Pregenerated sensors for ERICH5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044726Ensembl transcript IDs: ENSMUST00000060894.9
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | TGTCCTGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCCGCAGAAAGGTGGTaGCCGCCCTCCCAGCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: CPGTHFVDLAVLELRNPPAAERW*PPSQPQ Trigger: TTGAGGCTGGGAGGGCGGGCACCACCTTTCTGCGGC...AGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCAGGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR-3UTR TCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTCTTCTCTCTCTTAGATaGTCTTACAGTTTTGATTGG | + |
|
Preference number: 2 (lower is better) Translates to: ACATTPGSVKFLLQDRNILLSLR*SYSFDW Trigger: CCAATCAAAACTGTAAGATCATCTAAGAGAGAGAAG...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCCTCGTTGGTCCTGTGTTCTaGGGTTATTTAATTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: WNSLCRSGCPRTQKSSCLVGPVF*GYLILF Trigger: GAACAAAATTAAATAACCCCAGAACACAGGACCAAC...GAGGCAGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR CAA 90 bp | CCCAAAGCTTGCAACAGCACCCCAATTGCATCCCTCCAGAAATTTTaGTTAACATTTAGTATGCCATGGGTCACAGTGATTTGTAGTAGT | + |
|
Preference number: 2 (lower is better) Translates to: PKACNSTPIASLQKF*LTFSMPWVTVICSS Trigger: ACTACTACAAATCACTGTGACCCATGGCATACTAAATGTTAACAAAAATTTCTGGAGGGATGCAATTGGGGTGCTGTTGCAAGCTTTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR TCA 72 bp | GGCTACAAGGGTGAAGATTGCCTTCTCTCTCTTAGATaGTCTTACAGTTTTGATTGGCTATGGCTATTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: GYKGEDCLLSLR*SYSFDWLWLLS Trigger: TGACAATAGCCATAGCCAATCAAAACTGTAAGATCATCTAAGAGAGAGAAGGCAATCTTCACCCTTGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR-3UTR CAA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACCAAACAAAAACAGCATaGTTCTCTTGGTTCCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: ILGRVGPVFWGYLILFHHQTKTA*FSWFLQ Trigger: CTGTAGGAACCAAGAGAACAATGCTGTTTTTGTTTG...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR-3UTR CAA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACTTAAAACTATACTCCTaGTATAAACCACAAAGCCGC | + |
|
Preference number: 3 (lower is better) Translates to: ILGRVGPVFWGYLILFHHLKLYS*YKPQSR Trigger: GCGGCTTTGTGGTTTATACAAGGAGTATAGTTTTAA...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR CCA 72 bp | AGGACAGAAATATTAGGTAGAGTTGGTCCTGTGTTCTaGGGTTATTTAATTTTGTTCCATCACTATTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: RTEILGRVGPVF*GYLILFHHYYN Trigger: GTTATAATAGTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATATTTCTGTCCT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACGGTGTTGGCACGGGCTaGCTTCTGCCTGGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WCPPSQPQISLPSGVTLHGVGTG*LLPGIC Trigger: ACAGATGCCAGGCAGAAGCCAGCCCGTGCCAACACC...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACGCACCACTGAAGCCTTaGGCCTCTCGAGTGAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WCPPSQPQISLPSGVTLHAPLKP*ASRVKD Trigger: ATCCTTCACTCGAGAGGCCCAAGGCTTCAGTGGTGC...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTTGTCGCCCGCTTTGTTaGGGGCGCTGCTGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ACATTPGSVKFLLQDRNICRPLC*GRCWSS Trigger: GCTGCTCCAGCAGCGCCCTCAACAAAGCGGGCGACA...