Pregenerated sensors for ERLEC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020311Ensembl transcript IDs: ENSMUST00000073192.14, ENSMUST00000129593.9, ENSMUST00000143126.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAAGCAAAGCCAAACGCAATCAGTTCATACAAGACCAAAATGAATaGAGTGAGACAAGGATCTGCCTTACAAGTTTATCTGTAATCTCT | + |
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Preference number: 1 (lower is better) Translates to: PSKAKRNQFIQDQNE*SETRICLTSLSVIS Trigger: AGAGATTACAGATAAACTTGTAAGGCAGATCCTTGTCTCACTTCATTCATTTTGGTCTTGTATGAACTGATTGCGTTTGGCTTTGCTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR-3UTR TCA 90 bp | CTCTCCTCTATTTCCACTTCTAGTTTAGTGCTTGACAGCGAGCAACTGTCACAGGACAAGGTCCAATGGTaGGACTCTATAAAGAGATGT | + |
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Preference number: 2 (lower is better) Translates to: LSSISTSSLVLDSEQLSQDKVQW*DSIKRC Trigger: ACATCTCTTTATAGAGTCTCACCATTGGACCTTGTC...CTGTGACAGTTGCTCGCTGTCAAGCACTAAACTAGAAGTGGAAATAGAGGAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR-3UTR TCA 90 bp | ACTATACAGCAGGCACGTACGAGAGCCAGCACAGTGAATTTTAGAATGAACCATTGCCAGTCCTTTTTGTaGTACTACAGACAAGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TIQQARTRASTVNFRMNHCQSFL*YYRQGP Trigger: TGGACCTTGTCTGTAGTATCACAAAAAGGACTGGCA...ATGGTTCATTCTAAAATTCACTGTGCTGGCTCTCGTACGTGCCTGCTGTATAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR-3UTR CCA 90 bp | AGTTCATACAAGACCAAAATGAATGAAGTGAGACAAGGATCTGCCTTACAAGTTGTGAATTTCACAGTGTaGTTGCCAGTCCTTTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: SSYKTKMNEVRQGSALQVVNFTV*LPVLFV Trigger: CACAAAAAGGACTGGCAACCACACTGTGAAATTCAC...AACTTGTAAGGCAGATCCTTGTCTCACTTCATTCATTTTGGTCTTGTATGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR TCA 72 bp | TATACTGGCACGAGTGAGGCTCTAGCATATACACAGTaGCAGCATGAGGAGAGTCTGATTCTTTACACTTTA | + |
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Preference number: 3 (lower is better) Translates to: YTGTSEALAYTQ*QHEESLILYTL Trigger: TAAAGTGTAAAGAATCAGACTCTCCTCATGCTGTCACTGTGTATATGCTAGAGCCTCACTCGTGCCAGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| 3UTR-3UTR CAA 90 bp | TTCTTGAGTGATCTCAGGTTATCTGTGAGGCTCTCCTCTATTTCCACTTCTAGTCTGTCACAGAAACATTaGCTGAAAGGATTTCAGGCA | + |
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Preference number: 3 (lower is better) Translates to: FLSDLRLSVRLSSISTSSLSQKH*LKGFQA Trigger: TGCCTGAAATCCTTTCAGCAAATGTTTCTGTGACAG...ACTAGAAGTGGAAATAGAGGAGAGCCTCACAGATAACCTGAGATCACTCAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR TCA 72 bp | AGTCCTTTTTGTGATACTACAGACAAGGTCCAATGGTaGGACTCTATAAAGAGATGTGGTCAGGAGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SPFCDTTDKVQW*DSIKRCGQEKV Trigger: CACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACCTTGTCTGTAGTATCACAAAAAGGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR-3UTR CAA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGAAATTTCACAGTGTGGTaGCCAGTCCTTTTTGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: HELSALDMYSVVNSFMVRNFTVW*PVLFVI Trigger: TATCACAAAAAGGACTGGCAACCACACTGTGAAATT...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR TCA 72 bp | GCCAAACGCAATCAGTTCATACAAGACCAAAATGAATaGAGTGAGACAAGGATCTGCCTTACAAGTTTATCT | + |
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Preference number: 3 (lower is better) Translates to: AKRNQFIQDQNE*SETRICLTSLS Trigger: AGATAAACTTGTAAGGCAGATCCTTGTCTCACTTCATTCATTTTGGTCTTGTATGAACTGATTGCGTTTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR CCA 72 bp | AGACAAGGTCCAATGGTGAGACTCTATAAAGAGATGTaGTCAGGAGAAAGTGATGATTTTCAATCATCTTTC | + |
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Preference number: 3 (lower is better) Translates to: RQGPMVRLYKEM*SGESDDFQSSF Trigger: GAAAGATGATTGAAAATCATCACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACCTTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR CCA 72 bp | TCTGTAATCTCTTATATACACGTGAATTTCACAGTGTaGTTGCCAGTCCTTTTTGTGATACTACAGACAAGG | + |
