Pregenerated sensors for ERGIC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005881Ensembl transcript IDs: ENSMUST00000006035.13, ENSMUST00000088650.11, ENSMUST00000142859.8, ENSMUST00000155370.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATaGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGG | + |
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Preference number: 1 (lower is better) Translates to: NSYLLPWAGLAEERI*VVDRLEGKPTGEER Trigger: CCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| 3UTR CCA 72 bp | TTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATaGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGG | + |
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Preference number: 3 (lower is better) Translates to: LLPWAGLAEERI*VVDRLEGKPTG Trigger: CCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | GACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGCACCCCCGCAGGTCTTaGCCCGGAAGTCCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: DRLEGKPTGEERAGQAVGHPRRS*PGSPPE Trigger: CTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGTG...CCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | TGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGCACCCCCGCAGGTCTTaGCCCGGAAGTCCTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: WRVNPQGKRGQDKLWGREHPRRS*PGSPPE Trigger: CTCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGTG...CTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | GACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGTCCACATCCAGCTGCTaGTCCCCGGCCACGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: DRLEGKPTGEERAGQAVGSTSSC*SPATSM Trigger: CATGGACGTGGCCGGGGAGCAGCAGCTGGATGTGGA...CCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGACCCCCGGCAGGCCCTaGTCACCCAGGAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VDRLEGKPTGEERAGQAVTPGRP*SPRSPL Trigger: CAATGGGCTCCTGGGTGACCAGGGCCTGCCGGGGGT...CACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | AGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGTGCCGTTCAGCCTCTaGGCTCACGGGGACGCCATC | + |
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Preference number: 4 (lower is better) Translates to: RIWVVDRLEGKPTGEERAVPFSL*AHGDAI Trigger: GATGGCGTCCCCGTGAGCTCAGAGGCTGAACGGCAC...TGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | AGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCATGGTGTCCGGGTTCTTaGAGGCCCAGCCTCGACGGC | + |
|
Preference number: 4 (lower is better) Translates to: RIWVVDRLEGKPTGEERAWCPGS*RPSLDG Trigger: GCCGTCGAGGCTGGGCCTTCAAGAACCCGGACACCA...TGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | AGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGAGACCTGCATCTTCTGGCTaGAGCCCTCTCGCCGACACT | + |
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Preference number: 4 (lower is better) Translates to: RVNPQGKRGQDKLWGRERPASSG*SPLADT Trigger: AGTGTCGGCGAGAGGGCTTCAGCCAGAAGATGCAGG...TCTCTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGAGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGTGTTCCACATCCAGCTaGTGCTCCCCGGCCACGTCC | + |
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Preference number: 4 (lower is better) Translates to: EERIWVVDRLEGKPTGEECSTSS*CSPATS Trigger: GGACGTGGCCGGGGAGCAGCAGCTGGATGTGGAACA...CTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | ATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGATGTTCCACATCCAGCTaGTGCTCCCCGGCCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: IWVVDRLEGKPTGEERAGCSTSS*CSPATS Trigger: GGACGTGGCCGGGGAGCAGCAGCTGGATGTGGAACA...TCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | TGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGAGCTCTCACAGCGATTaGGGTCCAAGGAGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: WRVNPQGKRGQDKLWGRESSHSD*GPRSWG Trigger: ACCCCAACTCCTTGGACCCCAATCGCTGTGAGAGCT...CTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | ATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACCCTCTCGCCGACACTaGTCAATGGTGTCCGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: IWVVDRLEGKPTGEERAGPSRRH*SMVSGF Trigger: GAACCCGGACACCATTGAGCAGTGTCGGCGAGAGGG...TCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | GACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGCAGCCTTCATTCTTCTaGTCCTGCATCTTCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DRLEGKPTGEERAGQAVGQPSFF*SCIFWL Trigger: CAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTG...CCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | TTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGCTGGTCACGGAGAACTaGTTAGTCCTCAGCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTGWRVNPQGKRGQDKLWLVTEN*LVLSTS Trigger: GGAGGTGCTGAGGACTAACCAGTTCTCCGTGACCAG...CCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | ATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGGACCCCCGGCAGGCCCTaGTCACCCAGGAGCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: ITIHIYCPGLGWLRRGYGTPGRP*SPRSPL Trigger: CAATGGGCTCCTGGGTGACCAGGGCCTGCCGGGGGT...CCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTACTTTCCCAAGCTCGTaGCGTTCAGCCTCTGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVDRLEGKPTGEERAGQATFPSS*RSASEL Trigger: GAGCTCAGAGGCTGAACGGCACGAGCTTGGGAAAGT...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | TGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAATTGGCAACCTTCTCGTaGCTGGTCACGGAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: WVVDRLEGKPTGEERAGQLATFS*LVTENW Trigger: CCAGTTCTCCGTGACCAGGCACGAGAAGGTTGCCAA...TTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGCAGTCACGTTGGTGTaGTCTAGGGGGTTCACGATT | + |
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Preference number: 4 (lower is better) Translates to: VDRLEGKPTGEERAGQAVAVTLV*SRGFTI Trigger: AATCGTGAACCCCCTAGACCACACCAACGTGACTGC...CACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGAGGTCAATTTTCTTCTaGATGGCCCGAGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDRLEGKPTGEERAGQAVRSIFF*MARAEW Trigger: CCACTCCGCTCGGGCCATCCAGAAGAAAATTGACCT...CACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | TGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAACTGTCAGAAAGTGGGTaGAGGACCTGTGTTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WVVDRLEGKPTGEERAGQLSESG*RTCVSP Trigger: CGGAGAAACACAGGTCCTTCACCCACTTTCTGACAG...TTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGAGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGTTGGCAACCTTCTCGTaGCTGGTCACGGAGAACTGG | + |
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Preference number: 4 (lower is better) Translates to: EERIWVVDRLEGKPTGEELATFS*LVTENW Trigger: CCAGTTCTCCGTGACCAGGCACGAGAAGGTTGCCAA...CTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | AGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAAGCTCTCACAGCGATTaGGGTCCAAGGAGTTGGGGT | + |
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Preference number: 4 (lower is better) Translates to: RIWVVDRLEGKPTGEERASSHSD*GPRSWG Trigger: ACCCCAACTCCTTGGACCCCAATCGCTGTGAGAGCT...TGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGCAGTCACGTTGGTGTaGTCTAGGGGGTTCACGATT | + |
