Pregenerated sensors for ERLIN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025198Ensembl transcript IDs: ENSMUST00000071698.13, ENSMUST00000112028.10, ENSMUST00000170801.8, ENSMUST00000171952.2, ENSMUST00000172041.8
Found 201 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTAATCTTTCACAATGGCGCTTCCCTGCTCCTCACCGGGGCCTATaGCCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCAT | + |
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Preference number: 1 (lower is better) Translates to: FNLSQWRFPAPHRGL*PVRNPTTITLGQQH Trigger: ATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGGCCCCGGTGAGGAGCAGGGAAGCGCCATTGTGAAAGATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR TCA 90 bp | AACACATACAGGATACTTGATAAAACTGTGGCTGCAGAGACCGTTTaGGTGCCAGACAGCTGGGTCTATCCTGTAGTCAGCTGGCAAACC | + |
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Preference number: 1 (lower is better) Translates to: NTYRILDKTVAAETV*VPDSWVYPVVSWQT Trigger: GGTTTGCCAGCTGACTACAGGATAGACCCAGCTGTCTGGCACTCAAACGGTCTCTGCAGCCACAGTTTTATCAAGTATCCTGTATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 90 bp | TCTAAGCAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATaGGCTGGGACAGTGAGGTTGATGACATCACTGAATAGAGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: SKQLSVAKTGHFSHT*AGTVRLMTSLNRGN Trigger: GTTTCCTCTATTCAGTGATGTCATCAACCTCACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTGCTTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 90 bp | ATAATACTGTGCAGTGAATCAGGAATTGCACACTGCTCCTATGTCTaGTTAAAGCCCTGTCCCAGCTTTGGTCAGCCAAGAGGTGACATC | + |
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Preference number: 1 (lower is better) Translates to: IILCSESGIAHCSYV*LKPCPSFGQPRGDI Trigger: GATGTCACCTCTTGGCTGACCAAAGCTGGGACAGGGCTTTAACCAGACATAGGAGCAGTGTGCAATTCCTGATTCACTGCACAGTATTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 90 bp | AACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTaGCCCCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAG | + |
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Preference number: 1 (lower is better) Translates to: NPLAAVRSTAERFQK*PHYFSVWLQHSIHK Trigger: CTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGGGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 90 bp | TTAAGGAGAATCAGTGTGTTAGTGACCATAGCAGCCCTAGAACCTTaGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAAT | + |
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Preference number: 1 (lower is better) Translates to: LRRISVLVTIAALEP*PLDRSVGVNECAPN Trigger: ATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGTCACTAACACACTGATTCTCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR TCA 90 bp | ATCTCCTATAGCCACAGGCTAACTCTGTCATCTTCTCATGGAAAATaGATTCAATGGCTGCCCAGGAAGTCACAAGAATTCTTTCTGATC | + |
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Preference number: 1 (lower is better) Translates to: ISYSHRLTLSSSHGK*IQWLPRKSQEFFLI Trigger: GATCAGAAAGAATTCTTGTGACTTCCTGGGCAGCCATTGAATTCATTTTCCATGAGAAGATGACAGAGTTAGCCTGTGGCTATAGGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR TCA 90 bp | TTAGACTTAAAGATTACAGTGTATATTTACCAAAAGGAACGTCCCTaGAGGATGGTCAGACTTAGTTCACTGAGTGGGCACAGGGAAGCT | + |
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Preference number: 1 (lower is better) Translates to: LDLKITVYIYQKERP*RMVRLSSLSGHREA Trigger: AGCTTCCCTGTGCCCACTCAGTGAACTAAGTCTGACCATCCTTCAGGGACGTTCCTTTTGGTAAATATACACTGTAATCTTTAAGTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 90 bp | AAAAACAGAAAGGTACAATTTGTATCAAGTAAATGGTCATTCAACTaGAAGATAATTTCCTGGGAACCCAGAGGTCTGGCTGTCAATCAC | + |
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Preference number: 1 (lower is better) Translates to: KNRKVQFVSSKWSFN*KIISWEPRGLAVNH Trigger: GTGATTGACAGCCAGACCTCTGGGTTCCCAGGAAATTATCTTCCAGTTGAATGACCATTTACTTGATACAAATTGTACCTTTCTGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CAA 90 bp | AGCCCTGTCCCAGCTTTGGTCAGCCAAGAGGTGACATCTAAGCAGTaGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: SPVPALVSQEVTSKQ*SVAKTGHFSHTWAG Trigger: CCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTGCTTAGATGTCACCTCTTGGCTGACCAAAGCTGGGACAGGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGCAGAGACCGTTTGAGTaGCAGACAGCTGGGTCTATC | + |
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Preference number: 2 (lower is better) Translates to: VAKYASLQATNLTRKTERQRPFE*QTAGSI Trigger: GATAGACCCAGCTGTCTGGCACTCAAACGGTCTCTG...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGGGCAAACCAGGACTATaGCAAGAGAATCACAACAGA | + |
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Preference number: 2 (lower is better) Translates to: VAKYASLQATNLTRKTERGKPGL*QENHNR Trigger: TCTGTTGTGATTCTCTTGTCATAGTCCTGGTTTGCC...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGGGTCGCATCTTGATATaGGAGAACATTTCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: VAKYASLQATNLTRKTERGRILI*ENISTS Trigger: AGAGGTGGAAATGTTCTCCCATATCAAGATGCGACC...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACGGAAGGAGACAAAGATaGCTGAGGATGCTGTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: ETSLGMKAQSSVIQISHDGRRQR*LRMLSR Trigger: CCGAGACAGCATCCTCAGTCATCTTTGTCTCCTTCC...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAACACTGCTCCTATGTCTaGTTAAAGCCCTGTCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TIAALEPWPLDRSVGVNEHCSYV*LKPCPS Trigger: GCTGGGACAGGGCTTTAACCAGACATAGGAGCAGTG...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGAAGTGTTGGGGTGAATaGATGTGCCCCAAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: WKSNFGICIPGKETKMTEKCWGE*MCPKSS Trigger: ACTGGATTTGGGGCACATTCATTCACCCCAACACTT...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGAAGTGTTGGGGTGAATaGATGTGCCCCAAATCCAGT | + |
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Preference number: 2 (lower is better) Translates to: VWHNPLAAVRSTAERFQKKCWGE*MCPKSS Trigger: ACTGGATTTGGGGCACATTCATTCACCCCAACACTT...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACTGGCTGTCAATCACATaGAGGAATGCCGGGACTAGA | + |
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Preference number: 2 (lower is better) Translates to: ETSLGMKAQSSVIQISHDWLSIT*RNAGTR Trigger: TCTAGTCCCGGCATTCCTCCATGTGATTGACAGCCA...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGGCTGTCAATCACATaGAGGAATGCCGGGACTAGA | + |
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Preference number: 2 (lower is better) Translates to: TIAALEPWPLDRSVGVNEWLSIT*RNAGTR Trigger: TCTAGTCCCGGCATTCCTCCATGTGATTGACAGCCA...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGAGCGGAGGCGAAAGTTaGAAAAGCAACTTCGGTATC | + |