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Preference number: 3 (lower is better) Translates to: SVISYIHVNFTV*LPVLFVILQTR Trigger: CCTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGTATATAAGAGATTACAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| 3UTR TCA 72 bp | ATAAGCTGGACTAAACTGCTTGGATCAGATTTGTTTTaGAATTACATTACCCAAGCAAAGCCAAACGCAATC | + |
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Preference number: 3 (lower is better) Translates to: ISWTKLLGSDLF*NYITQAKPNAI Trigger: GATTGCGTTTGGCTTTGCTTGGGTAATGTAATTTCAAAACAAATCTGATCCAAGCAGTTTAGTCCAGCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | ACTATACAGCAGGCACGTACGAGAGCCAGCACAGTGAATTTTAGAATGAACCATATGTCGTCGCTGAGCTaGGGCAGCGCTCGGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: TIQQARTRASTVNFRMNHMSSLS*GSARPP Trigger: CGGCGGCCGAGCGCTGCCCCAGCTCAGCGACGACAT...ATGGTTCATTCTAAAATTCACTGTGCTGGCTCTCGTACGTGCCTGCTGTATAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | AATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGGTCCAATAGGGGATGTCGTCGCTaGGCTGGGGCAGCGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: NFTVWLPVLFVILQTRSNRGCRR*AGAALG Trigger: GCCGAGCGCTGCCCCAGCTCAGCGACGACATCCCCT...ATTGGACCTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | ACTATACAGCAGGCACGTACGAGAGCCAGCACAGTGAATTTTAGAATGAACCATACAGTGAGCACTGGCTaGGAGCCAACAGCAATAGGT | + |
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Preference number: 4 (lower is better) Translates to: TIQQARTRASTVNFRMNHTVSTG*EPTAIG Trigger: ACCTATTGCTGTTGGCTCTCAGCCAGTGCTCACTGT...ATGGTTCATTCTAAAATTCACTGTGCTGGCTCTCGTACGTGCCTGCTGTATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | AATCTCTTATATACACGTGAATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATCAGAACCAGCAACAGTaGCCCTCCGGGGACCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: NLLYTREFHSVVASPFCDQNQQQ*PSGDQA Trigger: AGCCTGGTCCCCGGAGGGCCACTGTTGCTGGTTCTG...ATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGTATATAAGAGATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | CTCTCCTCTATTTCCACTTCTAGTTTAGTGCTTGACAGCGAGCAACTGTCACAGGAGCCCGGCAGTGATTaGCAGAATATGTCATTCACA | + |
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Preference number: 4 (lower is better) Translates to: LSSISTSSLVLDSEQLSQEPGSD*QNMSFT Trigger: TGTGAATGACATATTCTGTCAATCACTGCCGGGCTC...CTGTGACAGTTGCTCGCTGTCAAGCACTAAACTAGAAGTGGAAATAGAGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGAGGGTTGTTCCAACAGTaGGCACTGGCTGAGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HELSALDMYSVVNSFMVRGLFQQ*ALAESQ Trigger: TTGGCTCTCAGCCAGTGCTCACTGTTGGAACAACCC...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | CAGCATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGACAGTGAGCACTGGCTaGGAGCCAACAGCAATAGGT | + |
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Preference number: 4 (lower is better) Translates to: QHEESLILYTLVLQSLVWTVSTG*EPTAIG Trigger: ACCTATTGCTGTTGGCTCTCAGCCAGTGCTCACTGT...CCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR TCA 90 bp | CATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTGGGTTGTTCCAACAGTaGGCACTGGCTGAGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: HEESLILYTLVLQSLVWVGLFQQ*ALAESQ Trigger: TTGGCTCTCAGCCAGTGCTCACTGTTGGAACAACCC...AACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR TCA 90 bp | TTCCATAAAAATGTGACACCATCTTGCCCAGCTAGCATATTGTTTGGTGAAACAGGGTTGTTCCAACAGTaGGCACTGGCTGAGAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: FHKNVTPSCPASILFGETGLFQQ*ALAESQ Trigger: TTGGCTCTCAGCCAGTGCTCACTGTTGGAACAACCC...TGTTTCACCAAACAATATGCTAGCTGGGCAAGATGGTGTCACATTTTTATGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
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| CDS-3UTR GCA 90 bp | CTCTCCTCTATTTCCACTTCTAGTTTAGTGCTTGACAGCGAGCAACTGTCACAGAGTATCTCTTCCTGCTaGTCCAACTGTCTTAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LSSISTSSLVLDSEQLSQSISSC*SNCLSV Trigger: CACACTAAGACAGTTGGAGCAGCAGGAAGAGATACT...CTGTGACAGTTGCTCGCTGTCAAGCACTAAACTAGAAGTGGAAATAGAGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | CCCCATTTCCATAAAAATGTGACACCATCTTGCCCAGCTAGCATATTGTTTGGTGTCAGCTTGGAAATGTaGGTTGTTCCAACAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PHFHKNVTPSCPASILFGVSLEM*VVPTVS Trigger: GCTCACTGTTGGAACAACCCACATTTCCAAGCTGAC...ACCAAACAATATGCTAGCTGGGCAAGATGGTGTCACATTTTTATGGAAATGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