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Preference number: 4 (lower is better) Translates to: VVDRLEGKPTGEERAGQAAVTLV*SRGFTI Trigger: AATCGTGAACCCCCTAGACCACACCAACGTGACTGC...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | AGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGAGAAGTACTGGAACATCATaGAGGCTTGGGGTGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RVNPQGKRGQDKLWGRERSTGTS*RLGVQS Trigger: TGACTGCACCCCAAGCCTCCATGATGTTCCAGTACT...TCTCTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGACCTTCACAAAGTACTaGAACATCATGGAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: DRLEGKPTGEERAGQAVGTFTKY*NIMEAW Trigger: CCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGT...CCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | TGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGACACCTGTCAGAAAGTaGGTGAAGGACCTGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: WRVNPQGKRGQDKLWGRETPVRK*VKDLCF Trigger: GAAACACAGGTCCTTCACCCACTTTCTGACAGGTGT...CTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGCAATTTTCTTCTGGATaGCCCGAGCGGAGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VDRLEGKPTGEERAGQAVQFSSG*PERSGR Trigger: TCTACCACTCCGCTCGGGCCATCCAGAAGAAAATTG...CACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | TATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGTCCACATCCAGCTGCTaGTCCCCGGCCACGTCCATG | + |
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Preference number: 4 (lower is better) Translates to: YHNSYLLPWAGLAEERIWSTSSC*SPATSM Trigger: CATGGACGTGGCCGGGGAGCAGCAGCTGGATGTGGA...CCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTAAGAAGCCGTACACCTaGCAGCCTTCATTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: VVDRLEGKPTGEERAGQAKKPYT*QPSFFC Trigger: GCAGAAGAATGAAGGCTGCCAGGTGTACGGCTTCTT...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGTTCCCAGGGGCAAAGTaGAAGTTTCCAGCCACCTTG | + |
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Preference number: 4 (lower is better) Translates to: EERIWVVDRLEGKPTGEEFPGAK*KFPATL Trigger: CAAGGTGGCTGGAAACTTCCACTTTGCCCCTGGGAA...CTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | TATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGCCTGCATCTTCTGGCTaGAGCCCTCTCGCCGACACT | + |
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Preference number: 4 (lower is better) Translates to: YHNSYLLPWAGLAEERIWPASSG*SPLADT Trigger: AGTGTCGGCGAGAGGGCTTCAGCCAGAAGATGCAGG...CCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | TCCTATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATACCCTCTCGCCGACACTaGTCAATGGTGTCCGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SYHNSYLLPWAGLAEERIPSRRH*SMVSGF Trigger: GAACCCGGACACCATTGAGCAGTGTCGGCGAGAGGG...TATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR GCA 90 bp | GAGGAGAGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGCAGCCTTCATTCTTCTaGTCCTGCATCTTCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: EERIWVVDRLEGKPTGEEQPSFF*SCIFWL Trigger: CAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTG...CTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | ATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGAAAGAAGCCGTACACCTaGCAGCCTTCATTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: IWVVDRLEGKPTGEERAGKKPYT*QPSFFC Trigger: GCAGAAGAATGAAGGCTGCCAGGTGTACGGCTTCTT...TCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | AGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAAGTACTGGAACATCATaGAGGCTTGGGGTGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: RIWVVDRLEGKPTGEERASTGTS*RLGVQS Trigger: TGACTGCACCCCAAGCCTCCATGATGTTCCAGTACT...TGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | TTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGACCTTCACAAAGTACTaGAACATCATGGAGGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LTGWRVNPQGKRGQDKLWTFTKY*NIMEAW Trigger: CCAAGCCTCCATGATGTTCCAGTACTTTGTGAAGGT...CCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | GTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGTGTCTAGTCGTTTCTTaGACAGGTTGTGTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: VDRLEGKPTGEERAGQAVCLVVS*TGCVPH Trigger: ATGTGGAACACAACCTGTTCAAGAAACGACTAGACA...CACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | ATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGGCTGGTCACGGAGAACTaGTTAGTCCTCAGCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: ITIHIYCPGLGWLRRGYGLVTEN*LVLSTS Trigger: GGAGGTGCTGAGGACTAACCAGTTCTCCGTGACCAG...CCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | GAGGAGAGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGACACCTGTCAGAAAGTaGGTGAAGGACCTGTGTTTC | + |
