Pregenerated sensors for ERI1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031527Ensembl transcript IDs: ENSMUST00000033927.8, ENSMUST00000210884.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTACAGCAGGACAAGCAGGTCTCTAAAGGCTACAAGAAAGGGCCTTaGGGCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: LQQDKQVSKGYKKGP*GWRDGPRVECDGSC Trigger: GCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGCCTCAAGGCCCTTTCTTGTAGCCTTTAGAGACCTGCTTGTCCTGCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR GCA 90 bp | GCTCTTGCAGAGGCATTGACTCAGGATCCCAGCACCCACATTAGGTaGTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTCCACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ALAEALTQDPSTHIR*SWPPATPVLRRPQE Trigger: TTCCTGTGGACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGGATCCTGAGTCAATGCCTCTGCAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR GCA 90 bp | GAGGACAGCAGTCTCATTGTAGGGGGTTGGGAGCCACTATGTGGGTaGTGGGAATTGAACTTCAGGGCCTCTCAAAGAGCAGCCAGCACT | + |
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Preference number: 1 (lower is better) Translates to: EDSSLIVGGWEPLCG*WELNFRASQRAAST Trigger: AGTGCTGGCTGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CCA 90 bp | GCAGAGGCATTGACTCAGGATCCCAGCACCCACATTAGGTGCTCATaGCCACCTGCAACTCCAGTTCTGAGGCGTCCACAGGAATCTAAG | + |
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Preference number: 1 (lower is better) Translates to: AEALTQDPSTHIRCS*PPATPVLRRPQESK Trigger: CTTAGATTCCTGTGGACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGGATCCTGAGTCAATGCCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CCA 90 bp | GACAGCAGTCTCATTGTAGGGGGTTGGGAGCCACTATGTGGGTGCTaGGAATTGAACTTCAGGGCCTCTCAAAGAGCAGCCAGCACTCTT | + |
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Preference number: 1 (lower is better) Translates to: DSSLIVGGWEPLCGC*ELNFRASQRAASTL Trigger: AAGAGTGCTGGCTGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CCA 90 bp | AGAAGAGGACAGCAGTCTCATTGTAGGGGGTTGGGAGCCACTATGTaGGTGCTGGGAATTGAACTTCAGGGCCTCTCAAAGAGCAGCCAG | + |
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Preference number: 1 (lower is better) Translates to: RRGQQSHCRGLGATM*VLGIELQGLSKSSQ Trigger: CTGGCTGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTGTCCTCTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | AGAGTAAGTCAGTCCAGAGAGCCTGCTGGCTTCTGTCCCTCACAATaGCCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RVSQSREPAGFCPSQ*PFPVPLLQDRAHWG Trigger: TCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGTGAGGGACAGAAGCCAGCAGGCTCTCTGGACTGACTTACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | CTAGGGCATGAACCTGCCTGTGTCACCATGGCTTATGTGAGAAAATaGAGAGTAAGTCAGTCCAGAGAGCCTGCTGGCTTCTGTCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: LGHEPACVTMAYVRK*RVSQSREPAGFCPS Trigger: TGAGGGACAGAAGCCAGCAGGCTCTCTGGACTGACTTACTCTTCATTTTCTCACATAAGCCATGGTGACACAGGCAGGTTCATGCCCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | CTCGAGGTGGGTGACTTGACTGGTGCTCCTTGTATTGATCACTTGTaGTCCCTCCTTCCCCAGAAATCTTACTACCCACCCCTTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: LEVGDLTGAPCIDHL*SLLPQKSYYPPLLP Trigger: AGGAAGAAGGGGTGGGTAGTAAGATTTCTGGGGAAGGAGGGATCACAAGTGATCAATACAAGGAGCACCAGTCAAGTCACCCACCTCGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | TGCCACTTGGCTATCAGATTTGGTTCGTGGCTACAGTGTGTGCATTaGTGCTGTGTGGGGGCAGGAAGAGCTGAAATGAGGGTCAACACT | + |
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Preference number: 1 (lower is better) Translates to: CHLAIRFGSWLQCVH*CCVGAGRAEMRVNT Trigger: AGTGTTGACCCTCATTTCAGCTCTTCCTGCCCCCACACAGCATCAATGCACACACTGTAGCCACGAACCAAATCTGATAGCCAAGTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CCA 90 bp | CATACAAGCACTCTTGATTTTAACTTGCCACTTGGCTATCAGATTTaGTTCGTGGCTACAGTGTGTGCATTGATGCTGTGTGGGGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: HTSTLDFNLPLGYQI*FVATVCALMLCGGR Trigger: CCTGCCCCCACACAGCATCAATGCACACACTGTAGCCACGAACCAAATCTGATAGCCAAGTGGCAAGTTAAAATCAAGAGTGCTTGTATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | TTATATGGCTCAGAGTGGCTTCAGATTCACCTATGCCTTAACTCTTaGGGACTGAAATTACACATCTGTGCTACCAGGCTGCCTTTTCTA | + |
