Pregenerated sensors for ERICH4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074261Ensembl transcript IDs: ENSMUST00000098663.4, ENSMUST00000238895.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTCCCAAATCTGCAATCACACCTGCCCACAGCACCCAGGTCCCTaGCAGGATCTCCAACTGTTTTGTGGGTCTGCCGAAGGAGCACCC | + |
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Preference number: 1 (lower is better) Translates to: PSQICNHTCPQHPGP*QDLQLFCGSAEGAP Trigger: GGGTGCTCCTTCGGCAGACCCACAAAACAGTTGGAGATCCTGGCAGGGACCTGGGTGCTGTGGGCAGGTGTGATTGCAGATTTGGGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 90 bp | CCAGGTCACACTGCAACATCTCTACAGACACACGGGTGGCTTTTGTaGCCCTCCCAAATCTGCAATCACACCTGCCCACAGCACCCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PGHTATSLQTHGWLL*PSQICNHTCPQHPG Trigger: ACCTGGGTGCTGTGGGCAGGTGTGATTGCAGATTTGGGAGGGGCACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 90 bp | CAAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTaGAACATCTCTACAGACACACGGGTGGCTTTTGTGCCCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: QDSVTSAKHLVSRSH*NISTDTRVAFVPLP Trigger: TGGGAGGGGCACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 90 bp | CCATGGGGCCTACCACACTACGCAGAATTGGTCTTCAAACCTGTCTaGCAAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: PWGLPHYAELVFKPV*QDSVTSAKHLVSRS Trigger: TGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTGCGTAGTGTGGTAGGCCCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 90 bp | CCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATTaGTTACCGGCCATGGGGCCTACCACACTACGCAGAATTGGTCTT | + |
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Preference number: 1 (lower is better) Translates to: PLSTSHLSPNPPRFN*LPAMGPTTLRRIGL Trigger: AAGACCAATTCTGCGTAGTGTGGTAGGCCCCATGGCCGGTAAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CCA 90 bp | TCTTCAAACCTGTCTGCCAAGATTCTGTCACTTCAGCCAAGCACCTaGTCTCCAGGTCACACTGCAACATCTCTACAGACACACGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SSNLSAKILSLQPST*SPGHTATSLQTHGW Trigger: CCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CAA 90 bp | TCTCCAGGTCACACTGCAACATCTCTACAGACACACGGGTGGCTTTaGTGCCCCTCCCAAATCTGCAATCACACCTGCCCACAGCACCCA | + |
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Preference number: 2 (lower is better) Translates to: SPGHTATSLQTHGWL*CPSQICNHTCPQHP Trigger: TGGGTGCTGTGGGCAGGTGTGATTGCAGATTTGGGAGGGGCACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR GCA 90 bp | ACCACAGAGGTGTTTGACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACCAGCACCCAGGTCCCTaGCAGGATCTCCAACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TTEVFDLCPPLISVRTHHQHPGP*QDLQLF Trigger: AAACAGTTGGAGATCCTGGCAGGGACCTGGGTGCTG...GTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGTCAAACACCTCTGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CAA 90 bp | ACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATaGCTTACCGGCCATGGGGCCTACCACACTACGCAGAATTGGTCT | + |
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Preference number: 2 (lower is better) Translates to: TFVHLSSQSEPTTFQ*LTGHGAYHTTQNWS Trigger: AGACCAATTCTGCGTAGTGTGGTAGGCCCCATGGCCGGTAAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR GCA 90 bp | ACGCAGAATTGGTCTTCAAACCTGTCTGCCAAGATTCTGTCACTTCAGCCAAGCCAGCACCCAGGTCCCTaGCAGGATCTCCAACTGTTT | + |
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Preference number: 2 (lower is better) Translates to: TQNWSSNLSAKILSLQPSQHPGP*QDLQLF Trigger: AAACAGTTGGAGATCCTGGCAGGGACCTGGGTGCTG...GCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTGCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR GCA 90 bp | ACGCAGAATTGGTCTTCAAACCTGTCTGCCAAGATTCTGTCACTTCAGCCAAGCGTCTCCAGGTCACACTaGAACATCTCTACAGACACA | + |
