Pregenerated sensors for ERICH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051978Ensembl transcript IDs: ENSMUST00000110813.5, ENSMUST00000211242.2
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTATCCCAATTTCTCACTTCAAGTCTCAGGTGATACCTTGCCTATaGTATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCA | + |
|
Preference number: 1 (lower is better) Translates to: FIPISHFKSQVIPCL*YTNTGINNVVEMSS Trigger: TGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATATCATAGGCAAGGTATCACCTGAGACTTGAAGTGAGAAATTGGGATAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| 3UTR-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGCTTTGTAGACCAGGCTaGCCTCCAACTCAGAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: YTNTGINNVVEMSSMSPVLCRPG*PPTQKS Trigger: AGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAAAG...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| 3UTR GCA 72 bp | TGTAGACCAGGCTGGCCTCCAACTCAGAAATCTGCCTaGCTCTGCCTCCCGAGTGCTGGGATTAGAGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRPGWPPTQKSA*LCLPSAGIRGV Trigger: CACACCTCTAATCCCAGCACTCGGGAGGCAGAGGCAGGCAGATTTCTGAGTTGGAGGCCAGCCTGGTCTACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR GCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGGTACGCCCTCCGCCCTaGTGCTGGCCAGCTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVVRPPP*CWPAQC Trigger: ACATTGAGCTGGCCAGCAGCAGGGCGGAGGGCGTAC...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGTGGTGTCTCGGAGGCTaGAGGCTGGGGAGTCCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVWCLGG*RLGSPL Trigger: AAGGGGACTCCCCAGCCTCCAGCCTCCGAGACACCA...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR TCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGCCGGACTCAAGGAGGTaGAGCAGCTCTTCAGCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVPDSRR*SSSSAV Trigger: GACCGCTGAAGAGCTGCTTCACCTCCTTGAGTCCGG...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR GCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGATCATCTTCAGCCTCTaGCTCCTCGCTGCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVIIFSL*LLAALG Trigger: CCCGAGAGCAGCGAGGAGGCAGAGGCTGAAGATGAT...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGGGTCACATCCTTGGATaGTGTCTCGGAGGCTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVGHILG*CLGGWR Trigger: CCTCCAGCCTCCGAGACACCATCCAAGGATGTGACC...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR GCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGGGAGGCATCGTACAGTaGTCTGGGAACATCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVGGIVQ*SGNISR Trigger: CCTGGAGATGTTCCCAGAGCACTGTACGATGCCTCC...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGCATCGTACAGTGCTCTaGGAACATCTCCAGGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVHRTVL*EHLQGA Trigger: AGCGCCCTGGAGATGTTCCCAGAGCACTGTACGATG...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR GCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGAGTCTCTCAGTGTCCTaGAGAAGCAGCAGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVSLSVS*RSSRVF Trigger: GAAAACCCTGCTGCTTCTGCAGGACACTGAGAGACT...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR GCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGATCCTTCTGCTGTACTaGTTCAGGGGTCACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVILLLY*FRGHIL Trigger: AAGGATGTGACCCCTGAAGCAGTACAGCAGAAGGAT...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGAGCCGACGTTCAGGCTaGATCTTAATGTCACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVSRRSG*ILMSPS Trigger: AGATGGTGACATTAAGATCCAGCCTGAACGTCGGCT...