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACAGGAGCTTCACAGGGTaGCTTGTTCATTACAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WCPPSQPQISLPSGVTLHRSFTG*LVHYRC Trigger: ACACCTGTAATGAACAAGTCACCCTGTGAAGCTCCT...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACCTCTCGAGTGAAGGATaGCTTTCCCTTTGTGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WCPPSQPQISLPSGVTLHLSSEG*LSLCVL Trigger: CAACACACAAAGGGAAAGCCATCCTTCACTCGAGAG...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCTTGTATAAACCACAAAGCCGCAGAAAGGTGGTGCCCGCCCTCCCAGCCTCTTTGTGTGTTGCCATaGAAGGCAGCTTCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TPCINHKAAERWCPPSQPLCVLP*KAASPP Trigger: AGGAGGAGAAGCTGCCTTTCATGGCAACACACAAAG...AGGCTGGGAGGGCGGGCACCACCTTTCTGCGGCTTTGTGGTTTATACAAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | ACTCCTTGTATAAACCACAAAGCCGCAGAAAGGTGGTGCCCGCCCTCCCAGCCTTTTGGTGGTAGCTCCTaGGTTGTTTCCAGAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPCINHKAAERWCPPSQPFGGSS*VVSRGR Trigger: TCTGCCTCTGGAAACAACTCAGGAGCTACCACCAAA...AGGCTGGGAGGGCGGGCACCACCTTTCTGCGGCTTTGTGGTTTATACAAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACTCCTCCTGGTGTACATaGTTTAGGTTGGTCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: WCPPSQPQISLPSGVTLHSSWCT*FRLVYT Trigger: TGTGTAGACCAACCTAAACCATGTACACCAGGAGGA...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTGTATAAACCACAAAGCCGCAGAAAGGTGGTGCCCGCCCTCCCAGCCTATCATCTTTGCCTCCTaGCTGAGGTTGCTCACACTC | + |
|
Preference number: 4 (lower is better) Translates to: TPCINHKAAERWCPPSQPIIFAS*LRLLTL Trigger: GAGTGTGAGCAACCTCAGCCAGGAGGCAAAGATGAT...AGGCTGGGAGGGCGGGCACCACCTTTCTGCGGCTTTGTGGTTTATACAAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTGTATAAACCACAAAGCCGCAGAAAGGTGGTGCCCGCCCTCCCAGCCTACTGTTTCTAGAGCTTaGGGCTGCTCAGCTTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TPCINHKAAERWCPPSQPTVSRA*GCSASP Trigger: AGGTGAAGCTGAGCAGCCCCAAGCTCTAGAAACAGT...AGGCTGGGAGGGCGGGCACCACCTTTCTGCGGCTTTGTGGTTTATACAAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | ACTCCTTGTATAAACCACAAAGCCGCAGAAAGGTGGTGCCCGCCCTCCCAGCCTCAGGGTGGATTTCTCTaGCCATTTCCACCTTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TPCINHKAAERWCPPSQPQGGFL*PFPPLL Trigger: CAGCAAAGGTGGAAATGGCCAGAGAAATCCACCCTG...AGGCTGGGAGGGCGGGCACCACCTTTCTGCGGCTTTGTGGTTTATACAAGGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACCTGCTTTCTGCAGATTaGATCCCTTCTATTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WCPPSQPQISLPSGVTLHLLSAD*IPSISG Trigger: TCCAGAAATAGAAGGGATCCAATCTGCAGAAAGCAG...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTCTTGGGCCTCTCGAGTaGAGGATGGCTTTCCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: ACATTPGSVKFLLQDRNILGPLE*RMAFPL Trigger: CAAAGGGAAAGCCATCCTTCACTCGAGAGGCCCAAG...