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Preference number: 1 (lower is better) Translates to: LYGSEWLQIHLCLNS*GLKLHICATRLPFL Trigger: TAGAAAAGGCAGCCTGGTAGCACAGATGTGTAATTTCAGTCCTCAAGAGTTAAGGCATAGGTGAATCTGAAGCCACTCTGAGCCATATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | GAACAAAACATTTCACCTCACAGTACTGAATACAAATGTTTACCATaGGCTCAAAAGCAGGGCGAATATACATTCACAATGGTGAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: EQNISPHSTEYKCLP*AQKQGEYTFTMVRE Trigger: TTCCCTCACCATTGTGAATGTATATTCGCCCTGCTTTTGAGCTCATGGTAAACATTTGTATTCAGTACTGTGAGGTGAAATGTTTTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | AACTTACAGACAGGTTATATCAGCAGAAAGCCAAATCAAATGGTTTaGCAGAGACTCAGAGTGAGTGAAGATGGCGAAATACTTAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: NLQTGYISRKPNQMV*QRLRVSEDGEILSR Trigger: TCTACTAAGTATTTCGCCATCTTCACTCACTCTGAGTCTCTGTCAAACCATTTGATTTGGCTTTCTGCTGATATAACCTGTCTGTAAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR TCA 90 bp | ACAATGGTGAGGGAAGGCAAGGAGCAAATCTTCAGATTTTCCCATTaGTTTGTAAGTTATAGCTCTCACAAGTTCACTTGTATTTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: TMVREGKEQIFRFSH*FVSYSSHKFTCIFY Trigger: GTAGAAAATACAAGTGAACTTGTGAGAGCTATAACTTACAAATCAATGGGAAAATCTGAAGATTTGCTCCTTGCCTTCCCTCACCATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CCA 90 bp | ATATATACTGGTCACTCACCAAGACAAGCCAGGTACTTTTTACTATaGAACAAAACATTTCACCTCACAGTACTGAATACAAATGTTTAC | + |
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Preference number: 1 (lower is better) Translates to: IYTGHSPRQARYFLL*NKTFHLTVLNTNVY Trigger: GTAAACATTTGTATTCAGTACTGTGAGGTGAAATGTTTTGTTCCATAGTAAAAAGTACCTGGCTTGTCTTGGTGAGTGACCAGTATATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTCTGCTGGCCAGAGAGTaGCGCAGGGGACAGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: PSTHIRCSWPPATPVLRRLLARE*RRGQLK Trigger: CTTCAGCTGTCCCCTGCGTCACTCTCTGGCCAGCAG...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 90 bp | GGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATaGACTCAGGATCCCAGCACCCACATTAGGTGCTCATGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: GEMAPELSATALAEA*TQDPSTHIRCSWPP Trigger: AGGTGGCCATGAGCACCTAATGTGGGTGCTGGGATCCTGAGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 90 bp | AAGGCTACAAGAAAGGGCCTTGAGGCTGGAGAGATGGCCCCAGAGTaGAGTGCGACGGCTCTTGCAGAGGCATTGACTCAGGATCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: KATRKGLEAGEMAPE*SATALAEALTQDPS Trigger: GCTGGGATCCTGAGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGCCTCAAGGCCCTTTCTTGTAGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTGTCCAGAGAGCCTGCTaGCTTCTGTCCCTCACAATG | + |
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Preference number: 2 (lower is better) Translates to: PSTHIRCSWPPATPVLRRVQRAC*LLSLTM Trigger: CATTGTGAGGGACAGAAGCCAGCAGGCTCTCTGGAC...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTCTTCCTGCTTTTGCTTaGCCCAGTCAGAGGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: AGEMAPELSATALAEALTLPAFA*PSQREK Trigger: CTTCTCCCTCTGACTGGGTCAAGCAAAAGCAGGAAG...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 90 bp | TTCTGCCTGCATGCCAGAAGAGGACAGCAGTCTCATTGTAGGGGGTaGGGAGCCACTATGTGGGTGCTGGGAATTGAACTTCAGGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FCLHARRGQQSHCRG*GATMWVLGIELQGL Trigger: GAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTGTCCTCTTCTGGCATGCAGGCAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTAAGCACTTTGCTGAGTaGACCAGAGTGAGTGACGCA | + |
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Preference number: 2 (lower is better) Translates to: PSTHIRCSWPPATPVLRRKHFAE*TRVSDA Trigger: TGCGTCACTCACTCTGGTCCACTCAGCAAAGTGCTT...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTTCTTCTTCCTGCTTTTaGTTGACCCAGTCAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PSTHIRCSWPPATPVLRRSSSCF*LTQSEG Trigger: TCCCTCTGACTGGGTCAAGCAAAAGCAGGAAGAAGA...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 90 bp | AGTCTCATTGTAGGGGGTTGGGAGCCACTATGTGGGTGCTGGGAATaGAACTTCAGGGCCTCTCAAAGAGCAGCCAGCACTCTTAACTTC | + |
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Preference number: 2 (lower is better) Translates to: SLIVGGWEPLCGCWE*NFRASQRAASTLNF Trigger: GAAGTTAAGAGTGCTGGCTGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTGATCAAAAGTGCTGGTaGCAAAGAATTTGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: AGEMAPELSATALAEALTDQKCW*QRIWCV Trigger: GACACACCAAATTCTTTGTCACCAGCACTTTTGATC...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACAGCACCCACATTAGGTaGTCATGGCCACCTGCAACT | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHSTHIR*SWPPAT Trigger: AGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCT...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACAGGACCAGTTTAGCATaGCTCCCATGGTCTTTCCTG | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHRTSLA*LPWSFL Trigger: CAGGAAAGACCATGGGAGTCATGCTAAACTGGTCCT...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTCTCCCACAAAATGTCTaGATACATACCCATCTATCT | + |
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Preference number: 2 (lower is better) Translates to: AGEMAPELSATALAEALTLPQNV*IHTHLS Trigger: AGATAGATGGGTATGTATGCAGACATTTTGTGGGAG...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACGGTAGCAAATTCTCATaGTCCCAAGCGCATCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHGSKFS*SQAHRC Trigger: ACAGCGATGCGCTTGGGACCATGAGAATTTGCTACC...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTTATAAAATTCAGTTCTaGGCAGAGACTGGTTACTGT | + |