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Preference number: 2 (lower is better) Translates to: VWHNPLAAVRSTAERFQKSGGES*KSNFGI Trigger: GATACCGAAGTTGCTTTTCCAACTTTCGCCTCCGCT...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTCCTTGGGTCGCATCTTaGTATGGGAGAACATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSPWVAS*YGRTFP Trigger: TGGAAATGTTCTCCCATATCAAGATGCGACCCAAGG...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | CCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAATCCAGTTTGCAGGCCACCAACCTaGCTAGAAAAACAGAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PWPLDRSVGVNECAPNPVCRPPT*LEKQKG Trigger: ACCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCA...AACTGGATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGGGTCGCATCTTGATATaGGAGAACATTTCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: VWHNPLAAVRSTAERFQKGRILI*ENISTS Trigger: AGAGGTGGAAATGTTCTCCCATATCAAGATGCGACC...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACTGGAAGATAATTTCCTaGGAACCCAGAGGTCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: ETSLGMKAQSSVIQISHDWKIIS*EPRGLA Trigger: AGCCAGACCTCTGGGTTCCCAGGAAATTATCTTCCA...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATCACTGCTCCTATGTCTaGTTAAAGCCCTGTCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PQPSLWGNSISLNGNEKHHCSYV*LKPCPS Trigger: GCTGGGACAGGGCTTTAACCAGACATAGGAGCAGTG...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | GAGGATGCTGTCTCGGTCACTTTGTTCCACACTTCGAGAATTACTTTAAGGAGACCTTGGGTCGCATCTTaGTATGGGAGAACATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: EDAVSVTLFHTSRITLRRPWVAS*YGRTFP Trigger: TGGAAATGTTCTCCCATATCAAGATGCGACCCAAGG...TCTCCTTAAAGTAATTCTCGAAGTGTGGAACAAAGTGACCGAGACAGCATCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACGGCAAACCAGGACTATaGCAAGAGAATCACAACAGA | + |
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Preference number: 2 (lower is better) Translates to: ETSLGMKAQSSVIQISHDGKPGL*QENHNR Trigger: TCTGTTGTGATTCTCTTGTCATAGTCCTGGTTTGCC...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACATAGAAGTGTTGGGGTaGATGAATGTGCCCCAAATC | + |
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Preference number: 2 (lower is better) Translates to: ETSLGMKAQSSVIQISHDIEVLG*MNVPQI Trigger: GATTTGGGGCACATTCATTCACCCCAACACTTCTAT...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAGGAAGGAGACAAAGATaGCTGAGGATGCTGTCTCGG | + |
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Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSGRRQR*LRMLSR Trigger: CCGAGACAGCATCCTCAGTCATCTTTGTCTCCTTCC...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCACAGAGACCGTTTGAGTaGCAGACAGCTGGGTCTATC | + |
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Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSQRPFE*QTAGSI Trigger: GATAGACCCAGCTGTCTGGCACTCAAACGGTCTCTG...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTAGTGACCATAGCCAGAGACCGTTTGAGTaGCAGACAGCTGGGTCTATC | + |
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Preference number: 2 (lower is better) Translates to: VPHFENYFKENQCVSDHSQRPFE*QTAGSI Trigger: GATAGACCCAGCTGTCTGGCACTCAAACGGTCTCTG...GCTATGGTCACTAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAATCCAGTTGGTCGCATCTTGATATaGGAGAACATTTCCACCTCT | + |
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Preference number: 2 (lower is better) Translates to: PWPLDRSVGVNECAPNPVGRILI*ENISTS Trigger: AGAGGTGGAAATGTTCTCCCATATCAAGATGCGACC...AACTGGATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATCACTTTAGTCACACATaGGCTGGGACAGTGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PQPSLWGNSISLNGNEKHHFSHT*AGTVRL Trigger: CAACCTCACTGTCCCAGCCCATGTGTGACTAAAGTG...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CAA 90 bp | CCAGGGAAGGAGACAAAGATGACTGAGGATGCTGTCTCGGTCACTTaGTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: PGKETKMTEDAVSVT*FHTSRITLRRISVL Trigger: TAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAACAAAGTGACCGAGACAGCATCCTCAGTCATCTTTGTCTCCTTCCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGCAGGCCACCAACCTaGCTAGAAAAACAGAAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PLLFCLASTQYTQELSTSCRPPT*LEKQKG Trigger: ACCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCA...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR GCA 90 bp | ACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGGGCTGTTTGACATTCCAGTaGAGGCAGTATCTTAGCATC | + |
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Preference number: 2 (lower is better) Translates to: TFLSGFNTVYTRAVNKLGCLTFQ*RQYLSI Trigger: GATGCTAAGATACTGCCTGCACTGGAATGTCAAACA...GCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAAGCAACTTCGGTATCTaGATCCCAGGGAAGGAGACA | + |
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Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSSNFGI*IPGKET Trigger: TGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCT...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCAAATGGTCATTCAACTaGAAGATAATTTCCTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HNPLAAVRSTAERFQKWPKWSFN*KIISWE Trigger: TTCCCAGGAAATTATCTTCCAGTTGAATGACCATTT...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCACACTTTAGTCACACATaGGCTGGGACAGTGAGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSHFSHT*AGTVRL Trigger: CAACCTCACTGTCCCAGCCCATGTGTGACTAAAGTG...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR TCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATTCTTCTCATGGAAAATaGATTCAATGGCTGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: PQPSLWGNSISLNGNEKHSSHGK*IQWLPR Trigger: CCTGGGCAGCCATTGAATTCATTTTCCATGAGAAGA...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTAGTGACCATAGCTGGAAGATAATTTCCTaGGAACCCAGAGGTCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VPHFENYFKENQCVSDHSWKIIS*EPRGLA Trigger: AGCCAGACCTCTGGGTTCCCAGGAAATTATCTTCCA...GCTATGGTCACTAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR TCA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGCCTTGGGTCGCATCTTaGTATGGGAGAACATTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: QSSFICSNNVTPVFEGPKPWVAS*YGRTFP Trigger: TGGAAATGTTCTCCCATATCAAGATGCGACCCAAGG...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR TCA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGTGCAGGCCACCAACCTaGCTAGAAAAACAGAAAGGT | + |
|
Preference number: 2 (lower is better) Translates to: QSSFICSNNVTPVFEGPKCRPPT*LEKQKG Trigger: ACCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCA...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCATCTTCTCATGGAAAATaGATTCAATGGCTGCCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSSSHGK*IQWLPR Trigger: CCTGGGCAGCCATTGAATTCATTTTCCATGAGAAGA...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTCTGTCATCTTCTCATaGAAAATGAATTCAATGGCT | + |
|
Preference number: 2 (lower is better) Translates to: VWHNPLAAVRSTAERFQKSVIFS*KMNSMA Trigger: AGCCATTGAATTCATTTTCCATGAGAAGATGACAGA...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR TCA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGATAGAAGTGTTGGGGTaGATGAATGTGCCCCAAATC | + |
|
