Pregenerated sensors for ERI2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030929Ensembl transcript IDs: ENSMUST00000033224.14, ENSMUST00000063902.14, ENSMUST00000106523.8, ENSMUST00000139192.8, ENSMUST00000150844.3
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGCTCTGAATCCCCAGCAGCAAAGCTGATCGTCTGCTGCTGCTaGAGCTTATGGATCCATTTACAGAACTGGGACAAGCAAATCTTC | + |
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Preference number: 1 (lower is better) Translates to: EGSESPAAKLIVCCC*SLWIHLQNWDKQIF Trigger: GAAGATTTGCTTGTCCCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR GCA 90 bp | GTAGAAGGCTCTGAATCCCCAGCAGCAAAGCTGATCGTCTGCTGCTaGTGCAGCTTATGGATCCATTTACAGAACTGGGACAAGCAAATC | + |
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Preference number: 1 (lower is better) Translates to: VEGSESPAAKLIVCC*CSLWIHLQNWDKQI Trigger: GATTTGCTTGTCCCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR GCA 90 bp | GAAGTAGAAGGCTCTGAATCCCCAGCAGCAAAGCTGATCGTCTGCTaGTGCTGCAGCTTATGGATCCATTTACAGAACTGGGACAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: EVEGSESPAAKLIVC*CCSLWIHLQNWDKQ Trigger: TTGCTTGTCCCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR GCA 90 bp | TCAGAAGTAGAAGGCTCTGAATCCCCAGCAGCAAAGCTGATCGTCTaGTGCTGCTGCAGCTTATGGATCCATTTACAGAACTGGGACAAG | + |
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Preference number: 1 (lower is better) Translates to: SEVEGSESPAAKLIV*CCCSLWIHLQNWDK Trigger: CTTGTCCCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR TCA 90 bp | CCATGTAACAAAAGCACACAGTTTCACTTCAGAAGTAGAAGGCTCTaGATCCCCAGCAGCAAAGCTGATCGTCTGCTGCTGCTGCAGCTT | + |
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Preference number: 1 (lower is better) Translates to: PCNKSTQFHFRSRRL*IPSSKADRLLLLQL Trigger: AAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCTGAAGTGAAACTGTGTGCTTTTGTTACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR TCA 90 bp | TTTGTGTCACTAACAGGAGGCATACAGTCTGTGTCTGGCTCAGCCTaGGATGCTGGCAGTAAAACTACATCTTCCCACTCAGCCAACATC | + |
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Preference number: 1 (lower is better) Translates to: FVSLTGGIQSVSGSA*DAGSKTTSSHSANI Trigger: GATGTTGGCTGAGTGGGAAGATGTAGTTTTACTGCCAGCATCTCAGGCTGAGCCAGACACAGACTGTATGCCTCCTGTTAGTGACACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR TCA 90 bp | AGCGCCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTaGTGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATATACT | + |
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Preference number: 1 (lower is better) Translates to: SALQIPQKGRRPWYQ*CQSSALDSFLLRYT Trigger: AGTATATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGGCGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
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| 3UTR CCA 90 bp | TCTTTGACAACCTCTAAGTCCATGACCTCTCTGCTCTCCTCAGGCTaGAAAGAGACTTTCCAATCCAGCCTTCTGGTGGATAGATGGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLTTSKSMTSLLSSG*KETFQSSLLVDRWE Trigger: TTCCCATCTATCCACCAGAAGGCTGGATTGGAAAGTCTCTTTCCAGCCTGAGGAGAGCAGAGAGGTCATGGACTTAGAGGTTGTCAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106523.8 |
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| 3UTR CCA 90 bp | AGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTaGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACA | + |
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Preference number: 1 (lower is better) Translates to: RKVGVPGTSDVSPVL*TVFSSDILCERFQT Trigger: TGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
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| 3UTR CCA 90 bp | ACTTTCTTCTTGCACATCCTTTCTCTAGGCTGCCACCAGAGGGTGTaGCCCAAATTTCAGGTGGATCCTCCCACTTTAAAAGATCCATAT | + |
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Preference number: 1 (lower is better) Translates to: TFFLHILSLGCHQRV*PKFQVDPPTLKDPY Trigger: ATATGGATCTTTTAAAGTGGGAGGATCCACCTGAAATTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGATGTGCAAGAAGAAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
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| 3UTR TCA 90 bp | CTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTaGTCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTCTTA | + |
|
Preference number: 1 (lower is better) Translates to: LGPWILMLQVAASST*SVPKFLAKILGFFL Trigger: TAAGAAGAATCCCAAGATTTTGGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR GCA 90 bp | GCTCTGAGATCAATCCAAGAGTTTAAGAACACAGGTTTTAACAGCTaGTTTCTTCTACACTCATACTCTAGGCAAACGCCCAAGTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: ALRSIQEFKNTGFNS*FLLHSYSRQTPKSQ Trigger: CTGGGACTTGGGCGTTTGCCTAGAGTATGAGTGTAGAAGAAAGCAGCTGTTAAAACCTGTGTTCTTAAACTCTTGGATTGATCTCAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR CCA 90 bp | TTGGTATTTCCCAACTGGGCAACAATAGAAGGCTTTCCCGTGGTTTaGCCCATTATTAGAAACAATAAGCCGCTTAGATCTTCTGCCACA | + |
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Preference number: 1 (lower is better) Translates to: LVFPNWATIEGFPVV*PIIRNNKPLRSSAT Trigger: TGTGGCAGAAGATCTAAGCGGCTTATTGTTTCTAATAATGGGCCAAACCACGGGAAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR TCA 90 bp | TTGGAGTTAAGTGTTGAGGACTTTGAGCTGTCATTCAGTGCAAGCTaGTCACTTTTACTTGGCTTTTGCATAGTGAGAGGTGGATTCAAG | + |
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Preference number: 1 (lower is better) Translates to: LELSVEDFELSFSAS*SLLLGFCIVRGGFK Trigger: CTTGAATCCACCTCTCACTATGCAAAAGCCAAGTAAAAGTGATCAGCTTGCACTGAATGACAGCTCAAAGTCCTCAACACTTAACTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR TCA 90 bp | AGGAGAGGATCTTTCCTCAGAACTGAAGGATATGCTGCACTGGCATaGACACTGGTGAAAGGAAATGGTTTGCATTTGGGTAACTTAAAA | + |
|
Preference number: 1 (lower is better) Translates to: RRGSFLRTEGYAALA*TLVKGNGLHLGNLK Trigger: TTTTAAGTTACCCAAATGCAAACCATTTCCTTTCACCAGTGTTCATGCCAGTGCAGCATATCCTTCAGTTCTGAGGAAAGATCCTCTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR GCA 90 bp | GGACTCCTTCATCGACTTGAACCTGTTTTATCCCTGTCAGTTCTGTaGAAAATTCAGAAAGAATTGGATGTTCTTGAGGCTGAACGTAAG | + |
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Preference number: 1 (lower is better) Translates to: GLLHRLEPVLSLSVL*KIQKELDVLEAERK Trigger: CTTACGTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTTTGCACAGAACTGACAGGGATAAAACAGGTTCAAGTCGATGAAGGAGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR CCA 90 bp | GCTATAAACACAGTGTCTACAAGTCTGCAGGAACCACAGATTATGTaGGCAGACTGCTTTGAAACTGGATTGAAAGTATTTTGTAGTTAT | + |
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Preference number: 1 (lower is better) Translates to: AINTVSTSLQEPQIM*ADCFETGLKVFCSY Trigger: ATAACTACAAAATACTTTCAATCCAGTTTCAAAGCAGTCTGCCCACATAATCTGTGGTTCCTGCAGACTTGTAGACACTGTGTTTATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
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| 3UTR GCA 90 bp | CTTGGTAGTGAAAAGAGGAAAGCTATGTCTGATATTGTAAAGATCTaGTTTCATGTTGCTTTTTGGTTGCAATTGGCCCTTTATACAGGA | + |
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Preference number: 1 (lower is better) Translates to: LGSEKRKAMSDIVKI*FHVAFWLQLALYTG Trigger: TCCTGTATAAAGGGCCAATTGCAACCAAAAAGCAACATGAAAGCAGATCTTTACAATATCAGACATAGCTTTCCTCTTTTCACTACCAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR GCA 90 bp | GATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATATACTATaGGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAA | + |
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Preference number: 1 (lower is better) Translates to: DVSPVLWTVFSSDIL*ERFQTELMTIVNQK Trigger: TTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
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| 3UTR CCA 90 bp | AACCTGTTTTATCCCTGTCAGTTCTGTGCAAAATTCAGAAAGAATTaGATGTTCTTGAGGCTGAACGTAAGCATGAAACTCAGATTCAAT | + |
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Preference number: 1 (lower is better) Translates to: NLFYPCQFCAKFRKN*MFLRLNVSMKLRFN Trigger: ATTGAATCTGAGTTTCATGCTTACGTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTTTGCACAGAACTGACAGGGATAAAACAGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR CAA 90 bp | GCAGAGAGAGTAACAGCAGGCAGGCAAAGAAGAAGCACTTTCTTCTaGCACATCCTTTCTCTAGGCTGCCACCAGAGGGTGTGGCCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AERVTAGRQRRSTFF*HILSLGCHQRVWPK Trigger: TTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGATGTGCAAGAAGAAAGTGCTTCTTCTTTGCCTGCCTGCTGTTACTCTCTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
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| 3UTR-3UTR TCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATGTGTCTGGCTCAGCCTaGGATGCTGGCAGTAAAACT | + |
