Pregenerated sensors for ERI3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033423Ensembl transcript IDs: ENSMUST00000037127.15, ENSMUST00000125312.2, ENSMUST00000144373.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACTCTCCCTTTTCCCTCTGGTGAGGGAGAGGAGGATTCTGGTTTaGGCCAAGCAGCTACCCTGTCCTGCCCCATCCCGTCCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: PLSLFPLVRERRILV*AKQLPCPAPSRPLP Trigger: TGGCAGAGGACGGGATGGGGCAGGACAGGGTAGCTGCTTGGCCCAAACCAGAATCCTCCTCTCCCTCACCAGAGGGAAAAGGGAGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR CCA 90 bp | CACAGCTCAGCCCAGAGATTCAGAAGAAAAAGCTCTGTGTATGTTTaGAAGACACCAATAGTACTCCTCCCAGCAGCCGGACCCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: HSSAQRFRRKSSVYV*KTPIVLLPAAGPSG Trigger: GCCTGAGGGTCCGGCTGCTGGGAGGAGTACTATTGGTGTCTTCCAAACATACACAGAGCTTTTTCTTCTGAATCTCTGGGCTGAGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGGGGCCAAGTGGCCATaGCCTCACACAGGGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHGAKWP*PHTGHK Trigger: CTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR GCA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACCTGGGCGCAGAGCTGTaGCACTCTCCCTTTTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHLGAEL*HSPFSL Trigger: GAGGGAAAAGGGAGAGTGGCACAGCTCTGCGCCCAG...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CCA 90 bp | AAGTGTCTGCTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCAGCTGGGGGACACTCTaGGCGCAGAGCTGTGCCACT | + |
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Preference number: 2 (lower is better) Translates to: KCLLQRGQVAMPSHRAQASWGTL*AQSCAT Trigger: AGTGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCT...GGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAGCAGACACTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR CAA 90 bp | GCCACTCTCCCTTTTCCCTCTGGTGAGGGAGAGGAGGATTCTGGTTaGGGCCAAGCAGCTACCCTGTCCTGCCCCATCCCGTCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: ATLPFPSGEGEEDSG*GQAATLSCPIPSSA Trigger: GGCAGAGGACGGGATGGGGCAGGACAGGGTAGCTGCTTGGCCCAAACCAGAATCCTCCTCTCCCTCACCAGAGGGAAAAGGGAGAGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CCA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACACTGAGGAATGGGAGTaGGGTGGGGCACAAAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHTEEWE*GGAQSV Trigger: GACACTTTGTGCCCCACCCCACTCCCATTCCTCAGT...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCCAAGGAGGATTCTGGTTTaGGCCAAGCAGCTACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RAQACRAAGGHSGRRAVPRRILV*AKQLPC Trigger: ACAGGGTAGCTGCTTGGCCCAAACCAGAATCCTCCT...TGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR GCA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGCAGCTACCCTGTCCTaGCCCATCCCGTCCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: TLGPCFPDFIQVARSQQGAATLS*PIPSSA Trigger: GGCAGAGGACGGGATGGGGCAGGACAGGGTAGCTGC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CCA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGGAATGGGAGTGGGGTaGGGCACAAAGTGTCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TLGPCFPDFIQVARSQQGGMGVG*GTKCLL Trigger: GAGCAGACACTTTGTGCCCCACCCCACTCCCATTCC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CAA 90 bp | AAGTGTCTGCTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCGAGGAGGATTCTGGTTaGGGCCAAGCAGCTACCCTG | + |
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Preference number: 3 (lower is better) Translates to: KCLLQRGQVAMPSHRAQAEEDSG*GQAATL Trigger: CAGGGTAGCTGCTTGGCCCAAACCAGAATCCTCCTC...GGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAGCAGACACTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR CCA 72 bp | CTTTTCCCTCTGGTGAGGGAGAGGAGGATTCTGGTTTaGGCCAAGCAGCTACCCTGTCCTGCCCCATCCCGT | + |
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Preference number: 3 (lower is better) Translates to: LFPLVRERRILV*AKQLPCPAPSR Trigger: ACGGGATGGGGCAGGACAGGGTAGCTGCTTGGCCCAAACCAGAATCCTCCTCTCCCTCACCAGAGGGAAAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CAA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGGGCACAGGGAGGGCTaGGTGGCCCCAGCAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: TLGPCFPDFIQVARSQQGGHREG*VAPAEA Trigger: GGCTTCTGCTGGGGCCACCAAGCCCTCCCTGTGCCC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR TCA 72 bp | CCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGATaGGGGGAGGGTGGACACAAGGTGGGGCCTGATCTG | + |