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| CDS-3UTR TCA 90 bp | ACTTCTAGTTTAGTGCTTGACAGCGAGCAACTGTCACAGAAACATTTGCTGAAATGGAGAGCCCGGCAGTaGTTGACAGAATATGTCATT | + |
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Preference number: 4 (lower is better) Translates to: TSSLVLDSEQLSQKHLLKWRARQ*LTEYVI Trigger: AATGACATATTCTGTCAATCACTGCCGGGCTCTCCA...TTTCAGCAAATGTTTCTGTGACAGTTGCTCGCTGTCAAGCACTAAACTAGAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | ACTATACAGCAGGCACGTACGAGAGCCAGCACAGTGAATTTTAGAATGAACCATCCTCTTTATTTCTCCTaGATGGCACTCTCAGTATCT | + |
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Preference number: 4 (lower is better) Translates to: TIQQARTRASTVNFRMNHPLYFS*MALSVS Trigger: AGATACTGAGAGTGCCATTCAGGAGAAATAAAGAGG...ATGGTTCATTCTAAAATTCACTGTGCTGGCTCTCGTACGTGCCTGCTGTATAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | CATAAAAATGTGACACCATCTTGCCCAGCTAGCATATTGTTTGGTGAAACAATTACAGTGAGCACTGGCTaGGAGCCAACAGCAATAGGT | + |
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Preference number: 4 (lower is better) Translates to: HKNVTPSCPASILFGETITVSTG*EPTAIG Trigger: ACCTATTGCTGTTGGCTCTCAGCCAGTGCTCACTGT...AATTGTTTCACCAAACAATATGCTAGCTGGGCAAGATGGTGTCACATTTTTATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
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| CDS-3UTR CCA 90 bp | CTCTCCTCTATTTCCACTTCTAGTTTAGTGCTTGACAGCGAGCAACTGTCACAGTCACAGTACTTGATCTaGGTCGATTTTGTTTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LSSISTSSLVLDSEQLSQSQYLI*VDFVSD Trigger: GTCTGAAACAAAATCGACCCAGATCAAGTACTGTGA...CTGTGACAGTTGCTCGCTGTCAAGCACTAAACTAGAAGTGGAAATAGAGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | GGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCATCCAACAGTGAGCACTaGCTGAGAGCCAACAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GESDSLHFSFTVTCLGLSSNSEH*LRANSN Trigger: ATTGCTGTTGGCTCTCAGCCAGTGCTCACTGTTGGA...TGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR CCA 90 bp | CTTGCCCAGCTAGCATATTGTTTGGTGAAACAATTCTTCCTTTCTGTTTTCCATTCCAACAGTGAGCACTaGCTGAGAGCCAACAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LAQLAYCLVKQFFLSVFHSNSEH*LRANSN Trigger: ATTGCTGTTGGCTCTCAGCCAGTGCTCACTGTTGGA...ATGGAAAACAGAAAGGAAGAATTGTTTCACCAAACAATATGCTAGCTGGGCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
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| CDS-3UTR CCA 90 bp | GGTCCAATGGTGAGACTCTATAAAGAGATGTGGTCAGGAGAAAGTGATGATTTTGTCAGCTTGGAAATGTaGGTTGTTCCAACAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GPMVRLYKEMWSGESDDFVSLEM*VVPTVS Trigger: GCTCACTGTTGGAACAACCCACATTTCCAAGCTGAC...AAAATCATCACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | ACACGTGAATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGAACTCCTTGATGAGCTaGTCATCTGTCAGCTTGGAA | + |
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Preference number: 4 (lower is better) Translates to: TREFHSVVASPFCDTTDKNSLMS*SSVSLE Trigger: TTCCAAGCTGACAGATGACCAGCTCATCAAGGAGTT...CTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | ACTATACAGCAGGCACGTACGAGAGCCAGCACAGTGAATTTTAGAATGAACCATTGTAACTTCAGCTACTaGAAGGATCTCATGCTTAGA | + |
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Preference number: 4 (lower is better) Translates to: TIQQARTRASTVNFRMNHCNFSY*KDLMLR Trigger: TCTAAGCATGAGATCCTTTCAGTAGCTGAAGTTACA...ATGGTTCATTCTAAAATTCACTGTGCTGGCTCTCGTACGTGCCTGCTGTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGGAGCCCGGCAGTGATTaGCAGAATATGTCATTCACA | + |
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Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQEPGSD*QNMSFT Trigger: TGTGAATGACATATTCTGTCAATCACTGCCGGGCTC...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR TCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGTGGAGAGCCCGGCAGTaGTTGACAGAATATGTCATT | + |
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Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQWRARQ*LTEYVI Trigger: AATGACATATTCTGTCAATCACTGCCGGGCTCTCCA...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR TCA 90 bp | GGTCCAATGGTGAGACTCTATAAAGAGATGTGGTCAGGAGAAAGTGATGATTTTATATACTGGCACGAGTaGGGCTCTAGCATATACACA | + |