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Preference number: 2 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDVSGSA*DAGSKT Trigger: AGTTTTACTGCCAGCATCTCAGGCTGAGCCAGACAC...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTCAGCCTGAGATGCTGGCAGTAAAACTACATCTTCCCACTCAGCCAACACTGATCGTCTGCTGCTaGTGCAGCTTATGGATCCAT | + |
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Preference number: 2 (lower is better) Translates to: LAQPEMLAVKLHLPTQPTLIVCC*CSLWIH Trigger: ATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAG...TGTTGGCTGAGTGGGAAGATGTAGTTTTACTGCCAGCATCTCAGGCTGAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR-3UTR TCA 90 bp | ATCTTCTGCCACACTTGCATAGAGGCGGTGTCATCTTTCCAGTCTTCCAAGGCTAGAAGTAGAAGGCTCTaGATCCCCAGCAGCAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: IFCHTCIEAVSSFQSSKARSRRL*IPSSKA Trigger: AGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCT...AGCCTTGGAAGACTGGAAAGATGACACCGCCTCTATGCAAGTGTGGCAGAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGCTTTGGAGCTCCTTTTaGTATATGCTGGGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EFETELLSNRHDLKEVNKLWSSF*YMLGPW Trigger: CCAGGGCCCCAGCATATATCAAAAGGAGCTCCAAAG...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTCTTTGGAGCTCCTTTTaGTATATGCTGGGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTLWSSF*YMLGPW Trigger: CCAGGGCCCCAGCATATATCAAAAGGAGCTCCAAAG...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR GCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATGCTCCTTTTGATATATaGTGGGGCCCTGGATACTCA | + |
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Preference number: 2 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDAPFDI*WGPGYS Trigger: TGAGTATCCAGGGCCCCAGCATATATCAAAAGGAGC...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR TCA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGAGCCCTTCTGAGGAATaGGACAGAGCTTTGCCATTG | + |
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Preference number: 2 (lower is better) Translates to: EFETELLSNRHDLKEVNKSPSEE*DRALPL Trigger: CAATGGCAAAGCTCTGTCTCATTCCTCAGAAGGGCT...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR GCA 90 bp | ATCTTCTGCCACACTTGCATAGAGGCGGTGTCATCTTTCCAGTCTTCCAAGGCTATCGTCTGCTGCTGCTaGAGCTTATGGATCCATTTA | + |
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Preference number: 2 (lower is better) Translates to: IFCHTCIEAVSSFQSSKAIVCCC*SLWIHL Trigger: TAAATGGATCCATAAGCTGCAGCAGCAGCAGACGAT...AGCCTTGGAAGACTGGAAAGATGACACCGCCTCTATGCAAGTGTGGCAGAAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR-3UTR GCA 90 bp | CCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCACAGTGTCTACAAGTCTaGAGGAACCACAGATTATGT | + |
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Preference number: 2 (lower is better) Translates to: PYKYPRKVGVPGTSDVSPQCLQV*RNHRLC Trigger: ACATAATCTGTGGTTCCTGCAGACTTGTAGACACTG...TGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
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| 3UTR-3UTR CCA 90 bp | ACAATAAGCCGCTTAGATCTTCTGCCACACTTGCATAGAGGCGGTGTCATCTTTGAGGTGGATTCAAGGTaGGAGAATGCAGTTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: TISRLDLLPHLHRGGVIFEVDSR*ENAVGP Trigger: TGGACCAACTGCATTCTCCCACCTTGAATCCACCTC...AAAGATGACACCGCCTCTATGCAAGTGTGGCAGAAGATCTAAGCGGCTTATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGGAGGTGGATTCAAGGTaGGAGAATGCAGTTGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: EFETELLSNRHDLKEVNKEVDSR*ENAVGP Trigger: TGGACCAACTGCATTCTCCCACCTTGAATCCACCTC...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCAGGCTTTCCCGTGGTTTaGCCCATTATTAGAAACAAT | + |
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Preference number: 2 (lower is better) Translates to: PYKYPRKVGVPGTSDVSPGFPVV*PIIRNN Trigger: ATTGTTTCTAATAATGGGCCAAACCACGGGAAAGCC...TGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAATACGGCTTGTTTCTaGAGAGCTGAAAGTGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGNTACF*RAESEP Trigger: GGGCTCACTTTCAGCTCTCCAGAAACAAGCCGTATT...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR CAA 90 bp | CATCTGGGCATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTaGATATATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HLGIFLCIYCTLELL*IYAGALDTHVASSC Trigger: GCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR TCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACCCCCAGCAGCAAAGCTaGTCGTCTGCTGCTGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: QNLTLSFHLEFETELLSNPQQQS*SSAAAA Trigger: TGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGG...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR-3UTR GCA 90 bp | TCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTAAGCTGATCGTCTGCTaGTGCTGCAGCTTATGGATC | + |
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Preference number: 2 (lower is better) Translates to: SSCPYYQQVEFIEELPKTKLIVC*CCSLWI Trigger: GATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTT...AGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR-3UTR GCA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGGCTCCTTTTGATATATaGTGGGGCCCTGGATACTCA | + |
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Preference number: 2 (lower is better) Translates to: PYYQQVEFIEELPKTVSGAPFDI*WGPGYS Trigger: TGAGTATCCAGGGCCCCAGCATATATCAAAAGGAGC...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCACTGTACCCAAATTTCTaGCCAAAATCTTGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: PYKYPRKVGVPGTSDVSPLYPNF*PKSWDS Trigger: AGAATCCCAAGATTTTGGCCAGAAATTTGGGTACAG...TGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCACTGATCACTTTTACTTaGCTTTTGCATAGTGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PYKYPRKVGVPGTSDVSPLITFT*LLHSER Trigger: CCTCTCACTATGCAAAAGCCAAGTAAAAGTGATCAG...TGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR CAA 90 bp | GCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTaGATCTGTACCCAAATTTCTGGCCAAAATCTTGGGATTCTTCTT | + |
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Preference number: 2 (lower is better) Translates to: AGALDTHVASSCFFN*ICTQISGQNLGILL Trigger: AAGAAGAATCCCAAGATTTTGGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTCAGCCTGAGATGCTGGCAGTAAAACTACATCTTCCCACTCAGCCAACATTCAATCTCTCCAGTTaGTGTATTCAACAAAACTGC | + |
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Preference number: 2 (lower is better) Translates to: LAQPEMLAVKLHLPTQPTFNLSS*CIQQNC Trigger: GCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAA...TGTTGGCTGAGTGGGAAGATGTAGTTTTACTGCCAGCATCTCAGGCTGAGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTCAGTGTCTACAAGTCTaGAGGAACCACAGATTATGT | + |
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Preference number: 2 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGQCLQV*RNHRLC Trigger: ACATAATCTGTGGTTCCTGCAGACTTGTAGACACTG...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCTGCCACACTTGCATAGAGGCGGTGTCATCTTTCCAGTCTTCCAAGGCTCTGTACCCAAATTTCTaGCCAAAATCTTGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: IFCHTCIEAVSSFQSSKALYPNF*PKSWDS Trigger: AGAATCCCAAGATTTTGGCCAGAAATTTGGGTACAG...AGCCTTGGAAGACTGGAAAGATGACACCGCCTCTATGCAAGTGTGGCAGAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTGCCTGTAAGTTGCTCTaGGATCAATCCAAGAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTACKLL*DQSKSL Trigger: TAAACTCTTGGATTGATCTCAGAGCAACTTACAGGC...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR TCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGCAAGAGTGCACGCCATaGAAGACATGTCCCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: WTVFSSDILCERFQTELMQECTP*KTCPFC Trigger: ACAGAAGGGACATGTCTTTCATGGCGTGCACTCTTG...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR-3UTR GCA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGCTGGGCATTTTCCTCTaGATTTACTGTACTTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: PYYQQVEFIEELPKTVSGLGIFL*IYCTLE Trigger: CTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAG...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGGTGTCTGGCTCAGCCTaGGATGCTGGCAGTAAAACT | + |
|
Preference number: 2 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKVSGSA*DAGSKT Trigger: AGTTTTACTGCCAGCATCTCAGGCTGAGCCAGACAC...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTAGGCTTTTCTTCATaGATAGTGAAGGTCTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SSCPYYQQVEFIEELPKTVGFSS*IVKVCL Trigger: AAGGCAGACCTTCACTATTCATGAAGAAAAGCCTAC...AGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTTCAGGGCTACTGTGGTaGTTCCCATCATTCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FSSDILCERFQTELMTIVSGLLW*FPSFQQ Trigger: CTGCTGGAATGATGGGAAGCACCACAGTAGCCCTGA...AACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTATTCAAGGTGGGAGAATaGAGTTGGTCCACAGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: LWTVFSSDILCERFQTELFKVGE*SWSTDV Trigger: GACATCTGTGGACCAACTGCATTCTCCCACCTTGAA...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTTCATGTTGCTTTTTGGTTGCAATTGGCCCTTTATACAGGAGGAATTCACATTTCAGGGCTACTGTaGTGCTTCCCATCATTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: CFHVAFWLQLALYTGGIHISGLL*CFPSFQ Trigger: CTGGAATGATGGGAAGCACCACAGTAGCCCTGAAAT...GTGAATTCCTCCTGTATAAAGGGCCAATTGCAACCAAAAAGCAACATGAAAGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTCTTTTTGGTTGCAATTaGCCCTTTATACAGGAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTLFGCN*PFIQEE Trigger: TTCCTCCTGTATAAAGGGCCAATTGCAACCAAAAAG...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTTGCATAGTGAGAGGTaGATTCAAGGTGGGAGAATG | + |