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Preference number: 2 (lower is better) Translates to: AGEMAPELSATALAEALTYKIQF*AETGYC Trigger: ACAGTAACCAGTCTCTGCTCAGAACTGAATTTTATA...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTTTCACCTCACAGTACTaGATACAAATGTTTACCATG | + |
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Preference number: 2 (lower is better) Translates to: PSTHIRCSWPPATPVLRRFTSQY*IQMFTM Trigger: CATGGTAAACATTTGTATTCAGTACTGTGAGGTGAA...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | CCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAACCGCAAAGCCTCCAGACAGTATaGCATCATCATCTCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PFPVPLLQDRAHWGMKPQSLQTV*HHHLQS Trigger: GCTCTGGAGATGATGATGTCATACTGTCTGGAGGCT...TTGCGGTTTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACTTCTGTCCCTCACAATaGCCATTTCCTGTCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHFCPSQ*PFPVPL Trigger: CAAAGGGACAGGAAATGGTCATTGTGAGGGACAGAA...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACAGGAAAACAAGGAGATaGCCATGGCGACTGAGAAAA | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHRKTRR*PWRLRK Trigger: TTTTCTCAGTCGCCATGGTCATCTCCTTGTTTTCCT...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACTGTATTGATCACTTGTaGTCCCTCCTTCCCCAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHCIDHL*SLLPQK Trigger: TTTCTGGGGAAGGAGGGATCACAAGTGATCAATACA...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 90 bp | TCATCACTAAGGAAGTCAGTCTCCTCCAGCAGCTCAAAGTCTTCCTaGCAACAGGACACATACTCACAGACTTCACAAAGGACATGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SSLRKSVSSSSSKSS*QQDTYSQTSQRTWL Trigger: GAGCCATGTCCTTTGTGAAGTCTGTGAGTATGTGTCCTGTTGCAAGGAAGACTTTGAGCTGCTGGAGGAGACTGACTTCCTTAGTGATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAAACAGGCAATGCCAATaGGATGGGTCCAGGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TMTISCPFASRQSSLGNENRQCQ*DGSRKA Trigger: TGCTTTCCTGGACCCATCTCATTGGCATTGCCTGTT...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACCCAAATCAAATGGTTTaGCAGAGACTCAGAGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHPNQMV*QRLRVS Trigger: ACTCACTCTGAGTCTCTGTCAAACCATTTGATTTGG...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACGAAATTACACATCTGTaGTACCAGGCTGCCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHEITHL*YQAAFS Trigger: AGAAAAGGCAGCCTGGTAGCACAGATGTGTAATTTC...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACAAAACCTCTTCTTCCTaGTTTTGCTTGACCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHKTSSS*FCLTQS Trigger: TGACTGGGTCAAGCAAAAGCAGGAAGAAGAGGTTTT...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACTTATATGGCTCAGAGTaGCTTCAGATTCACCTATGC | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHLYGSE*LQIHLC Trigger: GCATAGGTGAATCTGAAGCCACTCTGAGCCATATAA...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACGGCATTAGTATGTCCTaGTATTCTCTAACTTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHGISMS*YSLTSQ Trigger: TTGGGAAGTTAGAGAATAGCAGGACATACTAATGCC...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR GCA 90 bp | TTCAACACTTGCAGAATCTGGTACCCACACAGCCTTCTTGGGACAAAGCCCTCAGTGTGTAACAAATACTaGTCAGATCAAAAGTGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FNTCRIWYPHSLLGTKPSVCNKY*SDQKCW Trigger: CCAGCACTTTTGATCTGAGCAGTATTTGTTACACAC...TGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGTACCAGATTCTGCAAGTGTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR CCA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAGCAATGCCAATGAGATaGGTCCAGGAAAGCATTAGA | + |
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Preference number: 2 (lower is better) Translates to: TMTISCPFASRQSSLGNEAMPMR*VQESIR Trigger: TCTAATGCTTTCCTGGACCCATCTCATTGGCATTGC...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACTCTACTGACACATTTTaGAATCAGGAGCTCATTATA | + |
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Preference number: 2 (lower is better) Translates to: ESISTGPAGIKEEFTAHHSTDTF*NQELII Trigger: TATAATGAGCTCCTGATTCCAAAATGTGTCAGTAGA...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR-3UTR TCA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAATTATCATCCTTGAGCTaGGTTGATTCTCTTAGTCTA | + |
|
