*VTAVPT Trigger: GGTAGGAACAGCTGTAACCAAAGCAATCCAGCTGTG...GCTCCTTGGGTACTTTTTCTCTGGCTCCTTCATTGGGGACCCTGACACACAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGTCTGGTGGAAGACATTaGGGTCTGGGGGCTGTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: GPRHLVRHHIWCLCERSLSGGRH*GLGAVS Trigger: ACTTACAGCCCCCAGACCCAAATGTCTTCCACCAGA...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTGTGTCAGGGTCCCCAATGAAGGAGCCAGAGAAAAAGTACCCAAGGAGCTTTGAGGACATGGCATaGAGACAAGGTTTCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: ACVSGSPMKEPEKKYPRSFEDMA*RQGFST Trigger: TGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAAA...GCTCCTTGGGTACTTTTTCTCTGGCTCCTTCATTGGGGACCCTGACACACAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CCA 72 bp | AACTCATCTGCTCAGGGCTGCACAGCTGGATTGCTTTaGTTACAGCTGTTCCTACCAGCCTGTGTTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NSSAQGCTAGLL*LQLFLPACVQV Trigger: AACCTGAACACAGGCTGGTAGGAACAGCTGTAACCAAAGCAATCCAGCTGTGCAGCCCTGAGCAGATGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAACTTCTCCAGCCTGCATaGGCCGCCGCTCTTTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSGFRRISTLSLPYTATKLLQPA*AAALFN Trigger: GTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAAG...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTTTCTCCACAAAGTCCTGGCTGTCCTAGAACTTACTACAGAGACCAGTCTTCAGACAGGATGAGTTaGGGATGTGCCGTGTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KVSPQSPGCPRTYYRDQSSDRMS*GCAVSG Trigger: CCCTGACACGGCACATCCCAAACTCATCCTGTCTGA...AGACTGGTCTCTGTAGTAAGTTCTAGGACAGCCAGGACTTTGTGGAGAAACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CAA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAACTCCAAGAATCCATTaGGTCTTCTCGCCCACGTAC | + |
|
Preference number: 3 (lower is better) Translates to: NKAEFRTEPWEKSRRETTTPRIH*VFSPTY Trigger: GTACGTGGGCGAGAAGACCAAATGGATTCTTGGAGT...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CAA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGACACAGCTGGATTGCTTaGGTTACAGCTGTTCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: VSSCICSRGWPSWSSMGGHSWIA*VTAVPT Trigger: GGTAGGAACAGCTGTAACCAAAGCAATCCAGCTGTG...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | GGCCAGGTATCATTAAGCAGAAATAGCTCAGAACCCTaGGGGGACAGTAAGGATGGGTTCATCTTCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GQVSLSRNSSEP*GDSKDGFIFRD Trigger: GTCCCTGAAGATGAACCCATCCTTACTGTCCCCTCAGGGTTCTGAGCTATTTCTGCTTAATGATACCTGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR CCA 72 bp | GGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATaGCCTAGTTGGTCATCAATGGGAGGAGAGGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: GTRVSSCICSRG*PSWSSMGGEVF Trigger: AAAAACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CCA 72 bp | CACAAAGGTCCCAGACACTTGGTCAGACATCACATTTaGTGTCTCTGTGAGAGGAGCTTGGACGAGATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: HKGPRHLVRHHI*CLCERSLDEIS Trigger: GCTAATCTCGTCCAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACCTTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCTGTGTGTCAGGGTCCCCAATGAAGGAGCCAGAGAAAAAGTACCCAAGGAGCTGGCCCGAGTGCATTTaGTTGATTTCAAAAAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: ACVSGSPMKEPEKKYPRSWPECI*LISKSH Trigger: ATGACTTTTTGAAATCAACAAAATGCACTCGGGCCA...GCTCCTTGGGTACTTTTTCTCTGGCTCCTTCATTGGGGACCCTGACACACAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGTTTGAGGACATGGCATaGAGACAAGGTTTCTCCACA | + |
|
Preference number: 3 (lower is better) Translates to: GPRHLVRHHIWCLCERSLFEDMA*RQGFST Trigger: TGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAAA...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | CCACAAACAGGCCGAAACACATATGTGGGTATGACTTaGAAGTGCCTTGCCTTCTTTCCCCAATCCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: PQTGRNTYVGMT*KCLAFFPQSTS Trigger: GGATGTGGATTGGGGAAAGAAGGCAAGGCACTTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAATCTTTTCCTTCTTGTTaGGGGACAATCGATTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EPVADLVPVESSCLPICKSFPSC*GTIDSS Trigger: AGAGGAATCGATTGTCCCCAAACAAGAAGGAAAAGA...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTGGTGCCTTTGAAGGCTaGAAGTCTCATCCTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRGAFEG*KSHPLD Trigger: ATCTAGAGGATGAGACTTCAAGCCTTCAAAGGCACC...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTCTGACCTGGAGGCTGTaGTCAAATCTAATAGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRLTWRL*SNLIVL Trigger: CAAGACTATTAGATTTGACAACAGCCTCCAGGTCAG...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR GCA 72 bp | TCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTaGATATGTAGCAGAGGATGGCCTAGTTGGTCATCA | + |
|
Preference number: 3 (lower is better) Translates to: SKKTQGGTRVSS*ICSRGWPSWSS Trigger: TGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CCA 72 bp | GATATGGAATTACAGGTGGTTGTGAACTGCCCAATATaGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: DMELQVVVNCPI*VLEKQTQVLCK Trigger: CTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCAGTTCACAACCACCTGTAATTCCATATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR GCA 72 bp | GATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTaGAAATCTGTAATTAATAACTCCACAAACAGGCCG | + |
|
Preference number: 3 (lower is better) Translates to: DLVPVESSCLPI*KSVINNSTNRP Trigger: CGGCCTGTTTGTGGAGTTATTAATTACAGATTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR GCA 72 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTaGCTTCCCATCTGCAAATCTGTAATTAATAACTCC | + |
|