|
Preference number: 2 (lower is better) Translates to: CFGQFSPQIYYARGFKQSLHSER*IQGGRM Trigger: CATTCTCCCACCTTGAATCCACCTCTCACTATGCAA...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGCTGATCACTTTTACTTaGCTTTTGCATAGTGAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: EFETELLSNRHDLKEVNKLITFT*LLHSER Trigger: CCTCTCACTATGCAAAAGCCAAGTAAAAGTGATCAG...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATGTAGGCTTTTCTTCATaGATAGTGAAGGTCTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYVGFSS*IVKVCL Trigger: AAGGCAGACCTTCACTATTCATGAAGAAAAGCCTAC...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTCAAGAGTGCACGCCATaGAAGACATGTCCCTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FSSDILCERFQTELMTIVQECTP*KTCPFC Trigger: ACAGAAGGGACATGTCTTTCATGGCGTGCACTCTTG...AACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR-3UTR GCA 90 bp | ACCTGGGTGTTTGGCTCCTTTTACATCATAGACTGTACTGTGAGGACTCTTATACTGGGCATTTTCCTCTaGATTTACTGTACTTTGGAG | + |
|
Preference number: 2 (lower is better) Translates to: TWVFGSFYIIDCTVRTLILGIFL*IYCTLE Trigger: CTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAG...TATAAGAGTCCTCACAGTACAGTCTATGATGTAAAAGGAGCCAAACACCCAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR GCA 90 bp | TTTTCTGTCTTGTTGGTATTTCCCAACTGGGCAACAATAGAAGGCTTTCCCGTGCTTTTACTTGGCTTTTaGATAGTGAGAGGTGGATTC | + |
|
Preference number: 2 (lower is better) Translates to: FSVLLVFPNWATIEGFPVLLLGF*IVRGGF Trigger: GAATCCACCTCTCACTATGCAAAAGCCAAGTAAAAG...CACGGGAAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAACAAGACAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAAATTCAGAAAGAATTaGATGTTCTTGAGGCTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGKFRKN*MFLRLN Trigger: GTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTT...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR CCA 90 bp | TTTGGCCCATTATTAGAAACAATAAGCCGCTTAGATCTTCTGCCACACTTGCATTATATGCTGGGGCCCTaGATACTCATGTTGCAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: FGPLLETISRLDLLPHLHYMLGP*ILMLQV Trigger: TACTTGCAACATGAGTATCCAGGGCCCCAGCATATA...ATGCAAGTGTGGCAGAAGATCTAAGCGGCTTATTGTTTCTAATAATGGGCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTCAGACTGAATTCATCTaGGCATTTTCCTCTGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: SSCPYYQQVEFIEELPKTQTEFI*AFSSAF Trigger: AAATGCAGAGGAAAATGCCCAGATGAATTCAGTCTG...AGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTTAAGCAACCATCCCTaGTCATTTTCCAAGCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYLSNHP*SFSKQE Trigger: TTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAA...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTGCTTCTTCAACTTaGTCTGTACCCAAATTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: SALDSFLLRYTMREVSNRAASST*SVPKFL Trigger: CAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGC...TCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCCAGACTGAATTCATCTaGGCATTTTCCTCTGCATTT | + |
|
Preference number: 2 (lower is better) Translates to: CFGQFSPQIYYARGFKQSQTEFI*AFSSAF Trigger: AAATGCAGAGGAAAATGCCCAGATGAATTCAGTCTG...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTTTTCATGTTGCTTTTTaGTTGCAATTGGCCCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTFHVAF*LQLALY Trigger: ATAAAGGGCCAATTGCAACCAAAAAGCAACATGAAA...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTTGGTATTTCCCAACTaGGCAACAATAGAAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYLVFPN*ATIEGF Trigger: AAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAA...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CAA 90 bp | TATCCCTGTCAGTTCTGTGCAAAATTCAGAAAGAATTGGATGTTCTaGAGGCTGAACGTAAGCATGAAACTCAGATTCAATCTCTCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: YPCQFCAKFRKNWMF*RLNVSMKLRFNLSS Trigger: ACTGGAGAGATTGAATCTGAGTTTCATGCTTACGTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTTTGCACAGAACTGACAGGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR CAA 90 bp | AAGTGTTTGTTCCCATTTAAAATAACCACAGCATTTTCTGTCTTGTaGGTATTTCCCAACTGGGCAACAATAGAAGGCTTTCCCGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: KCLFPFKITTAFSVL*VFPNWATIEGFPVV Trigger: AACCACGGGAAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAACAAGACAGAAAATGCTGTGGTTATTTTAAATGGGAACAAACACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CAA 90 bp | TTGAAGTGTTTGTTCCCATTTAAAATAACCACAGCATTTTCTGTCTaGTTGGTATTTCCCAACTGGGCAACAATAGAAGGCTTTCCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: LKCLFPFKITTAFSV*LVFPNWATIEGFPV Trigger: CACGGGAAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAACAAGACAGAAAATGCTGTGGTTATTTTAAATGGGAACAAACACTTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAAACTCCTTCATCGACTTaGACCTGTTTTATCCCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: CYLSCIKSDKTYTEGSLETPSST*TCFIPV Trigger: GACAGGGATAAAACAGGTTCAAGTCGATGAAGGAGT...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR GCA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTCCCTGTCAGTTCTGTaGAAAATTCAGAAAGAATTG | + |
|
Preference number: 2 (lower is better) Translates to: CFGQFSPQIYYARGFKQSSLSVL*KIQKEL Trigger: CAATTCTTTCTGAATTTTGCACAGAACTGACAGGGA...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR CCA 90 bp | TTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTCCGAACCTGGGTGTTTaGCTCCTTTTACATCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: FSSDILCERFQTELMTIVPNLGV*LLLHHR Trigger: TCTATGATGTAAAAGGAGCCAAACACCCAGGTTCGG...AACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGTTGGTATTTCCCAACTaGGCAACAATAGAAGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: WTVFSSDILCERFQTELMLVFPN*ATIEGF Trigger: AAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAA...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CAA 90 bp | GAACCTGTTTTATCCCTGTCAGTTCTGTGCAAAATTCAGAAAGAATaGGATGTTCTTGAGGCTGAACGTAAGCATGAAACTCAGATTCAA | + |
|
Preference number: 2 (lower is better) Translates to: EPVLSLSVLCKIQKE*DVLEAERKHETQIQ Trigger: TTGAATCTGAGTTTCATGCTTACGTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTTTGCACAGAACTGACAGGGATAAAACAGGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR GCA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAACAGGTTTTAACAGCTaGTTTCTTCTACACTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: LWTVFSSDILCERFQTELTGFNS*FLLHSY Trigger: GTATGAGTGTAGAAGAAAGCAGCTGTTAAAACCTGT...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR CCA 90 bp | GTTTGGCCCATTATTAGAAACAATAAGCCGCTTAGATCTTCTGCCACACTTGCATTTCATGTTGCTTTTTaGTTGCAATTGGCCCTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: VWPIIRNNKPLRSSATLAFHVAF*LQLALY Trigger: ATAAAGGGCCAATTGCAACCAAAAAGCAACATGAAA...TGCAAGTGTGGCAGAAGATCTAAGCGGCTTATTGTTTCTAATAATGGGCCAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAAAAGCCTGTAAGTTaGTCTGAGATCAATCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKKKPVS*SEINPR Trigger: TCTTGGATTGATCTCAGAGCAACTTACAGGCTTTTT...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 38% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR GCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGAATGCTCCTGTAATCTaGCAACATAAAATGAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: WTVFSSDILCERFQTELMNAPVI*QHKMNV Trigger: GACATTCATTTTATGTTGGCAGATTACAGGAGCATT...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGATTATTGAATCCTTCTaGATTCATGTCAATGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WTVFSSDILCERFQTELMIIESF*IHVNAP Trigger: AGGAGCATTGACATGAATGCAGAAGGATTCAATAAT...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR-3UTR TCA 90 bp | CTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAACTCCGAAGAAACATGATTAACTaGCGGAATGGTTGTAGATAC | + |
|