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Preference number: 4 (lower is better) Translates to: GPMVRLYKEMWSGESDDFIYWHE*GSSIYT Trigger: TGTGTATATGCTAGAGCCTCACTCGTGCCAGTATAT...AAAATCATCACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR GCA 90 bp | GGTCCAATGGTGAGACTCTATAAAGAGATGTGGTCAGGAGAAAGTGATGATTTTCTCAGTATCTCTTCCTaGTGCTCCAACTGTCTTAGT | + |
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Preference number: 4 (lower is better) Translates to: GPMVRLYKEMWSGESDDFLSISS*CSNCLS Trigger: ACTAAGACAGTTGGAGCAGCAGGAAGAGATACTGAG...AAAATCATCACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR GCA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGATTAGCCCACTCAACATaGTCTTCTTGGTTCCATGTC | + |
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Preference number: 4 (lower is better) Translates to: HELSALDMYSVVNSFMVRLAHST*SSWFHV Trigger: GACATGGAACCAAGAAGAGCATGTTGAGTGGGCTAA...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | ACTATACAGCAGGCACGTACGAGAGCCAGCACAGTGAATTTTAGAATGAACCATAAAGCTCTCTTGGATTaGGGCCTTTGTAATCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: TIQQARTRASTVNFRMNHKALLD*GLCNPF Trigger: AAAAGGATTACAAAGGCCCCAATCCAAGAGAGCTTT...ATGGTTCATTCTAAAATTCACTGTGCTGGCTCTCGTACGTGCCTGCTGTATAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | AATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGGTCCAATAGGTTTGTGGATGGCTaGAAATCTCTCTTCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: NFTVWLPVLFVILQTRSNRFVDG*KSLFLS Trigger: GCTAAGGAAGAGAGATTTCCAGCCATCCACAAACCT...ATTGGACCTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | CAGCATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGAGGTTTGTGGATGGCTaGAAATCTCTCTTCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: QHEESLILYTLVLQSLVWRFVDG*KSLFLS Trigger: GCTAAGGAAGAGAGATTTCCAGCCATCCACAAACCT...CCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR CCA 90 bp | TTACATTACCCAAGCAAAGCCAAACGCAATCAGTTCATACAAGACCAAAATGAATCCAACAGTGAGCACTaGCTGAGAGCCAACAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LHYPSKAKRNQFIQDQNESNSEH*LRANSN Trigger: ATTGCTGTTGGCTCTCAGCCAGTGCTCACTGTTGGA...TTCATTTTGGTCTTGTATGAACTGATTGCGTTTGGCTTTGCTTGGGTAATGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | GGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGTCAGCTTGGAAATGTaGGTTGTTCCAACAGTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GESDSLHFSFTVTCLGLSVSLEM*VVPTVS Trigger: GCTCACTGTTGGAACAACCCACATTTCCAAGCTGAC...TGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
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| CDS-3UTR CCA 90 bp | GGTCCAATGGTGAGACTCTATAAAGAGATGTGGTCAGGAGAAAGTGATGATTTTGGTCATCTGTCAGCTTaGAAATGTGGGTTGTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GPMVRLYKEMWSGESDDFGHLSA*KCGLFQ Trigger: TTGGAACAACCCACATTTCCAAGCTGACAGATGACC...AAAATCATCACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR CCA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGATCAACATGCTCTTCTTaGTTCCATGTCCCCACAACT | + |
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Preference number: 4 (lower is better) Translates to: HELSALDMYSVVNSFMVRSTCSS*FHVPTT Trigger: AGTTGTGGGGACATGGAACCAAGAAGAGCATGTTGA...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | TTCTTGAGTGATCTCAGGTTATCTGTGAGGCTCTCCTCTATTTCCACTTCTAGTGTACATCACAGTACTTaGTCTGGGTCGATTTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: FLSDLRLSVRLSSISTSSVHHST*SGSILF Trigger: AAACAAAATCGACCCAGATCAAGTACTGTGATGTAC...ACTAGAAGTGGAAATAGAGGAGAGCCTCACAGATAACCTGAGATCACTCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGAAACTTGTATTTAGGATaGCTGCACAAGAGTGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: HELSALDMYSVVNSFMVRNLYLG*LHKSGV Trigger: GACACCACTCTTGTGCAGTCATCCTAAATACAAGTT...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