Preference number: 3 (lower is better) Translates to: EPVADLVPVESS*LPICKSVINNS Trigger: GGAGTTATTAATTACAGATTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | CCTTCTTGTTTGGGGACAATCGATTCCTCTGATTTCTaGAGCTCAGTACAAATGATTAGAGGGGCCGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: PSCLGTIDSSDF*SSVQMIRGAVF Trigger: AAACACGGCCCCTCTAATCATTTGTACTGAGCTTCAGAAATCAGAGGAATCGATTGTCCCCAAACAAGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| 3UTR GCA 72 bp | CCGAAACACATATGTGGGTATGACTTGAAAGTGCCTTaGCTTCTTTCCCCAATCCACATCCAAAACTTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: PKHICGYDLKVP*LLSPIHIQNLD Trigger: ATCCAAGTTTTGGATGTGGATTGGGGAAAGAAGGCAAGGCACTTTCAAGTCATACCCACATATGTGTTTCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCCTGTGTTCAGGTTTCTaGGGATTCTGGTTCCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: ALDGYQLFPYLTLQLKLVLCSGF*GFWFLS Trigger: TGACAGGAACCAGAATCCCAAGAAACCTGAACACAG...GACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCGGTGCCTTTGAAGGCTaGAAGTCTCATCCTCTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: ALDGYQLFPYLTLQLKLVGAFEG*KSHPLD Trigger: ATCTAGAGGATGAGACTTCAAGCCTTCAAAGGCACC...GACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | TTTGGGTACTGTAATGGCAAATTTTACATATCACTTTaGCCCGTCACAAAGGTCCCAGACACTTGGTCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: FGYCNGKFYISL*PVTKVPDTWSD Trigger: GTCTGACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCATTACAGTACCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | TCCATCTCTAACCCTGAACAGAGAAGAAAGGATGTGTaGGTCTCAAGATACATACTTGTAAAAAGCTGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SISNPEQRRKDV*VSRYILVKSWR Trigger: ACGCCAGCTTTTTACAAGTATGTATCTTGAGACTCACACATCCTTTCTTCTCTGTTCAGGGTTAGAGATGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTTGGCCCGAGTGCATTTaGTTGATTTCAAAAAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: GFRRISTLSLPYTATKTCWPECI*LISKSH Trigger: ATGACTTTTTGAAATCAACAAAATGCACTCGGGCCA...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | AATATGATATCTTATCTCATTTTGAGGACATGGCATTaGGACAAGGTTTCTCCACAAAGTCCTGGCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NMISYLILRTWH*DKVSPQSPGCP Trigger: AGGACAGCCAGGACTTTGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAAAATGAGATAAGATATCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | TACACTGCAACTAAAACTTGTCTCTTTCTAGTACTCTaGCCTGCCAACTTCAGTCTCGTATTTATTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: YTATKTCLFLVL*PANFSLVFIFC Trigger: ACAGAAAATAAATACGAGACTGAAGTTGGCAGGTCAGAGTACTAGAAAGAGACAAGTTTTAGTTGCAGTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR TCA 72 bp | AATGAGCTCTTAATCGCTGAACCATCTTTTCAGCCCTaGATTCATTATTTTGTTGTCTCACCTTATAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: NELLIAEPSFQP*IHYFVVSPYNL Trigger: AAGATTATAAGGTGAGACAACAAAATAATGAATTCAGGGCTGAAAAGATGGTTCAGCGATTAAGAGCTCATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCATCTTCATCTCTGTCCTaGCCGTCCCGGAACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQEPVPGRMLTRVEHRASSSLS*PSRNTW Trigger: CCACGTGTTCCGGGACGGGCAGGACAGAGATGAAGA...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCAAATAGCTCAGAACCCTaGGGGGACAGTAAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGQEPVPGRMLTRVEHRANSSEP*GDSKDG Trigger: CCCATCCTTACTGTCCCCTCAGGGTTCTGAGCTATT...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CAA 72 bp | TCATTCCCACGGCTCTGTCGCACAAGCCAGTGGCCATaGGCAGGCGAGGCCGTGACCTTCCCTTTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFPRLCRTSQWP*AGEAVTFPFLL Trigger: GAGCAGGAAAGGGAAGGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACAGAGCCGTGGGAATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGAGCCCTTTCCCCTGGCCTGAACGGAGTCCCCCTGCATTACATCCAATGTCGCACAAGCCAGTaGCCATTGGCAGGCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RERALSPGLNGVPLHYIQCRTSQ*PLAGEA Trigger: GGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACA...TTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGCGTGGACAGCCTGGGTaGGAGGTAGGTGTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGGTRVSSCICSRGWPSWRGQPG*EVGVRA Trigger: GGCCCGGACACCTACCTCGCACCCAGGCTGTCCACG...CCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCACCTGCCCTTATATTCTaGCATCAGGTCTTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LGQEPVPGRMLTRVEHRAPALIF*HQVFIS Trigger: AGAGATGAAGACCTGATGCCAGAATATAAGGGCAGG...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGAGCCCTTTCCCCTGGCCTGAACGGAGTCCCCCTGCATTACATCCAAGCCGTCGTCTTCTCTTaGCCAAGGGCCTCATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: RERALSPGLNGVPLHYIQAVVFS*PRASLW Trigger: CCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGC...TTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAATGGCAGGCGAGGCCGTaGCCTTCCCTTTCCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EPVADLVPVESSCLPICKWQARP*PSLSCS Trigger: TGAGCAGGAAAGGGAAGGTCACGGCCTCGCCTGCCA...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTCCCTCAGGGAGAGAGCCCTTTCCCCTGGCCTGAACGGAGTCCCCCTGCAGACAATCGATTCCTCTaGTTTCTGAAGCTCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: RFPQGESPFPWPERSPPADNRFL*FLKLST Trigger: TGTACTGAGCTTCAGAAATCAGAGGAATCGATTGTC...TGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCTGAGGGAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGATGTCGCACAAGCCAGTaGCCATTGGCAGGCGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSCICSRGWPSWSSMGGCRTSQ*PLAGEA Trigger: GGCCTCGCCTGCCAATGGCCACTGGCTTGTGCGACA...