Preference number: 2 (lower is better) Translates to: LCERFQTELMTIVNQKLRRNMIN*RNGCRY Trigger: GTATCTACAACCATTCCGTCAGTTAATCATGTTTCT...TCGGAGTTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR GCA 72 bp | GGCTCTGAATCCCCAGCAGCAAAGCTGATCGTCTGCTaGTGCTGCAGCTTATGGATCCATTTACAGAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GSESPAAKLIVC*CCSLWIHLQNW Trigger: CCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR TCA 72 bp | CAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTaGTGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QIPQKGRRPWYQ*CQSSALDSFLL Trigger: GAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR GCA 72 bp | GAATCCCCAGCAGCAAAGCTGATCGTCTGCTGCTGCTaGAGCTTATGGATCCATTTACAGAACTGGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: ESPAAKLIVCCC*SLWIHLQNWDK Trigger: CTTGTCCCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR GCA 72 bp | TCTGAATCCCCAGCAGCAAAGCTGATCGTCTGCTGCTaGTGCAGCTTATGGATCCATTTACAGAACTGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SESPAAKLIVCC*CSLWIHLQNWD Trigger: GTCCCAGTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR GCA 72 bp | GAAGGCTCTGAATCCCCAGCAGCAAAGCTGATCGTCTaGTGCTGCTGCAGCTTATGGATCCATTTACAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EGSESPAAKLIV*CCCSLWIHLQN Trigger: GTTCTGTAAATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR TCA 72 bp | CTAACAGGAGGCATACAGTCTGTGTCTGGCTCAGCCTaGGATGCTGGCAGTAAAACTACATCTTCCCACTCA | + |
|
Preference number: 3 (lower is better) Translates to: LTGGIQSVSGSA*DAGSKTTSSHS Trigger: TGAGTGGGAAGATGTAGTTTTACTGCCAGCATCTCAGGCTGAGCCAGACACAGACTGTATGCCTCCTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CCA 72 bp | AGTAACCGGCATGACCTGAAGGAAGTGAACAAGTGCTaGACTAACCTCTTCCTGCCCTTACTACCAACAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SNRHDLKEVNKC*TNLFLPLLPTG Trigger: ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTTCAGGTCATGCCGGTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR CCA 72 bp | TTGCACATCCTTTCTCTAGGCTGCCACCAGAGGGTGTaGCCCAAATTTCAGGTGGATCCTCCCACTTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LHILSLGCHQRV*PKFQVDPPTLK Trigger: TTTTAAAGTGGGAGGATCCACCTGAAATTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGATGTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| 3UTR-3UTR CAA 90 bp | TTTTCTGTCTTGTTGGTATTTCCCAACTGGGCAACAATAGAAGGCTTTCCCGTGGGTGGGAGAATGCAGTaGGTCCACAGATGTCGACGA | + |
|
Preference number: 3 (lower is better) Translates to: FSVLLVFPNWATIEGFPVGGRMQ*VHRCRR Trigger: TCGTCGACATCTGTGGACCAACTGCATTCTCCCACC...CACGGGAAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAACAAGACAGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGGTGGGAGAATGCAGTaGGTCCACAGATGTCGACGA | + |
|
Preference number: 3 (lower is better) Translates to: SSCPYYQQVEFIEELPKTGGRMQ*VHRCRR Trigger: TCGTCGACATCTGTGGACCAACTGCATTCTCCCACC...AGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR TCA 72 bp | AAAAGCACACAGTTTCACTTCAGAAGTAGAAGGCTCTaGATCCCCAGCAGCAAAGCTGATCGTCTGCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KSTQFHFRSRRL*IPSSKADRLLL Trigger: CAGCAGCAGACGATCAGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCTGAAGTGAAACTGTGTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR GCA 72 bp | TTTTGCATAGTGAGAGGTGGATTCAAGGTGGGAGAATaGAGTTGGTCCACAGATGTCGACGACTTGGTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: FCIVRGGFKVGE*SWSTDVDDLVV Trigger: CACTACCAAGTCGTCGACATCTGTGGACCAACTGCATTCTCCCACCTTGAATCCACCTCTCACTATGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR GCA 72 bp | TTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGTaGTGGACTAACCTCTTCCTGCCCTTACTACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: LSNRHDLKEVNK*WTNLFLPLLPT Trigger: TGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR TCA 72 bp | CTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTaGAGAGCTGCCGAAGACTGTCAGTGGGAAGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LFLPLLPTGRIY*RAAEDCQWEGQ Trigger: TTGACCTTCCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR GCA 72 bp | TATGCTGGGGCCCTGGATACTCATGTTGCAAGTAGCTaGTTCTTCAACTTGATCTGTACCCAAATTTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: YAGALDTHVASS*FFNLICTQISG Trigger: GCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAGGGCCCCAGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CCA 72 bp | ATAGTGAGAGGTGGATTCAAGGTGGGAGAATGCAGTTaGTCCACAGATGTCGACGACTTGGTAGTGAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: IVRGGFKVGECS*STDVDDLVVKR Trigger: TCTTTTCACTACCAAGTCGTCGACATCTGTGGACCAACTGCATTCTCCCACCTTGAATCCACCTCTCACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATAGATCTGCTTTCATGTaGCTTTTTGGTTGCAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDRSAFM*LFGCNW Trigger: CCAATTGCAACCAAAAAGCAACATGAAAGCAGATCT...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTCATGTTGCTTTTTGGTaGCAATTGGCCCTTTATACA | + |
|
Preference number: 3 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGHVAFW*QLALYT Trigger: TGTATAAAGGGCCAATTGCAACCAAAAAGCAACATG...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR TCA 72 bp | TCTTTCCTCAGAACTGAAGGATATGCTGCACTGGCATaGACACTGGTGAAAGGAAATGGTTTGCATTTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFLRTEGYAALA*TLVKGNGLHLG Trigger: ACCCAAATGCAAACCATTTCCTTTCACCAGTGTTCATGCCAGTGCAGCATATCCTTCAGTTCTGAGGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGCTTTCATGTTGCTTTTaGGTTGCAATTGGCCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PYYQQVEFIEELPKTVSGLSCCF*VAIGPL Trigger: TAAAGGGCCAATTGCAACCAAAAAGCAACATGAAAG...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR TCA 72 bp | AGTGTTGAGGACTTTGAGCTGTCATTCAGTGCAAGCTaGTCACTTTTACTTGGCTTTTGCATAGTGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: SVEDFELSFSAS*SLLLGFCIVRG Trigger: ACCTCTCACTATGCAAAAGCCAAGTAAAAGTGATCAGCTTGCACTGAATGACAGCTCAAAGTCCTCAACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR TCA 72 bp | TGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTTaGTCTGTACCCAAATTTCTGGCCAAAATCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: WILMLQVAASST*SVPKFLAKILG Trigger: TCCCAAGATTTTGGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR TCA 72 bp | CAATTGGCCCTTTATACAGGAGGAATTCACACAGACTaGATTCATCTGGGCATTTTCCTCTGCATTTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: QLALYTGGIHTD*IHLGIFLCIYC Trigger: ACAGTAAATGCAGAGGAAAATGCCCAGATGAATTCAGTCTGTGTGAATTCCTCCTGTATAAAGGGCCAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR GCA 72 bp | TCAATCCAAGAGTTTAAGAACACAGGTTTTAACAGCTaGTTTCTTCTACACTCATACTCTAGGCAAACGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SIQEFKNTGFNS*FLLHSYSRQTP Trigger: GGGCGTTTGCCTAGAGTATGAGTGTAGAAGAAAGCAGCTGTTAAAACCTGTGTTCTTAAACTCTTGGATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR CCA 72 bp | ACAGTGTCTACAAGTCTGCAGGAACCACAGATTATGTaGGCAGACTGCTTTGAAACTGGATTGAAAGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TVSTSLQEPQIM*ADCFETGLKVF Trigger: AAATACTTTCAATCCAGTTTCAAAGCAGTCTGCCCACATAATCTGTGGTTCCTGCAGACTTGTAGACACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTAAGCCAGAATGTTCTCGTCCTGAAAATTCTATTCCCACTTCCTGCAAGGCAATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: SKPECSRPENSIPTSCKAIQSLQ*LYSTKL Trigger: CAGTTTTGTTGAATACAGCAACTGGAGAGATTGAAT...TGCCTTGCAGGAAGTGGGAATAGAATTTTCAGGACGAGAACATTCTGGCTTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR CAA 90 bp | GTTTGGCCCATTATTAGAAACAATAAGCCGCTTAGATCTTCTGCCACACTTGCAAGATCTGCTTTCATGTaGCTTTTTGGTTGCAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: VWPIIRNNKPLRSSATLARSAFM*LFGCNW Trigger: CCAATTGCAACCAAAAAGCAACATGAAAGCAGATCT...TGCAAGTGTGGCAGAAGATCTAAGCGGCTTATTGTTTCTAATAATGGGCCAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAAGCTGCTTCTTCAACTaGATCTGTACCCAAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LWTVFSSDILCERFQTELSCFFN*ICTQIS Trigger: AGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCT...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAAGCTTTTTGGTTGCAATaGGCCCTTTATACAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CYLSCIKSDKTYTEGSLEAFWLQ*ALYTGG Trigger: TCCTCCTGTATAAAGGGCCAATTGCAACCAAAAAGC...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR GCA 72 bp | CCAGTGCTTTGGACAGTTTTCTCCTCAGATATACTATaGGAGAGGTTTCAAACAGAGCTAATGACAATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PVLWTVFSSDIL*ERFQTELMTIV Trigger: AACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR CCA 72 bp | TATCCCTGTCAGTTCTGTGCAAAATTCAGAAAGAATTaGATGTTCTTGAGGCTGAACGTAAGCATGAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: YPCQFCAKFRKN*MFLRLNVSMKL Trigger: GAGTTTCATGCTTACGTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTTTGCACAGAACTGACAGGGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR CCA 72 bp | TTTATACAGGAGGAATTCACACAGACTGAATTCATCTaGGCATTTTCCTCTGCATTTACTGTACTTTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: FIQEEFTQTEFI*AFSSAFTVLWS Trigger: GCTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAGATGAATTCAGTCTGTGTGAATTCCTCCTGTATAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGAAGAATTGGATGTTCTaGAGGCTGAACGTAAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKKNWMF*RLNVSM Trigger: CATGCTTACGTTCAGCCTCAAGAACATCCAATTCTT...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| 3UTR-3UTR CAA 90 bp | GACTGTACTGTGAGGACTCTTATACACAATAGACTTAGATGTCTCAGAGTTTTGCATGTTGCTTTTTGGTaGCAATTGGCCCTTTATACA | + |