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTTCGAAGTTACTCCGCTaGCGAACCTGCTGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: CPGTHFVDLAVLELRNPPSKLLR*RTCCCR Trigger: GCGACAGCAGCAGGTTCGGCAGCGGAGTAACTTCGA...AGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCAGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTTCTAGAGCTTGGGGCTaGTCAGCTTCACCTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPGTHFVDLAVLELRNPPSRAWG*SASPGA Trigger: AGCCCCAGGTGAAGCTGAGCAGCCCCAAGCTCTAGA...AGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCAGGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCCTCCTGCTCAGCTTCACCTaGGGCTTCTACAAGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLCRSGCPRTQKSSCLLLSFT*GFYKLL Trigger: CAGCAACTTGTAGAAGCCCCAGGTGAAGCTGAGCAG...GAGGCAGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTCGGGACCTCTGTCCTTaGTTCCACATCTTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ACATTPGSVKFLLQDRNIRDLCP*FHIFLH Trigger: GTGAAGAAAGATGTGGAAGCAAGGACAGAGGTCCCG...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR GCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTGGCCATTTCCACCTTTaGTGCTGTCTCTCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ACATTPGSVKFLLQDRNIGHFHL*CCLSSF Trigger: GAAACTGGAGAGACAGCAGCAAAGGTGGAAATGGCC...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCCTCGGCAGCTTCTCCTCCTaGTGTACATGGTTTAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WNSLCRSGCPRTQKSSCLGSFSS*CTWFRL Trigger: CAACCTAAACCATGTACACCAGGAGGAGAAGCTGCC...GAGGCAGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTGATCCCTTCTATTTCTaGAGAGCTGTTCTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ACATTPGSVKFLLQDRNIDPFYF*RAVLFG Trigger: CCCAAAGAGAACAGCTCTCCAGAAATAGAAGGGATC...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACTGCTGTAGGCACCACTaGAGCCTTGGGCCTCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRVGPVFWGYLILFHHCCRHH*SLGPLE Trigger: CTCGAGAGGCCCAAGGCTTCAGTGGTGCCTACAGCA...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACTCTTTGCCTCCTGGCTaGGGTTGCTCACACTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: ILGRVGPVFWGYLILFHHSLPPG*GCSHSP Trigger: CGGGGAGTGTGAGCAACCTCAGCCAGGAGGCAAAGA...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCTCAATCTTCTTTGTaGGTCTTGAGTGATCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CPGTHFVDLAVLELRNPPAQSSL*VLSDLW Trigger: CCACAGATCACTCAAGACCCACAAAGAAGATTGAGC...AGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCAGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTGAGAGCTGTTCTCTTTaGGAATTGCTTCTAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: ACATTPGSVKFLLQDRNIESCSL*ELLLES Trigger: AGATTCTAGAAGCAATTCCCAAAGAGAACAGCTCTC...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR GCA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACGCACGGGCTGGCTTCTaGCTGGCATCTGTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGRVGPVFWGYLILFHHARAGF*LASVMF Trigger: AAACATCACAGATGCCAGGCAGAAGCCAGCCCGTGC...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR GCA 90 bp | AGGGTGAAGATTGCCTTCTCTCTCTTAGATGATCTTACAGTTTTGATTGGCTATCCAACATATCATCTTTaGCTCCTGGCTGAGGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVKIAFSLLDDLTVLIGYPTYHL*LLAEVA Trigger: AGCAACCTCAGCCAGGAGGCAAAGATGATATGTTGG...ATAGCCAATCAAAACTGTAAGATCATCTAAGAGAGAGAAGGCAATCTTCACCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR CAA 72 bp | TGCAACAGCACCCCAATTGCATCCCTCCAGAAATTTTaGTTAACATTTAGTATGCCATGGGTCACAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: CNSTPIASLQKF*LTFSMPWVTVI Trigger: AATCACTGTGACCCATGGCATACTAAATGTTAACAAAAATTTCTGGAGGGATGCAATTGGGGTGCTGTTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR TCA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACTTTGTGGGTCTTGAGTaGTCTGTGGCTTCCTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ILGRVGPVFWGYLILFHHFVGLE*SVASFP Trigger: TGGAAAGGAAGCCACAGATCACTCAAGACCCACAAA...