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGAGCCCTTTCCCCTGGCCTGAACGGAGTCCCCCTGCATTACATCCAAGGGCTCGAGAAACTGTaGGTGAAAGTGAAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RERALSPGLNGVPLHYIQGLEKL*VKVKMW Trigger: CCACATCTTCACTTTCACCCACAGTTTCTCGAGCCC...TTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CCCCTGCATTACATCCAAGGTCTCCTCCTAAACCTGGCCCGAGTGCATTTTGTTCCAGGGCATTGTCCCTaGTTCTGCTGGACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLHYIQGLLLNLARVHFVPGHCP*FCWTLL Trigger: CAGCAGTGTCCAGCAGAATCAGGGACAATGCCCTGG...AACAAAATGCACTCGGGCCAGGTTTAGGAGGAGACCTTGGATGTAATGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAAACTTCGGGGACTCTTTaGGGCGGAAGGAGGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPVADLVPVESSCLPICKTSGTL*GGRRSV Trigger: CACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGT...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAACGTGGACAGCCTGGGTaGGAGGTAGGTGTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRRISTLSLPYTATKRGQPG*EVGVRA Trigger: GGCCCGGACACCTACCTCGCACCCAGGCTGTCCACG...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGAACCATCCCACTGATTaGCACAGCAGCTCGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QGGTRVSSCICSRGWPSWNHPTD*HSSSIH Trigger: GTGGATCGAGCTGCTGTGTCAATCAGTGGGATGGTT...CCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTACTTCGGGGACTCTTTaGGGCGGAAGGAGGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SCICSRGWPSWSSMGGEVTSGTL*GGRRSV Trigger: CACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGT...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACCACAGAAGGCTCTGGACTGGGGTCAAGGAGATGAGGTACTGGAGAAACGGCATCCCTCACCAGTaGCGTCCTGCCCTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: RNHRRLWTGVKEMRYWRNGIPHQ*RPALIF Trigger: GAATATAAGGGCAGGACGGCACTGGTGAGGGATGCC...GTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGGATGAGTTTGGGATGTaGCGTGTCAGGGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRHLVRHHIWCLCERSLDEFGM*RVRVQG Trigger: ACCCTGGACCCTGACACGGCACATCCCAAACTCATC...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCCATAGCCACAGACTGCAGAGTAACTCATCTGCTCAGGGCTGCACAGCTTGGTCTCTCCATATaGACTGACATCTTCCGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRAIATDCRVTHLLRAAQLGLSI*TDIFRE Trigger: CTCACGGAAGATGTCAGTTCATATGGAGAGACCAAG...CTGTGCAGCCCTGAGCAGATGAGTTACTCTGCAGTCTGTGGCTATGGCCCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138395.9 |
||
| CDS-3UTR TCA 90 bp | CAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGATGGCAGGCGAGGCCGTaGCCTTCCCTTTCCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKKTQGGTRVSSCICSRWQARP*PSLSCS Trigger: TGAGCAGGAAAGGGAAGGTCACGGCCTCGCCTGCCA...TCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGAATAGCTCAGAACCCTaGGGGGACAGTAAGGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRHLVRHHIWCLCERSLNSSEP*GDSKDG Trigger: CCCATCCTTACTGTCCCCTCAGGGTTCTGAGCTATT...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | CAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCACCAGTGCCGTCCTaGCCTTATATTCTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: QGGTRVSSCICSRGWPSWSPVPS*PYILAS Trigger: TGATGCCAGAATATAAGGGCAGGACGGCACTGGTGA...CCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGATGAGTTTGGGATGTaGCGTGTCAGGGTCCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSCICSRGWPSWSSMGGDEFGM*RVRVQG Trigger: ACCCTGGACCCTGACACGGCACATCCCAAACTCATC...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTGCGGAAGGAGGTCTGTaGGGACGTGAGAGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: SCICSRGWPSWSSMGGEVAEGGL*GRESFI Trigger: TATGAAGCTCTCACGTCCCCACAGACCTCCTTCCGC...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAGCGGAAGGAGGTCTGTaGGGACGTGAGAGCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NKAEFRTEPWEKSRRETTAEGGL*GRESFI Trigger: TATGAAGCTCTCACGTCCCCACAGACCTCCTTCCGC...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAAACCATCCCACTGATTaGCACAGCAGCTCGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NKAEFRTEPWEKSRRETTNHPTD*HSSSIH Trigger: GTGGATCGAGCTGCTGTGTCAATCAGTGGGATGGTT...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTTTTCATCCAGGGAGTaGACCTCTGAAAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGTRVSSCICSRGWPSWFSSRE*TSERES Trigger: ACTCTCCCTTTCAGAGGTTCACTCCCTGGATGAAAA...CCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTTTCTCCACAAAGTCCTGGCTGTCCTAGAACTTACTACAGAGACCAGTCTCCAGGGCATTGTCCCTaGTTCTGCTGGACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KVSPQSPGCPRTYYRDQSPGHCP*FCWTLL Trigger: CAGCAGTGTCCAGCAGAATCAGGGACAATGCCCTGG...AGACTGGTCTCTGTAGTAAGTTCTAGGACAGCCAGGACTTTGTGGAGAAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAAGGTCTGTGGGGACGTaGGAGCTTCATACTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSCICSRGWPSWSSMGGRSVGT*ELHTHS Trigger: GGAATGAGTATGAAGCTCTCACGTCCCCACAGACCT...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AGGGAGAGAGCCCTTTCCCCTGGCCTGAACGGAGTCCCCCTGCATTACATCCAATTTTTCCCCTCATCGTaGAGACAAGGTTCAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RERALSPGLNGVPLHYIQFFPSS*RQGSKK Trigger: TTTCTTTGAACCTTGTCTTCACGATGAGGGGAAAAA...TTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTACCCCTCCTCTTCATCTCTGTCCTaGCCGTCCCGGAACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCKQPEENRNPWSIYPSSSSLS*PSRNTW Trigger: CCACGTGTTCCGGGACGGGCAGGACAGAGATGAAGA...GGAGGGGTAAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | AGAAACCACAGAAGGCTCTGGACTGGGGTCAAGGAGATGAGGTACTGGAGAAACTCACCAGTGCCGTCCTaGCCTTATATTCTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RNHRRLWTGVKEMRYWRNSPVPS*PYILAS Trigger: TGATGCCAGAATATAAGGGCAGGACGGCACTGGTGA...GTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGTCACCAGTGCCGTCCTaGCCTTATATTCTGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GPRHLVRHHIWCLCERSLSPVPS*PYILAS Trigger: TGATGCCAGAATATAAGGGCAGGACGGCACTGGTGA...