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| CDS-3UTR TCA 90 bp | TTACATTACCCAAGCAAAGCCAAACGCAATCAGTTCATACAAGACCAAAATGAACTAGCATATACACAGTaGCAGCATGAGGAGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LHYPSKAKRNQFIQDQNELAYTQ*QHEESL Trigger: CAGACTCTCCTCATGCTGTCACTGTGTATATGCTAG...TTCATTTTGGTCTTGTATGAACTGATTGCGTTTGGCTTTGCTTGGGTAATGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR GCA 90 bp | CATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTAGTATCTCTTCCTGCTaGTCCAACTGTCTTAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HEESLILYTLVLQSLVWVSISSC*SNCLSV Trigger: CACACTAAGACAGTTGGAGCAGCAGGAAGAGATACT...AACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR GCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGTTAGCCCACTCAACATaGTCTTCTTGGTTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQLAHST*SSWFHV Trigger: GACATGGAACCAAGAAGAGCATGTTGAGTGGGCTAA...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR CCA 90 bp | ACACGTGAATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGATGACTGCACAAGAGTaGTGTCAAAATGACAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TREFHSVVASPFCDTTDKMTAQE*CQNDNF Trigger: GAAGTTGTCATTTTGACACCACTCTTGTGCAGTCAT...CTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CCA 90 bp | CATTTCCATAAAAATGTGACACCATCTTGCCCAGCTAGCATATTGTTTGGTGAAAGGTTTGTGGATGGCTaGAAATCTCTCTTCCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFHKNVTPSCPASILFGERFVDG*KSLFLS Trigger: GCTAAGGAAGAGAGATTTCCAGCCATCCACAAACCT...TTCACCAAACAATATGCTAGCTGGGCAAGATGGTGTCACATTTTTATGGAAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGGGTCATCTGTCAGCTTaGAAATGTGGGTTGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQGHLSA*KCGLFQ Trigger: TTGGAACAACCCACATTTCCAAGCTGACAGATGACC...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGCCCAGCTAGCATATTGTTTGGTGAAACAATTCTTCCTTTCTGTTTTCCAGGTCATCTGTCAGCTTaGAAATGTGGGTTGTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SCPASILFGETILPFCFPGHLSA*KCGLFQ Trigger: TTGGAACAACCCACATTTCCAAGCTGACAGATGACC...TGGAAAACAGAAAGGAAGAATTGTTTCACCAAACAATATGCTAGCTGGGCAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGAACTCCTTGATGAGCTaGTCATCTGTCAGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQNSLMS*SSVSLE Trigger: TTCCAAGCTGACAGATGACCAGCTCATCAAGGAGTT...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR CCA 90 bp | TTCCATAAAAATGTGACACCATCTTGCCCAGCTAGCATATTGTTTGGTGAAACAAACTCCTTGATGAGCTaGTCATCTGTCAGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FHKNVTPSCPASILFGETNSLMS*SSVSLE Trigger: TTCCAAGCTGACAGATGACCAGCTCATCAAGGAGTT...TGTTTCACCAAACAATATGCTAGCTGGGCAAGATGGTGTCACATTTTTATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
||
| CDS-3UTR CCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGTCAACATGCTCTTCTTaGTTCCATGTCCCCACAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQSTCSS*FHVPTT Trigger: AGTTGTGGGGACATGGAACCAAGAAGAGCATGTTGA...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGAACTTGTATTTAGGATaGCTGCACAAGAGTGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQNLYLG*LHKSGV Trigger: GACACCACTCTTGTGCAGTCATCCTAAATACAAGTT...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR TCA 90 bp | CATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTCCTCTTTATTTCTCCTaGATGGCACTCTCAGTATCT | + |
|
Preference number: 4 (lower is better) Translates to: HEESLILYTLVLQSLVWVPLYFS*MALSVS Trigger: AGATACTGAGAGTGCCATTCAGGAGAAATAAAGAGG...AACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR TCA 90 bp | CAGCATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGTGTTTTCCATCAAGGTaGTCCCATTACACACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QHEESLILYTLVLQSLVWCFPSR*SHYTLF Trigger: GAAAAGTGTGTAATGGGATCACCTTGATGGAAAACA...CCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR GCA 90 bp | AATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGGTCCAATACTGAAAGGATCTCATaGTTAGATTCAGGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NFTVWLPVLFVILQTRSNTERIS*LDSGWH Trigger: ATGCCATCCTGAATCTAAGCATGAGATCCTTTCAGT...ATTGGACCTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CCA 90 bp | CAGCATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGTCACAGTACTTGATCTaGGTCGATTTTGTTTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: QHEESLILYTLVLQSLVWSQYLI*VDFVSD Trigger: GTCTGAAACAAAATCGACCCAGATCAAGTACTGTGA...CCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR