Pregenerated sensors for ERGIC2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030304Ensembl transcript IDs: ENSMUST00000032446.12, ENSMUST00000126698.2, ENSMUST00000130242.8, ENSMUST00000136008.8, ENSMUST00000143282.8, ENSMUST00000203268.2, ENSMUST00000204832.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGCTCCTTCAAGTTACCGTAGCCTCATCAGTTCTGTGCAGAGCCTaGGGGCAGCACCTGTCCAGGGTTACAGCTGTGTCTAGGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: GLLQVTVASSVLCRA*GQHLSRVTAVSRLL Trigger: AAGCAGCCTAGACACAGCTGTAACCCTGGACAGGTGCTGCCCTCAGGCTCTGCACAGAACTGATGAGGCTACGGTAACTTGAAGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CCA 90 bp | TGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTaGGCTGACTCTCCAGTTAGCTGCATAATTTCTTCTATGACATTT | + |
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Preference number: 1 (lower is better) Translates to: CWEASEVLSSPGTVG*ADSPVSCIISSMTF Trigger: AAATGTCATAGAAGAAATTATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 ENSMUST00000204832.2 |
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| 3UTR TCA 90 bp | TTGAACTCTGGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCGGTTGATTTATTTCTTAAACCATCA | + |
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Preference number: 1 (lower is better) Translates to: LNSGPSEEQLGALTH*AISPAPVDLFLKPS Trigger: TGATGGTTTAAGAAATAAATCAACCGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCCAGAGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR GCA 90 bp | GTGAGAAAAGTTGTAAGAATCATGGTTGACAAGTGCTGCCAAATGTaGATGCCCTCGAGGATGTGGGATTGCCTTGCCCACAGTTATGTG | + |
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Preference number: 1 (lower is better) Translates to: VRKVVRIMVDKCCQM*MPSRMWDCLAHSYV Trigger: CACATAACTGTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAACCATGATTCTTACAACTTTTCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR GCA 90 bp | ATCTATTCTGTGAGAAAAGTTGTAAGAATCATGGTTGACAAGTGCTaGCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCAC | + |
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Preference number: 1 (lower is better) Translates to: IYSVRKVVRIMVDKC*QMCMPSRMWDCLAH Trigger: GTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAACCATGATTCTTACAACTTTTCTCACAGAATAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR GCA 90 bp | ACTGAGATCATATTTCATAAATATTCCAGAGACGCCGTGGCTGCCTaGAGCATGGTTGATGATGCGTTCCCTTTCTGTCACAGAGAACTG | + |
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Preference number: 1 (lower is better) Translates to: TEIIFHKYSRDAVAA*SMVDDAFPFCHREL Trigger: CAGTTCTCTGTGACAGAAAGGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATATGATCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR GCA 90 bp | CAACCTTCAACAGTCAGGAAAGTCAGCAACTGGAGTTCAAAGGAATaGAGTGACCTTCATCAGAACCCCAAACTGGACAACACCATCTTG | + |
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Preference number: 1 (lower is better) Translates to: QPSTVRKVSNWSSKE*SDLHQNPKLDNTIL Trigger: CAAGATGGTGTTGTCCAGTTTGGGGTTCTGATGAAGGTCACTGCATTCCTTTGAACTCCAGTTGCTGACTTTCCTGACTGTTGAAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CCA 90 bp | CAAACAGTGCTGGTTCATAAGCCAGACCATCTGCAGAAGCAACCATaGTCTCTGCTAAATCCAGTACATCTGCTCCAACATAGTGACACT | + |
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Preference number: 1 (lower is better) Translates to: QTVLVHKPDHLQKQP*SLLNPVHLLQHSDT Trigger: AGTGTCACTATGTTGGAGCAGATGTACTGGATTTAGCAGAGACCATGGTTGCTTCTGCAGATGGTCTGGCTTATGAACCAGCACTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR TCA 90 bp | TTTATGCTTTCTTCTCCCTGCAGTGTCCCTTGTTCAAGCTGTGAGTaGCACCTGTTACACATCATAGCAAGTATATACCTGGGCCTTAGG | + |
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Preference number: 1 (lower is better) Translates to: FMLSSPCSVPCSSCE*HLLHIIASIYLGLR Trigger: CCTAAGGCCCAGGTATATACTTGCTATGATGTGTAACAGGTGTCACTCACAGCTTGAACAAGGGACACTGCAGGGAGAAGAAAGCATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR GCA 90 bp | TCGAGGATGTGGGATTGCCTTGCCCACAGTTATGTGAAAATTCCCTaGTACTTTATTGACATAGAGATGACCATGGATTCTGCACGCATC | + |