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Preference number: 3 (lower is better) Translates to: PDFIQVARSQQG*GEGGHKVGPDL Trigger: CAGATCAGGCCCCACCTTGTGTCCACCCTCCCCTCATCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| 3UTR-3UTR CAA 90 bp | GGGCTGGCAGTAAGGTCTGCACAGAGCATAAAGAACTATACCCAACAGACTGCCAAGCTCTGTGTATGTTaGGAAGACACCAATAGTACT | + |
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Preference number: 3 (lower is better) Translates to: GLAVRSAQSIKNYTQQTAKLCVC*EDTNST Trigger: AGTACTATTGGTGTCTTCCAAACATACACAGAGCTT...GGCAGTCTGTTGGGTATAGTTCTTTATGCTCTGTGCAGACCTTACTGCCAGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
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| CDS-3UTR GCA 90 bp | CACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCAATGCCCAGGGTGTTaGCCCCAGCTCGGGCCCATC | + |
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Preference number: 4 (lower is better) Translates to: HRAQACRAAGGHSGRRAVQCPGC*PQLGPI Trigger: GATGGGCCCGAGCTGGGGGCAACACCCTGGGCATTG...CACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | GGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCCACTGGGGCCGGCCTATGTaGTGCAGGCTGAGACCCTTG | + |
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Preference number: 4 (lower is better) Translates to: GHKPVGQLGDTLGAELCHWGRPM*CRLRPL Trigger: CAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCA...GTGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | GTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGCCGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: VAMPSHRAQACRAAGGHSAAPKP*AASFLV Trigger: CACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGC...AGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | GGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCCACACCCTCTCCAGCACTTaGTGCAGGCTTGGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: GHKPVGQLGDTLGAELCHTLSST*CRLGWP Trigger: TGGCCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGT...GTGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | CACAAAGTGTCTGCTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACACACCATTGCCGCCATTaGCGCGCCAAAGCCGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: HKVSAPEGPSGHALTQGTHHCRH*RAKAVG Trigger: GCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTG...TGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAGCAGACACTTTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCAGGGTCTGTGAGAGCTaGAAAGCCCCAATGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PCPHTGHKPVGQLGDTLGRVCES*KAPMPR Trigger: CCTGGGCATTGGGGCTTTCCAGCTCTCACAGACCCT...GCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | AGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCCACTGAGGGTGGATCTGTaGCTTGTCGCATGTGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: RAQACRAAGGHSGRRAVPLRVDL*LVACGL Trigger: GAGGCCACATGCGACAAGCCACAGATCCACCCTCAG...TGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | TGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGTCATCAATGCCGCTGTaGGGCCGGCCTATGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WPCPHTGHKPVGQLGDTLSSMPL*GRPMCC Trigger: GCAGCACATAGGCCGGCCCCACAGCGGCATTGATGA...CAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR TCA 90 bp | AGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCCACCATCCACCATGGCTTaGATGATCCCGGTGAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: RAQACRAAGGHSGRRAVPPSTMA*MIPVSS Trigger: AGAGCTCACCGGGATCATTCAAGCCATGGTGGATGG...TGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | GTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTTCTTGCAGTCATCAATaGCGCTGTGGGGCCGGCCTA | + |
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Preference number: 4 (lower is better) Translates to: VAMPSHRAQACRAAGGHSSCSHQ*RCGAGL Trigger: TAGGCCGGCCCCACAGCGGCATTGATGACTGCAAGA...AGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGGGGTAAGCTGTGGGTaGACTACAGGCTGGACATAC | + |
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Preference number: 4 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHGVSCG*TTGWTY Trigger: GTATGTCCAGCCTGTAGTCCACCCACAGCTTACCCC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGGCTTTCTGGTGGATATaGAACAGAGCTCCGGAACGC | + |