Preference number: 2 (lower is better) Translates to: TMTISCPFASRQSSLGNELSSLS*VDSLSL Trigger: TAGACTAAGAGAATCAACTCAGCTCAAGGATGATAA...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTTCTCATTGTAGGGGGTaGGGAGCCACTATGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: AGEMAPELSATALAEALTSHCRG*GATMWV Trigger: CACCCACATAGTGGCTCCCAACCCCCTACAATGAGA...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | TGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTaGAGAGGCATTGACTCAGGATCCCAGCACCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: WRDGPRVECDGS*RGIDSGSQHPH Trigger: ATGTGGGTGCTGGGATCCTGAGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | GAGGCATTGACTCAGGATCCCAGCACCCACATTAGGTaGTCATGGCCACCTGCAACTCCAGTTCTGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: EALTQDPSTHIR*SWPPATPVLRR Trigger: ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGGATCCTGAGTCAATGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | CTCATTGTAGGGGGTTGGGAGCCACTATGTGGGTGCTaGGAATTGAACTTCAGGGCCTCTCAAAGAGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: LIVGGWEPLCGC*ELNFRASQRAA Trigger: GGCTGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | CAGCAGTCTCATTGTAGGGGGTTGGGAGCCACTATGTaGGTGCTGGGAATTGAACTTCAGGGCCTCTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QQSHCRGLGATM*VLGIELQGLSK Trigger: CTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | GGGAATGAAACCGCAAGCCTGGGTAGCAAATTCTCATaGTCCCAAGCGCATCGCTGTCGTTCCTCCTATGTC | + |
|
Preference number: 3 (lower is better) Translates to: GNETASLGSKFS*SQAHRCRSSYV Trigger: GACATAGGAGGAACGACAGCGATGCGCTTGGGACCATGAGAATTTGCTACCCAGGCTTGCGGTTTCATTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTCTGGTGACAAAGAATTaGGTGTGTCCTCCCACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PSTHIRCSWPPATPVLRRLVTKN*VCPPTK Trigger: TTTTGTGGGAGGACACACCAAATTCTTTGTCACCAG...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | CAGTCCAGAGAGCCTGCTGGCTTCTGTCCCTCACAATaGCCATTTCCTGTCCCTTTGCTTCAAGACAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSREPAGFCPSQ*PFPVPLLQDRA Trigger: AGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGTGAGGGACAGAAGCCAGCAGGCTCTCTGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | ACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTaGGGCGTCCACAGGAATCTAAGGGTACATGGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TLGAHGHLQLQF*GVHRNLRVHGA Trigger: TGCACCATGTACCCTTAGATTCCTGTGGACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | AGTCTCATTGTAGGGGGTTGGGAGCCACTATGTGGGTaGTGGGAATTGAACTTCAGGGCCTCTCAAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SLIVGGWEPLCG*WELNFRASQRA Trigger: TGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | ATGCCAGAAGAGGACAGCAGTCTCATTGTAGGGGGTTaGGAGCCACTATGTGGGTGCTGGGAATTGAACTTC | + |
|
Preference number: 3 (lower is better) Translates to: MPEEDSSLIVGG*EPLCGCWELNF Trigger: GAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTGTCCTCTTCTGGCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTTCTCCAGAGCACATCTaGACTTTAGAAGCAGGAATT | + |
|
Preference number: 3 (lower is better) Translates to: AGEMAPELSATALAEALTSPEHI*TLEAGI Trigger: AATTCCTGCTTCTAAAGTCAAGATGTGCTCTGGAGA...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTTTCTGGGAATTGAACTaGGATCTTCTACAAGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AGEMAPELSATALAEALTFWELN*DLLQEK Trigger: CTTCTCTTGTAGAAGATCCAAGTTCAATTCCCAGAA...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTCCAGTTTGTGTGGATTaGAAAATAATACAGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AGEMAPELSATALAEALTPVCVD*KIIQGE Trigger: TTCCCCCTGTATTATTTTCAAATCCACACAAACTGG...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | GCTATCAGATTTGGTTCGTGGCTACAGTGTGTGCATTaGTGCTGTGTGGGGGCAGGAAGAGCTGAAATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AIRFGSWLQCVH*CCVGAGRAEMR Trigger: CCTCATTTCAGCTCTTCCTGCCCCCACACAGCATCAATGCACACACTGTAGCCACGAACCAAATCTGATAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAACCCACACAGCCTTCTaGGGACAAAGCCCTCACTTC | + |
|
Preference number: 3 (lower is better) Translates to: TMTISCPFASRQSSLGNETHTAF*GQSPHF Trigger: GAAGTGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGT...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | GAACCTGCCTGTGTCACCATGGCTTATGTGAGAAAATaGAGAGTAAGTCAGTCCAGAGAGCCTGCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: EPACVTMAYVRK*RVSQSREPAGF Trigger: GAAGCCAGCAGGCTCTCTGGACTGACTTACTCTTCATTTTCTCACATAAGCCATGGTGACACAGGCAGGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | GGTGACTTGACTGGTGCTCCTTGTATTGATCACTTGTaGTCCCTCCTTCCCCAGAAATCTTACTACCCACCC | + |
|
Preference number: 3 (lower is better) Translates to: GDLTGAPCIDHL*SLLPQKSYYPP Trigger: GGGTGGGTAGTAAGATTTCTGGGGAAGGAGGGATCACAAGTGATCAATACAAGGAGCACCAGTCAAGTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | TTCACAAAGGACATGGCTCACTCGAGGTGGGTGACTTaGCTGGTGCTCCTTGTATTGATCACTTGTGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: FTKDMAHSRWVT*LVLLVLITCDP Trigger: GGGATCACAAGTGATCAATACAAGGAGCACCAGTCAAGTCACCCACCTCGAGTGAGCCATGTCCTTTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | CCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTaGGGAATGAAACCGCAAGCCTGGGTAGCAAATTCT | + |