TCA 90 bp | GAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAGGTACATCACAGTACTTaGTCTGGGTCGATTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ESLILYTLVLQSLVWVCQVHHST*SGSILF Trigger: AAACAAAATCGACCCAGATCAAGTACTGTGATGTAC...CTGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCATGTAACTTCAGCTACTaGAAGGATCTCATGCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GESDSLHFSFTVTCLGLSCNFSY*KDLMLR Trigger: TCTAAGCATGAGATCCTTTCAGTAGCTGAAGTTACA...TGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR TCA 90 bp | GGTCCAATGGTGAGACTCTATAAAGAGATGTGGTCAGGAGAAAGTGATGATTTTAGAGTGGTGTCAAAATaGCAACTTCATATTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPMVRLYKEMWSGESDDFRVVSK*QLHIHK Trigger: CTTGTGAATATGAAGTTGTCATTTTGACACCACTCT...AAAATCATCACTTTCTCCTGACCACATCTCTTTATAGAGTCTCACCATTGGACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR TCA 90 bp | CAGCATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGAGAGTGGTGTCAAAATaGCAACTTCATATTCACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QHEESLILYTLVLQSLVWRVVSK*QLHIHK Trigger: CTTGTGAATATGAAGTTGTCATTTTGACACCACTCT...CCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCAACTGAAAGGATCTCATaGTTAGATTCAGGATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GESDSLHFSFTVTCLGLSTERIS*LDSGWH Trigger: ATGCCATCCTGAATCTAAGCATGAGATCCTTTCAGT...TGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR CCA 90 bp | ACACGTGAATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGCCCACTTGTCACAAGTaGAAGTATACATTTGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: TREFHSVVASPFCDTTDKPTCHK*KYTFVF Trigger: AAATACAAATGTATACTTCCACTTGTGACAAGTGGG...CTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CCA 90 bp | TTACATTACCCAAGCAAAGCCAAACGCAATCAGTTCATACAAGACCAAAATGAATTCCAAAAGCTCTCTTaGATTGGGGCCTTTGTAATC | + |
|
Preference number: 4 (lower is better) Translates to: LHYPSKAKRNQFIQDQNEFQKLS*IGAFVI Trigger: GATTACAAAGGCCCCAATCCAAGAGAGCTTTTGGAA...TTCATTTTGGTCTTGTATGAACTGATTGCGTTTGGCTTTGCTTGGGTAATGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CCA 90 bp | CATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTATGACTGCACAAGAGTaGTGTCAAAATGACAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEESLILYTLVLQSLVWVMTAQE*CQNDNF Trigger: GAAGTTGTCATTTTGACACCACTCTTGTGCAGTCAT...AACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR CCA 90 bp | CATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGCTTAGATTCAGGATaGCATATGTACATCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: HEESLILYTLVLQSLVWVCLDSG*HMYITV Trigger: TACTGTGATGTACATATGCCATCCTGAATCTAAGCA...AACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| 3UTR CAA 72 bp | CATAAAAATGTGACACCATCTTGCCCAGCTAGCATATaGTTTGGTGAAACAATTCTTCCTTTCTGTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HKNVTPSCPASI*FGETILPFCFP Trigger: TGGAAAACAGAAAGGAAGAATTGTTTCACCAAACAATATGCTAGCTGGGCAAGATGGTGTCACATTTTTATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143126.3 |
||
| CDS-3UTR CCA 90 bp | AATCTCTTATATACACGTGAATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATTGCTTAGATTCAGGATaGCATATGTACATCACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: NLLYTREFHSVVASPFCDCLDSG*HMYITV Trigger: TACTGTGATGTACATATGCCATCCTGAATCTAAGCA...ATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGTATATAAGAGATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS TCA 90 bp | TCTGTCAGCTTGGAAATGTGGGTTGTTCCAACAGTGAGCACTGGCTaGGAGCCAACAGCAATAGGTTTGTGGATGGCTGGAAATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVSLEMWVVPTVSTG*EPTAIGLWMAGNLS Trigger: AGAGAGATTTCCAGCCATCCACAAACCTATTGCTGTTGGCTCTCAGCCAGTGCTCACTGTTGGAACAACCCACATTTCCAAGCTGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 ENSMUST00000143126.3 |
||