Preference number: 2 (lower is better) Translates to: QSSFICSNNVTPVFEGPKIEVLG*MNVPQI Trigger: GATTTGGGGCACATTCATTCACCCCAACACTTCTAT...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCATGTTTGACATTCCAGTaGAGGCAGTATCTTAGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSCLTFQ*RQYLSI Trigger: GATGCTAAGATACTGCCTGCACTGGAATGTCAAACA...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR GCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACTATGACATAATACTGTaGAGTGAATCAGGAATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: ETSLGMKAQSSVIQISHDYDIIL*SESGIA Trigger: TGCAATTCCTGATTCACTGCACAGTATTATGTCATA...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGGCCTAGGGAAAACCCCCATTCAAATCTGGGCTTTACTTTCTTAATAAAATGGAAGATAATTTCCTaGGAACCCAGAGGTCTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IRPRENPHSNLGFTFLIKWKIIS*EPRGLA Trigger: AGCCAGACCTCTGGGTTCCCAGGAAATTATCTTCCA...TTTTATTAAGAAAGTAAAGCCCAGATTTGAATGGGGGTTTTCCCTAGGCCTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAAAAATGGTCATTCAACTaGAAGATAATTTCCTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TIAALEPWPLDRSVGVNEKWSFN*KIISWE Trigger: TTCCCAGGAAATTATCTTCCAGTTGAATGACCATTT...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCAAATGGTCATTCAACTaGAAGATAATTTCCTGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: PLLFCLASTQYTQELSTSKWSFN*KIISWE Trigger: TTCCCAGGAAATTATCTTCCAGTTGAATGACCATTT...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCATATGACATAATACTGTaGAGTGAATCAGGAATTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SPYYKCLYTIRPRENPHSYDIIL*SESGIA Trigger: TGCAATTCCTGATTCACTGCACAGTATTATGTCATA...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR TCA 72 bp | TCACAATGGCGCTTCCCTGCTCCTCACCGGGGCCTATaGCCGGTAAGAAATCCCACAACCATCACTTTGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SQWRFPAPHRGL*PVRNPTTITLG Trigger: CCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGGCCCCGGTGAGGAGCAGGGAAGCGCCATTGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGTTCCCACTTAGCCCCTaGGGTCGCATCTTGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVFPLSP*GRILIW Trigger: CCATATCAAGATGCGACCCAAGGGGCTAAGTGGGAA...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAACAAGCTGGGCAGATTCAGGTCTACCTGTGCAGCACAATATTCCAGGAAGGCTGCAGAGACCGTTaGAGTGCCAGACAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: CQQAGQIQVYLCSTIFQEGCRDR*SARQLG Trigger: ACCCAGCTGTCTGGCACTCAAACGGTCTCTGCAGCC...TTCCTGGAATATTGTGCTGCACAGGTAGACCTGAATCTGCCCAGCTTGTTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCGGCTGCAGAGACCGTTaGAGTGCCAGACAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLLFCLASTQYTQELSTSGCRDR*SARQLG Trigger: ACCCAGCTGTCTGGCACTCAAACGGTCTCTGCAGCC...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATTCCCACTTAGCCCCTaGGGTCGCATCTTGATATGG | + |
|
Preference number: 3 (lower is better) Translates to: TIAALEPWPLDRSVGVNEFPLSP*GRILIW Trigger: CCATATCAAGATGCGACCCAAGGGGCTAAGTGGGAA...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTAGTGACCATAGCGGCTGCAGAGACCGTTaGAGTGCCAGACAGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: VPHFENYFKENQCVSDHSGCRDR*SARQLG Trigger: ACCCAGCTGTCTGGCACTCAAACGGTCTCTGCAGCC...GCTATGGTCACTAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR CCA 72 bp | TTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATaGGCTGGGACAGTGAGGTTGATGACATCACTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LSVAKTGHFSHT*AGTVRLMTSLN Trigger: ATTCAGTGATGTCATCAACCTCACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR CCA 72 bp | GCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTaGCCCCATTACTTTTCTGTCTGGCTTCAACACAGT | + |
|
Preference number: 3 (lower is better) Translates to: AAVRSTAERFQK*PHYFSVWLQHS Trigger: ACTGTGTTGAAGCCAGACAGAAAAGTAATGGGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR TCA 72 bp | TTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTaGGAGGTTTCAGAAGTGGCCCCATTACTTTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LAQPFSCCEINS*EVSEVAPLLFC Trigger: ACAGAAAAGTAATGGGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CAA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCCCCTTGGGTCGCATCTaGATATGGGAGAACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PLLFCLASTQYTQELSTSPLGRI*IWENIS Trigger: GGAAATGTTCTCCCATATCAAGATGCGACCCAAGGG...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CAA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATCCCTTGGGTCGCATCTaGATATGGGAGAACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PQPSLWGNSISLNGNEKHPLGRI*IWENIS Trigger: GGAAATGTTCTCCCATATCAAGATGCGACCCAAGGG...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CAA 90 bp | CCTATGACCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCATTTCACACACATACAGGATACTaGATAAAACTGTGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PMTGKKSHNHHFGATAFHTHTGY*IKLWLQ Trigger: CTGCAGCCACAGTTTTATCAAGTATCCTGTATGTGT...GTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR GCA 72 bp | GACATAATACTGTGCAGTGAATCAGGAATTGCACACTaGTCCTATGTCTGGTTAAAGCCCTGTCCCAGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: DIILCSESGIAH*SYVWLKPCPSF Trigger: AAAGCTGGGACAGGGCTTTAACCAGACATAGGAGCAGTGTGCAATTCCTGATTCACTGCACAGTATTATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 72 bp | GCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTaGGCAGATTCAGGTCTACCTGTGCAGCACAATATT | + |
|
Preference number: 3 (lower is better) Translates to: ASTQYTQELSTS*ADSGLPVQHNI Trigger: AATATTGTGCTGCACAGGTAGACCTGAATCTGCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CAA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCACCCTTGGGTCGCATCTaGATATGGGAGAACATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SPYYKCLYTIRPRENPHSPLGRI*IWENIS Trigger: GGAAATGTTCTCCCATATCAAGATGCGACCCAAGGG...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR-3UTR CAA 90 bp | CCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAATCCAGTTACACATACAGGATACTaGATAAAACTGTGGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PWPLDRSVGVNECAPNPVTHTGY*IKLWLQ Trigger: CTGCAGCCACAGTTTTATCAAGTATCCTGTATGTGT...AACTGGATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR TCA 72 bp | AGCCACAGGCTAACTCTGTCATCTTCTCATGGAAAATaGATTCAATGGCTGCCCAGGAAGTCACAAGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: SHRLTLSSSHGK*IQWLPRKSQEF Trigger: GAATTCTTGTGACTTCCTGGGCAGCCATTGAATTCATTTTCCATGAGAAGATGACAGAGTTAGCCTGTGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 72 bp | ATCAGTGTGTTAGTGACCATAGCAGCCCTAGAACCTTaGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGT | + |
|
Preference number: 3 (lower is better) Translates to: ISVLVTIAALEP*PLDRSVGVNEC Trigger: ACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGTCACTAACACACTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| 3UTR CCA 72 bp | GAGAGGTTTCAGAAGTGGCCCCATTACTTTTCTGTCTaGCTTCAACACAGTATACACAAGAGCTGTCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: ERFQKWPHYFSV*LQHSIHKSCQQ Trigger: TTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGGGGCCACTTCTGAAACCTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTAGTGACCATAGCGCTGGGACAGTGAGGTaGATGACATCACTGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: VPHFENYFKENQCVSDHSAGTVR*MTSLNR Trigger: TCTATTCAGTGATGTCATCAACCTCACTGTCCCAGC...GCTATGGTCACTAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAGCTGGGACAGTGAGGTaGATGACATCACTGAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: SPYYKCLYTIRPRENPHSAGTVR*MTSLNR Trigger: TCTATTCAGTGATGTCATCAACCTCACTGTCCCAGC...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR TCA 72 bp | ATGACAAGAGAATCACAACAGAGCACACATTCTCTGTaGATCTTACGAGTCCACATAACCACTGTTCCCACT | + |
|