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Preference number: 4 (lower is better) Translates to: EERIWVVDRLEGKPTGEETPVRK*VKDLCF Trigger: GAAACACAGGTCCTTCACCCACTTTCTGACAGGTGT...CTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCTCTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR TCA 90 bp | AGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCATGTCTAGTCGTTTCTTaGACAGGTTGTGTTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: RIWVVDRLEGKPTGEERACLVVS*TGCVPH Trigger: ATGTGGAACACAACCTGTTCAAGAAACGACTAGACA...TGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | TCCTATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATAAGGTCAATTTTCTTCTaGATGGCCCGAGCGGAGTGG | + |
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Preference number: 4 (lower is better) Translates to: SYHNSYLLPWAGLAEERIRSIFF*MARAEW Trigger: CCACTCCGCTCGGGCCATCCAGAAGAAAATTGACCT...TATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CCA 90 bp | TCCTATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATACAATTTTCTTCTGGATaGCCCGAGCGGAGTGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SYHNSYLLPWAGLAEERIQFSSG*PERSGR Trigger: TCTACCACTCCGCTCGGGCCATCCAGAAGAAAATTG...TATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS GCA 90 bp | CCCGGCAGGCCCTGGTCACCCAGGAGCCCATTGGCAACCTTCTCGTaGCTGGTCACGGAGAACTGGTTAGTCCTCAGCACCTCCCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGRPWSPRSPLATFS*LVTENWLVLSTSPS Trigger: GGACGGGGAGGTGCTGAGGACTAACCAGTTCTCCGTGACCAGGCACGAGAAGGTTGCCAATGGGCTCCTGGGTGACCAGGGCCTGCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000155370.2 |
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| CDS-3UTR CAA 90 bp | GACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGGCACCCCCGCAGGTCTaGACCCGGAAGTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: DRLEGKPTGEERAGQAVGAPPQV*TRKSSR Trigger: TCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGTGC...CCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | TGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGCAGCTCTCACAGCGATaGGGGTCCAAGGAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRVNPQGKRGQDKLWGREQLSQR*GSKELG Trigger: CCCCAACTCCTTGGACCCCAATCGCTGTGAGAGCTG...CTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | AGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGAGAATGGTGTCCGGGTTCTaGAAGGCCCAGCCTCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: RVNPQGKRGQDKLWGRERMVSGF*KAQPRR Trigger: CCGTCGAGGCTGGGCCTTCAAGAACCCGGACACCAT...TCTCTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | AGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTGTGGGGAAGGGAGAGACAGCTCTCACAGCGATaGGGGTCCAAGGAGTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVNPQGKRGQDKLWGRERQLSQR*GSKELG Trigger: CCCCAACTCCTTGGACCCCAATCGCTGTGAGAGCTG...TCTCTCCCTTCCCCACAGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS TCA 90 bp | CAGCCTCTGAGCTCACGGGGACGCCATCCTTGTCTAGTCGTTTCTTaGACAGGTTGTGTTCCACATCCAGCTGCTGCTCCCCGGCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: QPLSSRGRHPCLVVS*TGCVPHPAAAPRPR Trigger: ACGTGGCCGGGGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTCAGAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS-3UTR CAA 90 bp | TGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAATGGGGTGCAGTCACGTaGGTGTGGTCTAGGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WVVDRLEGKPTGEERAGQWGAVT*VWSRGF Trigger: GAACCCCCTAGACCACACCAACGTGACTGCACCCCA...TTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTTGGGGTGCAGTCACGTaGGTGTGGTCTAGGGGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VVDRLEGKPTGEERAGQAWGAVT*VWSRGF Trigger: GAACCCCCTAGACCACACCAACGTGACTGCACCCCA...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS TCA 90 bp | GTGGGTGAAGGACCTGTGTTTCTCCGTCAGCTTCACCATCATTGGTaGGAGCTCATACAGCACAAAGACCCCCGGCAGGCCCTGGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VGEGPVFLRQLHHHW*ELIQHKDPRQALVT Trigger: GGTGACCAGGGCCTGCCGGGGGTCTTTGTGCTGTATGAGCTCTCACCAATGATGGTGAAGCTGACGGAGAAACACAGGTCCTTCACCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000155370.2 |