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGGGAGAGAGCCCTTTCCCCTGGCCTGAACGGAGTCCCCCTGCATTACATCCAACCTTTTTCTTTGGCGTaGTCTTCCAGAAGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RERALSPGLNGVPLHYIQPFSLA*SSRRFS Trigger: AGAAAATCTTCTGGAAGACCACGCCAAAGAAAAAGG...TTGGATGTAATGCAGGGGGACTCCGTTCAGGCCAGGGGAAAGGGCTCTCTCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTTTCTCCAGCCTGCATTaGCCGCCGCTCTTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SCICSRGWPSWSSMGGEVFSSLH*PPLFST Trigger: AGTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAA...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACCACAGAAGGCTCTGGACTGGGGTCAAGGAGATGAGGTACTGGAGAAACAAAGAAAGGGCGAAGTaGGCTCGAGAAACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RNHRRLWTGVKEMRYWRNKERAK*ARETVG Trigger: ACCCACAGTTTCTCGAGCCCACTTCGCCCTTTCTTT...GTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGAAAGAAAGGGCGAAGTaGGCTCGAGAAACTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPRHLVRHHIWCLCERSLKERAK*ARETVG Trigger: ACCCACAGTTTCTCGAGCCCACTTCGCCCTTTCTTT...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CAA 72 bp | CAGAGTAACTCATCTGCTCAGGGCTGCACAGCTGGATaGCTTTGGTTACAGCTGTTCCTACCAGCCTGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QSNSSAQGCTAG*LWLQLFLPACV Trigger: AACACAGGCTGGTAGGAACAGCTGTAACCAAAGCAATCCAGCTGTGCAGCCCTGAGCAGATGAGTTACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAACCAGGGCATTGTCCCTaGTTCTGCTGGACACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRRISTLSLPYTATKPGHCP*FCWTLL Trigger: CAGCAGTGTCCAGCAGAATCAGGGACAATGCCCTGG...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCTCTTCATCTCTGTCCTaGCCGTCCCGGAACACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WQILHITLTRHKGPRHLVSSSLS*PSRNTW Trigger: CCACGTGTTCCGGGACGGGCAGGACAGAGATGAAGA...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTACCCCTCCGGCATCCCTCACCAGTaGCGTCCTGCCCTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: LCCKQPEENRNPWSIYPSGIPHQ*RPALIF Trigger: GAATATAAGGGCAGGACGGCACTGGTGAGGGATGCC...GGAGGGGTAAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTACCCCTCCGCCGTCGTCTTCTCTTaGCCAAGGGCCTCATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LCCKQPEENRNPWSIYPSAVVFS*PRASLW Trigger: CCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGC...GGAGGGGTAAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAACTCCAAGAATCCATTTaGTCTTCTCGCCCACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: EPVADLVPVESSCLPICKLQESI*SSRPRT Trigger: TGTACGTGGGCGAGAAGACCAAATGGATTCTTGGAG...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGGGCTCGAGAAACTGTaGGTGAAAGTGAAGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSCICSRGWPSWSSMGGGLEKL*VKVKMW Trigger: CCACATCTTCACTTTCACCCACAGTTTCTCGAGCCC...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | AAGGTTTCTCCACAAAGTCCTGGCTGTCCTAGAACTTACTACAGAGACCAGTCTAACCATCCCACTGATTaGCACAGCAGCTCGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSPQSPGCPRTYYRDQSNHPTD*HSSSIH Trigger: GTGGATCGAGCTGCTGTGTCAATCAGTGGGATGGTT...AGACTGGTCTCTGTAGTAAGTTCTAGGACAGCCAGGACTTTGTGGAGAAACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTACCCCTCCCGGAGCCCAGGACGCTaGCAACAAAATCAAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LCCKQPEENRNPWSIYPSRSPGR*QQNQTS Trigger: AGAGGTTTGATTTTGTTGTCAGCGTCCTGGGCTCCG...GGAGGGGTAAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAGCCGTCGTCTTCTCTTaGCCAAGGGCCTCATTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRRISTLSLPYTATKAVVFS*PRASLW Trigger: CCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGC...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTGAGTCTCAAGATACATACTTGTAAAAAGCTGGCGTGGCGAGTTAGAGGCTTCTCCAGCCTGCATTaGCCGCCGCTCTTTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: CVSLKIHTCKKLAWRVRGFSSLH*PPLFST Trigger: AGTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAA...GCCTCTAACTCGCCACGCCAGCTTTTTACAAGTATGTATCTTGAGACTCACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTAAAATCAAACCTCTCTaGGTTGTCAGGAACAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SCICSRGWPSWSSMGGEVKIKPL*VVRNRP Trigger: CGGCCTGTTCCTGACAACCCAGAGAGGTTTGATTTT...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAACGGAGCCCAGGACGCTaGCAACAAAATCAAACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRRISTLSLPYTATKRSPGR*QQNQTS Trigger: AGAGGTTTGATTTTGTTGTCAGCGTCCTGGGCTCCG...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCAGGTCTGTGGGGACGTaGGAGCTTCATACTCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: WQILHITLTRHKGPRHLVRSVGT*ELHTHS Trigger: GGAATGAGTATGAAGCTCTCACGTCCCCACAGACCT...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | GCCTGTGTGTCAGGGTCCCCAATGAAGGAGCCAGAGAAAAAGTACCCAAGGAGCGATTCCTCTGATTTCTaGAGCTCAGTACAAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: ACVSGSPMKEPEKKYPRSDSSDF*SSVQMI Trigger: AATCATTTGTACTGAGCTTCAGAAATCAGAGGAATC...GCTCCTTGGGTACTTTTTCTCTGGCTCCTTCATTGGGGACCCTGACACACAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCCAGACACTTGGTCAGACATCACATTTGGTGTCTCTGTGAGAGGAGCTTGGTCTTCCTTTTTCTTTaGCGTGGTCTTCCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GPRHLVRHHIWCLCERSLVFLFL*RGLPED Trigger: ATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGAC...CAAGCTCCTCTCACAGAGACACCAAATGTGATGTCTGACCAAGTGTCTGGGACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | TGTGTGAGTCTCAAGATACATACTTGTAAAAAGCTGGCGTGGCGAGTTAGAGGCTTTTCATCCAGGGAGTaGACCTCTGAAAGGGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVSLKIHTCKKLAWRVRGFSSRE*TSERES Trigger: ACTCTCCCTTTCAGAGGTTCACTCCCTGGATGAAAA...GCCTCTAACTCGCCACGCCAGCTTTTTACAAGTATGTATCTTGAGACTCACACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTGGCATCCCTCACCAGTaGCGTCCTGCCCTTATATTC | + |