Preference number: 3 (lower is better) Translates to: MTRESQQSTHSL*ILRVHITTVPT Trigger: AGTGGGAACAGTGGTTATGTGGACTCGTAAGATTCACAGAGAATGTGTGCTCTGTTGTGATTCTCTTGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR TCA 72 bp | AAGATTACAGTGTATATTTACCAAAAGGAACGTCCCTaGAGGATGGTCAGACTTAGTTCACTGAGTGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: KITVYIYQKERP*RMVRLSSLSGH Trigger: GTGCCCACTCAGTGAACTAAGTCTGACCATCCTTCAGGGACGTTCCTTTTGGTAAATATACACTGTAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR GCA 72 bp | AGTGATCCAGATATCCCACGACAATCATCATTTATCTaGAGCAACAATGTAACACCAGTATTTGAAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: SDPDIPRQSSFI*SNNVTPVFEGP Trigger: TGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTGTCGTGGGATATCTGGATCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR TCA 72 bp | ATCATTTATCTGCAGCAACAATGTAACACCAGTATTTaGAGGGCCAAAGAACACAAAATCTGTTTGAAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: IIYLQQQCNTSI*RAKEHKICLKV Trigger: TACCTTCAAACAGATTTTGTGTTCTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGCACCAACCCCACCACTaGAGCCACCAGAAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVHQPHH*SHQKPG Trigger: GCCCGGCTTCTGGTGGCTGCAGTGGTGGGGTTGGTG...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGCACCAACCCCACCACTaGAGCCACCAGAAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WKSNFGICIPGKETKMTEHQPHH*SHQKPG Trigger: GCCCGGCTTCTGGTGGCTGCAGTGGTGGGGTTGGTG...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGCTCGGCATCTGCTTTTaGCTTCTCTCGGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VAKYASLQATNLTRKTERLGICF*LLSGQE Trigger: TTCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAG...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCCTCGGCATCTGCTTTTaGCTTCTCTCGGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HNPLAAVRSTAERFQKWPLGICF*LLSGQE Trigger: TTCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAG...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGCTTCGATCTTGTGGATaGAGGCGTACAGGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: VAKYASLQATNLTRKTERLRSCG*RRTGGS Trigger: CGATCCTCCTGTACGCCTCCATCCACAAGATCGAAG...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGAGGAGTCCACAAACATaGTGGGGATGTTGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAKYASLQATNLTRKTERRSPQT*WGCCCQ Trigger: TTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCT...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCTCTCCTTGTTTTGGATaGGGCTCTCTCCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HNPLAAVRSTAERFQKWPSPCFG*GSLQRA Trigger: AGCCCTCTGGAGAGAGCCCCATCCAAAACAAGGAGA...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCGCGTTCTCCTTGTTTTaGATGGGGCTCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HNPLAAVRSTAERFQKWPAFSLF*MGLSPE Trigger: CTCTGGAGAGAGCCCCATCCAAAACAAGGAGAACGC...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGGATAGCCTGGTCCACTaGGGCTCGTTAGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WKSNFGICIPGKETKMTEDSLVH*GSLAKL Trigger: GAGCTTTGCTAACGAGCCCCAGTGGACCAGGCTATC...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGTGTGCTTGTTTGAGGTaGCGTATTTGTGTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAKYASLQATNLTRKTERCACLR*RICVQR Trigger: ACGCTGCACACAAATACGCCACCTCAAACAAGCACA...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGAGTCCACAAACATGCTaGGGATGTTGCTGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVSPQTC*GCCCQS Trigger: ACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACT...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR CAA 72 bp | GGGCACTTTAGTCACACATGGGCTGGGACAGTGAGGTaGATGACATCACTGAATAGAGGAAACACAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GHFSHTWAGTVR*MTSLNRGNTGT Trigger: GGTCCCTGTGTTTCCTCTATTCAGTGATGTCATCAACCTCACTGTCCCAGCCCATGTGTGACTAAAGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGGGTCAATATAGATCATaGCTCCACCACTTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVGQYRS*LHHLFH Trigger: GTGGAACAAGTGGTGGAGTCATGATCTATATTGACC...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGCACCAACCCCACCACTaGAGCCACCAGAAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSSFICSNNVTPVFEGPKHQPHH*SHQKPG Trigger: GCCCGGCTTCTGGTGGCTGCAGTGGTGGGGTTGGTG...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAATTCTATGTAAACTTCTTGAAGTGTGTGGGCACTGCAAAACTGGTTCACACCAACCCCACCACTaGAGCCACCAGAAGCCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTILCKLLEVCGHCKTGSHQPHH*SHQKPG Trigger: GCCCGGCTTCTGGTGGCTGCAGTGGTGGGGTTGGTG...TGAACCAGTTTTGCAGTGCCCACACACTTCAAGAAGTTTACATAGAATTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171952.2 |
||
| CDS-3UTR GCA 90 bp | ACCCGTAGCTTTGGTGCAGTGCAGGCTTTATCTCCCTTAAATTTCAGCTGCTTTCTCGGCATCTGCTTTTaGCTTCTCTCGGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TRSFGAVQALSPLNFSCFLGICF*LLSGQE Trigger: TTCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAG...AAAGCAGCTGAAATTTAAGGGAGATAAAGCCTGCACTGCACCAAAGCTACGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CCTATGACCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCATTTCACCTTCGATCTTGTGGATaGAGGCGTACAGGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: PMTGKKSHNHHFGATAFHLRSCG*RRTGGS Trigger: CGATCCTCCTGTACGCCTCCATCCACAAGATCGAAG...GTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAACCCTCTTCGATCTTGTaGATGGAGGCGTACAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TIAALEPWPLDRSVGVNEPSSIL*MEAYRR Trigger: CCTCCTGTACGCCTCCATCCACAAGATCGAAGAGGG...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | ACCCGTAGCTTTGGTGCAGTGCAGGCTTTATCTCCCTTAAATTTCAGCTGCTTTGATAGCCTGGTCCACTaGGGCTCGTTAGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRSFGAVQALSPLNFSCFDSLVH*GSLAKL Trigger: GAGCTTTGCTAACGAGCCCCAGTGGACCAGGCTATC...AAAGCAGCTGAAATTTAAGGGAGATAAAGCCTGCACTGCACCAAAGCTACGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAACAAGCTGGGCAGATTCAGGTCTACCTGTGCAGCACAATATTCCAGGAATCTCCTTGTTTTGGATaGGGCTCTCTCCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQQAGQIQVYLCSTIFQESPCFG*GSLQRA Trigger: AGCCCTCTGGAGAGAGCCCCATCCAAAACAAGGAGA...TTCCTGGAATATTGTGCTGCACAGGTAGACCTGAATCTGCCCAGCTTGTTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| 3UTR CAA 72 bp | CCAGCTTTGGTCAGCCAAGAGGTGACATCTAAGCAGTaGTCTGTGGCTAAAACCGGGCACTTTAGTCACACA | + |
|
Preference number: 4 (lower is better) Translates to: PALVSQEVTSKQ*SVAKTGHFSHT Trigger: TGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTGCTTAGATGTCACCTCTTGGCTGACCAAAGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTTGGCCTGGTATTTCTTaGGCTCCAGATACTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSWPGIS*APDTLG Trigger: CCCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCA...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGGGCTGGCCTGGTATTTCTTaGGCTCCAGATACTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TFLSGFNTVYTRAVNKLGWPGIS*APDTLG Trigger: CCCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCA...GCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CCTATGACCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCATTTCACGTAATACTCGGCATCTaGTTTTGCCTTCTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PMTGKKSHNHHFGATAFHVILGI*FCLLSG Trigger: GCCCGAGAGAAGGCAAAAGCAGATGCCGAGTATTAC...GTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTCTTCGATCTTGTGGATaGAGGCGTACAGGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSLRSCG*RRTGGS Trigger: CGATCCTCCTGTACGCCTCCATCCACAAGATCGAAG...