|
Preference number: 3 (lower is better) Translates to: PFPVPLLQDRAH*GMKPQAWVANS Trigger: AGAATTTGCTACCCAGGCTTGCGGTTTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | GAGAAAATGAAGAGTAAGTCAGTCCAGAGAGCCTGCTaGCTTCTGTCCCTCACAATGACCATTTCCTGTCCC | + |
|
Preference number: 3 (lower is better) Translates to: EKMKSKSVQRAC*LLSLTMTISCP Trigger: GGGACAGGAAATGGTCATTGTGAGGGACAGAAGCCAGCAGGCTCTCTGGACTGACTTACTCTTCATTTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | ATCATTACACACGGAAAGCATCTCAACAGGCCCCGCTaGAATAAAGGAGGAGTTCACAGCTCATCACTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IITHGKHLNRPR*NKGGVHSSSLR Trigger: CCTTAGTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTCCGTGTGTAATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACTGTGGGTTCTGGGAATaGAACTTGGATCTTCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: ESISTGPAGIKEEFTAHHCGFWE*NLDLLQ Trigger: TTGTAGAAGATCCAAGTTCAATTCCCAGAACCCACA...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | AGGGCCTCTCAAAGAGCAGCCAGCACTCTTAACTTCTaGGGCATCTCTCCAGCCCAGTATTCTAAATTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: RASQRAASTLNF*GISPAQYSKFS Trigger: ACTAAATTTAGAATACTGGGCTGGAGAGATGCCTCAGAAGTTAAGAGTGCTGGCTGCTCTTTGAGAGGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | TGTGAGAAAATGAAGAGTAAGTCAGTCCAGAGAGCCTaGTGGCTTCTGTCCCTCACAATGACCATTTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: CEKMKSKSVQRA*WLLSLTMTISC Trigger: ACAGGAAATGGTCATTGTGAGGGACAGAAGCCAGCAGGCTCTCTGGACTGACTTACTCTTCATTTTCTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACCTCTCACAAGTTCACTaGTATTTTCTACTGACACAT | + |
|
Preference number: 3 (lower is better) Translates to: ESISTGPAGIKEEFTAHHLSQVH*YFLLTH Trigger: ATGTGTCAGTAGAAAATACAAGTGAACTTGTGAGAG...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | GGCTTCAGATTCACCTATGCCTTAACTCTTGAGGACTaGAATTACACATCTGTGCTACCAGGCTGCCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GFRFTYALTLED*NYTSVLPGCLF Trigger: GAAAAGGCAGCCTGGTAGCACAGATGTGTAATTTCAGTCCTCAAGAGTTAAGGCATAGGTGAATCTGAAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | TCAGAGTGGCTTCAGATTCACCTATGCCTTAACTCTTaGGGACTGAAATTACACATCTGTGCTACCAGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEWLQIHLCLNS*GLKLHICATRL Trigger: CAGCCTGGTAGCACAGATGTGTAATTTCAGTCCTCAAGAGTTAAGGCATAGGTGAATCTGAAGCCACTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | GGACGATACTTAGTGGGACTACTCATTTACCAACACTaGAATCATTACACACGGAAAGCATCTCAACAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GRYLVGLLIYQH*NHYTRKASQQA Trigger: GGCCTGTTGAGATGCTTTCCGTGTGTAATGATTGCAGTGTTGGTAAATGAGTAGTCCCACTAAGTATCGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | TTGCCTGTTGGATTCTTTGAAACTTACAGATGGTTGTaGGCCACCATGTGGGTTCTGGGAATTGAACTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPVGFFETYRWL*ATMWVLGIELG Trigger: TCCAAGTTCAATTCCCAGAACCCACATGGTGGCTCACAACCATCTGTAAGTTTCAAAGAATCCAACAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAATGCCTGTTGGATTCTTaGAAACTTACAGATGGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TMTISCPFASRQSSLGNECLLDS*KLTDGC Trigger: ACAACCATCTGTAAGTTTCAAAGAATCCAACAGGCA...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | TGCAATCAGGTGACAAGCAATTATTTTTCTAGGGCATaGACCTGCCTGTGTCACCATGGCTTATGTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CNQVTSNYFSRA*TCLCHHGLCEK Trigger: TTTCTCACATAAGCCATGGTGACACAGGCAGGTTCATGCCCTAGAAAAATAATTGCTTGTCACCTGATTGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | ACTCTTGATTTTAACTTGCCACTTGGCTATCAGATTTaGTTCGTGGCTACAGTGTGTGCATTGATGCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TLDFNLPLGYQI*FVATVCALMLC Trigger: ACACAGCATCAATGCACACACTGTAGCCACGAACCAAATCTGATAGCCAAGTGGCAAGTTAAAATCAAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAAAATGTTTAAGGTGCTaGAAGGTTGCATTAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: TMTISCPFASRQSSLGNEKCLRC*KVALTQ Trigger: CTGAGTTAATGCAACCTTCAAGCACCTTAAACATTT...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | ACACATGCATACATACAAGCACTCTTGATTTTAACTTaGCACTTGGCTATCAGATTTGGTTCGTGGCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: THAYIQALLILT*HLAIRFGSWLQ Trigger: CTGTAGCCACGAACCAAATCTGATAGCCAAGTGGCAAGTTAAAATCAAGAGTGCTTGTATGTATGCATGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | ACAGGTTATATCAGCAGAAAGCCAAATCAAATGGTTTaGCAGAGACTCAGAGTGAGTGAAGATGGCGAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TGYISRKPNQMV*QRLRVSEDGEI Trigger: TATTTCGCCATCTTCACTCACTCTGAGTCTCTGTCAAACCATTTGATTTGGCTTTCTGCTGATATAACCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CCA 72 bp | GGTCACTCACCAAGACAAGCCAGGTACTTTTTACTATaGAACAAAACATTTCACCTCACAGTACTGAATACA | + |
|