|
Preference number: 4 (lower is better) Translates to: GFRRISTLSLPYTATKTCGIPHQ*RPALIF Trigger: GAATATAAGGGCAGGACGGCACTGGTGAGGGATGCC...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAATTTTCTCCATCGCTTaGTCATACAGCAGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSCICSRGWPSWSSMGGIFSIA*SYSSFS Trigger: AGAGAAGCTGCTGTATGAGCAAGCGATGGAGAAAAT...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| CDS-3UTR CCA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTGTCTTCCTTTTTCTTTaGCGTGGTCTTCCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCICSRGWPSWSSMGGEVVFLFL*RGLPED Trigger: ATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGAC...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AGAAACCACAGAAGGCTCTGGACTGGGGTCAAGGAGATGAGGTACTGGAGAAACTTCTTGAGGGCTTTGTaGAGTCTTCCTTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RNHRRLWTGVKEMRYWRNFLRAL*SLPFSL Trigger: CAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAA...GTTTCTCCAGTACCTCATCTCCTTGACCCCAGTCCAGAGCCTTCTGTGGTTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACAGTGAAAGTGAAGATGTaGGACTTATCAGTCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: NKAEFRTEPWEKSRRETTVKVKM*DLSVTL Trigger: CAACGTGACTGATAAGTCCCACATCTTCACTTTCAC...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CAA 72 bp | TCCACAAACAGGCCGAAACACATATGTGGGTATGACTaGAAAGTGCCTTGCCTTCTTTCCCCAATCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: STNRPKHICGYD*KVPCLLSPIHI Trigger: GATGTGGATTGGGGAAAGAAGGCAAGGCACTTTCAAGTCATACCCACATATGTGTTTCGGCCTGTTTGTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTGACAATCGATTCCTCTaGTTTCTGAAGCTCAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRDNRFL*FLKLST Trigger: TGTACTGAGCTTCAGAAATCAGAGGAATCGATTGTC...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGATTCTTGAGGGCTTTGTaGAGTCTTCCTTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSSCICSRGWPSWSSMGGFLRAL*SLPFSL Trigger: CAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAA...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCCTCCAAGAATCCATTTaGTCTTCTCGCCCACGTACA | + |
|
Preference number: 4 (lower is better) Translates to: WQILHITLTRHKGPRHLVLQESI*SSRPRT Trigger: TGTACGTGGGCGAGAAGACCAAATGGATTCTTGGAG...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | AAGGTTTCTCCACAAAGTCCTGGCTGTCCTAGAACTTACTACAGAGACCAGTCTGTCTTCCTTTTTCTTTaGCGTGGTCTTCCAGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVSPQSPGCPRTYYRDQSVFLFL*RGLPED Trigger: ATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGAC...AGACTGGTCTCTGTAGTAAGTTCTAGGACAGCCAGGACTTTGTGGAGAAACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR TCA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGGATTCCTCTGATTTCTaGAGCTCAGTACAAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMDSSDF*SSVQMI Trigger: AATCATTTGTACTGAGCTTCAGAAATCAGAGGAATC...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTAAAATCAAACCTCTCTaGGTTGTCAGGAACAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GFRRISTLSLPYTATKTCKIKPL*VVRNRP Trigger: CGGCCTGTTCCTGACAACCCAGAGAGGTTTGATTTT...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCCTTTTCCTTCTTGTTTaGGGACAATCGATTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WQILHITLTRHKGPRHLVLFLLV*GQSIPL Trigger: CAGAGGAATCGATTGTCCCCAAACAAGAAGGAAAAG...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCCTGCCCTTATATTCTaGCATCAGGTCTTCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GFRRISTLSLPYTATKTCPALIF*HQVFIS Trigger: AGAGATGAAGACCTGATGCCAGAATATAAGGGCAGG...ACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAACCTTTTTCTTTGGCGTaGTCTTCCAGAAGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSGFRRISTLSLPYTATKPFSLA*SSRRFS Trigger: AGAAAATCTTCTGGAAGACCACGCCAAAGAAAAAGG...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | CAATCAAAGAAAACACAAGGAGGGACTCGTGTCTCTAGCTGCATATGTAGCAGACCTTTTTCTTTGGCGTaGTCTTCCAGAAGATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSKKTQGGTRVSSCICSRPFSLA*SSRRFS Trigger: AGAAAATCTTCTGGAAGACCACGCCAAAGAAAAAGG...TCTGCTACATATGCAGCTAGAGACACGAGTCCCTCCTTGTGTTTTCTTTGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| 3UTR CAA 72 bp | AAATATGATATCTTATCTCATTTTGAGGACATGGCATaGAGACAAGGTTTCTCCACAAAGTCCTGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KYDILSHFEDMA*RQGFSTKSWLS Trigger: GGACAGCCAGGACTTTGTGGAGAAACCTTGTCTCAATGCCATGTCCTCAAAATGAGATAAGATATCATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CCA 90 bp | TGTCATGATGTAGGTAACTTAATTTTTGAAACCATGTGCATTCTGGATGTCTCCTTCTTGAGGGCTTTGTaGAGTCTTCCTTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: CHDVGNLIFETMCILDVSFLRAL*SLPFSL Trigger: CAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAA...GGAGACATCCAGAATGCACATGGTTTCAAAAATTAAGTTACCTACATCATGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCAACTCCAAGAATCCATTaGGTCTTCTCGCCCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGQEPVPGRMLTRVEHRATPRIH*VFSPTY Trigger: GTACGTGGGCGAGAAGACCAAATGGATTCTTGGAGT...