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCTTTGAGGCAATGGCCTaGTATTTCTTGAGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HNPLAAVRSTAERFQKWPFEAMA*YFLSSR Trigger: TCTGGAGCTCAAGAAATACCAGGCCATTGCCTCAAA...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACTCTCCTTGTTTTGGATaGGGCTCTCTCCAGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGMKAQSSVIQISHDSPCFG*GSLQRA Trigger: AGCCCTCTGGAGAGAGCCCCATCCAAAACAAGGAGA...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGAGTCTTGTCGTAGTCTaGAGTATAGTTCCTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVSLVVV*SIVPHN Trigger: ATTGTGAGGAACTATACTGCAGACTACGACAAGACT...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGGAAGTGTGTGGGCACTaGAAAACTGGTTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VWHNPLAAVRSTAERFQKEVCGH*KTGSAH Trigger: ATGAGCTGAACCAGTTTTGCAGTGCCCACACACTTC...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGAGTCCACAAACATGCTaGGGATGTTGCTGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VWHNPLAAVRSTAERFQKSPQTC*GCCCQS Trigger: ACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACT...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTCAGTTTGTGCTTGTTTaGGGTGGCGTATTTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSQFVLV*GGVFVC Trigger: GCACACAAATACGCCACCTCAAACAAGCACAAACTG...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGGGCCAGTTTGTGCTTGTTTaGGGTGGCGTATTTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLSGFNTVYTRAVNKLGQFVLV*GGVFVC Trigger: GCACACAAATACGCCACCTCAAACAAGCACAAACTG...GCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGCTGGGGATGTTGCTaGCAAAGTAGATCTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWHNPLAAVRSTAERFQKCWGCC*QSRSYC Trigger: ACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCA...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR GCA 90 bp | GAGGATGCTGTCTCGGTCACTTTGTTCCACACTTCGAGAATTACTTTAAGGAGAAGGAGTCCACAAACATaGTGGGGATGTTGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EDAVSVTLFHTSRITLRRRSPQT*WGCCCQ Trigger: TTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCT...TCTCCTTAAAGTAATTCTCGAAGTGTGGAACAAAGTGACCGAGACAGCATCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAGATAGCCTGGTCCACTaGGGCTCGTTAGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPYYKCLYTIRPRENPHSDSLVH*GSLAKL Trigger: GAGCTTTGCTAACGAGCCCCAGTGGACCAGGCTATC...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAATCCAGTTTGTGCTTGTTTGAGGTaGCGTATTTGTGTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PWPLDRSVGVNECAPNPVCACLR*RICVQR Trigger: ACGCTGCACACAAATACGCCACCTCAAACAAGCACA...AACTGGATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTAGTCCACAAACATGCTaGGGATGTTGCTGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSSPQTC*GCCCQS Trigger: ACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACT...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATGCGTTCTCCTTGTTTTaGATGGGGCTCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSLWGNSISLNGNEKHAFSLF*MGLSPE Trigger: CTCTGGAGAGAGCCCCATCCAAAACAAGGAGAACGC...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAATCCAGTTGGTCAATATAGATCATaGCTCCACCACTTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PWPLDRSVGVNECAPNPVGQYRS*LHHLFH Trigger: GTGGAACAAGTGGTGGAGTCATGATCTATATTGACC...AACTGGATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | GAAACATCTCTAGGAATGAAAGCACAGAGCTCAGTGATCCAGATATCCCACGACGGTCAATATAGATCATaGCTCCACCACTTGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETSLGMKAQSSVIQISHDGQYRS*LHHLFH Trigger: GTGGAACAAGTGGTGGAGTCATGATCTATATTGACC...GTCGTGGGATATCTGGATCACTGAGCTCTGTGCTTTCATTCCTAGAGATGTTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAACAAGCTGGGCAGATTCAGGTCTACCTGTGCAGCACAATATTCCAGGAAGTAGATCTTACTGTTTaGGGCAATGGCCTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: CQQAGQIQVYLCSTIFQEVDLTV*GNGLVF Trigger: AAATACCAGGCCATTGCCTCAAACAGTAAGATCTAC...TTCCTGGAATATTGTGCTGCACAGGTAGACCTGAATCTGCCCAGCTTGTTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATGTAATACTCGGCATCTaGTTTTGCCTTCTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQPSLWGNSISLNGNEKHVILGI*FCLLSG Trigger: GCCCGAGAGAAGGCAAAAGCAGATGCCGAGTATTAC...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ACCCGTAGCTTTGGTGCAGTGCAGGCTTTATCTCCCTTAAATTTCAGCTGCTTTTGCTGGGGATGTTGCTaGCAAAGTAGATCTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TRSFGAVQALSPLNFSCFCWGCC*QSRSYC Trigger: ACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCA...AAAGCAGCTGAAATTTAAGGGAGATAAAGCCTGCACTGCACCAAAGCTACGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATAGGAGTCCACAAACATaGTGGGGATGTTGCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PQPSLWGNSISLNGNEKHRSPQT*WGCCCQ Trigger: TTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCT...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAATTCTATGTAAACTTCTTGAAGTGTGTGGGCACTGCAAAACTGGTTCAGATAGCCTGGTCCACTaGGGCTCGTTAGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTILCKLLEVCGHCKTGSDSLVH*GSLAKL Trigger: GAGCTTTGCTAACGAGCCCCAGTGGACCAGGCTATC...TGAACCAGTTTTGCAGTGCCCACACACTTCAAGAAGTTTACATAGAATTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171952.2 |
||
| CDS-3UTR CCA 90 bp | ACCCGTAGCTTTGGTGCAGTGCAGGCTTTATCTCCCTTAAATTTCAGCTGCTTTTTTGAGGCAATGGCCTaGTATTTCTTGAGCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRSFGAVQALSPLNFSCFFEAMA*YFLSSR Trigger: TCTGGAGCTCAAGAAATACCAGGCCATTGCCTCAAA...AAAGCAGCTGAAATTTAAGGGAGATAAAGCCTGCACTGCACCAAAGCTACGGGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAGCGTTCTCCTTGTTTTaGATGGGGCTCTCTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPYYKCLYTIRPRENPHSAFSLF*MGLSPE Trigger: CTCTGGAGAGAGCCCCATCCAAAACAAGGAGAACGC...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGTGGCCTGGTATTTCTTaGGCTCCAGATACTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSFICSNNVTPVFEGPKWPGIS*APDTLG Trigger: CCCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCA...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | ACCCGTAGCTTTGGTGCAGTGCAGGCTTTATCTCCCTTAAATTTCAGCTGCTTTGTAGATCTTACTGTTTaGGGCAATGGCCTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TRSFGAVQALSPLNFSCFVDLTV*GNGLVF Trigger: AAATACCAGGCCATTGCCTCAAACAGTAAGATCTAC...AAAGCAGCTGAAATTTAAGGGAGATAAAGCCTGCACTGCACCAAAGCTACGGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCGAAGTGTGTGGGCACTaGAAAACTGGTTCAGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLLFCLASTQYTQELSTSEVCGH*KTGSAH Trigger: ATGAGCTGAACCAGTTTTGCAGTGCCCACACACTTC...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTCTTTTTGCAGGGCCTaGTTCAGGTTTTCATCTATT | + |
|
Preference number: 4 (lower is better) Translates to: VWHNPLAAVRSTAERFQKSFCRA*FRFSSI Trigger: AATAGATGAAAACCTGAAGCAGGCCCTGCAAAAAGA...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAATTCTATGTAAACTTCTTGAAGTGTGTGGGCACTGCAAAACTGGTTCACTTCGATCTTGTGGATaGAGGCGTACAGGAGGATCG | + |
|
Preference number: 4 (lower is better) Translates to: QTILCKLLEVCGHCKTGSLRSCG*RRTGGS Trigger: CGATCCTCCTGTACGCCTCCATCCACAAGATCGAAG...TGAACCAGTTTTGCAGTGCCCACACACTTCAAGAAGTTTACATAGAATTGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171952.2 |
||