|
Preference number: 3 (lower is better) Translates to: DCTVRTLIHNRLRCLRVLHVAFW*QLALYT Trigger: TGTATAAAGGGCCAATTGCAACCAAAAAGCAACATG...CAAAACTCTGAGACATCTAAGTCTATTGTGTATAAGAGTCCTCACAGTACAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAACTCCGATTTCTGGCCAAAATCTaGGGATTCTTCTTAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LCERFQTELMTIVNQKLRFLAKI*GFFLVR Trigger: TCTCACTAAGAAGAATCCCAAGATTTTGGCCAGAAA...TCGGAGTTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | CTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAACTCCGAAGCTGCTTCTTCAACTaGATCTGTACCCAAATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LCERFQTELMTIVNQKLRSCFFN*ICTQIS Trigger: AGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCT...TCGGAGTTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGCTTTCATGTTGCTTTTaGGTTGCAATTGGCCCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKLSCCF*VAIGPL Trigger: TAAAGGGCCAATTGCAACCAAAAAGCAACATGAAAG...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR GCA 72 bp | GAAAAGAGGAAAGCTATGTCTGATATTGTAAAGATCTaGTTTCATGTTGCTTTTTGGTTGCAATTGGCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: EKRKAMSDIVKI*FHVAFWLQLAL Trigger: AAGGGCCAATTGCAACCAAAAAGCAACATGAAAGCAGATCTTTACAATATCAGACATAGCTTTCCTCTTTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCAGGCAAAGAAGAAGCACTTTCTTCTTGCACATCCTTTCTCTAGGCTGCCCCAGCAGCAAAGCTaGTCGTCTGCTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRQAKKKHFLLAHPFSRLPQQQS*SSAAAA Trigger: TGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGG...CAGCCTAGAGAAAGGATGTGCAAGAAGAAAGTGCTTCTTCTTTGCCTGCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | GAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATGTCTCAGCAAGTCTTCATCAGGGCTACTGTGGTaGTTCCCATCATTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESSSGSVHEAAGCLSKSSSGLLW*FPSFQQ Trigger: CTGCTGGAATGATGGGAAGCACCACAGTAGCCCTGA...TGAAGACTTGCTGAGACATCCGGCGGCCTCATGGACTGAACCACTACTGGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTCTCTAGGCTGCCACCAGAGGGTGTGGCCCAAATTTCAGGTGGATCCTAAGCTGATCGTCTGCTaGTGCTGCAGCTTATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLGCHQRVWPKFQVDPKLIVC*CCSLWI Trigger: GATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTT...AGGATCCACCTGAAATTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | TGCAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATGCAAAGCTGATCGTCTaGTGCTGCTGCAGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: CNEKSKNPVVVQSMRPPDAKLIV*CCCSLW Trigger: CCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGC...ATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | TGCAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATCTGATCGTCTGCTGCTaGTGCAGCTTATGGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CNEKSKNPVVVQSMRPPDLIVCC*CSLWIH Trigger: ATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAG...ATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | CCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCACTGATCGTCTGCTGCTaGTGCAGCTTATGGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PYKYPRKVGVPGTSDVSPLIVCC*CSLWIH Trigger: ATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAG...TGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TGCAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATCAATCTGCTCCCTCCTaGATTTCCACTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CNEKSKNPVVVQSMRPPDQSAPS*ISTCWC Trigger: ACACCAGCAAGTGGAAATCCAGGAGGGAGCAGATTG...ATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTCTCTAGGCTGCCACCAGAGGGTGTGGCCCAAATTTCAGGTGGATCCTACTCCTTCATCGACTTaGACCTGTTTTATCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSLGCHQRVWPKFQVDPTPSST*TCFIPV Trigger: GACAGGGATAAAACAGGTTCAAGTCGATGAAGGAGT...AGGATCCACCTGAAATTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR TCA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCCCCCAGCAGCAAAGCTaGTCGTCTGCTGCTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CFGQFSPQIYYARGFKQSPQQQS*SSAAAA Trigger: TGCAGCAGCAGCAGACGATCAGCTTTGCTGCTGGGG...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | ATCTTCTGCCACACTTGCATAGAGGCGGTGTCATCTTTCCAGTCTTCCAAGGCTAAGCTGATCGTCTGCTaGTGCTGCAGCTTATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: IFCHTCIEAVSSFQSSKAKLIVC*CCSLWI Trigger: GATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTT...AGCCTTGGAAGACTGGAAAGATGACACCGCCTCTATGCAAGTGTGGCAGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CCA 90 bp | TGCAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATATTTCAGGGCTACTGTaGTGCTTCCCATCATTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: CNEKSKNPVVVQSMRPPDISGLL*CFPSFQ Trigger: CTGGAATGATGGGAAGCACCACAGTAGCCCTGAAAT...ATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGGTGTGGCCCAAATTTCAGGTGGATCCTCCCACTTTAAAAGATCCATAAGAAGTAGAAGGCTCTaGATCCCCAGCAGCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PEGVAQISGGSSHFKRSIRSRRL*IPSSKA Trigger: AGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCT...TATGGATCTTTTAAAGTGGGAGGATCCACCTGAAATTTGGGCCACACCCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR TCA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAAGTAGAAGGCTCTaGATCCCCAGCAGCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGRSRRL*IPSSKA Trigger: AGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCT...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATGTATCGTCTGCTGCTGCTaGAGCTTATGGATCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: QRKVQESSSGSVHEAAGCIVCCC*SLWIHL Trigger: TAAATGGATCCATAAGCTGCAGCAGCAGCAGACGAT...ACATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR CCA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGGAGGTGGATTCAAGGTaGGAGAATGCAGTTGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PYYQQVEFIEELPKTVSGEVDSR*ENAVGP Trigger: TGGACCAACTGCATTCTCCCACCTTGAATCCACCTC...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTTCTTGCACATCCTTTCTCTAGGCTGCCACCAGAGGGTGTGGCCCAAATTGCCTGTAAGTTGCTCTaGGATCAATCCAAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: FLLAHPFSRLPPEGVAQIACKLL*DQSKSL Trigger: TAAACTCTTGGATTGATCTCAGAGCAACTTACAGGC...AATTTGGGCCACACCCTCTGGTGGCAGCCTAGAGAAAGGATGTGCAAGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR TCA 90 bp | TGCAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATTTAAGCAACCATCCCTaGTCATTTTCCAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CNEKSKNPVVVQSMRPPDLSNHP*SFSKQE Trigger: TTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAA...ATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR TCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATGCTGCTTCTTCAACTTaGTCTGTACCCAAATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDAASST*SVPKFL Trigger: CAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGC...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATGTGTCTGGCTCAGCCTaGGATGCTGGCAGTAAAACT | + |
|
Preference number: 4 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYVSGSA*DAGSKT Trigger: AGTTTTACTGCCAGCATCTCAGGCTGAGCCAGACAC...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGGTGTGGCCCAAATTTCAGGTGGATCCTCCCACTTTAAAAGATCCATAACAACTGTTTCAATCTaGTCCCTCCTGGATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PEGVAQISGGSSHFKRSITTVSI*SLLDFH Trigger: GTGGAAATCCAGGAGGGAGCAGATTGAAACAGTTGT...TATGGATCTTTTAAAGTGGGAGGATCCACCTGAAATTTGGGCCACACCCTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTATCGTCTGCTGCTGCTaGAGCTTATGGATCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGIVCCC*SLWIHL Trigger: TAAATGGATCCATAAGCTGCAGCAGCAGCAGACGAT...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | GAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATGTCTCAGCAAGTCTTCAAAAAAGCCTGTAAGTTaGTCTGAGATCAATCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ESSSGSVHEAAGCLSKSSKKPVS*SEINPR Trigger: TCTTGGATTGATCTCAGAGCAACTTACAGGCTTTTT...TGAAGACTTGCTGAGACATCCGGCGGCCTCATGGACTGAACCACTACTGGATTC 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATCTGGGCATTTTCCTCTaGATTTACTGTACTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDLGIFL*IYCTLE Trigger: CTCCAAAGTACAGTAAATGCAGAGGAAAATGCCCAG...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTTTCAAGGTGGGAGAATaGAGTTGGTCCACAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTFKVGE*SWSTDV Trigger: GACATCTGTGGACCAACTGCATTCTCCCACCTTGAA...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGATCTTCTGCCACACTTaGATAGAGGCGGTGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EFETELLSNRHDLKEVNKIFCHT*IEAVSS Trigger: AGATGACACCGCCTCTATGCAAGTGTGGCAGAAGAT...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATGGCTTTCCCGTGGTTTaGCCCATTATTAGAAACAAT | + |