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCACAGCCCAGTCTTCCTTTTTCTTaGGCGTGGTCTTCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QEPVPGRMLTRVEHRAQPSLPFS*AWSSRR Trigger: TCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACT...GGGCTGTGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCAAGTCTTCCTTTTTCTTaGGCGTGGTCTTCCAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LGQEPVPGRMLTRVEHRASLPFS*AWSSRR Trigger: TCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACT...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS CCA 90 bp | GACCACAGAAAGAGCCACCGCTGGAGAGGACAGACTTCCTCGTTCTaGGGCTCCAATAATCATGGCCGTCGTCTTCTCTTGGCCAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DHRKSHRWRGQTSSF*GSNNHGRRLLLAKG Trigger: GCCCTTGGCCAAGAGAAGACGACGGCCATGATTATTGGAGCCCCAGAACGAGGAAGTCTGTCCTCTCCAGCGGTGGCTCTTTCTGTGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGCCAGGAGCCTGTGCCAGGCCGGATGCTCACGAGAGTGGAGCACAGGGCATCTTTTCCTTCTTGTTaGGGGACAATCGATTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LGQEPVPGRMLTRVEHRASFPSC*GTIDSS Trigger: AGAGGAATCGATTGTCCCCAAACAAGAAGGAAAAGA...TGCCCTGTGCTCCACTCTCGTGAGCATCCGGCCTGGCACAGGCTCCTGGCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CAGGGTCCAGGGTCACTGCCACAAAATGTAGCCGGGCTCTTCTCCAGCCTGCATACATTTCCCAGGGCATaGTCCCTGATTCTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: QGPGSLPQNVAGLFSSLHTFPRA*SLILLD Trigger: GTCCAGCAGAATCAGGGACAATGCCCTGGGAAATGT...ATGCAGGCTGGAGAAGAGCCCGGCTACATTTTGTGGCAGTGACCCTGGACCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
||
| CDS GCA 90 bp | GCAGGATGTAGCTTTCCTTGTGGGCATCCCTCACCAGTGCCGTCCTaGCCTTATATTCTGGCATCAGGTCTTCATCTCTGTCCTGCCCGT | + |
|
Preference number: 5 (lower is better) Translates to: AGCSFPCGHPSPVPS*PYILASGLHLCPAR Trigger: ACGGGCAGGACAGAGATGAAGACCTGATGCCAGAATATAAGGGCAGGACGGCACTGGTGAGGGATGCCCACAAGGAAAGCTACATCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030396.15 ENSMUST00000124626.9 ENSMUST00000133956.8 ENSMUST00000138395.9 ENSMUST00000141227.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCATTACATCCAAGGTCTCCTCCTAAACCTGGCCCGAGTGCATTTTGTTGGCCGTCGTCTTCTCTaGGCCAAGGGCCTCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: PLHYIQGLLLNLARVHFVGRRLL*AKGLIM Trigger: CATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCC...AACAAAATGCACTCGGGCCAGGTTTAGGAGGAGACCTTGGATGTAATGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAAGGCCGTCGTCTTCTCTaGGCCAAGGGCCTCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: EPVADLVPVESSCLPICKGRRLL*AKGLIM Trigger: CATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCC...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTGCATTACATCCAAGGTCTCCTCCTAAACCTGGCCCGAGTGCATTTTGTTCACTTCGGGGACTCTTaGAGGCGGAAGGAGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLHYIQGLLLNLARVHFVHFGDS*RRKEVC Trigger: ACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGTG...AACAAAATGCACTCGGGCCAGGTTTAGGAGGAGACCTTGGATGTAATGCAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTAGAGGGCAGGGCAAGTaGGCTGTGTCCCTAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRRGQGK*AVSLRG Trigger: CCCTCTTAGGGACACAGCCAACTTGCCCTGCCCTCT...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGAGAGGGCAGGGCAAGTaGGCTGTGTCCCTAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMRGQGK*AVSLRG Trigger: CCCTCTTAGGGACACAGCCAACTTGCCCTGCCCTCT...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | AACAAGGCAGAGTTCAGAACCGAGCCCTGGGAGAAAAGCAGAAGAGAAACCACACTTCTCCAGCCTGCATaGGCCGCCGCTCTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: NKAEFRTEPWEKSRRETTLLQPA*AAALFN Trigger: GTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAAG...TGTGGTTTCTCTTCTGCTTTTCTCCCAGGGCTCGGTTCTGAACTCTGCCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | CTGTCGGGCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACAAGCCAGTGGCCATaGGCAGGCGAGGCCGTGACC | + |
|
Preference number: 5 (lower is better) Translates to: LSGFRRISTLSLPYTATKTSQWP*AGEAVT Trigger: GGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGT...TTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGCCCGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGGGCCGTCGTCTTCTCTaGGCCAAGGGCCTCATTATG | + |
|
Preference number: 5 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMGRRLL*AKGLIM Trigger: CATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCC...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGCTTCTCCAGCCTGCATaGGCCGCCGCTCTTTTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMLLQPA*AAALFN Trigger: GTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAAG...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTTCAGACAGGATGAGTTaGGGATGTGCCGTGTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SCICSRGWPSWSSMGGEVSDRMS*GCAVSG Trigger: CCCTGACACGGCACATCCCAAACTCATCCTGTCTGA...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | TGCCCAATATGGGTGCTAGAAAAGCAAACCCAGGTCCTCTGCAAGATCAGAATGCACTTCGGGGACTCTTaGAGGCGGAAGGAGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: CPIWVLEKQTQVLCKIRMHFGDS*RRKEVC Trigger: ACAGACCTCCTTCCGCCTCAAAGAGTCCCCGAAGTG...CATTCTGATCTTGCAGAGGACCTGGGTTTGCTTTTCTAGCACCCATATTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTACATTTCCCAGGGCATaGTCCCTGATTCTGCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SCICSRGWPSWSSMGGEVTFPRA*SLILLD Trigger: GTCCAGCAGAATCAGGGACAATGCCCTGGGAAATGT...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
||