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGGTGATTATCTTGGCATaGTCTGGAGGCATCGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVVIILA*SGGIVQ Trigger: CTGTACGATGCCTCCAGACCATGCCAAGATAATCAC...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR TCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGGGAGTCCCCTTTTCTTaGCCATTTGAAACATTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVGVPFS*PFETLG Trigger: CCCTAATGTTTCAAATGGTCAAGAAAAGGGGACTCC...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR GCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGTCTGGATGCTGTGGGTaGATTTTCTTTTGTTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVSGCCG*IFFCWV Trigger: GACCCAACAAAAGAAAATGCACCCACAGCATCCAGA...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGCAGCTGGATCGTCTCTaGGAGTATCATCGTAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVQLDRL*EYHRRN Trigger: ATTTCTACGATGATACTCCCAGAGACGATCCAGCTG...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGAATTCTTCGTCTTTTTaGTTGCTCAGGAAGTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVNSSSF*LLRKFQ Trigger: CTGGAACTTCCTGAGCAACCAAAAAGACGAAGAATT...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGTGCATTTTCTTTTGTTaGGTCTCTAGTTCGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVCIFFC*VSSSVC Trigger: GCAAACCGAACTAGAGACCCAACAAAAGAAAATGCA...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR TCA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGCTTTTCTTGACCATTTaGAACATTAGGGAAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTNTGINNVVEMSSMSPVLFLTI*NIREKP Trigger: AGGCTTTTCCCTAATGTTTCAAATGGTCAAGAAAAG...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS TCA 90 bp | TCTCAGTGTCCTGCAGAAGCAGCAGGGTTTTCATGTGGTCCAGGATaGGCACGTCCGCGGGAGGCATGCCTCCGGACTCAAGGAGGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQCPAEAAGFSCGPG*ARPREACLRTQGGE Trigger: TTCACCTCCTTGAGTCCGGAGGCATGCCTCCCGCGGACGTGCTCATCCTGGACCACATGAAAACCCTGCTGCTTCTGCAGGACACTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CCA 90 bp | CTCTTCAGTCTCTCAGTGTCCTGCAGAAGCAGCAGGGTTTTCATGTaGTCCAGGATGAGCACGTCCGCGGGAGGCATGCCTCCGGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: LFSLSVSCRSSRVFM*SRMSTSAGGMPPDS Trigger: TGAGTCCGGAGGCATGCCTCCCGCGGACGTGCTCATCCTGGACCACATGAAAACCCTGCTGCTTCTGCAGGACACTGAGAGACTGAAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 90 bp | TGCTCTGGGAACATCTCCAGGGCGCTCTTCAGTCTCTCAGTGTCCTaGAGAAGCAGCAGGGTTTTCATGTGGTCCAGGATGAGCACGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSGNISRALFSLSVS*RSSRVFMWSRMSTS Trigger: GGACGTGCTCATCCTGGACCACATGAAAACCCTGCTGCTTCTGCAGGACACTGAGAGACTGAAGAGCGCCCTGGAGATGTTCCCAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CCA 90 bp | CTTCTGTGTCACCACCGCTGGAGGCATTCTCAGAATCCGCACAGCTaGTCGGTTCGGGCAAACAGGGGATATACCCTTGAGGAGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLCHHRWRHSQNPHS*SVRANRGYTLEEAN Trigger: GTTTGCCTCCTCAAGGGTATATCCCCTGTTTGCCCGAACCGACCAGCTGTGCGGATTCTGAGAATGCCTCCAGCGGTGGTGACACAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS CCA 90 bp | GGCTGTGATTATCTTGGCATGGTCTGGAGGCATCGTACAGTGCTCTaGGAACATCTCCAGGGCGCTCTTCAGTCTCTCAGTGTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GCDYLGMVWRHRTVL*EHLQGALQSLSVLQ Trigger: CTGCAGGACACTGAGAGACTGAAGAGCGCCCTGGAGATGTTCCCAGAGCACTGTACGATGCCTCCAGACCATGCCAAGATAATCACAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 90 bp | CTTAATGTCACCATCTGTCAGACTGTGAGCATCCTTCTGCTGTACTaGTTCAGGGGTCACATCCTTGGATGGTGTCTCGGAGGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LNVTICQTVSILLLY*FRGHILGWCLGGWR