|
Preference number: 4 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDGFPVV*PIIRNN Trigger: ATTGTTTCTAATAATGGGCCAAACCACGGGAAAGCC...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CCTTACAAATACCCCAGAAAGGTAGGCGTCCCTGGTACCAGTGATGTCAGTCCATTCAATCTCTCCAGTTaGTGTATTCAACAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PYKYPRKVGVPGTSDVSPFNLSS*CIQQNC Trigger: GCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAA...TGGACTGACATCACTGGTACCAGGGACGCCTACCTTTCTGGGGTATTTGTAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGGCAAAGCTGATCGTCTaGTGCTGCTGCAGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: WTVFSSDILCERFQTELMAKLIV*CCCSLW Trigger: CCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGC...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATGTACAGGTTTTAACAGCTaGTTTCTTCTACACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: QRKVQESSSGSVHEAAGCTGFNS*FLLHSY Trigger: GTATGAGTGTAGAAGAAAGCAGCTGTTAAAACCTGT...ACATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR CCA 90 bp | GTTTGGCCCATTATTAGAAACAATAAGCCGCTTAGATCTTCTGCCACACTTGCACAATCTGCTCCCTCCTaGATTTCCACTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VWPIIRNNKPLRSSATLAQSAPS*ISTCWC Trigger: ACACCAGCAAGTGGAAATCCAGGAGGGAGCAGATTG...TGCAAGTGTGGCAGAAGATCTAAGCGGCTTATTGTTTCTAATAATGGGCCAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| CDS-3UTR CCA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCCAATCTGCTCCCTCCTaGATTTCCACTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CFGQFSPQIYYARGFKQSQSAPS*ISTCWC Trigger: ACACCAGCAAGTGGAAATCCAGGAGGGAGCAGATTG...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATCAATCTGCTCCCTCCTaGATTTCCACTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYQSAPS*ISTCWC Trigger: ACACCAGCAAGTGGAAATCCAGGAGGGAGCAGATTG...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATCAGACTGAATTCATCTaGGCATTTTCCTCTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDQTEFI*AFSSAF Trigger: AAATGCAGAGGAAAATGCCCAGATGAATTCAGTCTG...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | CTGGCCAAAATCTTGGGATTCTTCTTAGTGAGAACCTTGTTCAAGGACCTGGTAACTCCTTCATCGACTTaGACCTGTTTTATCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAKILGFFLVRTLFKDLVTPSST*TCFIPV Trigger: GACAGGGATAAAACAGGTTCAAGTCGATGAAGGAGT...TACCAGGTCCTTGAACAAGGTTCTCACTAAGAAGAATCCCAAGATTTTGGCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR TCA 90 bp | GACGGAATGGTTGTAGATACAAGCACTAAGTTGGAGTTAAGTGTTGAGGACTTTAGAAGTAGAAGGCTCTaGATCCCCAGCAGCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DGMVVDTSTKLELSVEDFRSRRL*IPSSKA Trigger: AGCTTTGCTGCTGGGGATTCAGAGCCTTCTACTTCT...AAAGTCCTCAACACTTAACTCCAACTTAGTGCTTGTATCTACAACCATTCCGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR TCA 90 bp | CACTGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTACTTTGGAGCTCCTTTTaGTATATGCTGGGGCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HCYLSCIKSDKTYTEGSLLWSSF*YMLGPW Trigger: CCAGGGCCCCAGCATATATCAAAAGGAGCTCCAAAG...TAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CACTGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGCAAAGCTGATCGTCTaGTGCTGCTGCAGCTTATGG | + |
|
Preference number: 4 (lower is better) Translates to: HCYLSCIKSDKTYTEGSLAKLIV*CCCSLW Trigger: CCATAAGCTGCAGCAGCAGCAGACGATCAGCTTTGC...TAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATACAGGTTTTAACAGCTaGTTTCTTCTACACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDTGFNS*FLLHSY Trigger: GTATGAGTGTAGAAGAAAGCAGCTGTTAAAACCTGT...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGGGTGTGGCCCAAATTTCAGGTGGATCCTCCCACTTTAAAAGATCCATAATCCATTTACAGAACTaGGACAAGCAAATCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PEGVAQISGGSSHFKRSIIHLQN*DKQIFR Trigger: CCTGAAGATTTGCTTGTCCCAGTTCTGTAAATGGAT...TATGGATCTTTTAAAGTGGGAGGATCCACCTGAAATTTGGGCCACACCCTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| 3UTR CAA 72 bp | GTCATTCAGTGCAAGCTGATCACTTTTACTTGGCTTTaGCATAGTGAGAGGTGGATTCAAGGTGGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: VIQCKLITFTWL*HSERWIQGGRM Trigger: CATTCTCCCACCTTGAATCCACCTCTCACTATGCAAAAGCCAAGTAAAAGTGATCAGCTTGCACTGAATGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CAA 72 bp | TTAGAAACAATAAGCCGCTTAGATCTTCTGCCACACTaGCATAGAGGCGGTGTCATCTTTCCAGTCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LETISRLDLLPH*HRGGVIFPVFQ Trigger: TTGGAAGACTGGAAAGATGACACCGCCTCTATGCAAGTGTGGCAGAAGATCTAAGCGGCTTATTGTTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| CDS-3UTR TCA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGTTCTTCTGGAACAAGTaGTCTCTCTGCAGAATTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PYYQQVEFIEELPKTVSGFFWNK*SLCRIK Trigger: CTTAATTCTGCAGAGAGATCACTTGTTCCAGAAGAA...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTATGCTGCACTGGCATaGACACTGGTGAAAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYYAALA*TLVKGN Trigger: ATTTCCTTTCACCAGTGTTCATGCCAGTGCAGCATA...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAGCCCTTCTGAGGAATaGGACAGAGCTTTGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKSPSEE*DRALPL Trigger: CAATGGCAAAGCTCTGTCTCATTCCTCAGAAGGGCT...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAGAAAGTGAGCCCTTCTaGGGAATGAGACAGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWTVFSSDILCERFQTELESEPF*GMRQSF Trigger: AAAGCTCTGTCTCATTCCTCAGAAGGGCTCACTTTC...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACTCAGGGCTACTGTGGTaGTTCCCATCATTCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QNLTLSFHLEFETELLSNSGLLW*FPSFQQ Trigger: CTGCTGGAATGATGGGAAGCACCACAGTAGCCCTGA...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CCAGAGGGTGTGGCCCAAATTTCAGGTGGATCCTCCCACTTTAAAAGATCCATATTCAATCTCTCCAGTTaGTGTATTCAACAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: PEGVAQISGGSSHFKRSIFNLSS*CIQQNC Trigger: GCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAA...TATGGATCTTTTAAAGTGGGAGGATCCACCTGAAATTTGGGCCACACCCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAACTGATCGTCTGCTGCTaGTGCAGCTTATGGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKLIVCC*CSLWIH Trigger: ATGGATCCATAAGCTGCAGCAGCAGCAGACGATCAG...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | AAGGAAGTGAACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAAAAAGCCTGTAAGTTaGTCTGAGATCAATCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEVNKCWTNLFLPLLPTGKKPVS*SEINPR Trigger: TCTTGGATTGATCTCAGAGCAACTTACAGGCTTTTT...ACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTTCACTTCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCCTGCCCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGAAATTCAATCAATCTaGTCCCTCCTGGATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSCPYYQQVEFIEELPKTEIQSI*SLLDFH Trigger: GTGGAAATCCAGGAGGGAGCAGATTGATTGAATTTC...AGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR GCA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGGATCTGCTTTCATGTTaGTTTTTGGTTGCAATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PYYQQVEFIEELPKTVSGDLLSC*FLVAIG Trigger: GCCAATTGCAACCAAAAAGCAACATGAAAGCAGATC...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TCTAATGCCAGAAGGGTTGGCAGAGAGAGTAACAGCAGGCAGGCAAAGAAGAAGAAATTCAGAAAGAATTaGATGTTCTTGAGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SNARRVGRESNSRQAKKKKFRKN*MFLRLN Trigger: GTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTT...CTTCTTCTTTGCCTGCCTGCTGTTACTCTCTCTGCCAACCCTTCTGGCATTAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR CCA 90 bp | GTCCCTGGTACCAGTGATGTCAGTCCAGTGCTTTGGACAGTTTTCTCCTCAGATAAATTCAGAAAGAATTaGATGTTCTTGAGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGTSDVSPVLWTVFSSDKFRKN*MFLRLN Trigger: GTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTT...ATCTGAGGAGAAAACTGTCCAAAGCACTGGACTGACATCACTGGTACCAGGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGATCCATTTACAGAACTaGGACAAGCAAATCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFETELLSNRHDLKEVNKIHLQN*DKQIFR Trigger: CCTGAAGATTTGCTTGTCCCAGTTCTGTAAATGGAT...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGCATACAGTCTGTGTCTaGCTCAGCCTGAGATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKHTVCV*LSLRCW Trigger: CCAGCATCTCAGGCTGAGCCAGACACAGACTGTATG...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTACAGAGCTTTGCCATTaGTCCTTTCTTTTTGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTTELCH*SFLFEV Trigger: CACTTCAAAAAGAAAGGACCAATGGCAAAGCTCTGT...