| CDS-3UTR CAA 90 bp | GAGCCTGTAGCAGATCTAGTTCCTGTAGAGTCCAGCTGCCTTCCCATCTGCAAATCACTCCGGAGTTTCTaGAGGGCTTTGTGGAGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: EPVADLVPVESSCLPICKSLRSF*RALWSL Trigger: AAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGA...TTTGCAGATGGGAAGGCAGCTGGACTCTACAGGAACTAGATCTGCTACAGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | GCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCACAAGCCAGTGGCCATaGGCAGGCGAGGCCGTGACC | + |
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Preference number: 5 (lower is better) Translates to: ALDGYQLFPYLTLQLKLVTSQWP*AGEAVT Trigger: GGTCACGGCCTCGCCTGCCAATGGCCACTGGCTTGT...GACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS TCA 90 bp | AGACAGCCGACAAGCCAGGAACCACAGGGACTTGGTCTCTCCATATaGACTGACATCTTCCGTGAGTGTGGCATTACACACATTTTCCAC | + |
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Preference number: 5 (lower is better) Translates to: RQPTSQEPQGLGLSI*TDIFRECGITHIFH Trigger: GTGGAAAATGTGTGTAATGCCACACTCACGGAAGATGTCAGTTCATATGGAGAGACCAAGTCCCTGTGGTTCCTGGCTTGTCGGCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000138395.9 |
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| CDS CCA 90 bp | CCAATAATCATGGCCGTCGTCTTCTCTTGGCCAAGGGCCTCATTATaGATAGTGCAAGACACATTTCCCAGGGCATTGTCCCTGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: PIIMAVVFSWPRASL*IVQDTFPRALSLIL Trigger: CAGAATCAGGGACAATGCCCTGGGAAATGTGTCTTGCACTATCCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCCATGATTATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | AGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAGAGGTTTCACTCCGGAGTTTCTaGAGGGCTTTGTGGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: SCICSRGWPSWSSMGGEVSLRSF*RALWSL Trigger: AAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGA...AACCTCTCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | GTCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGTTGGTCATCAATGGGAGGAAGGAACCACAGGGACTaGGTCTCTCCATATGAACTG | + |
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Preference number: 5 (lower is better) Translates to: VSSCICSRGWPSWSSMGGRNHRD*VSPYEL Trigger: CAGTTCATATGGAGAGACCAAGTCCCTGTGGTTCCT...TCCTCCCATTGATGACCAACTAGGCCATCCTCTGCTACATATGCAGCTAGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138395.9 |
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| CDS-3UTR CAA 90 bp | TCTCGAAACTCTGCTGTAAACAGCCTGAAGAAAACAGAAACCCATGGAGTATTTAGAGGGCAGGGCAAGTaGGCTGTGTCCCTAAGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SRNSAVNSLKKTETHGVFRGQGK*AVSLRG Trigger: CCCTCTTAGGGACACAGCCAACTTGCCCTGCCCTCT...AAATACTCCATGGGTTTCTGTTTTCTTCAGGCTGTTTACAGCAGAGTTTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | CCCCTGCATTACATCCAAGGTCTCCTCCTAAACCTGGCCCGAGTGCATTTTGTTAGTCTTCCTTTTTCTTaGGCGTGGTCTTCCAGAAGA | + |
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Preference number: 5 (lower is better) Translates to: PLHYIQGLLLNLARVHFVSLPFS*AWSSRR Trigger: TCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACT...AACAAAATGCACTCGGGCCAGGTTTAGGAGGAGACCTTGGATGTAATGCAGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CCA 90 bp | CGGAGTTTCTTGAGGGCTTTGTGGAGTCTTCCTTTTTCTTTGGCGTaGTCTTCCAGAAGATTTTCTCCATCGCTTGCTCATACAGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RSFLRALWSLPFSLA*SSRRFSPSLAHTAA Trigger: AGCTGCTGTATGAGCAAGCGATGGAGAAAATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAAACTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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| CDS CCA 90 bp | CGGAGTTTCTTGAGGGCTTTGTGGAGTCTTCCTTTTTCTTTGGCGTaGTCTTCCAGAAGATTTTCTACCTCCATCGCTTGCTCATACAGC | + |
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Preference number: 5 (lower is better) Translates to: RSFLRALWSLPFSLA*SSRRFSTSIACSYS Trigger: GCTGTATGAGCAAGCGATGGAGGTAGAAAATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAAACTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | TGGCAAATTTTACATATCACTTTGACCCGTCACAAAGGTCCCAGACACTTGGTCTCACTCCGGAGTTTCTaGAGGGCTTTGTGGAGTCTT | + |
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Preference number: 5 (lower is better) Translates to: WQILHITLTRHKGPRHLVSLRSF*RALWSL Trigger: AAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGA...GACCAAGTGTCTGGGACCTTTGTGACGGGTCAAAGTGATATGTAAAATTTGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | CAGAGCTCCCTGGGACTAAATCACCAATCAAAGAAAACACAAGGAGGGACTCGTTCTTTTCCTTCTTGTTaGGGGACAATCGATTCCTCT | + |
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Preference number: 5 (lower is better) Translates to: QSSLGLNHQSKKTQGGTRSFPSC*GTIDSS Trigger: AGAGGAATCGATTGTCCCCAAACAAGAAGGAAAAGA...ACGAGTCCCTCCTTGTGTTTTCTTTGATTGGTGATTTAGTCCCAGGGAGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS-3UTR CAA 90 bp | GCTTTAGACGGATATCAACTCTTTCCCTACCTTACACTGCAACTAAAACTTGTCACTCCAAGAATCCATTaGGTCTTCTCGCCCACGTAC | + |