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Preference number: 4 (lower is better) Translates to: HRAQACRAAGGHSGRRAVAFWWI*NRAPER Trigger: GCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGC...CACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | GTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCCGCCAGCTTTCTaGTGGATATGGAACAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: VAMPSHRAQACRAAGGHSGPPAF*WIWNRA Trigger: AGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCC...AGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | AAGACACCAATAGTACTCCTCCCAGCAGCCGGACCCTCAGGCAGCTCCCACTCCCACTTGCTGCAGGCTTaGCTGGCCATCCACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: KTPIVLLPAAGPSGSSHSHLLQA*LAIHHG Trigger: GCCATGGTGGATGGCCAGCCAAGCCTGCAGCAAGTG...GGAGTGGGAGCTGCCTGAGGGTCCGGCTGCTGGGAGGAGTACTATTGGTGTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
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| CDS-3UTR TCA 90 bp | CTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAATGCTGAAGGGTCTGTaGGAGCTGGAAAGCCCCAAT | + |
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Preference number: 4 (lower is better) Translates to: LQRGQVAMPSHRAQACRAMLKGL*ELESPN Trigger: ATTGGGGCTTTCCAGCTCTCACAGACCCTTCAGCAT...TGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR TCA 90 bp | GGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCCACGGCTGGACATACATGTaGAAGGTAGACTCGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: GHKPVGQLGDTLGAELCHGWTYM*KVDSIS Trigger: GGAAATCGAGTCTACCTTTCACATGTATGTCCAGCC...GTGGCACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR TCA 90 bp | CACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGCTATGTGCTGCAGGCTaGGACCCTTGTTCATGTCTA | + |
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Preference number: 4 (lower is better) Translates to: HRAQACRAAGGHSGRRAVLCAAG*DPCSCL Trigger: TAGACATGAACAAGGGTCTCAGCCTGCAGCACATAG...CACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCACGAAGATGCCAAGACTaGCAGCTGGAGATGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: LQRGQVAMPSHRAQACRARRCQD*QLEMLK Trigger: CTTCAGCATCTCCAGCTGCCAGTCTTGGCATCTTCG...TGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR TCA 90 bp | GTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGATGGGGAACTCAATaGTTTCCTGAGGGTGGATCT | + |
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Preference number: 4 (lower is better) Translates to: VAMPSHRAQACRAAGGHSGWGTQ*FPEGGS Trigger: AGATCCACCCTCAGGAAATCATTGAGTTCCCCATCC...AGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CACAAAGTGTCTGCTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACACCGCCAGCTTTCTGGTaGATATGGAACAGAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: HKVSAPEGPSGHALTQGTPPAFW*IWNRAP Trigger: CGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGG...TGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAGCAGACACTTTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | GTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTAAGGGCTTTGATGTCTaGTTGAAGATGAAGCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VAMPSHRAQACRAAGGHSKGFDV*LKMKPR Trigger: CCGAGGCTTCATCTTCAAGCAGACATCAAAGCCCTT...AGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | GTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTTGTTGGCAATGTTCTTaGAGTCATCAATGCCGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VAMPSHRAQACRAAGGHSCWQCS*SHQCRC Trigger: ACAGCGGCATTGATGACTGCAAGAACATTGCCAACA...AGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGATGAAGCCTCGGTATaGCAATGTCTTCATGATGTT | + |
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Preference number: 4 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHDEASV*QCLHDV Trigger: AACATCATGAAGACATTGGCATACCGAGGCTTCATC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAATAATGGCACTGTCCTaGAAGCATGACTTTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: LQRGQVAMPSHRAQACRAIMALS*KHDFQV Trigger: GACCTGAAAGTCATGCTTCCAGGACAGTGCCATTAT...TGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CTCTCCCTTTTCCCTCTGGTGAGGGAGAGGAGGATTCTGGTTTGGGCCAAGCAGTGGGCCAGCAGCCCATaGCGAAGCTGTAAGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LSLFPLVRERRILVWAKQWASSP*RSCKPF Trigger: AAAAGGCTTACAGCTTCGCCATGGGCTGCTGGCCCA...CTGCTTGGCCCAAACCAGAATCCTCCTCTCCCTCACCAGAGGGAAAAGGGAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR TCA 90 bp | TGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGATGCCAATGTCTTCATaGTGTTGGCAATGTTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: WPCPHTGHKPVGQLGDTLMPMSS*CWQCSC Trigger: GCAAGAACATTGCCAACATCATGAAGACATTGGCAT...CAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGCTGGAAAGCCCCAATaGCCAGGGTGTTGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TLGPCFPDFIQVARSQQGAGKPQ*PGCCPQ Trigger: CTGGGGGCAACACCCTGGGCATTGGGGCTTTCCAGC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | CTCTCCCTTTTCCCTCTGGTGAGGGAGAGGAGGATTCTGGTTTGGGCCAAGCAGTCCTTACTTCGAAGATaGCAAGACTGGCAGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: LSLFPLVRERRILVWAKQSLLRR*QDWQLE Trigger: CTCCAGCTGCCAGTCTTGGCATCTTCGAAGTAAGGA...CTGCTTGGCCCAAACCAGAATCCTCCTCTCCCTCACCAGAGGGAAAAGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR GCA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGGCCGGCCTATGTGCTaGAGGCTGAGACCCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: TLGPCFPDFIQVARSQQGGRPMC*RLRPLF Trigger: GAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CCAGACACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCACTTGCTGCAGGCTTaGCTGGCCATCCACCATGGC | + |
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Preference number: 4 (lower is better) Translates to: PDTLGPCFPDFIQVARSQHLLQA*LAIHHG Trigger: GCCATGGTGGATGGCCAGCCAAGCCTGCAGCAAGTG...CTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGTGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | CCAGACACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGGAAGGGGGTAAGCTGTaGGTGGACTACAGGCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PDTLGPCFPDFIQVARSQEGGKL*VDYRLD Trigger: GTCCAGCCTGTAGTCCACCCACAGCTTACCCCCTTC...CTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGTGTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS-3UTR CCA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGACTAGTAGTCCATTCTTaGGCCAGCAGCCCATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPCFPDFIQVARSQQGLVVHS*ASSPWR Trigger: TCGCCATGGGCTGCTGGCCCAAGAATGGACTACTAG...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR TCA 90 bp | CCAGACACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGACTGTCCTGGAAGCATaGCTTTCAGGTCCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PDTLGPCFPDFIQVARSQTVLEA*LSGPSL Trigger: GAGACTGGGACCTGAAAGTCATGCTTCCAGGACAGT...CTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGTGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CCA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGTGGCTTGTCGCATGTaGCCTCAAAGTCCAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TLGPCFPDFIQVARSQQGVACRM*PQSPAL Trigger: TAGTGCTGGACTTTGAGGCCACATGCGACAAGCCAC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTCAACTAGAACCATATTTCTCCTAGTGACTACACAGCTCAGCCCAGAGGAGAACCAAAGGCCCTaGGAGGAGCTCAGAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: KGSTRTIFLLVTTQLSPEENQRP*EELRGT Trigger: GGTACCTCTGAGCTCCTCCCAGGGCCTTTGGTTCTC...CTCTGGGCTGAGCTGTGTAGTCACTAGGAGAAATATGGTTCTAGTTGAGCCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR TCA 90 bp | GTGACTACACAGCTCAGCCCAGAGATTCAGAAGAAAAAGCTCTGTGTATGTTTGCCATCCACCATGGCTTaGATGATCCCGGTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VTTQLSPEIQKKKLCVCLPSTMA*MIPVSS Trigger: AGAGCTCACCGGGATCATTCAAGCCATGGTGGATGG...CAAACATACACAGAGCTTTTTCTTCTGAATCTCTGGGCTGAGCTGTGTAGTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR CCA 90 bp | CCAGACACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGATAACAAGTaGGAGCCCAGCACTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PDTLGPCFPDFIQVARSQQGDNK*EPSTFL Trigger: AAGAAAAGTGCTGGGCTCCCACTTGTTATCTCCCTG...CTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGTGTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| 3UTR CAA 72 bp | AGCCCAGAGATTCAGAAGAAAAAGCTCTGTGTATGTTaGGAAGACACCAATAGTACTCCTCCCAGCAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPEIQKKKLCVC*EDTNSTPPSSR Trigger: CCGGCTGCTGGGAGGAGTACTATTGGTGTCTTCCAAACATACACAGAGCTTTTTCTTCTGAATCTCTGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGAAGAAAAAGCTCTGTGTATGTTTGGAAGACACCAATAGTACTCCTCCCAAGTTGGGGGTGGTGGTaGAGGACAGGAGAACCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FRRKSSVYVWKTPIVLLPSWGWW*RTGEPK