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| CDS CCA 90 bp | ACTCAGCGCCGTAGCAGCTCTCACAGCGATTGGGGTCCAAGGAGTTaGGGTCAAACACTGTCACCTCGACTTTCCCAAGCTCGTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: TQRRSSSHSDWGPRS*GQTLSPRLSQARAV Trigger: AACGGCACGAGCTTGGGAAAGTCGAGGTGACAGTGTTTGACCCCAACTCCTTGGACCCCAATCGCTGTGAGAGCTGCTACGGCGCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS-3UTR CAA 90 bp | TCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGGTAGTTGACGCACCCCCGCAGGTCTaGACCCGGAAGTCCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SYLLPWAGLAEERIWVVDAPPQV*TRKSSR Trigger: TCTGGAGGACTTCCGGGTCAAGACCTGCGGGGGTGC...GTCAACTACCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS GCA 90 bp | TTGTTGACCTCCAAGAAGCCGTACACCTGGCAGCCTTCATTCTTCTaGTCCTGCATCTTCTGGCTGAAGCCCTCTCGCCGACACTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LLTSKKPYTWQPSFF*SCIFWLKPSRRHCS Trigger: TGAGCAGTGTCGGCGAGAGGGCTTCAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTGCCAGGTGTACGGCTTCTTGGAGGTCAACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 ENSMUST00000155370.2 |
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| CDS-3UTR CAA 90 bp | ATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGGATGGTGTCCGGGTTCTaGAAGGCCCAGCCTCGACGG | + |
|
Preference number: 5 (lower is better) Translates to: ITIHIYCPGLGWLRRGYGMVSGF*KAQPRR Trigger: CCGTCGAGGCTGGGCCTTCAAGAACCCGGACACCAT...CCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS CCA 90 bp | TGGAAGTTTCCAGCCACCTTGTTGACCTCCAAGAAGCCGTACACCTaGCAGCCTTCATTCTTCTGCTCCTGCATCTTCTGGCTGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: WKFPATLLTSKKPYT*QPSFFCSCIFWLKP Trigger: GGGCTTCAGCCAGAAGATGCAGGAGCAGAAGAATGAAGGCTGCCAGGTGTACGGCTTCTTGGAGGTCAACAAGGTGGCTGGAAACTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 ENSMUST00000155370.2 |
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| CDS-3UTR CAA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTCGTTTCTTGAACAGGTaGTGTTCCACATCCAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVDRLEGKPTGEERAGQARFLNR*CSTSSC Trigger: GCAGCTGGATGTGGAACACAACCTGTTCAAGAAACG...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | TCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGGTAGTTGACTTGGGGTCCAAGGAGTaGGGGTCAAACACTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: SYLLPWAGLAEERIWVVDLGSKE*GSNTVT Trigger: GGTGACAGTGTTTGACCCCAACTCCTTGGACCCCAA...GTCAACTACCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTTCAGCTTCACCATCATaGGTGAGAGCTCATACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VVDRLEGKPTGEERAGQASASPS*VRAHTA Trigger: TGCTGTATGAGCTCTCACCAATGATGGTGAAGCTGA...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | ATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGGTTGGGGTCCAAGGAGTaGGGGTCAAACACTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: ITIHIYCPGLGWLRRGYGLGSKE*GSNTVT Trigger: GGTGACAGTGTTTGACCCCAACTCCTTGGACCCCAA...CCCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | AGGATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCACAACTGTTACAGCACTaGATGTCTTCTGACTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: RIWVVDRLEGKPTGEERAQLLQH*MSSDSA Trigger: CGCTGAGTCAGAAGACATCAAGTGCTGTAACAGTTG...TGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | ATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAACTGTTACAGCACTaGATGTCTTCTGACTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IWVVDRLEGKPTGEERAGQLLQH*MSSDSA Trigger: CGCTGAGTCAGAAGACATCAAGTGCTGTAACAGTTG...TCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | GTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAGCTTGTGTCATGTTGATATaGTCAAGGCCAAAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VVDRLEGKPTGEERAGQACVMLI*SRPKLC Trigger: GCAGAGCTTTGGCCTTGACAATATCAACATGACACA...AGCTTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006035.13 |
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| CDS-3UTR CAA 90 bp | ATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGAAAGCAATCAGATGGATaGTCAAGGCCAAAGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IWVVDRLEGKPTGEERAGKQSDG*SRPKLC Trigger: GCAGAGCTTTGGCCTTGACAATCCATCTGATTGCTT...TCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | TGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGACAAAAAAGAACATCGATGTaGATCTTCAGTTTATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: WVVDRLEGKPTGEERAGQKRTSM*IFSLSP Trigger: GGGGGATAAACTGAAGATCAACATCGATGTTCTTTT...TTGTCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCA 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | ATATGGGTAGTTGACAGGCTGGAGGGTAAACCCACAGGGGAAGAGAGGGCAGGATTGTCTAGTCGTTTCTaGAACAGGTTGTGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: IWVVDRLEGKPTGEERAGLSSRF*NRLCST Trigger: TGTGGAACACAACCTGTTCAAGAAACGACTAGACAA...TCCTGCCCTCTCTTCCCCTGTGGGTTTACCCTCCAGCCTGTCAACTACCCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | TATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATGGTCAGCTTCACCATCATaGGTGAGAGCTCATACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YHNSYLLPWAGLAEERIWSASPS*VRAHTA Trigger: TGCTGTATGAGCTCTCACCAATGATGGTGAAGCTGA...CCATATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | TCCTATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATATTGTCTAGTCGTTTCTaGAACAGGTTGTGTTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: SYHNSYLLPWAGLAEERILSSRF*NRLCST Trigger: TGTGGAACACAACCTGTTCAAGAAACGACTAGACAA...TATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS-3UTR CAA 90 bp | TCCTATCACAATTCATATTTATTGCCCTGGGCTGGGCTGGCTGAGGAGAGGATAAAAAGAACATCGATGTaGATCTTCAGTTTATCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SYHNSYLLPWAGLAEERIKRTSM*IFSLSP Trigger: GGGGGATAAACTGAAGATCAACATCGATGTTCTTTT...TATCCTCTCCTCAGCCAGCCCAGCCCAGGGCAATAAATATGAATTGTGATAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 |
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| CDS TCA 72 bp | CCTCTCGCCGACACTGCTCAATGGTGTCCGGGTTCTTaGAGGCCCAGCCTCGACGGCGATAGGCCTCCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: PLADTAQWCPGS*RPSLDGDRPPA Trigger: TGCGGGAGGCCTATCGCCGTCGAGGCTGGGCCTTCAAGAACCCGGACACCATTGAGCAGTGTCGGCGAGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 ENSMUST00000155370.2 |
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| CDS CCA 72 bp | GAGAGCTCATACAGCACAAAGACCCCCGGCAGGCCCTaGTCACCCAGGAGCCCATTGGCAACCTTCTCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ESSYSTKTPGRP*SPRSPLATFSC Trigger: GCACGAGAAGGTTGCCAATGGGCTCCTGGGTGACCAGGGCCTGCCGGGGGTCTTTGTGCTGTATGAGCTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000155370.2 |
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| CDS GCA 72 bp | CCCTGGTCACCCAGGAGCCCATTGGCAACCTTCTCGTaGCTGGTCACGGAGAACTGGTTAGTCCTCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PWSPRSPLATFS*LVTENWLVLST Trigger: GGTGCTGAGGACTAACCAGTTCTCCGTGACCAGGCACGAGAAGGTTGCCAATGGGCTCCTGGGTGACCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000155370.2 |