Trigger: CCTCCAGCCTCCGAGACACCATCCAAGGATGTGACCCCTGAAGCAGTACAGCAGAAGGATGCTCACAGTCTGACAGATGGTGACATTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS GCA 90 bp | AAGAAGGCTGTGATTATCTTGGCATGGTCTGGAGGCATCGTACAGTaGTCTGGGAACATCTCCAGGGCGCTCTTCAGTCTCTCAGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKAVIILAWSGGIVQ*SGNISRALFSLSVS Trigger: GGACACTGAGAGACTGAAGAGCGCCCTGGAGATGTTCCCAGAGCACTGTACGATGCCTCCAGACCATGCCAAGATAATCACAGCCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CCA 90 bp | TTTTTGGTTGCTCAGGAAGTTCCAGATCTTCTGTGTCACCACCGCTaGAGGCATTCTCAGAATCCGCACAGCTGGTCGGTTCGGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FLVAQEVPDLLCHHR*RHSQNPHSWSVRAN Trigger: GTTTGCCCGAACCGACCAGCTGTGCGGATTCTGAGAATGCCTCCAGCGGTGGTGACACAGAAGATCTGGAACTTCCTGAGCAACCAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS TCA 90 bp | AGCCGACGTTCAGGCTGGATCTTAATGTCACCATCTGTCAGACTGTaGGCATCCTTCTGCTGTACTGCTTCAGGGGTCACATCCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SRRSGWILMSPSVRL*ASFCCTASGVTSLD Trigger: ATCCAAGGATGTGACCCCTGAAGCAGTACAGCAGAAGGATGCTCACAGTCTGACAGATGGTGACATTAAGATCCAGCCTGAACGTCGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS-3UTR CAA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGTCAGGGGTCACATCCTaGGATGGTGTCTCGGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: YTNTGINNVVEMSSMSPVSGVTS*DGVSEA Trigger: AGCCTCCGAGACACCATCCAAGGATGTGACCCCTGA...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS-3UTR CAA 90 bp | TATACAAACACAGGAATAAATAACGTGGTAGAAATGTCTTCAATGTCTCCAGTGTCTTCGTCTTTTTGGTaGCTCAGGAAGTTCCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: YTNTGINNVVEMSSMSPVSSSFW*LRKFQI Trigger: GATCTGGAACTTCCTGAGCAACCAAAAAGACGAAGA...CACTGGAGACATTGAAGACATTTCTACCACGTTATTTATTCCTGTGTTTGTATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS TCA 72 bp | CCTGCAGAAGCAGCAGGGTTTTCATGTGGTCCAGGATaGGCACGTCCGCGGGAGGCATGCCTCCGGACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAEAAGFSCGPG*ARPREACLRTQ Trigger: TTGAGTCCGGAGGCATGCCTCCCGCGGACGTGCTCATCCTGGACCACATGAAAACCCTGCTGCTTCTGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CCA 72 bp | CATCCTTCTGCTGTACTGCTTCAGGGGTCACATCCTTaGATGGTGTCTCGGAGGCTGGAGGCTGGGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HPSAVLLQGSHP*MVSRRLEAGES Trigger: GGACTCCCCAGCCTCCAGCCTCCGAGACACCATCCAAGGATGTGACCCCTGAAGCAGTACAGCAGAAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS CCA 72 bp | CTCTCAGTGTCCTGCAGAAGCAGCAGGGTTTTCATGTaGTCCAGGATGAGCACGTCCGCGGGAGGCATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: LSVSCRSSRVFM*SRMSTSAGGMP Trigger: AGGCATGCCTCCCGCGGACGTGCTCATCCTGGACCACATGAAAACCCTGCTGCTTCTGCAGGACACTGAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CAA 72 bp | GCATCCTTCTGCTGTACTGCTTCAGGGGTCACATCCTaGGATGGTGTCTCGGAGGCTGGAGGCTGGGGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ASFCCTASGVTS*DGVSEAGGWGV Trigger: GACTCCCCAGCCTCCAGCCTCCGAGACACCATCCAAGGATGTGACCCCTGAAGCAGTACAGCAGAAGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS CCA 72 bp | CACCACCGCTGGAGGCATTCTCAGAATCCGCACAGCTaGTCGGTTCGGGCAAACAGGGGATATACCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: HHRWRHSQNPHS*SVRANRGYTLE Trigger: CTCAAGGGTATATCCCCTGTTTGCCCGAACCGACCAGCTGTGCGGATTCTGAGAATGCCTCCAGCGGTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS CCA 72 bp | GCTCAGGAAGTTCCAGATCTTCTGTGTCACCACCGCTaGAGGCATTCTCAGAATCCGCACAGCTGGTCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: AQEVPDLLCHHR*RHSQNPHSWSV Trigger: AACCGACCAGCTGTGCGGATTCTGAGAATGCCTCCAGCGGTGGTGACACAGAAGATCTGGAACTTCCTGAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 72 bp | AACATCTCCAGGGCGCTCTTCAGTCTCTCAGTGTCCTaGAGAAGCAGCAGGGTTTTCATGTGGTCCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: NISRALFSLSVS*RSSRVFMWSRM Trigger: CATCCTGGACCACATGAAAACCCTGCTGCTTCTGCAGGACACTGAGAGACTGAAGAGCGCCCTGGAGATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 72 bp | GTGATTATCTTGGCATGGTCTGGAGGCATCGTACAGTaGTCTGGGAACATCTCCAGGGCGCTCTTCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VIILAWSGGIVQ*SGNISRALFSL Trigger: GAGACTGAAGAGCGCCCTGGAGATGTTCCCAGAGCACTGTACGATGCCTCCAGACCATGCCAAGATAATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CCA 72 bp | TATCTTGGCATGGTCTGGAGGCATCGTACAGTGCTCTaGGAACATCTCCAGGGCGCTCTTCAGTCTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: YLGMVWRHRTVL*EHLQGALQSLS Trigger: ACTGAGAGACTGAAGAGCGCCCTGGAGATGTTCCCAGAGCACTGTACGATGCCTCCAGACCATGCCAAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 72 bp | ACCATCTGTCAGACTGTGAGCATCCTTCTGCTGTACTaGTTCAGGGGTCACATCCTTGGATGGTGTCTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: TICQTVSILLLY*FRGHILGWCLG Trigger: TCCGAGACACCATCCAAGGATGTGACCCCTGAAGCAGTACAGCAGAAGGATGCTCACAGTCTGACAGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS TCA 72 bp | TCAGGCTGGATCTTAATGTCACCATCTGTCAGACTGTaGGCATCCTTCTGCTGTACTGCTTCAGGGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: SGWILMSPSVRL*ASFCCTASGVT Trigger: TGTGACCCCTGAAGCAGTACAGCAGAAGGATGCTCACAGTCTGACAGATGGTGACATTAAGATCCAGCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110813.5 ENSMUST00000211242.2 |
||
| CDS CCA 72 bp | CTTCAGCGGTCTCTGGGCACACAGCTGGATCGTCTCTaGGAGTATCATCGTAGAAATAAAGTTCTTGTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LQRSLGTQLDRL*EYHRRNKVLVL Trigger: CAACACAAGAACTTTATTTCTACGATGATACTCCCAGAGACGATCCAGCTGTGTGCCCAGAGACCGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CAA 72 bp | CTCTGGGAGTATCATCGTAGAAATAAAGTTCTTGTGTaGACTTCAGAAAACTCAGTACGCCCTCCGCCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: LWEYHRRNKVLV*TSENSVRPPPC Trigger: GCAGGGCGGAGGGCGTACTGAGTTTTCTGAAGTCAACACAAGAACTTTATTTCTACGATGATACTCCCAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS TCA 72 bp | TCTGGGAGTATCATCGTAGAAATAAAGTTCTTGTGTTaGCTTCAGAAAACTCAGTACGCCCTCCGCCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGSIIVEIKFLC*LQKTQYALRPA Trigger: AGCAGGGCGGAGGGCGTACTGAGTTTTCTGAAGTCAACACAAGAACTTTATTTCTACGATGATACTCCCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 72 bp | TTTGATTTGTGTCTTCTAATTCTTCGTCTTTTTGGTTaGTCAGGAAGTTCCAGATCTTCTGTGTCACCACCG | + |
|
Preference number: 6 (lower is better) Translates to: FDLCLLILRLFG*SGSSRSSVSPP Trigger: CGGTGGTGACACAGAAGATCTGGAACTTCCTGAGCAACCAAAAAGACGAAGAATTAGAAGACACAAATCAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS GCA 72 bp | GGGTGCATTTTCTTTTGTTGGGTCTCTAGTTCGGTTTaGCTTACAATAACGTCACTGAGGTTTGTAATATTC | + |
|
Preference number: 6 (lower is better) Translates to: GCIFFCWVSSSV*LTITSLRFVIF Trigger: GAATATTACAAACCTCAGTGACGTTATTGTAAGGCAAACCGAACTAGAGACCCAACAAAAGAAAATGCACCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110813.5 |
||
| CDS CAA 72 bp | ATTCTTCGTCTTTTTGGTTGCTCAGGAAGTTCCAGATaGTTTTTAATAAGCTTAGTTCCTGAATTCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ILRLFGCSGSSR*FLISLVPEFLP Trigger: AGGAAGGAATTCAGGAACTAAGCTTATTAAAAACAATCTGGAACTTCCTGAGCAACCAAAAAGACGAAGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000211242.2 |
||