Trigger: CTTTGGTTCTCCTGTCCTTCACCACCACCCCCAACT...TGGGAGGAGTACTATTGGTGTCTTCCAAACATACACAGAGCTTTTTCTTCTGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR TCA 90 bp | ATTCAGAAGAAAAAGCTCTGTGTATGTTTGGAAGACACCAATAGTACTCCTCCCACTGTCCTGGAAGCATaGCTTTCAGGTCCCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IQKKKLCVCLEDTNSTPPTVLEA*LSGPSL Trigger: GAGACTGGGACCTGAAAGTCATGCTTCCAGGACAGT...GGGAGGAGTACTATTGGTGTCTTCCAAACATACACAGAGCTTTTTCTTCTGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGAAGAAAAAGCTCTGTGTATGTTTGGAAGACACCAATAGTACTCCTCCCAATAATGGCACTGTCCTaGAAGCATGACTTTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FRRKSSVYVWKTPIVLLPIMALS*KHDFQV Trigger: GACCTGAAAGTCATGCTTCCAGGACAGTGCCATTAT...TGGGAGGAGTACTATTGGTGTCTTCCAAACATACACAGAGCTTTTTCTTCTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACGACCCTCTCCAGCACTaGCTGCAGGCTTGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHDPLQH*LQAWLA Trigger: GGCCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTC...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS CCA 90 bp | TGGGGAGGGAAGGGCACCATTGCCGCCATTGCCGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTGGATATGGAACAGAGCTCCGGAACG | + |
|
Preference number: 5 (lower is better) Translates to: WGGKGTIAAIAAPKP*AASFLVDMEQSSGT Trigger: CGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGCCCTTCCCTCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCCATCCACCATGGCTaGAATGATCCCGGTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQRGQVAMPSHRAQACRAAIHHG*NDPGEL Trigger: GAGCTCACCGGGATCATTCAAGCCATGGTGGATGGC...TGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | TGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGTCTAGTAGTCCATTCTaGGGCCAGCAGCCCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: WPCPHTGHKPVGQLGDTLSSSPF*GQQPMA Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTACTAGA...CAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS CCA 90 bp | CCATTGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATaGAACAGAGCTCCGGAACGCCACAGGGAGATAACAAGTGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLPRQSRGPPAFWWI*NRAPERHREITSGS Trigger: GCTCCCACTTGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CCA 90 bp | CCATTGCCGCCATTGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTaGTGGATATGGAACAGAGCTCCGGAACGCCACAGGGAGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: PLPPLPRQSRGPPAF*WIWNRAPERHREIT Trigger: TGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS TCA 90 bp | CTTCGAAGATGCCAAGACTGGCAGCTGGAGATGCTGAAGGGTCTGTaGGAGCTGGAAAGCCCCAATGCCCAGGGTGTTGCCCCCAGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LRRCQDWQLEMLKGL*ELESPNAQGVAPSS Trigger: CGAGCTGGGGGCAACACCCTGGGCATTGGGGCTTTCCAGCTCTCACAGACCCTTCAGCATCTCCAGCTGCCAGTCTTGGCATCTTCGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS GCA 90 bp | AAAGTAGTGATACCTCTGGGGAGGGAAGGGCACCATTGCCGCCATTaGCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVVIPLGREGHHCRH*RAKAVGRQLSGGYG Trigger: TCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGCCCTTCCCTCCCCAGAGGTATCACTACTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CCA 90 bp | TTGCCGCCATTGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTaGATATGGAACAGAGCTCCGGAACGCCACAGGGAGATAACAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LPPLPRQSRGPPAFW*IWNRAPERHREITS Trigger: ACTTGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS-3UTR CAA 90 bp | CCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGGCTTTGATGTCTGCTaGAAGATGAAGCCTCGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: PCPHTGHKPVGQLGDTLGGFDVC*KMKPRY Trigger: ATACCGAGGCTTCATCTTCAAGCAGACATCAAAGCC...GCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS TCA 90 bp | TGCAGTCATCAATGCCGCTGTGGGGCCGGCCTATGTGCTGCAGGCTaGGACCCTTGTTCATGTCTAGTAGTCCATTCTTGGGCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSHQCRCGAGLCAAG*DPCSCLVVHSWASS Trigger: GCTGCTGGCCCAAGAATGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTGATGACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | CCAGACACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCCAATGCCCAGGGTGTaGCCCCCAGCTCGGGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PDTLGPCFPDFIQVARSQPMPRV*PPARAH Trigger: ATGGGCCCGAGCTGGGGGCAACACCCTGGGCATTGG...CTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGTGTCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAGCACCATTGCCGCCATaGCCGCGCCAAAGCCGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TLGPCFPDFIQVARSQQGAPLPP*PRQSRG Trigger: CCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGC...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTGCTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCTGCAGGCTGAGACCCTaGTTCATGTCTAGTAGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KCLLQRGQVAMPSHRAQACRLRP*FMSSSP Trigger: TGGACTACTAGACATGAACAAGGGTCTCAGCCTGCA...GGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAGCAGACACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | AAGACACCAATAGTACTCCTCCCAGCAGCCGGACCCTCAGGCAGCTCCCACTCCAAAAAGACACCAGAGTaGGGGGTGGTGGTGAAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: KTPIVLLPAAGPSGSSHSKKTPE*GVVVKD Trigger: GTCCTTCACCACCACCCCCAACTCTGGTGTCTTTTT...GGAGTGGGAGCTGCCTGAGGGTCCGGCTGCTGGGAGGAGTACTATTGGTGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGACACAAGGTGGGGCCTGATCTGTCCTGGAGCCCTGGGGGCACCACACACAGCCCAGCACTTTTCTaGCTCTTGAAAGTAAATATG | + |
|
Preference number: 5 (lower is better) Translates to: GGHKVGPDLSWSPGGTTHSPALF*LLKVNM Trigger: CATATTTACTTTCAAGAGCAAGAAAAGTGCTGGGCT...GTGTGTGGTGCCCCCAGGGCTCCAGGACAGATCAGGCCCCACCTTGTGTCCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | CTCCAGAGGGGCCAAGTGGCCATGCCCTCACACAGGGCACAAGCCTGTAGGGCAGTGACAAAGATTGACTaGACGTTTGGATCTAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQRGQVAMPSHRAQACRAVTKID*TFGSKR Trigger: CCTCTTAGATCCAAACGTCAAGTCAATCTTTGTCAC...TGCCCTACAGGCTTGTGCCCTGTGTGAGGGCATGGCCACTTGGCCCCTCTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCACAAGCCTGTAGGGCAGCTGGGGGACACTCTGGGCGCAGAGCTGTGAATGTCTTCATGATGTaGGCAATGTTCTTGCAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: HRAQACRAAGGHSGRRAVNVFMM*AMFLQS Trigger: TGACTGCAAGAACATTGCCAACATCATGAAGACATT...CACAGCTCTGCGCCCAGAGTGTCCCCCAGCTGCCCTACAGGCTTGTGCCCTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS TCA 90 bp | AACTCTCCTTACTTCGAAGATGCCAAGACTGGCAGCTGGAGATGCTaGAGGGTCTGTGAGAGCTGGAAAGCCCCAATGCCCAGGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NSPYFEDAKTGSWRC*RVCESWKAPMPRVL Trigger: CAACACCCTGGGCATTGGGGCTTTCCAGCTCTCACAGACCCTTCAGCATCTCCAGCTGCCAGTCTTGGCATCTTCGAAGTAAGGAGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS GCA 90 bp | ATGTTCTTGCAGTCATCAATGCCGCTGTGGGGCCGGCCTATGTGCTaGAGGCTGAGACCCTTGTTCATGTCTAGTAGTCCATTCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MFLQSSMPLWGRPMC*RLRPLFMSSSPFLG Trigger: GCCCAAGAATGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTGATGACTGCAAGAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | CTCTCCCTTTTCCCTCTGGTGAGGGAGAGGAGGATTCTGGTTTGGGCCAAGCAGGTAACGGCGCTAGCATaGAACATCCAGAGGCATCTA | + |
|
Preference number: 5 (lower is better) Translates to: LSLFPLVRERRILVWAKQVTALA*NIQRHL Trigger: TAGATGCCTCTGGATGTTCAATGCTAGCGCCGTTAC...CTGCTTGGCCCAAACCAGAATCCTCCTCTCCCTCACCAGAGGGAAAAGGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS TCA 90 bp | AACTCTCCTTACTTCGAAGATGCCAAGACTGGCAGCTGGAGATGCTaGAGGGTCTGTGAGAGCTGGAAAGCCCCAATGCTGTGGACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NSPYFEDAKTGSWRC*RVCESWKAPMLWTD Trigger: GTCTGTCCACAGCATTGGGGCTTTCCAGCTCTCACAGACCCTTCAGCATCTCCAGCTGCCAGTCTTGGCATCTTCGAAGTAAGGAGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144373.2 |
||
| CDS GCA 90 bp | GCAATGTTCTTGCAGTCATCAATGCCGCTGTGGGGCCGGCCTATGTaGTGCAGGCTGAGACCCTTGTTCATGTCTAGTAGTCCATTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AMFLQSSMPLWGRPM*CRLRPLFMSSSPFL Trigger: CAAGAATGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTGATGACTGCAAGAACATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | CCAGACACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGGGGTGGATCTGTGGCTaGTCGCATGTGGCCTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PDTLGPCFPDFIQVARSQGWICG*SHVASK Trigger: CTTTGAGGCCACATGCGACAAGCCACAGATCCACCC...CTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGTGTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS CCA 90 bp | GGCTTGAATGATCCCGGTGAGCTCTGTACAGAAGGGGGTAAGCTGTaGGTGGACTACAGGCTGGACATACATGTGAAAGGTAGACTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLNDPGELCTEGGKL*VDYRLDIHVKGRLD