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| CDS CAA 90 bp | GAGCTCACGGGGACGCCATCCTTGTCTAGTCGTTTCTTGAACAGGTaGTGTTCCACATCCAGCTGCTGCTCCCCGGCCACGTCCATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ELTGTPSLSSRFLNR*CSTSSCCSPATSMA Trigger: TGCCATGGACGTGGCCGGGGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS CAA 90 bp | TCAGCCTCTGAGCTCACGGGGACGCCATCCTTGTCTAGTCGTTTCTaGAACAGGTTGTGTTCCACATCCAGCTGCTGCTCCCCGGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: SASELTGTPSLSSRF*NRLCSTSSCCSPAT Trigger: CGTGGCCGGGGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTCAGAGGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS CCA 72 bp | CCATTGGCAACCTTCTCGTGCCTGGTCACGGAGAACTaGTTAGTCCTCAGCACCTCCCCGTCCACCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PLATFSCLVTEN*LVLSTSPSTFM Trigger: CATGAAGGTGGACGGGGAGGTGCTGAGGACTAACCAGTTCTCCGTGACCAGGCACGAGAAGGTTGCCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 ENSMUST00000155370.2 |
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| CDS CAA 90 bp | CCAAGCTCGTGCCGTTCAGCCTCTGAGCTCACGGGGACGCCATCCTaGTCTAGTCGTTTCTTGAACAGGTTGTGTTCCACATCCAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PSSCRSASELTGTPS*SSRFLNRLCSTSSC Trigger: GCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTCAGAGGCTGAACGGCACGAGCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS TCA 72 bp | GGACCTGTGTTTCTCCGTCAGCTTCACCATCATTGGTaGGAGCTCATACAGCACAAAGACCCCCGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GPVFLRQLHHHW*ELIQHKDPRQA Trigger: GGCCTGCCGGGGGTCTTTGTGCTGTATGAGCTCTCACCAATGATGGTGAAGCTGACGGAGAAACACAGGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000155370.2 |
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| CDS GCA 72 bp | CGTTTCTTGAACAGGTTGTGTTCCACATCCAGCTGCTaGTCCCCGGCCACGTCCATGGCATCGATGCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: RFLNRLCSTSSC*SPATSMASMLK Trigger: CTTGAGCATCGATGCCATGGACGTGGCCGGGGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS GCA 72 bp | AGTCGTTTCTTGAACAGGTTGTGTTCCACATCCAGCTaGTGCTCCCCGGCCACGTCCATGGCATCGATGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SRFLNRLCSTSS*CSPATSMASML Trigger: GAGCATCGATGCCATGGACGTGGCCGGGGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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| CDS CCA 72 bp | CTTCTGACTCAGCGCCGTAGCAGCTCTCACAGCGATTaGGGTCCAAGGAGTTGGGGTCAAACACTGTCACCT | + |
|
Preference number: 6 (lower is better) Translates to: LLTQRRSSSHSD*GPRSWGQTLSP Trigger: AGGTGACAGTGTTTGACCCCAACTCCTTGGACCCCAATCGCTGTGAGAGCTGCTACGGCGCTGAGTCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 ENSMUST00000155370.2 |
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| CDS TCA 72 bp | AGCTCACGGGGACGCCATCCTTGTCTAGTCGTTTCTTaGACAGGTTGTGTTCCACATCCAGCTGCTGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSRGRHPCLVVS*TGCVPHPAAAP Trigger: GGGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
||
| CDS CAA 72 bp | GAGCTCACGGGGACGCCATCCTTGTCTAGTCGTTTCTaGAACAGGTTGTGTTCCACATCCAGCTGCTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELTGTPSLSSRF*NRLCSTSSCCS Trigger: GGAGCAGCAGCTGGATGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
||
| CDS CCA 72 bp | ACTGGAACATCATGGAGGCTTGGGGTGCAGTCACGTTaGTGTGGTCTAGGGGGTTCACGATTCCTGGATAGT | + |
|
Preference number: 6 (lower is better) Translates to: TGTSWRLGVQSR*CGLGGSRFLDS Trigger: ACTATCCAGGAATCGTGAACCCCCTAGACCACACCAACGTGACTGCACCCCAAGCCTCCATGATGTTCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 ENSMUST00000155370.2 |
||
| CDS CAA 72 bp | TGCCGTTCAGCCTCTGAGCTCACGGGGACGCCATCCTaGTCTAGTCGTTTCTTGAACAGGTTGTGTTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CRSASELTGTPS*SSRFLNRLCST Trigger: TGTGGAACACAACCTGTTCAAGAAACGACTAGACAAGGATGGCGTCCCCGTGAGCTCAGAGGCTGAACGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006035.13 ENSMUST00000088650.11 ENSMUST00000142859.8 |
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