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Preference number: 2 (lower is better) Translates to: TQNWSSNLSAKILSLQPSVSRSH*NISTDT Trigger: TGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGAC...GCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATTGCTTCACACTACGCAGAATTaGTCTTCAAACCTGTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: LTFVHLSSQSEPTTFQLLHTTQN*SSNLSA Trigger: GGCAGACAGGTTTGAAGACCAATTCTGCGTAGTGTG...AAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTTACCACAGAGGTGTTTGACCTTTGTCCACCTCTCATCTCAGTCCGAACCCGTCTTCAAACCTGTCTaGCAAGATTCTGTCACTTCA | + |
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Preference number: 2 (lower is better) Translates to: VLPQRCLTFVHLSSQSEPVFKPV*QDSVTS Trigger: TGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGAC...GGGTTCGGACTGAGATGAGAGGTGGACAAAGGTCAAACACCTCTGTGGTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 72 bp | TGGCTTTTGTGCCCCTCCCAAATCTGCAATCACACCTaGCCACAGCACCCAGGTCCCTGCCAGGATCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: WLLCPSQICNHT*PQHPGPCQDLQ Trigger: TTGGAGATCCTGGCAGGGACCTGGGTGCTGTGGGCAGGTGTGATTGCAGATTTGGGAGGGGCACAAAAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CCA 72 bp | GCACCCAGGTCCCTGCCAGGATCTCCAACTGTTTTGTaGGTCTGCCGAAGGAGCACCCTTGATTCTCAATCT | + |
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Preference number: 3 (lower is better) Translates to: APRSLPGSPTVL*VCRRSTLDSQS Trigger: AGATTGAGAATCAAGGGTGCTCCTTCGGCAGACCCACAAAACAGTTGGAGATCCTGGCAGGGACCTGGGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR CAA 90 bp | TGCCAAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTGCAACGGATCTCCAACTGTTTaGTGGGTCTGCCGAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: CQDSVTSAKHLVSRSHCNGSPTV*WVCRRS Trigger: GCTCCTTCGGCAGACCCACAAAACAGTTGGAGATCC...GTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 72 bp | GTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTaGAACATCTCTACAGACACACGGGTGGCTTTTGTG | + |
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Preference number: 3 (lower is better) Translates to: VTSAKHLVSRSH*NISTDTRVAFV Trigger: CACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CCA 72 bp | CCAGGTCACACTGCAACATCTCTACAGACACACGGGTaGCTTTTGTGCCCCTCCCAAATCTGCAATCACACC | + |
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Preference number: 3 (lower is better) Translates to: PGHTATSLQTHG*LLCPSQICNHT Trigger: GGTGTGATTGCAGATTTGGGAGGGGCACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR CAA 90 bp | AAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTGCAACATCTACACACGGGTGGCTTTaGTGCCCCTCCCAAATCTGC | + |
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Preference number: 3 (lower is better) Translates to: KILSLQPSTWSPGHTATSTHGWL*CPSQIC Trigger: GCAGATTTGGGAGGGGCACAAAAGCCACCCGTGTGT...AGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 72 bp | AGGTCCCTGCCAGGATCTCCAACTGTTTTGTGGGTCTaGCGAAGGAGCACCCTTGATTCTCAATCTCCGTTT | + |
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Preference number: 3 (lower is better) Translates to: RSLPGSPTVLWV*RRSTLDSQSPF Trigger: AAACGGAGATTGAGAATCAAGGGTGCTCCTTCGGCAGACCCACAAAACAGTTGGAGATCCTGGCAGGGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CCA 72 bp | CTGTCTGCCAAGATTCTGTCACTTCAGCCAAGCACCTaGTCTCCAGGTCACACTGCAACATCTCTACAGACA | + |
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Preference number: 3 (lower is better) Translates to: LSAKILSLQPST*SPGHTATSLQT Trigger: TGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCAGACAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CCA 72 bp | CTTACCGGCCATGGGGCCTACCACACTACGCAGAATTaGTCTTCAAACCTGTCTGCCAAGATTCTGTCACTT | + |