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAAGATTGCCTTCTCTCTCTTAGATGATCTTACAGTTTTGATTGGCTATTCCTCTTTATCAGGGTaGATTTCTCTGGCCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVKIAFSLLDDLTVLIGYSSLSG*ISLAIS Trigger: GGAAATGGCCAGAGAAATCCACCCTGATAAAGAGGA...ATAGCCAATCAAAACTGTAAGATCATCTAAGAGAGAGAAGGCAATCTTCACCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CCA 90 bp | AGGGTGAAGATTGCCTTCTCTCTCTTAGATGATCTTACAGTTTTGATTGGCTATTGTTATGTTCTACAGTaGAAGAATTCTCATTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVKIAFSLLDDLTVLIGYCYVLQ*KNSHSK Trigger: CTTCGAATGAGAATTCTTCCACTGTAGAACATAACA...ATAGCCAATCAAAACTGTAAGATCATCTAAGAGAGAGAAGGCAATCTTCACCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| 3UTR CAA 72 bp | GGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTaGTTCCATCACTATTATAACTGCAAAACTCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: GRVGPVFWGYLI*FHHYYNCKTLL Trigger: TAAGAGAGTTTTGCAGTTATAATAGTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACCTGCTGTCGCCCGCTTaGTTGAGGGCGCTGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: WCPPSQPQISLPSGVTLHLLSPA*LRALLE Trigger: CTCCAGCAGCGCCCTCAACAAAGCGGGCGACAGCAG...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | TGGTGCCCGCCCTCCCAGCCTCAAATATCCCTGCCCTCTGGTGTAACACTGCACGTGCACCCTTTCCCGTaGCTTCTTTTGGTGGTAGCT | + |
|
Preference number: 5 (lower is better) Translates to: WCPPSQPQISLPSGVTLHVHPFP*LLLVVA Trigger: AGCTACCACCAAAAGAAGCAACGGGAAAGGGTGCAC...GTGCAGTGTTACACCAGAGGGCAGGGATATTTGAGGCTGGGAGGGCGGGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS TCA 90 bp | GCACGGGCTGGCTTCTGCCTGGCATCTGTGATGTTTCGTTCTCTTTaGGTACTGTTTCTAGAGCTTGGGGCTGCTCAGCTTCACCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARAGFCLASVMFRSL*VLFLELGAAQLHLG Trigger: CCCCAGGTGAAGCTGAGCAGCCCCAAGCTCTAGAAACAGTACTCAAAGAGAACGAAACATCACAGATGCCAGGCAGAAGCCAGCCCGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS TCA 90 bp | TTGAGGTTCATGGGCATTTCTGAGACCGTCAGGAGCTTCACAGGGTaGCTTGTTCATTACAGGTGTTGGCACGGGCTGGCTTCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRFMGISETVRSFTG*LVHYRCWHGLASAW Trigger: CCAGGCAGAAGCCAGCCCGTGCCAACACCTGTAATGAACAAGTCACCCTGTGAAGCTCCTGACGGTCTCAGAAATGCCCATGAACCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 90 bp | GCTGCTCAGCTTCACCTGGGGCTTCTACAAGTTGCTGCTGTCCGCTaGTTTCTGCAGATTGGATCCCTTCTATTTCTGGAGAGCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: AAQLHLGLLQVAAVR*FLQIGSLLFLESCS Trigger: AGAACAGCTCTCCAGAAATAGAAGGGATCCAATCTGCAGAAAGCAGCGGACAGCAGCAACTTGTAGAAGCCCCAGGTGAAGCTGAGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS TCA 90 bp | TCCCCGCCTTGCACTAGAGGCTCAATCTTCTTTGTGGGTCTTGAGTaGTCTGTGGCTTCCTTTCCAGGGGTCTCATCATTTGCCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPPCTRGSIFFVGLE*SVASFPGVSSFARD