Trigger: ATCGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCACCCACAGCTTACCCCCTTCTGTACAGAGCTCACCGGGATCATTCAAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS-3UTR CAA 90 bp | ACCATATTTCTCCTAGTGACTACACAGCTCAGCCCAGAGATTCAGAAGAAAAAGGACCCTCTCCAGCACTaGCTGCAGGCTTGGCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TIFLLVTTQLSPEIQKKKDPLQH*LQAWLA Trigger: GGCCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTC...CTTTTTCTTCTGAATCTCTGGGCTGAGCTGTGTAGTCACTAGGAGAAATATGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR CAA 90 bp | GTGACTACACAGCTCAGCCCAGAGATTCAGAAGAAAAAGCTCTGTGTATGTTTGGCCATCCACCATGGCTaGAATGATCCCGGTGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VTTQLSPEIQKKKLCVCLAIHHG*NDPGEL Trigger: GAGCTCACCGGGATCATTCAAGCCATGGTGGATGGC...CAAACATACACAGAGCTTTTTCTTCTGAATCTCTGGGCTGAGCTGTGTAGTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS-3UTR CAA 90 bp | ACACTAGGACCTTGTTTCCCCGACTTTATTCAAGTGGCACGTTCACAGCAGGGAATGTTGGCAATGTTCTaGCAGTCATCAATGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TLGPCFPDFIQVARSQQGMLAMF*QSSMPL Trigger: CAGCGGCATTGATGACTGCAAGAACATTGCCAACAT...TCCCTGCTGTGAACGTGCCACTTGAATAAAGTCGGGGAAACAAGGTCCTAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
||
| CDS CCA 90 bp | GTGGATATGGAACAGAGCTCCGGAACGCCACAGGGAGATAACAAGTaGGAGCCCAGCACTTTTCTTGCTCTTGAAAGTAAATATGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VDMEQSSGTPQGDNK*EPSTFLALESKYEE Trigger: CTCTTCATATTTACTTTCAAGAGCAAGAAAAGTGCTGGGCTCCCACTTGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTCAACTAGAACCATATTTCTCCTAGTGACTACACAGCTCAGCCCAGAGGTGACAAAGATTGACTaGACGTTTGGATCTAAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGSTRTIFLLVTTQLSPEVTKID*TFGSKR Trigger: CCTCTTAGATCCAAACGTCAAGTCAATCTTTGTCAC...CTCTGGGCTGAGCTGTGTAGTCACTAGGAGAAATATGGTTCTAGTTGAGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125312.2 |
||
| CDS GCA 72 bp | ATACCTCTGGGGAGGGAAGGGCACCATTGCCGCCATTaGCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: IPLGREGHHCRH*RAKAVGRQLSG Trigger: ACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGCCCTTCCCTCCCCAGAGGTAT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CCA 72 bp | TTGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTaGATATGGAACAGAGCTCCGGAACGCCACAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPRQSRGPPAFW*IWNRAPERHRE Trigger: CTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CCA 72 bp | CCATTGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTaGTGGATATGGAACAGAGCTCCGGAACGCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPRQSRGPPAF*WIWNRAPERHR Trigger: CCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CCA 72 bp | AAGGGCACCATTGCCGCCATTGCCGCGCCAAAGCCGTaGGCCGCCAGCTTTCTGGTGGATATGGAACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KGTIAAIAAPKP*AASFLVDMEQS Trigger: GCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGCCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CAA 90 bp | CCAGCACTAAAAAGTAGTGATACCTCTGGGGAGGGAAGGGCACCATaGCCGCCATTGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PALKSSDTSGEGRAP*PPLPRQSRGPPAFW Trigger: CCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGCCCTTCCCTCCCCAGAGGTATCACTACTTTTTAGTGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
||
| CDS CAA 90 bp | AAAAGTAGTGATACCTCTGGGGAGGGAAGGGCACCATTGCCGCCATaGCCGCGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATGG | + |
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Preference number: 6 (lower is better) Translates to: KSSDTSGEGRAPLPP*PRQSRGPPAFWWIW Trigger: CCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCGCGGCAATGGCGGCAATGGTGCCCTTCCCTCCCCAGAGGTATCACTACTTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
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| CDS CAA 90 bp | TCAATGCCGCTGTGGGGCCGGCCTATGTGCTGCAGGCTGAGACCCTaGTTCATGTCTAGTAGTCCATTCTTGGGCCAGCAGCCCATGGCG | + |
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Preference number: 6 (lower is better) Translates to: SMPLWGRPMCCRLRP*FMSSSPFLGQQPMA Trigger: CGCCATGGGCTGCTGGCCCAAGAATGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS CCA 72 bp | CGCCAAAGCCGTGGGCCGCCAGCTTTCTGGTGGATATaGAACAGAGCTCCGGAACGCCACAGGGAGATAACA | + |