Preference number: 3 (lower is better) Translates to: GHSPRQARYFLL*NKTFHLTVLNT Trigger: TGTATTCAGTACTGTGAGGTGAAATGTTTTGTTCCATAGTAAAAAGTACCTGGCTTGTCTTGGTGAGTGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | CAACTTCCTGGCTTGAATATAGGCTATACACAGATATaGCGAAAATGTTCCAAGAAGAAACACCTGAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: QLPGLNIGYTQI*RKCSKKKHLNL Trigger: CAAATTCAGGTGTTTCTTCTTGGAACATTTTCGGCATATCTGTGTATAGCCTATATTCAAGCCAGGAAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | AAAAGGATGTATATATTATATATACAACATTCTGCCTaGATGCCAGAAGAGGACAGCAGTCTCATTGTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KRMYILYIQHSA*MPEEDSSLIVG Trigger: CCCTACAATGAGACTGCTGTCCTCTTCTGGCATGCAGGCAGAATGTTGTATATATAATATATACATCCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | TTTTATGTTTATGAATGTTTTGCCTGTTGGATTCTTTaGAACTTACAGATGGTTGTGAGCCACCATGTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: FYVYECFACWIL*NLQMVVSHHVG Trigger: ACCCACATGGTGGCTCACAACCATCTGTAAGTTTCAAAGAATCCAACAGGCAAAACATTCATAAACATAAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR TCA 72 bp | ATTTCACCTCACAGTACTGAATACAAATGTTTACCATaGGCTCAAAAGCAGGGCGAATATACATTCACAATG | + |
|
Preference number: 3 (lower is better) Translates to: ISPHSTEYKCLP*AQKQGEYTFTM Trigger: CATTGTGAATGTATATTCGCCCTGCTTTTGAGCTCATGGTAAACATTTGTATTCAGTACTGTGAGGTGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | TATGTGGGAGAACGTGTAGGTTATATAGAAACATTATaGCACTTGAACTATAGAACTTCAACACTTGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: YVGERVGYIETL*HLNYRTSTLAE Trigger: TTCTGCAAGTGTTGAAGTTCTATAGTTCAAGTGGCATAATGTTTCTATATAACCTACACGTTCTCCCACATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR GCA 72 bp | TTTAAAAAGGATGTATATATTATATATACAACATTCTaGCTGCATGCCAGAAGAGGACAGCAGTCTCATTGT | + |
|
Preference number: 3 (lower is better) Translates to: FKKDVYIIYTTF*LHARRGQQSHC Trigger: ACAATGAGACTGCTGTCCTCTTCTGGCATGCAGGCAGAATGTTGTATATATAATATATACATCCTTTTTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CAA 72 bp | AGAAAGGGCCTTGAGGCTGGAGAGATGGCCCCAGAGTaGAGTGCGACGGCTCTTGCAGAGGCATTGACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKGLEAGEMAPE*SATALAEALTQ Trigger: CTGAGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGCCTCAAGGCCCTTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTTGTAAACCGGGTCACTaGAGTCACTGCCATTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSTHIRCSWPPATPVLRRCKPGH*SHCHWR Trigger: CCTCCAATGGCAGTGACTTCAGTGACCCGGTTTACA...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CAA 72 bp | GTAGGGGGTTGGGAGCCACTATGTGGGTGCTGGGAATaGAACTTCAGGGCCTCTCAAAGAGCAGCCAGCACT | + |
|
Preference number: 4 (lower is better) Translates to: VGGWEPLCGCWE*NFRASQRAAST Trigger: AGTGCTGGCTGCTCTTTGAGAGGCCCTGAAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTCAGAACTCTGAAAGCTaGTCATTGACTTCTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAPELSATALAEALTQNSES*SLTSGL Trigger: GAGGCCAGAAGTCAATGATCAGCTTTCAGAGTTCTG...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTCTGAAAGCTGATCATTaGCTTCTGGCCTCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: PSTHIRCSWPPATPVLRRLKADH*LLASHT Trigger: AGTATGTGAGGCCAGAAGTCAATGATCAGCTTTCAG...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| 3UTR CAA 72 bp | CATGCCAGAAGAGGACAGCAGTCTCATTGTAGGGGGTaGGGAGCCACTATGTGGGTGCTGGGAATTGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: HARRGQQSHCRG*GATMWVLGIEL Trigger: AAGTTCAATTCCCAGCACCCACATAGTGGCTCCCAACCCCCTACAATGAGACTGCTGTCCTCTTCTGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTACAACCGTTTGTCATTaGGATCTCTTTGTAAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAPELSATALAEALTTTVCH*DLFVNR Trigger: CCGGTTTACAAAGAGATCGCAATGACAAACGGTTGT...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CCA 90 bp | CCCAGCACCCACATTAGGTGCTCATGGCCACCTGCAACTCCAGTTCTGAGGCGTGTTTGGTCTGGCTTCTaGGAACCTTATAGAAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: PSTHIRCSWPPATPVLRRVWSGF*EPYRSF Trigger: GAAACTTCTATAAGGTTCCCAGAAGCCAGACCAAAC...ACGCCTCAGAACTGGAGTTGCAGGTGGCCATGAGCACCTAATGTGGGTGCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CCA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTGCATTATTGTTAGTTTaGTCTGGCTTCTGGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: AGEMAPELSATALAEALTALLLV*SGFWEP Trigger: AGGTTCCCAGAAGCCAGACCAAACTAACAATAATGC...