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| 3UTR CAA 72 bp | CTGGATACTCATGTTGCAAGTAGCTGCTTCTTCAACTaGATCTGTACCCAAATTTCTGGCCAAAATCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LDTHVASSCFFN*ICTQISGQNLG Trigger: CCCAAGATTTTGGCCAGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCTACTTGCAACATGAGTATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CAA 72 bp | ATTTTCCTCTGCATTTACTGTACTTTGGAGCTCCTTTaGATATATGCTGGGGCCCTGGATACTCATGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLCIYCTLELL*IYAGALDTHVA Trigger: TGCAACATGAGTATCCAGGGCCCCAGCATATATCAAAAGGAGCTCCAAAGTACAGTAAATGCAGAGGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| 3UTR CAA 72 bp | ACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTaGAGTAACCGGCATGACCTGAAGGAAGTGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSFHLEFETEL*SNRHDLKEVNK Trigger: CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGACTCCTTCATCGACTTaGACCTGTTTTATCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WTVFSSDILCERFQTELMTPSST*TCFIPV Trigger: GACAGGGATAAAACAGGTTCAAGTCGATGAAGGAGT...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAACAACTGTTTCAATCTaGTCCCTCCTGGATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWTVFSSDILCERFQTELTTVSI*SLLDFH Trigger: GTGGAAATCCAGGAGGGAGCAGATTGAAACAGTTGT...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAACTCCGAAAGCTGATCGTCTGCTaGTGCTGCAGCTTATGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LCERFQTELMTIVNQKLRKLIVC*CCSLWI Trigger: GATCCATAAGCTGCAGCAGCAGCAGACGATCAGCTT...TCGGAGTTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CCTTACTACCAACAGGTAGAATTTATTGAAGAGCTGCCGAAGACTGTCAGTGGGAATGAGACAGAGCTTTaGCATTGGTCCTTTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PYYQQVEFIEELPKTVSGNETEL*HWSFLF Trigger: AAAAAGAAAGGACCAATGGCAAAGCTCTGTCTCATT...CCCACTGACAGTCTTCGGCAGCTCTTCAATAAATTCTACCTGTTGGTAGTAAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | AGTGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGACCCTGTAAGTTGCTCTaGGATCAATCCAAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: SALDSFLLRYTMREVSNRPCKLL*DQSKSL Trigger: TAAACTCTTGGATTGATCTCAGAGCAACTTACAGGG...TCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR TCA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTCATTCAGTGCAAGCTaGTCACTTTTACTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CFGQFSPQIYYARGFKQSSFSAS*SLLLGF Trigger: AAAGCCAAGTAAAAGTGATCAGCTTGCACTGAATGA...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAACTCCGAGGCATACAATCAATCTaGTCCCTCCTGGATTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LCERFQTELMTIVNQKLRGIQSI*SLLDFH Trigger: GTGGAAATCCAGGAGGGAGCAGATTGATTGTATGCC...TCGGAGTTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| CDS-3UTR GCA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTACTAAGCCCTGTAAGTTaGTCTGAGATCAATCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWTVFSSDILCERFQTELLSPVS*SEINPR Trigger: TCTTGGATTGATCTCAGAGCAACTTACAGGGCTTAG...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTACCGAACCTGGGTGTTTaGCTCCTTTTACATCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HCYLSCIKSDKTYTEGSLPNLGV*LLLHHR Trigger: TCTATGATGTAAAAGGAGCCAAACACCCAGGTTCGG...TAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACAATACGGCTTGTTTCTaGAGAGCTGAAAGTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: QNLTLSFHLEFETELLSNNTACF*RAESEP Trigger: GGGCTCACTTTCAGCTCTCCAGAAACAAGCCGTATT...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAGCCTGTAAGTTGCTCTaGGATCAATCCAAGAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKACKLL*DQSKSL Trigger: TAAACTCTTGGATTGATCTCAGAGCAACTTACAGGC...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAAATCGTCTGCTGCTGCTaGAGCTTATGGATCCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: CYLSCIKSDKTYTEGSLEIVCCC*SLWIHL Trigger: TAAATGGATCCATAAGCTGCAGCAGCAGCAGACGAT...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | TGGGTGTTTGGCTCCTTTTACATCATAGACTGTACTGTGAGGACTCTTATACACACAGGTTTTAACAGCTaGTTTCTTCTACACTCATAC | + |
|
Preference number: 4 (lower is better) Translates to: WVFGSFYIIDCTVRTLIHTGFNS*FLLHSY Trigger: GTATGAGTGTAGAAGAAAGCAGCTGTTAAAACCTGT...GTGTATAAGAGTCCTCACAGTACAGTCTATGATGTAAAAGGAGCCAAACACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CCA 90 bp | TGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGATCCATTTACAGAACTaGGACAAGCAAATCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WTVFSSDILCERFQTELMIHLQN*DKQIFR Trigger: CCTGAAGATTTGCTTGTCCCAGTTCTGTAAATGGAT...CATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAATATATGCTGGGGCCCTaGATACTCATGTTGCAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CYLSCIKSDKTYTEGSLEYMLGP*ILMLQV Trigger: TACTTGCAACATGAGTATCCAGGGCCCCAGCATATA...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTTTGCATAGTGAGAGGTaGATTCAAGGTGGGAGAATG | + |
|
Preference number: 4 (lower is better) Translates to: FSSDILCERFQTELMTIVLHSER*IQGGRM Trigger: CATTCTCCCACCTTGAATCCACCTCTCACTATGCAA...AACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | CTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTATTGGTATTTCCCAACTaGGCAACAATAGAAGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LWTVFSSDILCERFQTELLVFPN*ATIEGF Trigger: AAAGCCTTCTATTGTTGCCCAGTTGGGAAATACCAA...TAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| 3UTR CAA 72 bp | TTAACTGACGGAATGGTTGTAGATACAAGCACTAAGTaGGAGTTAAGTGTTGAGGACTTTGAGCTGTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTDGMVVDTSTK*ELSVEDFELSF Trigger: GAATGACAGCTCAAAGTCCTCAACACTTAACTCCAACTTAGTGCTTGTATCTACAACCATTCCGTCAGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000033224.14 ENSMUST00000139192.8 |
||
| CDS-3UTR TCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACTGGCATGAACACTGGTaGAAGGAAATGGTTTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: QNLTLSFHLEFETELLSNWHEHW*KEMVCI Trigger: AATGCAAACCATTTCCTTTCACCAGTGTTCATGCCA...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAATGGGGAGCAAATAGATaGTGTAGGCTTTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: CYLSCIKSDKTYTEGSLEWGANR*CRLFFM Trigger: CATGAAGAAAAGCCTACATCATCTATTTGCTCCCCA...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | GGACTTATAAGAATGGCTTACAGGTCTGACTTTGGTCTGACTAAGTCAACAATGTCCCTGTCAGTTCTGTaGAAAATTCAGAAAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: GLIRMAYRSDFGLTKSTMSLSVL*KIQKEL Trigger: CAATTCTTTCTGAATTTTGCACAGAACTGACAGGGA...CATTGTTGACTTAGTCAGACCAAAGTCAGACCTGTAAGCCATTCTTATAAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR GCA 90 bp | GACGGAATGGTTGTAGATACAAGCACTAAGTTGGAGTTAAGTGTTGAGGACTTTTCCCTGTCAGTTCTGTaGAAAATTCAGAAAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: DGMVVDTSTKLELSVEDFSLSVL*KIQKEL Trigger: CAATTCTTTCTGAATTTTGCACAGAACTGACAGGGA...AAAGTCCTCAACACTTAACTCCAACTTAGTGCTTGTATCTACAACCATTCCGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAACTTTTTGGTTGCAATTaGCCCTTTATACAGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKLFGCN*PFIQEE Trigger: TTCCTCCTGTATAAAGGGCCAATTGCAACCAAAAAG...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAACTGATCACTTTTACTTaGCTTTTGCATAGTGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKLITFT*LLHSER Trigger: CCTCTCACTATGCAAAAGCCAAGTAAAAGTGATCAG...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAATTAAGCAACCATCCCTaGTCATTTTCCAAGCAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CYLSCIKSDKTYTEGSLELSNHP*SFSKQE Trigger: TTCTTGCTTGGAAAATGATCAGGGATGGTTGCTTAA...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR TCA 90 bp | CACTGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAAGAAACATGATTAACTaGCGGAATGGTTGTAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: HCYLSCIKSDKTYTEGSLRNMIN*RNGCRY Trigger: GTATCTACAACCATTCCGTCAGTTAATCATGTTTCT...TAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | GCTTTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAATCCCTGTCAGTTCTGTaGAAAATTCAGAAAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: AFIVLNPDYKSHDQEQLKSLSVL*KIQKEL Trigger: CAATTCTTTCTGAATTTTGCACAGAACTGACAGGGA...TTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAAAGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACCTTTTACTTGGCTTTTaGATAGTGAGAGGTGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: QNLTLSFHLEFETELLSNLLLGF*IVRGGF Trigger: GAATCCACCTCTCACTATGCAAAAGCCAAGTAAAAG...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CCA 90 bp | TGCTTTCATGTTGCTTTTTGGTTGCAATTGGCCCTTTATACAGGAGGAATTCACAAATTCAGAAAGAATTaGATGTTCTTGAGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: CFHVAFWLQLALYTGGIHKFRKN*MFLRLN Trigger: GTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTT...GTGAATTCCTCCTGTATAAAGGGCCAATTGCAACCAAAAAGCAACATGAAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACCTGTACCCAAATTTCTaGCCAAAATCTTGGGATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QNLTLSFHLEFETELLSNLYPNF*PKSWDS Trigger: AGAATCCCAAGATTTTGGCCAGAAATTTGGGTACAG...