| CDS-3UTR CCA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCGAGCTCCAGATACTCTaGGGTCAGTTTGTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PLLFCLASTQYTQELSTSELQIL*GQFVLV Trigger: AACAAGCACAAACTGACCCCAGAGTATCTGGAGCTC...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATGAGCTCCAGATACTCTaGGGTCAGTTTGTGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PQPSLWGNSISLNGNEKHELQIL*GQFVLV Trigger: AACAAGCACAAACTGACCCCAGAGTATCTGGAGCTC...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGGTTTGTAGTGTTGTCTaGACAGATCTGAATGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WKSNFGICIPGKETKMTEVCSVV*TDLNVV Trigger: TACAACATTCAGATCTGTGCAGACAACACTACAAAC...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGGGCAGTCTTGTCGTAGTCTaGAGTATAGTTCCTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFLSGFNTVYTRAVNKLGSLVVV*SIVPHN Trigger: ATTGTGAGGAACTATACTGCAGACTACGACAAGACT...GCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATCTTTTTGCAGGGCCTaGTTCAGGTTTTCATCTATT | + |
|
Preference number: 4 (lower is better) Translates to: TIAALEPWPLDRSVGVNESFCRA*FRFSSI Trigger: AATAGATGAAAACCTGAAGCAGGCCCTGCAAAAAGA...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGGGCTCTTTTTGCAGGGCCTaGTTCAGGTTTTCATCTATT | + |
|
Preference number: 4 (lower is better) Translates to: TFLSGFNTVYTRAVNKLGSFCRA*FRFSSI Trigger: AATAGATGAAAACCTGAAGCAGGCCCTGCAAAAAGA...GCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ACCATAGCAGCCCTAGAACCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAAGTGTTTAAATCTTTTTaGAGGGCCTGCTTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TIAALEPWPLDRSVGVNEVFKSF*RACFRF Trigger: AAACCTGAAGCAGGCCCTGCAAAAAGATTTAAACAC...TTCATTCACCCCAACACTTCTATCTAAAGGCCAAGGTTCTAGGGCTGCTATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAACAAGCTGGGCAGATTCAGGTCTACCTGTGCAGCACAATATTCCAGGAATTGTGCAATCTTCTCTaGTTCTATAACAGCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CQQAGQIQVYLCSTIFQELCNLL*FYNSPF Trigger: AAAAGGGCTGTTATAGAAGCAGAGAAGATTGCACAA...TTCCTGGAATATTGTGCTGCACAGGTAGACCTGAATCTGCCCAGCTTGTTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTCACCTTTTGTTTCTGTaGAGCTATGAGAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSHLLFL*SYEKFC Trigger: ACAAAACTTCTCATAGCTGCACAGAAACAAAAGGTG...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ACCCGTAGCTTTGGTGCAGTGCAGGCTTTATCTCCCTTAAATTTCAGCTGCTTTTTGTGCAATCTTCTCTaGTTCTATAACAGCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TRSFGAVQALSPLNFSCFLCNLL*FYNSPF Trigger: AAAAGGGCTGTTATAGAAGCAGAGAAGATTGCACAA...AAAGCAGCTGAAATTTAAGGGAGATAAAGCCTGCACTGCACCAAAGCTACGGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CCA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGTGTGCTTGTTTGAGGTaGCGTATTTGTGTGCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSFICSNNVTPVFEGPKCACLR*RICVQR Trigger: ACGCTGCACACAAATACGCCACCTCAAACAAGCACA...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAAGTCTTGTCGTAGTCTaGAGTATAGTTCCTCACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPYYKCLYTIRPRENPHSSLVVV*SIVPHN Trigger: ATTGTGAGGAACTATACTGCAGACTACGACAAGACT...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAGTGTTTAAATCTTTTTaGAGGGCCTGCTTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPYYKCLYTIRPRENPHSVFKSF*RACFRF Trigger: AAACCTGAAGCAGGCCCTGCAAAAAGATTTAAACAC...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CCATTACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCCACCTTTTGTTTCTGTaGAGCTATGAGAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLLFCLASTQYTQELSTSHLLFL*SYEKFC Trigger: ACAAAACTTCTCATAGCTGCACAGAAACAAAAGGTG...GCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGTAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGGCCTAGGGAAAACCCCCATTCAAATCTGGGCTTTACTTTCTTAATAAAATGCTGGGGATGTTGCTaGCAAAGTAGATCTTACTGT | + |
|
Preference number: 4 (lower is better) Translates to: IRPRENPHSNLGFTFLIKCWGCC*QSRSYC Trigger: ACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCA...TTTTATTAAGAAAGTAAAGCCCAGATTTGAATGGGGGTTTTCCCTAGGCCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGGCCTAGGGAAAACCCCCATTCAAATCTGGGCTTTACTTTCTTAATAAAAGTAGATCTTACTGTTTaGGGCAATGGCCTGGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: IRPRENPHSNLGFTFLIKVDLTV*GNGLVF Trigger: AAATACCAGGCCATTGCCTCAAACAGTAAGATCTAC...TTTTATTAAGAAAGTAAAGCCCAGATTTGAATGGGGGTTTTCCCTAGGCCTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTAGTGACCATAGCCACCTTTTGTTTCTGTaGAGCTATGAGAAGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VPHFENYFKENQCVSDHSHLLFL*SYEKFC Trigger: ACAAAACTTCTCATAGCTGCACAGAAACAAAAGGTG...GCTATGGTCACTAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCATTGTGCAATCTTCTCTaGTTCTATAACAGCCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPYYKCLYTIRPRENPHSLCNLL*FYNSPF Trigger: AAAAGGGCTGTTATAGAAGCAGAGAAGATTGCACAA...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGGCCTAGGGAAAACCCCCATTCAAATCTGGGCTTTACTTTCTTAATAAAAGTGTTTAAATCTTTTTaGAGGGCCTGCTTCAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IRPRENPHSNLGFTFLIKVFKSF*RACFRF Trigger: AAACCTGAAGCAGGCCCTGCAAAAAGATTTAAACAC...TTTTATTAAGAAAGTAAAGCCCAGATTTGAATGGGGGTTTTCCCTAGGCCTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR GCA 90 bp | CAAACAATTCTATGTAAACTTCTTGAAGTGTGTGGGCACTGCAAAACTGGTTCACACAATGTCAAACACTaGACAGATCTGAATGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTILCKLLEVCGHCKTGSHNVKH*TDLNVV Trigger: TACAACATTCAGATCTGTGCAGTGTTTGACATTGTG...TGAACCAGTTTTGCAGTGCCCACACACTTCAAGAAGTTTACATAGAATTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171952.2 |
||
| CDS CCA 90 bp | CTCCCCTGTAGTACACGGCCAAGTGTCCCTCTTCGATCTTGTGGATaGAGGCGTACAGGAGGATCGCCACCAACCCCACCACTGCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPCSTRPSVPLRSCG*RRTGGSPPTPPLQP Trigger: TGGCTGCAGTGGTGGGGTTGGTGGCGATCCTCCTGTACGCCTCCATCCACAAGATCGAAGAGGGACACTTGGCCGTGTACTACAGGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 ENSMUST00000171952.2 ENSMUST00000172041.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGACTCGGCATCTGCTTTaGCCTTCTCTCGGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVTRHLL*PSLGPG Trigger: TCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAGT...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGTGTCCCTCTTCGATCTaGTGGATGGAGGCGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVCPSSI*WMEAYR Trigger: CCTGTACGCCTCCATCCACAAGATCGAAGAGGGACA...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCTGTCCCTCTTCGATCTaGTGGATGGAGGCGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HNPLAAVRSTAERFQKWPCPSSI*WMEAYR Trigger: CCTGTACGCCTCCATCCACAAGATCGAAGAGGGACA...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | CAGTTGTCTGTGGCTAAAACCGGGCACTTTAGTCACACATGGGCTGGGACAGTGTACTCTGGGGTCAGTTaGTGCTTGTTTGAGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: QLSVAKTGHFSHTWAGTVYSGVS*CLFEVA Trigger: CGCCACCTCAAACAAGCACAAACTGACCCCAGAGTA...CACTGTCCCAGCCCATGTGTGACTAAAGTGCCCGGTTTTAGCCACAGACAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGTGTCCCTCTTCGATCTaGTGGATGGAGGCGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: WKSNFGICIPGKETKMTECPSSI*WMEAYR Trigger: CCTGTACGCCTCCATCCACAAGATCGAAGAGGGACA...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCATGGCCTGGTATTTCTaGAGCTCCAGATACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: HNPLAAVRSTAERFQKWPMAWYF*SSRYSG Trigger: CCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCAT...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGGGGGTCAGTTTGTGCTaGTTTGAGGTGGCGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: WKSNFGICIPGKETKMTEGVSLC*FEVAYL Trigger: CAAATACGCCACCTCAAACAAGCACAAACTGACCCC...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | CCTATGACCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCATTTCACATGGCCTGGTATTTCTaGAGCTCCAGATACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PMTGKKSHNHHFGATAFHMAWYF*SSRYSG Trigger: CCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCAT...GTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGATGGCCTGGTATTTCTaGAGCTCCAGATACTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: VWHNPLAAVRSTAERFQKMAWYF*SSRYSG Trigger: CCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCAT...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS TCA 90 bp | CACAAACATGCTGGGGATGTTGCTGCCAAAGTAGATCTTACTGTTTaGGGCAATGGCCTGGTATTTCTTGAGCTCCAGATACTCTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HKHAGDVAAKVDLTV*GNGLVFLELQILWG Trigger: ACCCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCACACTTCGAGAATTACTTTAAGGAGAATCAGTGTGTTAGTGACCATAGCACTCGGCATCTGCTTTaGCCTTCTCTCGGGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPHFENYFKENQCVSDHSTRHLL*PSLGPG Trigger: TCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAGT...GCTATGGTCACTAACACACTGATTCTCCTTAAAGTAATTCTCGAAGTGTGGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS-3UTR CAA 90 bp | CCTTGGCCTTTAGATAGAAGTGTTGGGGTGAATGAATGTGCCCCAAATCCAGTTGGGGTCAGTTTGTGCTaGTTTGAGGTGGCGTATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWPLDRSVGVNECAPNPVGVSLC*FEVAYL Trigger: CAAATACGCCACCTCAAACAAGCACAAACTGACCCC...AACTGGATTTGGGGCACATTCATTCACCCCAACACTTCTATCTAAAGGCCAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS TCA 90 bp | TGCCAAAGTAGATCTTACTGTTTGAGGCAATGGCCTGGTATTTCTTaGGCTCCAGATACTCTGGGGTCAGTTTGTGCTTGTTTGAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CQSRSYCLRQWPGIS*APDTLGSVCACLRW Trigger: CCACCTCAAACAAGCACAAACTGACCCCAGAGTATCTGGAGCTCAAGAAATACCAGGCCATTGCCTCAAACAGTAAGATCTACTTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS GCA 90 bp | ATTTCAGAGCACAGGAGGAGTCCACAAACATGCTGGGGATGTTGCTaGCAAAGTAGATCTTACTGTTTGAGGCAATGGCCTGGTATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ISEHRRSPQTCWGCC*QSRSYCLRQWPGIS Trigger: AGAAATACCAGGCCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS GCA 90 bp | AGTATTTCAGAGCACAGGAGGAGTCCACAAACATGCTGGGGATGTTaGTGCCAAAGTAGATCTTACTGTTTGAGGCAATGGCCTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: SISEHRRSPQTCWGC*CQSRSYCLRQWPGI Trigger: AATACCAGGCCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTCTGAAATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
||
| CDS GCA 90 bp | TCCTACCATCAGAGTATTTCAGAGCACAGGAGGAGTCCACAAACATaGTGGGGATGTTGCTGCCAAAGTAGATCTTACTGTTTGAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SYHQSISEHRRSPQT*WGCCCQSRSYCLRQ Trigger: TTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTCTGAAATACTCTGATGGTAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS CCA 90 bp | TACCATCAGAGTATTTCAGAGCACAGGAGGAGTCCACAAACATGCTaGGGATGTTGCTGCCAAAGTAGATCTTACTGTTTGAGGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: YHQSISEHRRSPQTC*GCCCQSRSYCLRQW Trigger: CCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTCTGAAATACTCTGATGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | GTGGCAAAGTACGCGTCCCTGCAGGCCACCAACCTGACTAGAAAAACAGAAAGGCTCCATCACTTTCTGTaGAAATCGAATTTTTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VAKYASLQATNLTRKTERLHHFL*KSNFCY Trigger: GTAGCAAAAATTCGATTTCAACAGAAAGTGATGGAG...CCTTTCTGTTTTTCTAGTCAGGTTGGTGGCCTGCAGGGACGCGTACTTTGCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | CCTATGACCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCATTTCACTCAGTTTGTGCTTGTTaGAGGTGGCGTATTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PMTGKKSHNHHFGATAFHSVCAC*RWRICV Trigger: CACACAAATACGCCACCTCAAACAAGCACAAACTGA...GTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | CCACAACCATCACTTTGGGGCAACAGCATTTCACTAAATGGGAATGAGAAACATTACTCTGGGGTCAGTTaGTGCTTGTTTGAGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQPSLWGNSISLNGNEKHYSGVS*CLFEVA Trigger: CGCCACCTCAAACAAGCACAAACTGACCCCAGAGTA...ATGTTTCTCATTCCCATTTAGTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | CAAACAATTCTATGTAAACTTCTTGAAGTGTGTGGGCACTGCAAAACTGGTTCATGTCCCTCTTCGATCTaGTGGATGGAGGCGTACAGG | + |
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Preference number: 5 (lower is better) Translates to: QTILCKLLEVCGHCKTGSCPSSI*WMEAYR Trigger: CCTGTACGCCTCCATCCACAAGATCGAAGAGGGACA...TGAACCAGTTTTGCAGTGCCCACACACTTCAAGAAGTTTACATAGAATTGTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171952.2 |
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| CDS-3UTR CAA 90 bp | CACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGTGGCCCCTCCATCACTTTCTGTaGAAATCGAATTTTTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: HNPLAAVRSTAERFQKWPLHHFL*KSNFCY Trigger: GTAGCAAAAATTCGATTTCAACAGAAAGTGATGGAG...GGGCCACTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | ACTTTTCTGTCTGGCTTCAACACAGTATACACAAGAGCTGTCAACAAGCTGGGCTCAGTTTGTGCTTGTTaGAGGTGGCGTATTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TFLSGFNTVYTRAVNKLGSVCAC*RWRICV Trigger: CACACAAATACGCCACCTCAAACAAGCACAAACTGA...GCCCAGCTTGTTGACAGCTCTTGTGTATACTGTGTTGAAGCCAGACAGAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCATACTCTGGGGTCAGTTaGTGCTTGTTTGAGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPYYKCLYTIRPRENPHSYSGVS*CLFEVA Trigger: CGCCACCTCAAACAAGCACAAACTGACCCCAGAGTA...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | CCTATGACCGGTAAGAAATCCCACAACCATCACTTTGGGGCAACAGCATTTCACAGTAGATCTTACTGTTaGAGGCAATGGCCTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: PMTGKKSHNHHFGATAFHSRSYC*RQWPGI Trigger: AATACCAGGCCATTGCCTCAAACAGTAAGATCTACT...GTGAAATGCTGTTGCCCCAAAGTGATGGTTGTGGGATTTCTTACCGGTCATAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | GTTTGGCACAACCCTTTAGCTGCTGTGAGATCAACAGCTGAGAGGTTTCAGAAGAGTAGATCTTACTGTTaGAGGCAATGGCCTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: VWHNPLAAVRSTAERFQKSRSYC*RQWPGI Trigger: AATACCAGGCCATTGCCTCAAACAGTAAGATCTACT...CTTCTGAAACCTCTCAGCTGTTGATCTCACAGCAGCTAAAGGGTTGTGCCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGAGTAGATCTTACTGTTaGAGGCAATGGCCTGGTATT | + |
|