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR TCA 90 bp | TTCAACACTTGCAGAATCTGGTACCCACACAGCCTTCTTGGGACAAAGCCCTCAGGCCTCACATACTGCTaGAACGTATCTTCGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FNTCRIWYPHSLLGTKPSGLTYC*NVSSIS Trigger: AGAAATCGAAGATACGTTTCAGCAGTATGTGAGGCC...TGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGTACCAGATTCTGCAAGTGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR GCA 90 bp | TTCAACACTTGCAGAATCTGGTACCCACACAGCCTTCTTGGGACAAAGCCCTCAATCCATCTGTCTCTTTaGCATCAAGTCTGCATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FNTCRIWYPHSLLGTKPSIHLSL*HQVCIA Trigger: AGCGATGCAGACTTGATGGCAAAGAGACAGATGGAT...TGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGTACCAGATTCTGCAAGTGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CCA 90 bp | CCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAACCGCAATTACTTTCTACTATGTaGCATCTGTGGAGCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PFPVPLLQDRAHWGMKPQLLSTM*HLWSWS Trigger: GCTCCAGCTCCACAGATGCCACATAGTAGAAAGTAA...TTGCGGTTTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR TCA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACCAACAGGAAACTCAATaGTTTCATGTAGGAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESISTGPAGIKEEFTAHHQQETQ*FHVGTQ Trigger: CTGAGTTCCTACATGAAATCATTGAGTTTCCTGTTG...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 72 bp | TCAACACTTGCAGAATCTGGTACCCACACAGCCTTCTaGGGACAAAGCCCTCACTTCACCTACAAACTTACA | + |
|
Preference number: 4 (lower is better) Translates to: STLAESGTHTAF*GQSPHFTYKLT Trigger: TGTAAGTTTGTAGGTGAAGTGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGTACCAGATTCTGCAAGTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR TCA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAAAGTTCCCAACTCCTTTaGCTTCATCCACTCAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TMTISCPFASRQSSLGNESSQLL*LHPLNH Trigger: GTGATTGAGTGGATGAAGTCAAAGGAGTTGGGAACT...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR TCA 90 bp | TTCAACACTTGCAGAATCTGGTACCCACACAGCCTTCTTGGGACAAAGCCCTCAATAGAAGTTTCCGTATaGCTTCCGGATATTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FNTCRIWYPHSLLGTKPSIEVSV*LPDIDP Trigger: TGGATCAATATCCGGAAGTCATACGGAAACTTCTAT...TGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGTACCAGATTCTGCAAGTGTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CCA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAACTGATCATTGACTTCTaGCCTCACATACTGCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TMTISCPFASRQSSLGNELIIDF*PHILLK Trigger: TTTCAGCAGTATGTGAGGCCAGAAGTCAATGATCAG...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 72 bp | ATATGCCGAAAATGTTCCAAGAAGAAACACCTGAATTaGCTGCTCAGCAAGCACTTTGCTGAGTGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICRKCSKKKHLN*LLSKHFAEWTR Trigger: TCTGGTCCACTCAGCAAAGTGCTTGCTGAGCAGCAAATTCAGGTGTTTCTTCTTGGAACATTTTCGGCATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 72 bp | GGTTGTGAGCCACCATGTGGGTTCTGGGAATTGAACTaGGATCTTCTACAAGAGAAGCAAGTACTTTTAACC | + |
|
Preference number: 4 (lower is better) Translates to: GCEPPCGFWELN*DLLQEKQVLLT Trigger: GGTTAAAAGTACTTGCTTCTCTTGTAGAAGATCCAAGTTCAATTCCCAGAACCCACATGGTGGCTCACAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR TCA 90 bp | ACAATGACCATTTCCTGTCCCTTTGCTTCAAGACAGAGCTCACTGGGGAATGAATCTTTAGAACATCCTTaGCTCCTCTTGTTTCAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TMTISCPFASRQSSLGNESLEHP*LLLFQA Trigger: AGCTTGAAACAAGAGGAGTCAAGGATGTTCTAAAGA...TTCATTCCCCAGTGAGCTCTGTCTTGAAGCAAAGGGACAGGAAATGGTCATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 72 bp | ATACTGCTCAGATCAAAAGTGCTGGTGACAAAGAATTaGGTGTGTCCTCCCACAAAATGTCTGCATACATAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLRSKVLVTKN*VCPPTKCLHTY Trigger: GTATGTATGCAGACATTTTGTGGGAGGACACACCAAATTCTTTGTCACCAGCACTTTTGATCTGAGCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| 3UTR CAA 72 bp | CACACATGCATACATACAAGCACTCTTGATTTTAACTaGCCACTTGGCTATCAGATTTGGTTCGTGGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: HTCIHTSTLDFN*PLGYQIWFVAT Trigger: TGTAGCCACGAACCAAATCTGATAGCCAAGTGGCAAGTTAAAATCAAGAGTGCTTGTATGTATGCATGTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS GCA 90 bp | ACGCTCAGCGGCCGGGACTCCTCACACTCCGGCCGCGGCGTCTTCTaGTGCGCCGCGTCGCCGCCACGCTCCCGGCCCCGCTCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSGRDSSHSGRGVF*CAASPPRSRPRSSS Trigger: GGAGGACGAGCGGGGCCGGGAGCGTGGCGGCGACGCGGCGCAGCAGAAGACGCCGCGGCCGGAGTGTGAGGAGTCCCGGCCGCTGAGCGT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTGATCCATCTGTCTCTTaGCCATCAAGTCTGCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: AGEMAPELSATALAEALTDPSVS*PSSLHR Trigger: GCGATGCAGACTTGATGGCAAAGAGACAGATGGATC...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS CCA 90 bp | CACTTCTTAGCGAAGGCCGGGTGTTTGAGTCTGCTGAGCCGGCACTaGATGCTCAGGAACTTACTCATATCCCAGGAGCCATCTGTTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HFLAKAGCLSLLSRH*MLRNLLISQEPSVS Trigger: ACTAACAGATGGCTCCTGGGATATGAGTAAGTTCCTGAGCATCCAGTGCCGGCTCAGCAGACTCAAACACCCGGCCTTCGCTAAGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTTACAACCGTTTGTCATaGCGATCTCTTTGTAAACCG | + |
|