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| 3UTR CAA 72 bp | CAGTTCTGTGCAAAATTCAGAAAGAATTGGATGTTCTaGAGGCTGAACGTAAGCATGAAACTCAGATTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QFCAKFRKNWMF*RLNVSMKLRFN Trigger: ATTGAATCTGAGTTTCATGCTTACGTTCAGCCTCAAGAACATCCAATTCTTTCTGAATTTTGCACAGAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| CDS-3UTR TCA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAACTTAAATTTCTGTCATaGATACGGCTTGTTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CYLSCIKSDKTYTEGSLELKFLS*IRLVSG Trigger: TCCAGAAACAAGCCGTATTCATGACAGAAATTTAAG...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR GCA 90 bp | CAAAACCTAACTTTATCCTTTCACCTAGAGTTTGAAACAGAGCTCTTGAGTAACTTCAATCTCTCCAGTTaGTGTATTCAACAAAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNLTLSFHLEFETELLSNFNLSS*CIQQNC Trigger: GCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAA...GTTACTCAAGAGCTCTGTTTCAAACTCTAGGTGAAAGGATAAAGTTAGGTTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| 3UTR CAA 72 bp | GAACGTAAGCATGAAACTCAGATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTGCTGGAAATTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: ERKHETQIQSLQ*LYSTKLLEIQL Trigger: TAATTGAATTTCCAGCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAATCTGAGTTTCATGCTTACGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033224.14 |
||
| CDS-3UTR CAA 90 bp | TGCAACGAAAAGTCCAAGAATCCAGTAGTGGTTCAGTCCATGAGGCCGCCGGATATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: CNEKSKNPVVVQSMRPPDIQSLQ*LYSTKL Trigger: CAGTTTTGTTGAATACAGCAACTGGAGAGATTGAAT...ATCCGGCGGCCTCATGGACTGAACCACTACTGGATTCTTGGACTTTTCGTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCAGGCAAAGAAGAAGCACTTTCTTCTTGCACATCCTTTCTCTAGGCTGAAGAATTGGATGTTCTaGAGGCTGAACGTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRQAKKKHFLLAHPFSRLKNWMF*RLNVSM Trigger: CATGCTTACGTTCAGCCTCAAGAACATCCAATTCTT...CAGCCTAGAGAAAGGATGTGCAAGAAGAAAGTGCTTCTTCTTTGCCTGCCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063902.14 |
||
| CDS-3UTR CAA 90 bp | TGCTATCTTTCCTGCATAAAGTCAGATAAGACATACACTGAAGGCAGTTTAGAAGGTGGGAGAATGCAGTaGGTCCACAGATGTCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: CYLSCIKSDKTYTEGSLEGGRMQ*VHRCRR Trigger: TCGTCGACATCTGTGGACCAACTGCATTCTCCCACC...TTCTAAACTGCCTTCAGTGTATGTCTTATCTGACTTTATGCAGGAAAGATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CAA 90 bp | GAGTTTGAAACAGAGCTCTTGAGTAACCGGCATGACCTGAAGGAAGTGAACAAGTTTCTGGCCAAAATCTaGGGATTCTTCTTAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EFETELLSNRHDLKEVNKFLAKI*GFFLVR Trigger: TCTCACTAAGAAGAATCCCAAGATTTTGGCCAGAAA...CTTGTTCACTTCCTTCAGGTCATGCCGGTTACTCAAGAGCTCTGTTTCAAACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CAA 90 bp | TCCCATGATCAAGAGCAACTGAAAAAGGAGATCCAGGAGCACGTGAAGAAGACTAGATCTGCTTTCATGTaGCTTTTTGGTTGCAATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SHDQEQLKKEIQEHVKKTRSAFM*LFGCNW Trigger: CCAATTGCAACCAAAAAGCAACATGAAAGCAGATCT...AGTCTTCTTCACGTGCTCCTGGATCTCCTTTTTCAGTTGCTCTTGATCATGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CAA 90 bp | AACAAGTGCTGGACTAACCTCTTCCTGCCCTTACTACCAACAGGTAGAATTTATAAGAATTGGATGTTCTaGAGGCTGAACGTAAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: NKCWTNLFLPLLPTGRIYKNWMF*RLNVSM Trigger: CATGCTTACGTTCAGCCTCAAGAACATCCAATTCTT...ATAAATTCTACCTGTTGGTAGTAAGGGCAGGAAGAGGTTAGTCCAGCACTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS GCA 90 bp | TTCAACAAAACTGCTGGAAATTCAATTATTTCAGGGCTACTGTGGTaGTTCCCATCATTCCAGCAGGTAGACTCAAAGTCAACGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: FNKTAGNSIISGLLW*FPSFQQVDSKSTTI Trigger: AATTGTCGTTGACTTTGAGTCTACCTGCTGGAATGATGGGAAGCACCACAGTAGCCCTGAAATAATTGAATTTCCAGCAGTTTTGTTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063902.14 ENSMUST00000106523.8 ENSMUST00000150844.3 |
||
| CDS GCA 90 bp | TTGAGGCTGAACGTAAGCATGAAACTCAGATTCAATCTCTCCAGTTaGTGTATTCAACAAAACTGCTGGAAATTCAATCAATCTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRLNVSMKLRFNLSS*CIQQNCWKFNQSAP Trigger: GGGAGCAGATTGATTGAATTTCCAGCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAATCTGAGTTTCATGCTTACGTTCAGCCTCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCCTTTCATGTTGCTTTTaGGTTGCAATTGGCCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: CFGQFSPQIYYARGFKQSLSCCF*VAIGPL Trigger: TAAAGGGCCAATTGCAACCAAAAAGCAACATGAAAG...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CAA 90 bp | TGGGTGTTTGGCTCCTTTTACATCATAGACTGTACTGTGAGGACTCTTATACACATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: WVFGSFYIIDCTVRTLIHIQSLQ*LYSTKL Trigger: CAGTTTTGTTGAATACAGCAACTGGAGAGATTGAAT...GTGTATAAGAGTCCTCACAGTACAGTCTATGATGTAAAAGGAGCCAAACACCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
||
| CDS-3UTR CAA 90 bp | TGCTTTGGACAGTTTTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: CFGQFSPQIYYARGFKQSIQSLQ*LYSTKL Trigger: CAGTTTTGTTGAATACAGCAACTGGAGAGATTGAAT...GCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAAAACTGTCCAAAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000139192.8 ENSMUST00000150844.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGGCTTTTTGGTTGCAATaGGCCCTTTATACAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKAFWLQ*ALYTGG Trigger: TCCTCCTGTATAAAGGGCCAATTGCAACCAAAAAGC...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
||
| CDS-3UTR CAA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGAGATGTCTCAGAGTTTaGAGGAGTTTCCTGAAGGTC | + |
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Preference number: 5 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKRCLRV*RSFLKV Trigger: GACCTTCAGGAAACTCCTCAAAACTCTGAGACATCT...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
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| CDS-3UTR CAA 90 bp | CTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTAATCAAAAACTCCGAGCATTTTCTGTCTTGTaGGTATTTCCCAACTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: LCERFQTELMTIVNQKLRAFSVL*VFPNWA Trigger: TGCCCAGTTGGGAAATACCAACAAGACAGAAAATGC...TCGGAGTTTTTGATTAACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
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| CDS-3UTR CAA 90 bp | TTTATTGTCCTGAATCCTGATTACAAGTCCCATGATCAAGAGCAACTGAAAAAGAGCTGCTTCTTCAACTaGATCTGTACCCAAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: FIVLNPDYKSHDQEQLKKSCFFN*ICTQIS Trigger: AGAAATTTGGGTACAGATCAAGTTGAAGAAGCAGCT...CTTTTTCAGTTGCTCTTGATCATGGGACTTGTAATCAGGATTCAGGACAATAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
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| CDS-3UTR CAA 90 bp | TTCTCCTCAGATATACTATGCGAGAGGTTTCAAACAGAGCTAATGACAATAGTTCATGTTGCTTTTTGGTaGCAATTGGCCCTTTATACA | + |
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Preference number: 5 (lower is better) Translates to: FSSDILCERFQTELMTIVHVAFW*QLALYT Trigger: TGTATAAAGGGCCAATTGCAACCAAAAAGCAACATG...AACTATTGTCATTAGCTCTGTTTGAAACCTCTCGCATAGTATATCTGAGGAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000150844.3 |
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| CDS GCA 72 bp | ACTGCTGGAAATTCAATTATTTCAGGGCTACTGTGGTaGTTCCCATCATTCCAGCAGGTAGACTCAAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: TAGNSIISGLLW*FPSFQQVDSKS Trigger: TGACTTTGAGTCTACCTGCTGGAATGATGGGAAGCACCACAGTAGCCCTGAAATAATTGAATTTCCAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063902.14 ENSMUST00000106523.8 ENSMUST00000150844.3 |
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| CDS CCA 72 bp | TTCAATCTCTCCAGTTGCTGTATTCAACAAAACTGCTaGAAATTCAATCAATCTGCTCCCTCCTGGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: FNLSSCCIQQNC*KFNQSAPSWIS Trigger: GGAAATCCAGGAGGGAGCAGATTGATTGAATTTCCAGCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
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| CDS CAA 90 bp | CTTGAGGCTGAACGTAAGCATGAAACTCAGATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTGCTGGAAATTCAATCAATCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LEAERKHETQIQSLQ*LYSTKLLEIQSICS Trigger: GGAGCAGATTGATTGAATTTCCAGCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAATCTGAGTTTCATGCTTACGTTCAGCCTCAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
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| CDS CAA 72 bp | GAACGTAAGCATGAAACTCAGATTCAATCTCTCCAGTaGCTGTATTCAACAAAACTGCTGGAAATTCAATCA | + |
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Preference number: 6 (lower is better) Translates to: ERKHETQIQSLQ*LYSTKLLEIQS Trigger: TGATTGAATTTCCAGCAGTTTTGTTGAATACAGCAACTGGAGAGATTGAATCTGAGTTTCATGCTTACGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139192.8 |
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