Trigger: ATCTCTGGCAAATGATGAGACCCCTGGAAAGGAAGCCACAGATCACTCAAGACCCACAAAGAAGATTGAGCCTCTAGTGCAAGGCGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 90 bp | TTGTTCCTCTTTATCAGGGTGGATTTCTCTGGCCATTTCCACCTTTaGTGCTGTCTCTCCAGTTTCGGCTGGCTGTACCCTGTTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: LFLFIRVDFSGHFHL*CCLSSFGWLYPVST Trigger: GGTGGAAACAGGGTACAGCCAGCCGAAACTGGAGAGACAGCAGCAAAGGTGGAAATGGCCAGAGAAATCCACCCTGATAAAGAGGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 90 bp | GGAGCTTCACAGGGTGACTTGTTCATTACAGGTGTTGGCACGGGCTaGCTTCTGCCTGGCATCTGTGATGTTTCGTTCTCTTTGAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: GASQGDLFITGVGTG*LLPGICDVSFSLST Trigger: AGTACTCAAAGAGAACGAAACATCACAGATGCCAGGCAGAAGCCAGCCCGTGCCAACACCTGTAATGAACAAGTCACCCTGTGAAGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | ACTCCTTGTATAAACCACAAAGCCGCAGAAAGGTGGTGCCCGCCCTCCCAGCCTATTTGCCAGAGATGGTaGATGGTAGGATTTAACACC | + |
|
Preference number: 5 (lower is better) Translates to: TPCINHKAAERWCPPSQPICQRW*MVGFNT Trigger: GGTGTTAAATCCTACCATCAACCATCTCTGGCAAAT...AGGCTGGGAGGGCGGGCACCACCTTTCTGCGGCTTTGTGGTTTATACAAGGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 90 bp | CCTGGGGCTTCTACAAGTTGCTGCTGTCCGCTGCTTTCTGCAGATTaGATCCCTTCTATTTCTGGAGAGCTGTTCTCTTTGGGAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PGASTSCCCPLLSAD*IPSISGELFSLGIA Trigger: AGCAATTCCCAAAGAGAACAGCTCTCCAGAAATAGAAGGGATCCAATCTGCAGAAAGCAGCGGACAGCAGCAACTTGTAGAAGCCCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 90 bp | GGCATCTGTGATGTTTCGTTCTCTTTGAGTACTGTTTCTAGAGCTTaGGGCTGCTCAGCTTCACCTGGGGCTTCTACAAGTTGCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GICDVSFSLSTVSRA*GCSASPGASTSCCC Trigger: ACAGCAGCAACTTGTAGAAGCCCCAGGTGAAGCTGAGCAGCCCCAAGCTCTAGAAACAGTACTCAAAGAGAACGAAACATCACAGATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | GCGTGCGCCACCACGCCCGGCTCAGTCAAATTTCTATTACAGGACAGAAATATTGCTTCACAGGGTGACTaGTTCATTACAGGTGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ACATTPGSVKFLLQDRNIASQGD*FITGVG Trigger: GCCAACACCTGTAATGAACAAGTCACCCTGTGAAGC...AATATTTCTGTCCTGTAATAGAAATTTGACTGAGCCGGGCGTGGTGGCGCACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 90 bp | TCTCACCTTCAATGTGTTGTTCCTCTTTATCAGGGTGGATTTCTCTaGCCATTTCCACCTTTGCTGCTGTCTCTCCAGTTTCGGCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SHLQCVVPLYQGGFL*PFPPLLLSLQFRLA Trigger: AGCCAGCCGAAACTGGAGAGACAGCAGCAAAGGTGGAAATGGCCAGAGAAATCCACCCTGATAAAGAGGAACAACACATTGAAGGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACCTGTCGCCCGCTTTGTaGAGGGCGCTGCTGGAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILGRVGPVFWGYLILFHHLSPAL*RALLEQ Trigger: CTGCTCCAGCAGCGCCCTCAACAAAGCGGGCGACAG...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACGCCTCCTGGCTGAGGTaGCTCACACTCCCCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: ILGRVGPVFWGYLILFHHASWLR*LTLPAL Trigger: CAAGGCGGGGAGTGTGAGCAACCTCAGCCAGGAGGC...