| CDS GCA 90 bp | TCCTCTTTATTTCTCCTGAATGGCACTCTCAGTATCTCTTCCTGCTaGTCCAACTGTCTTAGTGTGAGGGGTTTAAATGGAGAGCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLFLLNGTLSISSC*SNCLSVRGLNGEPG Trigger: GCCGGGCTCTCCATTTAAACCCCTCACACTAAGACAGTTGGAGCAGCAGGAAGAGATACTGAGAGTGCCATTCAGGAGAAATAAAGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS GCA 90 bp | TCTTCCTCTTTATTTCTCCTGAATGGCACTCTCAGTATCTCTTCCTaGTGCTCCAACTGTCTTAGTGTGAGGGGTTTAAATGGAGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSSLFLLNGTLSISS*CSNCLSVRGLNGEP Trigger: GGGCTCTCCATTTAAACCCCTCACACTAAGACAGTTGGAGCAGCAGGAAGAGATACTGAGAGTGCCATTCAGGAGAAATAAAGAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS-3UTR CAA 90 bp | ACACGTGAATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGCTTCCTCATCCCCACTaGTCACAAGTGGAAGTATAC | + |
|
Preference number: 5 (lower is better) Translates to: TREFHSVVASPFCDTTDKLPHPH*SQVEVY Trigger: GTATACTTCCACTTGTGACAAGTGGGGATGAGGAAG...CTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATTCACGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CAA 90 bp | AATTTCACAGTGTGGTTGCCAGTCCTTTTTGTGATACTACAGACAAGGTCCAATCCACTTAGGAACTCCTaGATGAGCTGGTCATCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NFTVWLPVLFVILQTRSNPLRNS*MSWSSV Trigger: GACAGATGACCAGCTCATCAAGGAGTTCCTAAGTGG...ATTGGACCTTGTCTGTAGTATCACAAAAAGGACTGGCAACCACACTGTGAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CAA 90 bp | ACTTCTAGTTTAGTGCTTGACAGCGAGCAACTGTCACAGAAACATTTGCTGAAACTCAACATGCTCTTCTaGGTTCCATGTCCCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: TSSLVLDSEQLSQKHLLKLNMLF*VPCPHN Trigger: GTTGTGGGGACATGGAACCAAGAAGAGCATGTTGAG...TTTCAGCAAATGTTTCTGTGACAGTTGCTCGCTGTCAAGCACTAAACTAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS-3UTR CAA 90 bp | CAGCATGAGGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGCTCAACATGCTCTTCTaGGTTCCATGTCCCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: QHEESLILYTLVLQSLVWLNMLF*VPCPHN Trigger: GTTGTGGGGACATGGAACCAAGAAGAGCATGTTGAG...CCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCCTCATGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS TCA 90 bp | AACTGTCTTAGTGTGAGGGGTTTAAATGGAGAGCCCGGCAGTGATTaGCAGAATATGTCATTCACAGGAGAGGCTCTGAACTTGTATTTA | + |
|
Preference number: 5 (lower is better) Translates to: NCLSVRGLNGEPGSD*QNMSFTGEALNLYL Trigger: TAAATACAAGTTCAGAGCCTCTCCTGTGAATGACATATTCTGTCAATCACTGCCGGGCTCTCCATTTAAACCCCTCACACTAAGACAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS-3UTR CAA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGAGTTCCAAAAGCTCTCTaGGATTGGGGCCTTTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HELSALDMYSVVNSFMVRVPKAL*DWGLCN Trigger: ATTACAAAGGCCCCAATCCAAGAGAGCTTTTGGAAC...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS TCA 90 bp | GATCTCATGCTTAGATTCAGGATGGCATATGTACATCACAGTACTTaGTCTGGGTCGATTTTGTTTCAGACTACAAGGTGTACCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DLMLRFRMAYVHHST*SGSILFQTTRCTIS Trigger: GGAAATGGTACACCTTGTAGTCTGAAACAAAATCGACCCAGATCAAGTACTGTGATGTACATATGCCATCCTGAATCTAAGCATGAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS-3UTR CAA 90 bp | TTCTTGAGTGATCTCAGGTTATCTGTGAGGCTCTCCTCTATTTCCACTTCTAGTTGTACATCACAGTACTaGATCTGGGTCGATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: FLSDLRLSVRLSSISTSSCTSQY*IWVDFV Trigger: AACAAAATCGACCCAGATCAAGTACTGTGATGTACA...ACTAGAAGTGGAAATAGAGGAGAGCCTCACAGATAACCTGAGATCACTCAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS CCA 90 bp | GTTGTAACTTCAGCTACTGAAAGGATCTCATGCTTAGATTCAGGATaGCATATGTACATCACAGTACTTGATCTGGGTCGATTTTGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVTSATERISCLDSG*HMYITVLDLGRFCF Trigger: GAAACAAAATCGACCCAGATCAAGTACTGTGATGTACATATGCCATCCTGAATCTAAGCATGAGATCCTTTCAGTAGCTGAAGTTACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAGTCTGATTCTTTACACTTTAGTTTTACAGTCACTTGTCTGGGTTTGTCATGTACATCACAGTACTaGATCTGGGTCGATTTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GESDSLHFSFTVTCLGLSCTSQY*IWVDFV Trigger: AACAAAATCGACCCAGATCAAGTACTGTGATGTACA...TGACAAACCCAGACAAGTGACTGTAAAACTAAAGTGTAAAGAATCAGACTCTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129593.9 |
||
| CDS-3UTR CAA 90 bp | CACGAACTGTCTGCACTAGACATGTACTCTGTAGTAAACTCATTCATGGTAAGAGTCACTTGTCTGGGTTaGTCAGTTATATCACAAATA | + |
|