Preference number: 5 (lower is better) Translates to: AGEMAPELSATALAEALTYNRLS*RSLCKP Trigger: CGGTTTACAAAGAGATCGCAATGACAAACGGTTGTA...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CAA 90 bp | GCTGGAGAGATGGCCCCAGAGTTGAGTGCGACGGCTCTTGCAGAGGCATTGACTTATGACTTCCGGATATaGATCCACTTCTTAGCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGEMAPELSATALAEALTYDFRI*IHFLAK Trigger: CTTCGCTAAGAAGTGGATCAATATCCGGAAGTCATA...AGTCAATGCCTCTGCAAGAGCCGTCGCACTCAACTCTGGGGCCATCTCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CAA 90 bp | TTCAACACTTGCAGAATCTGGTACCCACACAGCCTTCTTGGGACAAAGCCCTCAAGCATTATTGTTAGTTaGGTCTGGCTTCTGGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: FNTCRIWYPHSLLGTKPSSIIVS*VWLLGT Trigger: GGTTCCCAGAAGCCAGACCAAACTAACAATAATGCT...TGAGGGCTTTGTCCCAAGAAGGCTGTGTGGGTACCAGATTCTGCAAGTGTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS TCA 90 bp | GTCTACCTGATCCTGAGTGATTCCAGTAAGACCGATGCAGAACTCTaGAAGCTGATCATTGACTTCTGGCCTCACATACTGCTGAAACGT | + |
|
Preference number: 5 (lower is better) Translates to: VYLILSDSSKTDAEL*KLIIDFWPHILLKR Trigger: ACGTTTCAGCAGTATGTGAGGCCAGAAGTCAATGATCAGCTTTCAGAGTTCTGCATCGGTCTTACTGGAATCACTCAGGATCAGGTAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CAA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACTTCTTTAGAACATCCTaGACTCCTCTTGTTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESISTGPAGIKEEFTAHHFFRTS*TPLVSS Trigger: GCTTGAAACAAGAGGAGTCAAGGATGTTCTAAAGAA...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS-3UTR CAA 90 bp | GAAAGCATCTCAACAGGCCCCGCTGGAATAAAGGAGGAGTTCACAGCTCATCACGTTAGTATACAGTACTaGTACTTAGTTCCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ESISTGPAGIKEEFTAHHVSIQY*YLVPNS Trigger: GGAGTTGGGAACTAAGTACAAGTACTGTATACTAAC...GTGATGAGCTGTGAACTCCTCCTTTATTCCAGCGGGGCCTGTTGAGATGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS CCA 72 bp | GCGAAGGCCGGGTGTTTGAGTCTGCTGAGCCGGCACTaGATGCTCAGGAACTTACTCATATCCCAGGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AKAGCLSLLSRH*MLRNLLISQEP Trigger: TGGCTCCTGGGATATGAGTAAGTTCCTGAGCATCCAGTGCCGGCTCAGCAGACTCAAACACCCGGCCTTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS GCA 72 bp | GATCCATCTGTCTCTTTGCCATCAAGTCTGCATCGCTaGTTTTTCTCCACGCTCAGCGGCCGGGACTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DPSVSLPSSLHR*FFSTLSGRDSS Trigger: TGAGGAGTCCCGGCCGCTGAGCGTGGAGAAAAAGCAGCGATGCAGACTTGATGGCAAAGAGACAGATGGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS CAA 72 bp | CGGATATTGATCCACTTCTTAGCGAAGGCCGGGTGTTaGAGTCTGCTGAGCCGGCACTGGATGCTCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RILIHFLAKAGC*SLLSRHWMLRN Trigger: GTTCCTGAGCATCCAGTGCCGGCTCAGCAGACTCAAACACCCGGCCTTCGCTAAGAAGTGGATCAATATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS CAA 90 bp | TATGACTTCCGGATATTGATCCACTTCTTAGCGAAGGCCGGGTGTTaGAGTCTGCTGAGCCGGCACTGGATGCTCAGGAACTTACTCATA | + |
|
Preference number: 6 (lower is better) Translates to: YDFRILIHFLAKAGC*SLLSRHWMLRNLLI Trigger: TATGAGTAAGTTCCTGAGCATCCAGTGCCGGCTCAGCAGACTCAAACACCCGGCCTTCGCTAAGAAGTGGATCAATATCCGGAAGTCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS TCA 72 bp | GGTCTGGCTTCTGGGAACCTTATAGAAGTTTCCGTATaGCTTCCGGATATTGATCCACTTCTTAGCGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLASGNLIEVSV*LPDIDPLLSEG Trigger: GCCTTCGCTAAGAAGTGGATCAATATCCGGAAGTCATACGGAAACTTCTATAAGGTTCCCAGAAGCCAGACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS TCA 72 bp | AGGTGTGTGTATTCAACAGGACAACAGGAAACTCAATaGTTTCATGTAGGAACTCAGCTGGGTTCCCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RCVYSTGQQETQ*FHVGTQLGSPL Trigger: AAGAGGGGAACCCAGCTGAGTTCCTACATGAAATCATTGAGTTTCCTGTTGTCCTGTTGAATACACACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000033927.8 ENSMUST00000210884.2 |
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| CDS CAA 72 bp | CTCATATCCCAGGAGCCATCTGTTAGTATACAGTACTaGTACTTAGTTCCCAACTCCTTTGACTTCATCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LISQEPSVSIQY*YLVPNSFDFIH Trigger: GTGGATGAAGTCAAAGGAGTTGGGAACTAAGTACAAGTACTGTATACTAACAGATGGCTCCTGGGATATGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS CAA 90 bp | AGGAACTTACTCATATCCCAGGAGCCATCTGTTAGTATACAGTACTaGTACTTAGTTCCCAACTCCTTTGACTTCATCCACTCAATCACT | + |
|
Preference number: 6 (lower is better) Translates to: RNLLISQEPSVSIQY*YLVPNSFDFIHSIT Trigger: AGTGATTGAGTGGATGAAGTCAAAGGAGTTGGGAACTAAGTACAAGTACTGTATACTAACAGATGGCTCCTGGGATATGAGTAAGTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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| CDS CAA 90 bp | TGTGAGGCCGTCCATCATAATCCATTCCTAATTTTTCAAGCATTATaGTTAGTTTGGTCTGGCTTCTGGGAACCTTATAGAAGTTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: CEAVHHNPFLIFQAL*LVWSGFWEPYRSFR Trigger: ACGGAAACTTCTATAAGGTTCCCAGAAGCCAGACCAAACTAACAATAATGCTTGAAAAATTAGGAATGGATTATGATGGACGGCCTCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033927.8 |
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