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Preference number: 3 (lower is better) Translates to: LTGHGAYHTTQN*SSNLSAKILSL Trigger: AAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTGCGTAGTGTGGTAGGCCCCATGGCCGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR CAA 90 bp | CCAAGCACCTGGTCTCCAGGTCACACTGCAACATCTCTACAGACACACGGGTGGTTCCTTTGCATGAATTaGCATCTCATTTGCGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: PSTWSPGHTATSLQTHGWFLCMN*HLICVS Trigger: TGACACGCAAATGAGATGCAAATTCATGCAAAGGAA...CCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR GCA 72 bp | CTACCACACTACGCAGAATTGGTCTTCAAACCTGTCTaGCAAGATTCTGTCACTTCAGCCAAGCACCTGGTC | + |
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Preference number: 3 (lower is better) Translates to: LPHYAELVFKPV*QDSVTSAKHLV Trigger: GACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTGCGTAGTGTGGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR-3UTR CAA 90 bp | AAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTGCAACATCTTTCCTTTGCATGAATTaGCATCTCATTTGCGTGTCA | + |
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Preference number: 3 (lower is better) Translates to: KILSLQPSTWSPGHTATSFLCMN*HLICVS Trigger: TGACACGCAAATGAGATGCAAATTCATGCAAAGGAA...AGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR GCA 90 bp | TGCCAAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTGCAACGGCTCCAGTCCAGCCTaGTTCAGCTGCACCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: CQDSVTSAKHLVSRSHCNGSSPA*FSCTHG Trigger: GCCGTGGGTGCAGCTGAAGCAGGCTGGACTGGAGCC...GTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | CAGACACACGGGTGGCTTTTGTGCCCCTCCCAAATCTGCAATCACACCTGCCCAGTGGACCCAATCCACTaGGCTCCAGTCCAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QTHGWLLCPSQICNHTCPVDPIH*APVQPA Trigger: AGCAGGCTGGACTGGAGCCCAGTGGATTGGGTCCAC...TGGGCAGGTGTGATTGCAGATTTGGGAGGGGCACAAAAGCCACCCGTGTGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGTCCCTGCCAGGATCTCCAACTGTTTTGTGGGTCTGCCGAAGGAGCACCATAGAATCAGCTCCCTaGCACCCCCAAGTTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: PRSLPGSPTVLWVCRRSTIESAP*HPQVLP Trigger: GGGCAGAACTTGGGGGTGCCAGGGAGCTGATTCTAT...GGTGCTCCTTCGGCAGACCCACAAAACAGTTGGAGATCCTGGCAGGGACCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR TCA 90 bp | CCAAGCACCTGGTCTCCAGGTCACACTGCAACATCTCTACAGACACACGGGTGGCCCAAGTTCTGCCCCTaGAGACATAAGGGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: PSTWSPGHTATSLQTHGWPKFCP*RHKGLT Trigger: GGTCAGGCCCTTATGTCTTCAGGGGCAGAACTTGGG...CCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | GGTCACACTGCAACATCTCTACAGACACACGGGTGGCTTTTGTGCCCCTCCCAAGCACCCTTAGGGCCTTaGGGAGTGGACCCAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: GHTATSLQTHGWLLCPSQAPLGP*GVDPIH Trigger: GTGGATTGGGTCCACTCCCCAAGGCCCTAAGGGTGC...TTGGGAGGGGCACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR GCA 90 bp | GACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATTGCTTACGGCTCCAGTCCAGCCTaGTTCAGCTGCACCCACGGC | + |
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Preference number: 4 (lower is better) Translates to: DLCPPLISVRTHHVSIAYGSSPA*FSCTHG Trigger: GCCGTGGGTGCAGCTGAAGCAGGCTGGACTGGAGCC...GTAAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | TGCCAAGATTCTGTCACTTCAGCCAAGCACCTGGTCTCCAGGTCACACTGCAACGCACCCTTAGGGCCTTaGGGAGTGGACCCAATCCAC | + |
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Preference number: 4 (lower is better) Translates to: CQDSVTSAKHLVSRSHCNAPLGP*GVDPIH Trigger: GTGGATTGGGTCCACTCCCCAAGGCCCTAAGGGTGC...GTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAAGTGACAGAATCTTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCCAAGCACCTGGTCTCCAGGTCACACTGCAACATCTCTACAGACACACGAGCTGTCCCAACAGCTaGACATCCACTCGTCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: FSQAPGLQVTLQHLYRHTSCPNS*TSTRRR Trigger: CCTGCGACGAGTGGATGTCCAGCTGTTGGGACAGCT...CGTGTGTCTGTAGAGATGTTGCAGTGTGACCTGGAGACCAGGTGCTTGGCTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CAA 72 bp | ACAGCACCCAGGTCCCTGCCAGGATCTCCAACTGTTTaGTGGGTCTGCCGAAGGAGCACCCTTGATTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: TAPRSLPGSPTV*WVCRRSTLDSQ Trigger: TTGAGAATCAAGGGTGCTCCTTCGGCAGACCCACAAAACAGTTGGAGATCCTGGCAGGGACCTGGGTGCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| 3UTR CAA 72 bp | CACACTGCAACATCTCTACAGACACACGGGTGGCTTTaGTGCCCCTCCCAAATCTGCAATCACACCTGCCCA | + |