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Preference number: 6 (lower is better) Translates to: RQSRGPPAFWWI*NRAPERHREIT Trigger: TGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTCCATATCCACCAGAAAGCTGGCGGCCCACGGCTTTGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
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| CDS CCA 72 bp | CCACTCATCGACCCTCTCCAGCACTTGCTGCAGGCTTaGCTGGCCATCCACCATGGCTTGAATGATCCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PLIDPLQHLLQA*LAIHHGLNDPG Trigger: ACCGGGATCATTCAAGCCATGGTGGATGGCCAGCCAAGCCTGCAGCAAGTGCTGGAGAGGGTCGATGAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000125312.2 |
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| CDS CAA 72 bp | CTGTGGGGCCGGCCTATGTGCTGCAGGCTGAGACCCTaGTTCATGTCTAGTAGTCCATTCTTGGGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LWGRPMCCRLRP*FMSSSPFLGQQ Trigger: CTGCTGGCCCAAGAATGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS TCA 72 bp | CAATGCCGCTGTGGGGCCGGCCTATGTGCTGCAGGCTaGGACCCTTGTTCATGTCTAGTAGTCCATTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: QCRCGAGLCAAG*DPCSCLVVHSW Trigger: CCAAGAATGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS GCA 72 bp | CAGTCATCAATGCCGCTGTGGGGCCGGCCTATGTGCTaGAGGCTGAGACCCTTGTTCATGTCTAGTAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: QSSMPLWGRPMC*RLRPLFMSSSP Trigger: TGGACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTGATGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS GCA 72 bp | TTGCAGTCATCAATGCCGCTGTGGGGCCGGCCTATGTaGTGCAGGCTGAGACCCTTGTTCATGTCTAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LQSSMPLWGRPM*CRLRPLFMSSS Trigger: ACTACTAGACATGAACAAGGGTCTCAGCCTGCAGCACATAGGCCGGCCCCACAGCGGCATTGATGACTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS CCA 72 bp | GATCCCGGTGAGCTCTGTACAGAAGGGGGTAAGCTGTaGGTGGACTACAGGCTGGACATACATGTGAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: DPGELCTEGGKL*VDYRLDIHVKG Trigger: ACCTTTCACATGTATGTCCAGCCTGTAGTCCACCCACAGCTTACCCCCTTCTGTACAGAGCTCACCGGGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037127.15 |
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| CDS CAA 90 bp | CGCCACAGGGAGATAACAAGTGGGAGCCCAGCACTTTTCTTGCTCTaGAAAGTAAATATGAAGAGAACCGAGCCGCTCCCGTCTGTAACG | + |
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Preference number: 6 (lower is better) Translates to: RHREITSGSPALFLL*KVNMKRTEPLPSVT Trigger: CGTTACAGACGGGAGCGGCTCGGTTCTCTTCATATTTACTTTCAAGAGCAAGAAAAGTGCTGGGCTCCCACTTGTTATCTCCCTGTGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
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| CDS CAA 90 bp | AGCATGACTTTCAGGTCCCAGTCTCCGCAGGTGACAAAGATTGACTaGACGTTTGGATCTAAGAGGCCTTCCTTCGCCATCCACTCATCG | + |
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Preference number: 6 (lower is better) Translates to: SMTFRSQSPQVTKID*TFGSKRPSFAIHSS Trigger: CGATGAGTGGATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCAATCTTTGTCACCTGCGGAGACTGGGACCTGAAAGTCATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000125312.2 |
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| CDS CAA 72 bp | TTCAGGTCCCAGTCTCCGCAGGTGACAAAGATTGACTaGACGTTTGGATCTAAGAGGCCTTCCTTCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: FRSQSPQVTKID*TFGSKRPSFAI Trigger: GATGGCGAAGGAAGGCCTCTTAGATCCAAACGTCAAGTCAATCTTTGTCACCTGCGGAGACTGGGACCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000125312.2 |
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| CDS TCA 72 bp | GTAAGCTGTGGGTGGACTACAGGCTGGACATACATGTaGAAGGTAGACTCGATTTCCATGGTCCGGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: VSCGWTTGWTYM*KVDSISMVRPF Trigger: AAATGGCCGGACCATGGAAATCGAGTCTACCTTTCACATGTATGTCCAGCCTGTAGTCCACCCACAGCTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
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| CDS CCA 72 bp | GAACAGAGCTCCGGAACGCCACAGGGAGATAACAAGTaGGAGCCCAGCACTTTTCTTGCTCTTGAAAGTAAA | + |
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Preference number: 6 (lower is better) Translates to: EQSSGTPQGDNK*EPSTFLALESK Trigger: TTTACTTTCAAGAGCAAGAAAAGTGCTGGGCTCCCACTTGTTATCTCCCTGTGGCGTTCCGGAGCTCTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037127.15 ENSMUST00000144373.2 |
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