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 90 bp | CTTGCACTAGAGGCTCAATCTTCTTTGTGGGTCTTGAGTGATCTGTaGCTTCCTTTCCAGGGGTCTCATCATTTGCCAGAGATGGTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LALEAQSSLWVLSDL*LPFQGSHHLPEMVD Trigger: ATCAACCATCTCTGGCAAATGATGAGACCCCTGGAAAGGAAGCCACAGATCACTCAAGACCCACAAAGAAGATTGAGCCTCTAGTGCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | TGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCCTCGGAGAGCTGTTCTCTTaGGGAATTGCTTCTAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: WNSLCRSGCPRTQKSSCLGELFS*GIASRI Trigger: GATTCTAGAAGCAATTCCCAAAGAGAACAGCTCTCC...GAGGCAGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTTGTTCTCTTTGGGAATaGCTTCTAGAATCTGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CPGTHFVDLAVLELRNPPCSLWE*LLESGA Trigger: AGCCCCAGATTCTAGAAGCAATTCCCAAAGAGAACA...AGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCAGGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | TGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTGCCTCTGGTCTACACAGAACTaGTTATGTTCTACAGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: WNSLCRSGCPRTQKSSCLWSTQN*LCSTVE Trigger: TTCCACTGTAGAACATAACAAGTTCTGTGTAGACCA...GAGGCAGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | TGTCCTGGAACTCACTTTGTAGATCTGGCTGTCCTCGAACTCAGAAATCCTCCTTGTACATGGTTTAGGTaGGTCTACACAGAACTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: CPGTHFVDLAVLELRNPPCTWFR*VYTELV Trigger: AACAAGTTCTGTGTAGACCAACCTAAACCATGTACA...AGGAGGATTTCTGAGTTCGAGGACAGCCAGATCTACAAAGTGAGTTCCAGGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACTCTTCTTTGTGGGTCTaGAGTGATCTGTGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ILGRVGPVFWGYLILFHHSSLWV*SDLWLP Trigger: AGGAAGCCACAGATCACTCAAGACCCACAAAGAAGA...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS-3UTR CAA 90 bp | ATATTAGGTAGAGTTGGTCCTGTGTTCTGGGGTTATTTAATTTTGTTCCATCACGCTGCTTTCTGCAGATaGGATCCCTTCTATTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ILGRVGPVFWGYLILFHHAAFCR*DPFYFW Trigger: CCAGAAATAGAAGGGATCCAATCTGCAGAAAGCAGC...GTGATGGAACAAAATTAAATAACCCCAGAACACAGGACCAACTCTACCTAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 90 bp | GGCACGGGCTGGCTTCTGCCTGGCATCTGTGATGTTTCGTTCTCTTaGAGTACTGTTTCTAGAGCTTGGGGCTGCTCAGCTTCACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GTGWLLPGICDVSFS*STVSRAWGCSASPG Trigger: CCCAGGTGAAGCTGAGCAGCCCCAAGCTCTAGAAACAGTACTCAAAGAGAACGAAACATCACAGATGCCAGGCAGAAGCCAGCCCGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 90 bp | GGTTCATGGGCATTTCTGAGACCGTCAGGAGCTTCACAGGGTGACTaGTTCATTACAGGTGTTGGCACGGGCTGGCTTCTGCCTGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: GSWAFLRPSGASQGD*FITGVGTGWLLPGI Trigger: GATGCCAGGCAGAAGCCAGCCCGTGCCAACACCTGTAATGAACAAGTCACCCTGTGAAGCTCCTGACGGTCTCAGAAATGCCCATGAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 72 bp | GGCTGCTCAGCTTCACCTGGGGCTTCTACAAGTTGCTaGTGTCCGCTGCTTTCTGCAGATTGGATCCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GCSASPGASTSC*CPLLSADWIPS Trigger: AGAAGGGATCCAATCTGCAGAAAGCAGCGGACAGCAGCAACTTGTAGAAGCCCCAGGTGAAGCTGAGCAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 72 bp | CAGGAGCTTCACAGGGTGACTTGTTCATTACAGGTGTaGGCACGGGCTGGCTTCTGCCTGGCATCTGTGATG | + |
|