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Preference number: 4 (lower is better) Translates to: HTATSLQTHGWL*CPSQICNHTCP Trigger: TGGGCAGGTGTGATTGCAGATTTGGGAGGGGCACAAAAGCCACCCGTGTGTCTGTAGAGATGTTGCAGTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | CAGAATTGGTCTTCAAACCTGTCTGCCAAGATTCTGTCACTTCAGCCAAGCACCGTGGACCCAATCCACTaGGCTCCAGTCCAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QNWSSNLSAKILSLQPSTVDPIH*APVQPA Trigger: AGCAGGCTGGACTGGAGCCCAGTGGATTGGGTCCAC...GGTGCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR TCA 90 bp | ACGCAGAATTGGTCTTCAAACCTGTCTGCCAAGATTCTGTCACTTCAGCCAAGCCCCAAGTTCTGCCCCTaGAGACATAAGGGCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: TQNWSSNLSAKILSLQPSPKFCP*RHKGLT Trigger: GGTCAGGCCCTTATGTCTTCAGGGGCAGAACTTGGG...GCTTGGCTGAAGTGACAGAATCTTGGCAGACAGGTTTGAAGACCAATTCTGCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CCA 90 bp | TTGACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATTGCTTAGCTGTCCCAACAGCTaGACATCCACTCGTCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LTFVHLSSQSEPTTFQLLSCPNS*TSTRRR Trigger: CCTGCGACGAGTGGATGTCCAGCTGTTGGGACAGCT...AAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS CCA 90 bp | GGGCCTGACCGGGGTTCCCTTCTGGCGGGGGCACCCTTAGGGCCTTaGGGAGTGGACCCAATCCACTGGGCTCCAGTCCAGCCTGCTTCA | + |
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Preference number: 5 (lower is better) Translates to: GPDRGSLLAGAPLGP*GVDPIHWAPVQPAS Trigger: TGAAGCAGGCTGGACTGGAGCCCAGTGGATTGGGTCCACTCCCCAAGGCCCTAAGGGTGCCCCCGCCAGAAGGGAACCCCGGTCAGGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CAA 90 bp | GACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATTGCTTACGGCACCCTTAGGGCCTaGGGGAGTGGACCCAATCCA | + |
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Preference number: 5 (lower is better) Translates to: DLCPPLISVRTHHVSIAYGTLRA*GSGPNP Trigger: TGGATTGGGTCCACTCCCCAAGGCCCTAAGGGTGCC...GTAAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS-3UTR CAA 90 bp | TTGACCTTTGTCCACCTCTCATCTCAGTCCGAACCCACCACGTTTCAATTGCTTGGCACCCTTAGGGCCTaGGGGAGTGGACCCAATCCA | + |
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Preference number: 5 (lower is better) Translates to: LTFVHLSSQSEPTTFQLLGTLRA*GSGPNP Trigger: TGGATTGGGTCCACTCCCCAAGGCCCTAAGGGTGCC...AAGCAATTGAAACGTGGTGGGTTCGGACTGAGATGAGAGGTGGACAAAGGTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS CCA 72 bp | GCACCCTTAGGGCCTTGGGGAGTGGACCCAATCCACTaGGCTCCAGTCCAGCCTGCTTCAGCTGCACCCACG | + |
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Preference number: 6 (lower is better) Translates to: APLGPWGVDPIH*APVQPASAAPT Trigger: CGTGGGTGCAGCTGAAGCAGGCTGGACTGGAGCCCAGTGGATTGGGTCCACTCCCCAAGGCCCTAAGGGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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| CDS GCA 72 bp | GGGAGTGGACCCAATCCACTGGGCTCCAGTCCAGCCTaGTTCAGCTGCACCCACGGCTCCATAGTCCGAACC | + |
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Preference number: 6 (lower is better) Translates to: GSGPNPLGSSPA*FSCTHGSIVRT Trigger: GGTTCGGACTATGGAGCCGTGGGTGCAGCTGAAGCAGGCTGGACTGGAGCCCAGTGGATTGGGTCCACTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238895.2 |
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| CDS CAA 72 bp | CGGGAACGTTCTTCGTCCTGCTTCTCCTCGGGCCCTTaGTTCTCTTCAACACAGCTCTTCTCCTCCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RERSSSCFSSGP*FSSTQLFSSCS Trigger: GGAGCAGGAGGAGAAGAGCTGTGTTGAAGAGAACAAAGGGCCCGAGGAGAAGCAGGACGAAGAACGTTCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098663.4 ENSMUST00000238895.2 |
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