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Preference number: 5 (lower is better) Translates to: ALDGYQLFPYLTLQLKLVTPRIH*VFSPTY Trigger: GTACGTGGGCGAGAAGACCAAATGGATTCTTGGAGT...GACAAGTTTTAGTTGCAGTGTAAGGTAGGGAAAGAGTTGATATCCGTCTAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CCA 72 bp | AAGAGCCACCGCTGGAGAGGACAGACTTCCTCGTTCTaGGGCTCCAATAATCATGGCCGTCGTCTTCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: KSHRWRGQTSSF*GSNNHGRRLLL Trigger: CAAGAGAAGACGACGGCCATGATTATTGGAGCCCCAGAACGAGGAAGTCTGTCCTCTCCAGCGGTGGCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CCA 72 bp | CCACAAAATGTAGCCGGGCTCTTCTCCAGCCTGCATTaGCCGCCGCTCTTTTCAACTTCAGTTCACTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: PQNVAGLFSSLH*PPLFSTSVHSG Trigger: TCCGGAGTGAACTGAAGTTGAAAAGAGCGGCGGCCAATGCAGGCTGGAGAAGAGCCCGGCTACATTTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS GCA 72 bp | CAGGATGTAGCTTTCCTTGTGGGCATCCCTCACCAGTaGCGTCCTGCCCTTATATTCTGGCATCAGGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: QDVAFLVGIPHQ*RPALIFWHQVF Trigger: GAAGACCTGATGCCAGAATATAAGGGCAGGACGGCACTGGTGAGGGATGCCCACAAGGAAAGCTACATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030396.15 ENSMUST00000124626.9 ENSMUST00000133956.8 ENSMUST00000138395.9 ENSMUST00000141227.9 ENSMUST00000239029.2 |
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| CDS CAA 72 bp | GGATCAGAACCTAAAACTGCCACCTGCAGGGTCACGTaGTCTTCTCGACTTGAGTTTCCGACCCAGACCTGG | + |
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Preference number: 6 (lower is better) Translates to: GSEPKTATCRVT*SSRLEFPTQTW Trigger: CCAGGTCTGGGTCGGAAACTCAAGTCGAGAAGACAACGTGACCCTGCAGGTGGCAGTTTTAGGTTCTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000030396.15 ENSMUST00000133956.8 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS TCA 72 bp | ACTGCTGTTCGGAACAGCCCATTTTCATCCAGGGAGTaGACCTCTGAAAGGGAGAGTAGCGCTCTACCCGTA | + |
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Preference number: 6 (lower is better) Translates to: TAVRNSPFSSRE*TSERESSALPV Trigger: TACGGGTAGAGCGCTACTCTCCCTTTCAGAGGTTCACTCCCTGGATGAAAATGGGCTGTTCCGAACAGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS GCA 72 bp | AGCTTTCCTTGTGGGCATCCCTCACCAGTGCCGTCCTaGCCTTATATTCTGGCATCAGGTCTTCATCTCTGT | + |
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Preference number: 6 (lower is better) Translates to: SFPCGHPSPVPS*PYILASGLHLC Trigger: ACAGAGATGAAGACCTGATGCCAGAATATAAGGGCAGGACGGCACTGGTGAGGGATGCCCACAAGGAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000030396.15 ENSMUST00000124626.9 ENSMUST00000133956.8 ENSMUST00000138395.9 ENSMUST00000141227.9 ENSMUST00000239029.2 |
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| CDS CCA 72 bp | ATGGCCGTCGTCTTCTCTTGGCCAAGGGCCTCATTATaGATAGTGCAAGACACATTTCCCAGGGCATTGTCC | + |
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Preference number: 6 (lower is better) Translates to: MAVVFSWPRASL*IVQDTFPRALS Trigger: GGACAATGCCCTGGGAAATGTGTCTTGCACTATCCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CAA 90 bp | ACTTCCTCGTTCTGGGGCTCCAATAATCATGGCCGTCGTCTTCTCTaGGCCAAGGGCCTCATTATGGATAGTGCAAGACACATTTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TSSFWGSNNHGRRLL*AKGLIMDSARHISQ Trigger: CTGGGAAATGTGTCTTGCACTATCCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCCATGATTATTGGAGCCCCAGAACGAGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CAA 90 bp | GCATTGGCCGCCGCTCTTTTCAACTTCAGTTCACTCCGGAGTTTCTaGAGGGCTTTGTGGAGTCTTCCTTTTTCTTTGGCGTGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALAAALFNFSSLRSF*RALWSLPFSLAWSS Trigger: GGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGAACTGAAGTTGAAAAGAGCGGCGGCCAATGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CAA 72 bp | TTCTGGGGCTCCAATAATCATGGCCGTCGTCTTCTCTaGGCCAAGGGCCTCATTATGGATAGTGCAAGACAC | + |
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Preference number: 6 (lower is better) Translates to: FWGSNNHGRRLL*AKGLIMDSARH Trigger: GTGTCTTGCACTATCCATAATGAGGCCCTTGGCCAAGAGAAGACGACGGCCATGATTATTGGAGCCCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000030396.15 ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS TCA 72 bp | ACAAGCCAGGAACCACAGGGACTTGGTCTCTCCATATaGACTGACATCTTCCGTGAGTGTGGCATTACACAC | + |
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Preference number: 6 (lower is better) Translates to: TSQEPQGLGLSI*TDIFRECGITH Trigger: GTGTGTAATGCCACACTCACGGAAGATGTCAGTTCATATGGAGAGACCAAGTCCCTGTGGTTCCTGGCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000138395.9 |
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| CDS CAA 90 bp | GCCGCTCTTTTCAACTTCAGTTCACTCCGGAGTTTCTTGAGGGCTTaGTGGAGTCTTCCTTTTTCTTTGGCGTGGTCTTCCAGAAGATTT | + |
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Preference number: 6 (lower is better) Translates to: AALFNFSSLRSFLRA*WSLPFSLAWSSRRF Trigger: AAATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGAACTGAAGTTGAAAAGAGCGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CCA 72 bp | AACTTCAGTTCACTCCGGAGTTTCTTGAGGGCTTTGTaGAGTCTTCCTTTTTCTTTGGCGTGGTCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: NFSSLRSFLRAL*SLPFSLAWSSR Trigger: TCTGGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGAACTGAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CAA 72 bp | TTCAACTTCAGTTCACTCCGGAGTTTCTTGAGGGCTTaGTGGAGTCTTCCTTTTTCTTTGGCGTGGTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FNFSSLRSFLRA*WSLPFSLAWSS Trigger: GGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAAGAAACTCCGGAGTGAACTGAAGTTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000138395.9 ENSMUST00000239029.2 |
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| CDS CCA 72 bp | TTGAGGGCTTTGTGGAGTCTTCCTTTTTCTTTGGCGTaGTCTTCCAGAAGATTTTCTCCATCGCTTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LRALWSLPFSLA*SSRRFSPSLAH Trigger: ATGAGCAAGCGATGGAGAAAATCTTCTGGAAGACCACGCCAAAGAAAAAGGAAGACTCCACAAAGCCCTCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030396.15 |
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