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Preference number: 1 (lower is better) Translates to: SRMWDCLAHSYVKIP*YFIDIEMTMDSARI Trigger: GATGCGTGCAGAATCCATGGTCATCTCTATGTCAATAAAGTAGCAGGGAATTTTCACATAACTGTGGGCAAGGCAATCCCACATCCTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR CCA 90 bp | ATGAGAGAACTGAGATCATATTTCATAAATATTCCAGAGACGCCGTaGCTGCCTGCAGCATGGTTGATGATGCGTTCCCTTTCTGTCACA | + |
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Preference number: 1 (lower is better) Translates to: MRELRSYFINIPETP*LPAAWLMMRSLSVT Trigger: TGTGACAGAAAGGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATATGATCTCAGTTCTCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR TCA 90 bp | AACATTTATGCTTTCTTCTCCCTGCAGTGTCCCTTGTTCAAGCTGTaGGTGACACCTGTTACACATCATAGCAAGTATATACCTGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: NIYAFFSLQCPLFKL*VTPVTHHSKYIPGP Trigger: AGGCCCAGGTATATACTTGCTATGATGTGTAACAGGTGTCACTCACAGCTTGAACAAGGGACACTGCAGGGAGAAGAAAGCATAAATGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR GCA 90 bp | CTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTaGATAATTTCTTCTATGACATTTGTAACAGACACAACATATACA | + |
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Preference number: 1 (lower is better) Translates to: LSSPGTVGWADSPVS*IISSMTFVTDTTYT Trigger: TGTATATGTTGTGTCTGTTACAAATGTCATAGAAGAAATTATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 ENSMUST00000204832.2 |
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| 3UTR CCA 90 bp | GACCTTCATCAGAACCCCAAACTGGACAACACCATCTTGTCAATATaGCTTAATATTAATATGGCTGTAACACAGGGCCAGTCCCTGTTT | + |
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Preference number: 1 (lower is better) Translates to: DLHQNPKLDNTILSI*LNINMAVTQGQSLF Trigger: AAACAGGGACTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACAAGATGGTGTTGTCCAGTTTGGGGTTCTGATGAAGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR TCA 90 bp | CGCACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTTaGCGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCT | + |
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Preference number: 1 (lower is better) Translates to: RTHLHLSMPFSLNSG*RPSSRICFPYCLFA Trigger: AGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTCAACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| 3UTR CCA 90 bp | ACTGGAGTTCAAAGGAATGCAGTGACCTTCATCAGAACCCCAAACTaGACAACACCATCTTGTCAATATGGCTTAATATTAATATGGCTG | + |
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Preference number: 1 (lower is better) Translates to: TGVQRNAVTFIRTPN*TTPSCQYGLILIWL Trigger: CAGCCATATTAATATTAAGCCATATTGACAAGATGGTGTTGTCCAGTTTGGGGTTCTGATGAAGGTCACTGCATTCCTTTGAACTCCAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCTGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCACAGTCTCTGCCACTCTCTCTaGTGGGGTGAAAGGTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: KCCQMCMPSRMWDCLAHSLCHSL*WGERSN Trigger: GTTTGACCTTTCACCCCAGCAGAGAGAGTGGCAGAG...ACTGTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGATGACCATGGATTCTaGACGCATCTGGAGTCAGTG | + |
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Preference number: 2 (lower is better) Translates to: SVCWEASEVLSSPGTVGWDDHGF*THLESV Trigger: CACTGACTCCAGATGCGTGCAGAATCCATGGTCATC...CCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR CAA 90 bp | CGGGTTGACGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTaGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGG | + |
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Preference number: 2 (lower is better) Translates to: RVDVHPLGSAFHIVC*LGGIRGAVFTWHCW Trigger: CCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTCAACCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCACAGTTCCACTCTGGGTCCTGTaGGACTCAGAAGACTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SAAKCACPRGCGIALPTVPLWVL*DSEDFL Trigger: AAGAAAGTCTTCTGAGTCTCACAGGACCCAGAGTGG...AACTGTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130242.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCACACTCGAAGCCACCACTGTCCTGTGTCTGGTAGGGACTGAAACTCAGCCCTTGTTCAAGCTGTaGGTGACACCTGTTACACAT | + |