Preference number: 6 (lower is better) Translates to: QELHRVTCSLQV*ARAGFCLASVM Trigger: CATCACAGATGCCAGGCAGAAGCCAGCCCGTGCCAACACCTGTAATGAACAAGTCACCCTGTGAAGCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | ACTCCCCGCCTTGCACTAGAGGCTCAATCTTCTTTGTaGGTCTTGAGTGATCTGTGGCTTCCTTTCCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TPRLALEAQSSL*VLSDLWLPFQG Trigger: CCCCTGGAAAGGAAGCCACAGATCACTCAAGACCCACAAAGAAGATTGAGCCTCTAGTGCAAGGCGGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 90 bp | GAGGTTGCTCACACTCCCCGCCTTGCACTAGAGGCTCAATCTTCTTaGTGGGTCTTGAGTGATCTGTGGCTTCCTTTCCAGGGGTCTCAT | + |
|
Preference number: 6 (lower is better) Translates to: EVAHTPRLALEAQSS*WVLSDLWLPFQGSH Trigger: ATGAGACCCCTGGAAAGGAAGCCACAGATCACTCAAGACCCACAAAGAAGATTGAGCCTCTAGTGCAAGGCGGGGAGTGTGAGCAACCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | CAGGGTGACTTGTTCATTACAGGTGTTGGCACGGGCTaGCTTCTGCCTGGCATCTGTGATGTTTCGTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QGDLFITGVGTG*LLPGICDVSFS Trigger: AGAGAACGAAACATCACAGATGCCAGGCAGAAGCCAGCCCGTGCCAACACCTGTAATGAACAAGTCACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 72 bp | CACACTCCCCGCCTTGCACTAGAGGCTCAATCTTCTTaGTGGGTCTTGAGTGATCTGTGGCTTCCTTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: HTPRLALEAQSS*WVLSDLWLPFQ Trigger: CTGGAAAGGAAGCCACAGATCACTCAAGACCCACAAAGAAGATTGAGCCTCTAGTGCAAGGCGGGGAGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 90 bp | CACACTCCCCGCCTTGCACTAGAGGCTCAATCTTCTTTGTGGGTCTaGAGTGATCTGTGGCTTCCTTTCCAGGGGTCTCATCATTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HTPRLALEAQSSLWV*SDLWLPFQGSHHLP Trigger: TGGCAAATGATGAGACCCCTGGAAAGGAAGCCACAGATCACTCAAGACCCACAAAGAAGATTGAGCCTCTAGTGCAAGGCGGGGAGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS TCA 72 bp | GCACCCTTTCCCGTTGCTTCTTTTGGTGGTAGCTCCTaGGTTGTTTCCAGAGGCAGAATGTTCTCGGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: APFPVASFGGSS*VVSRGRMFSAV Trigger: AACAGCCGAGAACATTCTGCCTCTGGAAACAACTCAGGAGCTACCACCAAAAGAAGCAACGGGAAAGGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 72 bp | CTTTCTTCACTTCCTCAGTTCCCAACATATCATCTTTaGCTCCTGGCTGAGGTTGCTCACACTCCCCGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLPQFPTYHL*LLAEVAHTPRL Trigger: AAGGCGGGGAGTGTGAGCAACCTCAGCCAGGAGGCAAAGATGATATGTTGGGAACTGAGGAAGTGAAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 72 bp | TCGTTCTCTTTGAGTACTGTTTCTAGAGCTTGGGGCTaGTCAGCTTCACCTGGGGCTTCTACAAGTTGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSLSTVSRAWG*SASPGASTSCC Trigger: GCAGCAACTTGTAGAAGCCCCAGGTGAAGCTGAGCAGCCCCAAGCTCTAGAAACAGTACTCAAAGAGAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 72 bp | TTTATCAGGGTGGATTTCTCTGGCCATTTCCACCTTTaGTGCTGTCTCTCCAGTTTCGGCTGGCTGTACCCT | + |
|
Preference number: 6 (lower is better) Translates to: FIRVDFSGHFHL*CCLSSFGWLYP Trigger: AGGGTACAGCCAGCCGAAACTGGAGAGACAGCAGCAAAGGTGGAAATGGCCAGAGAAATCCACCCTGATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | CATTTCCACCTTTGCTGCTGTCTCTCCAGTTTCGGCTaGCTGTACCCTGTTTCCACCTGTTACTTGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HFHLCCCLSSFG*LYPVSTCYLRF Trigger: GAACCTCAAGTAACAGGTGGAAACAGGGTACAGCCAGCCGAAACTGGAGAGACAGCAGCAAAGGTGGAAATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS GCA 72 bp | TGGGGCTTCTACAAGTTGCTGCTGTCCGCTGCTTTCTaGAGATTGGATCCCTTCTATTTCTGGAGAGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: WGFYKLLLSAAF*RLDPFYFWRAV Trigger: AACAGCTCTCCAGAAATAGAAGGGATCCAATCTGCAGAAAGCAGCGGACAGCAGCAACTTGTAGAAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | GGAGAGCTGTTCTCTTTGGGAATTGCTTCTAGAATCTaGGGCTGTGCACCCTTTCCCGTTGCTTCTTTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GELFSLGIASRI*GCAPFPVASFG Trigger: ACCAAAAGAAGCAACGGGAAAGGGTGCACAGCCCCAGATTCTAGAAGCAATTCCCAAAGAGAACAGCTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 72 bp | TTGCTTCTAGAATCTGGGGCTGTGCACCCTTTCCCGTaGCTTCTTTTGGTGGTAGCTCCTGAGTTGTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLESGAVHPFP*LLLVVAPELFP Trigger: TGGAAACAACTCAGGAGCTACCACCAAAAGAAGCAACGGGAAAGGGTGCACAGCCCCAGATTCTAGAAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CAA 90 bp | GCTGTGCACCCTTTCCCGTTGCTTCTTTTGGTGGTAGCTCCTGAGTaGTTTCCAGAGGCAGAATGTTCTCGGCTGTTTGTAGAAACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: AVHPFPLLLLVVAPE*FPEAECSRLFVETS Trigger: TGAAGTTTCTACAAACAGCCGAGAACATTCTGCCTCTGGAAACAACTCAGGAGCTACCACCAAAAGAAGCAACGGGAAAGGGTGCACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | GATGTTTCGTTCTCTTTGAGTACTGTTTCTAGAGCTTaGGGCTGCTCAGCTTCACCTGGGGCTTCTACAAGT | + |
|
Preference number: 6 (lower is better) Translates to: DVSFSLSTVSRA*GCSASPGASTS Trigger: ACTTGTAGAAGCCCCAGGTGAAGCTGAGCAGCCCCAAGCTCTAGAAACAGTACTCAAAGAGAACGAAACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | CCTTTGTGTGTTGCCATGAAAGGCAGCTTCTCCTCCTaGTGTACATGGTTTAGGTTGGTCTACACAGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: PLCVAMKGSFSS*CTWFRLVYTEL Trigger: AAGTTCTGTGTAGACCAACCTAAACCATGTACACCAGGAGGAGAAGCTGCCTTTCATGGCAACACACAAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | GGCTTCCTTTCCAGGGGTCTCATCATTTGCCAGAGATaGTTGATGGTAGGATTTAACACCATTTGCTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GFLSRGLIICQR*LMVGFNTICCR Trigger: CCTACAGCAAATGGTGTTAAATCCTACCATCAACCATCTCTGGCAAATGATGAGACCCCTGGAAAGGAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | TCTACAAGTTGCTGCTGTCCGCTGCTTTCTGCAGATTaGATCCCTTCTATTTCTGGAGAGCTGTTCTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: STSCCCPLLSAD*IPSISGELFSL Trigger: CAAAGAGAACAGCTCTCCAGAAATAGAAGGGATCCAATCTGCAGAAAGCAGCGGACAGCAGCAACTTGTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | GTTGCCATGAAAGGCAGCTTCTCCTCCTGGTGTACATaGTTTAGGTTGGTCTACACAGAACTTGTTATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: VAMKGSFSSWCT*FRLVYTELVMF Trigger: GAACATAACAAGTTCTGTGTAGACCAACCTAAACCATGTACACCAGGAGGAGAAGCTGCCTTTCATGGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | CAATGTGTTGTTCCTCTTTATCAGGGTGGATTTCTCTaGCCATTTCCACCTTTGCTGCTGTCTCTCCAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: QCVVPLYQGGFL*PFPPLLLSLQF Trigger: AAACTGGAGAGACAGCAGCAAAGGTGGAAATGGCCAGAGAAATCCACCCTGATAAAGAGGAACAACACATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||
| CDS CCA 72 bp | AAGGCAGCTTCTCCTCCTGGTGTACATGGTTTAGGTTaGTCTACACAGAACTTGTTATGTTCTACAGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: KAASPPGVHGLG*STQNLLCSTVE Trigger: TTCCACTGTAGAACATAACAAGTTCTGTGTAGACCAACCTAAACCATGTACACCAGGAGGAGAAGCTGCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060894.9 |
||