Preference number: 5 (lower is better) Translates to: WKSNFGICIPGKETKMTESRSYC*RQWPGI Trigger: AATACCAGGCCATTGCCTCAAACAGTAAGATCTACT...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | AGCCCGGGTCCCAAGTGTCTGATGACACTTGTCTTCTTTAACTTACCGTTTTCTTTCTATGTAAACTTCTaGAAGTGTGTGGGCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SPGPKCLMTLVFFNLPFSFYVNF*KCVGTA Trigger: TGCAGTGCCCACACACTTCAAGAAGTTTACATAGAA...AGAAAACGGTAAGTTAAAGAAGACAAGTGTCATCAGACACTTGGGACCCGGGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | TGGAAAAGCAACTTCGGTATCTGCATCCCAGGGAAGGAGACAAAGATGACTGAGTCGAATTTTTGCTACTaGTGCAATCTTCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WKSNFGICIPGKETKMTESNFCY*CNLLCF Trigger: GAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGA...CTCAGTCATCTTTGTCTCCTTCCCTGGGATGCAGATACCGAAGTTGCTTTTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | GAGGATGCTGTCTCGGTCACTTTGTTCCACACTTCGAGAATTACTTTAAGGAGATCAGTTTGTGCTTGTTaGAGGTGGCGTATTTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EDAVSVTLFHTSRITLRRSVCAC*RWRICV Trigger: CACACAAATACGCCACCTCAAACAAGCACAAACTGA...TCTCCTTAAAGTAATTCTCGAAGTGTGGAACAAAGTGACCGAGACAGCATCCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | TCTCCATATTACAAATGCCTCTATACTATAAGGCCTAGGGAAAACCCCCATTCAATGGCTTCTGGGATTTaGGGTTTTGTAACACGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SPYYKCLYTIRPRENPHSMASGI*GFVTRT Trigger: TGTGCGTGTTACAAAACCCAAAATCCCAGAAGCCAT...TGAATGGGGGTTTTCCCTAGGCCTTATAGTATAGAGGCATTTGTAATATGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | GAGGATGCTGTCTCGGTCACTTTGTTCCACACTTCGAGAATTACTTTAAGGAGATCGAATTTTTGCTACTaGTGCAATCTTCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EDAVSVTLFHTSRITLRRSNFCY*CNLLCF Trigger: GAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGA...TCTCCTTAAAGTAATTCTCGAAGTGTGGAACAAAGTGACCGAGACAGCATCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGATGGCTTCTGGGATTTaGGGTTTTGTAACACGCACA | + |
|
Preference number: 5 (lower is better) Translates to: QSSFICSNNVTPVFEGPKMASGI*GFVTRT Trigger: TGTGCGTGTTACAAAACCCAAAATCCCAGAAGCCAT...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | GAGGATGCTGTCTCGGTCACTTTGTTCCACACTTCGAGAATTACTTTAAGGAGACTCCATCACTTTCTGTaGAAATCGAATTTTTGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: EDAVSVTLFHTSRITLRRLHHFL*KSNFCY Trigger: GTAGCAAAAATTCGATTTCAACAGAAAGTGATGGAG...TCTCCTTAAAGTAATTCTCGAAGTGTGGAACAAAGTGACCGAGACAGCATCCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 90 bp | TTCTTTCTCCATCACTTTCTGTTGAAATCGAATTTTTGCTACTTGTaGAATCTTCTCTGCTTCTATAACAGCCCTTTTCCTCTCCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FFLHHFLLKSNFCYL*NLLCFYNSPFPLRL Trigger: GAGACGGAGAGGAAAAGGGCTGTTATAGAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGATTTCAACAGAAAGTGATGGAGAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | ATAAGGCCTAGGGAAAACCCCCATTCAAATCTGGGCTTTACTTTCTTAATAAAAATGGCTTCTGGGATTTaGGGTTTTGTAACACGCACA | + |
|
Preference number: 5 (lower is better) Translates to: IRPRENPHSNLGFTFLIKMASGI*GFVTRT Trigger: TGTGCGTGTTACAAAACCCAAAATCCCAGAAGCCAT...TTTTATTAAGAAAGTAAAGCCCAGATTTGAATGGGGGTTTTCCCTAGGCCTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS-3UTR CAA 90 bp | CAATCATCATTTATCTGCAGCAACAATGTAACACCAGTATTTGAAGGGCCAAAGTCGAATTTTTGCTACTaGTGCAATCTTCTCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSSFICSNNVTPVFEGPKSNFCY*CNLLCF Trigger: GAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGA...CTTTGGCCCTTCAAATACTGGTGTTACATTGTTGCTGCAGATAAATGATGATTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | GGAGGCGTACAGGAGGATCGCCACCAACCCCACCACTaGAGCCACCAGAAGCCGGGCTTGAGTCATATTCAT | + |
|
Preference number: 6 (lower is better) Translates to: GGVQEDRHQPHH*SHQKPGLSHIH Trigger: ATGAATATGACTCAAGCCCGGCTTCTGGTGGCTGCAGTGGTGGGGTTGGTGGCGATCCTCCTGTACGCCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 ENSMUST00000171952.2 ENSMUST00000172041.8 |
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| CDS CCA 72 bp | AGTACACGGCCAAGTGTCCCTCTTCGATCTTGTGGATaGAGGCGTACAGGAGGATCGCCACCAACCCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: STRPSVPLRSCG*RRTGGSPPTPP Trigger: TGGTGGGGTTGGTGGCGATCCTCCTGTACGCCTCCATCCACAAGATCGAAGAGGGACACTTGGCCGTGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 ENSMUST00000171952.2 ENSMUST00000172041.8 |
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| CDS CAA 72 bp | CGTATTTGTGTGCAGCGTAATACTCGGCATCTGCTTTaGCCTTCTCTCGGGCCAGGAACGCAGCATCTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: RICVQRNTRHLL*PSLGPGTQHLQ Trigger: TTGAAGATGCTGCGTTCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAGTATTACGCTGCACACAAATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS CAA 90 bp | TTGAGGTGGCGTATTTGTGTGCAGCGTAATACTCGGCATCTGCTTTaGCCTTCTCTCGGGCCAGGAACGCAGCATCTTCAATCTCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRWRICVQRNTRHLL*PSLGPGTQHLQSQK Trigger: TTTCTGAGATTGAAGATGCTGCGTTCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAGTATTACGCTGCACACAAATACGCCACCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | GTATTTGTGTGCAGCGTAATACTCGGCATCTGCTTTTaGCTTCTCTCGGGCCAGGAACGCAGCATCTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VFVCSVILGICF*LLSGQERSIFN Trigger: ATTGAAGATGCTGCGTTCCTGGCCCGAGAGAAGGCAAAAGCAGATGCCGAGTATTACGCTGCACACAAATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | CACAGGAGGAGTCCACAAACATGCTGGGGATGTTGCTaGCAAAGTAGATCTTACTGTTTGAGGCAATGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: HRRSPQTCWGCC*QSRSYCLRQWP Trigger: AGGCCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | GAGCACAGGAGGAGTCCACAAACATGCTGGGGATGTTaGTGCCAAAGTAGATCTTACTGTTTGAGGCAATGG | + |
|
Preference number: 6 (lower is better) Translates to: EHRRSPQTCWGC*CQSRSYCLRQW Trigger: CCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS CCA 72 bp | CCAGATACTCTGGGGTCAGTTTGTGCTTGTTTGAGGTaGCGTATTTGTGTGCAGCGTAATACTCGGCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PDTLGSVCACLR*RICVQRNTRHL Trigger: CAGATGCCGAGTATTACGCTGCACACAAATACGCCACCTCAAACAAGCACAAACTGACCCCAGAGTATCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS TCA 72 bp | GCTGGGGATGTTGCTGCCAAAGTAGATCTTACTGTTTaGGGCAATGGCCTGGTATTTCTTGAGCTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: AGDVAAKVDLTV*GNGLVFLELQI Trigger: TATCTGGAGCTCAAGAAATACCAGGCCATTGCCTCAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | CAGAGTATTTCAGAGCACAGGAGGAGTCCACAAACATaGTGGGGATGTTGCTGCCAAAGTAGATCTTACTGT | + |
|
Preference number: 6 (lower is better) Translates to: QSISEHRRSPQT*WGCCCQSRSYC Trigger: ACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTCTGAAATACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS CCA 72 bp | AGTATTTCAGAGCACAGGAGGAGTCCACAAACATGCTaGGGATGTTGCTGCCAAAGTAGATCTTACTGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SISEHRRSPQTC*GCCCQSRSYCL Trigger: CAAACAGTAAGATCTACTTTGGCAGCAACATCCCCAGCATGTTTGTGGACTCCTCCTGTGCTCTGAAATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | TTGAAATCGAATTTTTGCTACTTGTGCAATCTTCTCTaGTTCTATAACAGCCCTTTTCCTCTCCGTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LKSNFCYLCNLL*FYNSPFPLRLS Trigger: GCTGAGACGGAGAGGAAAAGGGCTGTTATAGAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGATTTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS CAA 72 bp | CTCCATCACTTTCTGTTGAAATCGAATTTTTGCTACTaGTGCAATCTTCTCTGCTTCTATAACAGCCCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LHHFLLKSNFCY*CNLLCFYNSPF Trigger: AAAAGGGCTGTTATAGAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGATTTCAACAGAAAGTGATGGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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| CDS GCA 72 bp | TTCTTTCTCCATCACTTTCTGTTGAAATCGAATTTTTaGTACTTGTGCAATCTTCTCTGCTTCTATAACAGC | + |
|
Preference number: 6 (lower is better) Translates to: FFLHHFLLKSNF*YLCNLLCFYNS Trigger: GCTGTTATAGAAGCAGAGAAGATTGCACAAGTAGCAAAAATTCGATTTCAACAGAAAGTGATGGAGAAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000071698.13 ENSMUST00000112028.10 ENSMUST00000170801.8 |
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