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Preference number: 2 (lower is better) Translates to: QATLEATTVLCLVGTETQPLFKL*VTPVTH Trigger: ATGTGTAACAGGTGTCACTCACAGCTTGAACAAGGG...CTGAGTTTCAGTCCCTACCAGACACAGGACAGTGGTGGCTTCGAGTGTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGATTCTGCACGCATCTGGAGTCAGTGATGAATCATCTTCCCTTGGTGGCAAGCTGCAGCATCCTCTaGCACTCTCTCTGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: HGFCTHLESVMNHLPLVASCSIL*HSLCWG Trigger: ACCCCAGCAGAGAGAGTGGCAGAGGATGCTGCAGCT...TGCCACCAAGGGAAGATGATTCATCACTGACTCCAGATGCGTGCAGAATCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCACACTCGAAGCCACCACTGTCCTGTGTCTGGTAGGGACTGAAACTCAGCAGCTGTGTCTAGGCTaGTTCAGACTTCAGTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: QATLEATTVLCLVGTETQQLCLG*FRLQSC Trigger: ACAAGACTGAAGTCTGAAGCAGCCTAGACACAGCTG...CTGAGTTTCAGTCCCTACCAGACACAGGACAGTGGTGGCTTCGAGTGTGGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR CCA 90 bp | CCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGAAGTGGTTGTCTGTGTaGCCATCCGCAAAGGGGACA | + |
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Preference number: 2 (lower is better) Translates to: PYCLFAGRHQRCCLHLALKWLSV*PSAKGT Trigger: TGTCCCCTTTGCGGATGGCCACACAGACAACCACTT...CAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000204832.2 |
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| 3UTR-3UTR TCA 90 bp | GACAAGTGCTGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCACTGGTGGCAGTGCAGTTaGTGCACTTTTAAAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: DKCCQMCMPSRMWDCLAHWWQCS*CTFKST Trigger: AGTGCTTTTAAAAGTGCATCAACTGCACTGCCACCA...GTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGATGGTTGACAAGTGCTaGCAAATGTGCATGCCCTCG | + |
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Preference number: 2 (lower is better) Translates to: IVCLLGGIRGAVFTWHCWMVDKC*QMCMPS Trigger: CGAGGGCATGCACATTTGGCAGCACTTGTCAACCAT...CCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR CAA 90 bp | CTGTCCAGGGTTACAGCTGTGTCTAGGCTGCTTCAGACTTCAGTCTaGTATGGACACTGCCTTGCCTGTCTCAGATGTCCAGTTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LSRVTAVSRLLQTSV*YGHCLACLRCPVFH Trigger: GTGGAAAACTGGACATCTGAGACAGGCAAGGCAGTGTCCATACAAGACTGAAGTCTGAAGCAGCCTAGACACAGCTGTAACCCTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR GCA 90 bp | CATGGATTCTGCACGCATCTGGAGTCAGTGATGAATCATCTTCCCTTGGTGGCAGCTGCCAAATGTGCATaGCCTCGAGGATGTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: HGFCTHLESVMNHLPLVAAAKCA*PRGCGI Trigger: AATCCCACATCCTCGAGGGCATGCACATTTGGCAGC...TGCCACCAAGGGAAGATGATTCATCACTGACTCCAGATGCGTGCAGAATCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTCCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGATAAGCCAGACCATCTaGAGAAGCAACCATGGTCTC | + |
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Preference number: 2 (lower is better) Translates to: AFHIVCLLGGIRGAVFTWISQTI*RSNHGL Trigger: GAGACCATGGTTGCTTCTGCAGATGGTCTGGCTTAT...CCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR-3UTR GCA 90 bp | CGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCAGGTATGGACACTGCCTTaGCTGTCTCAGATGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: RPSSRICFPYCLFAGRHQVWTLP*LSQMSS Trigger: ACTGGACATCTGAGACAGGCAAGGCAGTGTCCATAC...CTGATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR CCA 90 bp | TCATGGTTGACAAGTGCTGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCCTGCAGAAGCAACCATaGTCTCTGCTAAATCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: SWLTSAAKCACPRGCGIALQKQP*SLLNPV Trigger: TACTGGATTTAGCAGAGACCATGGTTGCTTCTGCAG...GGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAACCATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR-3UTR TCA 90 bp | TTGACAAGTGCTGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCTTGCCCACAGTTATGTaGAAATTCCCTGCTACTTTA | + |