Preference number: 5 (lower is better) Translates to: HELSALDMYSVVNSFMVRVTCLG*SVISQI Trigger: TATTTGTGATATAACTGACAAACCCAGACAAGTGAC...TCTTACCATGAATGAGTTTACTACAGAGTACATGTCTAGTGCAGACAGTTCGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS GCA 90 bp | ACTTCATATTCACAAGTTGTAACTTCAGCTACTGAAAGGATCTCATaGTTAGATTCAGGATGGCATATGTACATCACAGTACTTGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TSYSQVVTSATERIS*LDSGWHMYITVLDL Trigger: CAGATCAAGTACTGTGATGTACATATGCCATCCTGAATCTAAGCATGAGATCCTTTCAGTAGCTGAAGTTACAACTTGTGAATATGAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS CAA 72 bp | CCAGTTGTAGGCAGAGAGAACTCGGTACCAGGCCAGTaGACTCGGAAGGGGATGTCGTCGCTGAGCTGGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PVVGRENSVPGQ*TRKGMSSLSWG Trigger: GCCCCAGCTCAGCGACGACATCCCCTTCCGAGTCAACTGGCCTGGTACCGAGTTCTCTCTGCCTACAACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073192.14 |
||
| CDS TCA 72 bp | TTGGAAATGTGGGTTGTTCCAACAGTGAGCACTGGCTaGGAGCCAACAGCAATAGGTTTGTGGATGGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LEMWVVPTVSTG*EPTAIGLWMAG Trigger: TCCAGCCATCCACAAACCTATTGCTGTTGGCTCTCAGCCAGTGCTCACTGTTGGAACAACCCACATTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 ENSMUST00000143126.3 |
||
| CDS TCA 72 bp | AGTGTGAGGGGTTTAAATGGAGAGCCCGGCAGTGATTaGCAGAATATGTCATTCACAGGAGAGGCTCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SVRGLNGEPGSD*QNMSFTGEALN Trigger: GTTCAGAGCCTCTCCTGTGAATGACATATTCTGTCAATCACTGCCGGGCTCTCCATTTAAACCCCTCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
||
| CDS CCA 72 bp | TGGCTGAGAGCCAACAGCAATAGGTTTGTGGATGGCTaGAAATCTCTCTTCCTTAGCAGATGGCAAATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WLRANSNRFVDG*KSLFLSRWQIF Trigger: GAAGATTTGCCATCTGCTAAGGAAGAGAGATTTCCAGCCATCCACAAACCTATTGCTGTTGGCTCTCAGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 ENSMUST00000143126.3 |
||
| CDS GCA 72 bp | TTTCTCCTGAATGGCACTCTCAGTATCTCTTCCTGCTaGTCCAACTGTCTTAGTGTGAGGGGTTTAAATGGA | + |
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Preference number: 6 (lower is better) Translates to: FLLNGTLSISSC*SNCLSVRGLNG Trigger: TCCATTTAAACCCCTCACACTAAGACAGTTGGAGCAGCAGGAAGAGATACTGAGAGTGCCATTCAGGAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
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| CDS GCA 72 bp | TACGCTCTAGCAGTATTTTTCTTAGCCCACTCAACATaGTCTTCTTGGTTCCATGTCCCCACAACTACAGAA | + |
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Preference number: 6 (lower is better) Translates to: YALAVFFLAHST*SSWFHVPTTTE Trigger: TTCTGTAGTTGTGGGGACATGGAACCAAGAAGAGCATGTTGAGTGGGCTAAGAAAAATACTGCTAGAGCGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
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| CDS CCA 72 bp | TCAGCTACTGAAAGGATCTCATGCTTAGATTCAGGATaGCATATGTACATCACAGTACTTGATCTGGGTCGA | + |
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Preference number: 6 (lower is better) Translates to: SATERISCLDSG*HMYITVLDLGR Trigger: TCGACCCAGATCAAGTACTGTGATGTACATATGCCATCCTGAATCTAAGCATGAGATCCTTTCAGTAGCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
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| CDS TCA 72 bp | CTTAGATTCAGGATGGCATATGTACATCACAGTACTTaGTCTGGGTCGATTTTGTTTCAGACTACAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: LRFRMAYVHHST*SGSILFQTTRC Trigger: ACACCTTGTAGTCTGAAACAAAATCGACCCAGATCAAGTACTGTGATGTACATATGCCATCCTGAATCTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
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| CDS CCA 72 bp | ATTCAGGATGGCATATGTACATCACAGTACTTGATCTaGGTCGATTTTGTTTCAGACTACAAGGTGTACCAT | + |
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Preference number: 6 (lower is better) Translates to: IQDGICTSQYLI*VDFVSDYKVYH Trigger: ATGGTACACCTTGTAGTCTGAAACAAAATCGACCCAGATCAAGTACTGTGATGTACATATGCCATCCTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
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| CDS TCA 72 bp | GACAACTTCATATTCACAAGTTGTAACTTCAGCTACTaGAAGGATCTCATGCTTAGATTCAGGATGGCATAT | + |
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Preference number: 6 (lower is better) Translates to: DNFIFTSCNFSY*KDLMLRFRMAY Trigger: ATATGCCATCCTGAATCTAAGCATGAGATCCTTTCAGTAGCTGAAGTTACAACTTGTGAATATGAAGTTGTC 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000073192.14 ENSMUST00000129593.9 |
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