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Preference number: 2 (lower is better) Translates to: LTSAAKCACPRGCGIALPLPTVM*KFPATL Trigger: TAAAGTAGCAGGGAATTTTCACATAACTGTGGGCAA...GGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR-3UTR TCA 90 bp | GACGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCTGGTGGCAGTGCAGTTaGTGCACTTTTAAAAGCACT | + |
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Preference number: 2 (lower is better) Translates to: DVHPLGSAFHIVCLLGGIWWQCS*CTFKST Trigger: AGTGCTTTTAAAAGTGCATCAACTGCACTGCCACCA...GATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR-3UTR TCA 90 bp | CCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGCCCACAGTTATGTaGAAATTCCCTGCTACTTTA | + |
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Preference number: 2 (lower is better) Translates to: PYCLFAGRHQRCCLHLALLPTVM*KFPATL Trigger: TAAAGTAGCAGGGAATTTTCACATAACTGTGGGCAA...CAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR-3UTR TCA 90 bp | CGGGTTGACGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGATTCAAAGGAATGCAGTaGCCTTCATCAGAACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: RVDVHPLGSAFHIVCLLGFKGMQ*PSSEPQ Trigger: TTGGGGTTCTGATGAAGGTCACTGCATTCCTTTGAA...TCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTCAACCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR GCA 90 bp | TTCATAAATATTCCAGAGACGCCGTGGCTGCCTGCAGCATGGTTGATGATGCGTGATGTGGGATTGCCTTaGCCACAGTTATGTGAAAAT | + |
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Preference number: 2 (lower is better) Translates to: FINIPETPWLPAAWLMMRDVGLP*PQLCEN Trigger: ATTTTCACATAACTGTGGGCAAGGCAATCCCACATC...ACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR CAA 90 bp | GAATGCAGTGACCTTCATCAGAACCCCAAACTGGACAACACCATCTaGTCAATATGGCTTAATATTAATATGGCTGTAACACAGGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: ECSDLHQNPKLDNTI*SIWLNINMAVTQGQ Trigger: CTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACAAGATGGTGTTGTCCAGTTTGGGGTTCTGATGAAGGTCACTGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CAA 90 bp | GTAAGTAGACATGAAGAGCAACATTCAGTCTCAAGTGACCAGTTCTaGCTAACAAAATTCTGGAGAGCTGTCCCGTTTCTAGACAAACTA | + |
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Preference number: 2 (lower is better) Translates to: VSRHEEQHSVSSDQF*LTKFWRAVPFLDKL Trigger: TAGTTTGTCTAGAAACGGGACAGCTCTCCAGAATTTTGTTAGCAAGAACTGGTCACTTGAGACTGAATGTTGCTCTTCATGTCTACTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTAATGTCTATGTTGATTCGCAACTTGCTAGAAAAATCCTTGTCTACTTCATGCCACTCTCTCTGCTaGGGTGAAAGGTCAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: TVMSMLIRNLLEKSLSTSCHSLC*GERSNS Trigger: ACTGTTTGACCTTTCACCCCAGCAGAGAGAGTGGCA...TGAAGTAGACAAGGATTTTTCTAGCAAGTTGCGAATCAACATAGACATTACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130242.8 |
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| 3UTR-3UTR GCA 90 bp | CATTATTCATCTAAGTTGAGAACAAGTGGATCTGCAGTTCTAATATTGAGCCAGTGGAGTTCAAAGGAATaGAGTGACCTTCATCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: HYSSKLRTSGSAVLILSQWSSKE*SDLHQN Trigger: GTTCTGATGAAGGTCACTGCATTCCTTTGAACTCCA...CTGGCTCAATATTAGAACTGCAGATCCACTTGTTCTCAACTTAGATGAATAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR-3UTR TCA 90 bp | AATAATTCCCGGAACAAGCTCTCCAAAAGACAAATGATCTATTCTGTGAGAAAATCCCTGCTACTTTATTaGCATAGAGATGACCATGGA | + |
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Preference number: 2 (lower is better) Translates to: NNSRNKLSKRQMIYSVRKSLLLY*HRDDHG Trigger: TCCATGGTCATCTCTATGTCAATAAAGTAGCAGGGA...TTTTCTCACAGAATAGATCATTTGTCTTTTGGAGAGCTTGTTCCGGGAATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| 3UTR TCA 72 bp | GGACCTTCGGAAGAGCAGTTGGGTGCTCTTACCCACTaGGCCATCTCACCAGCCCCGGTTGATTTATTTCTT | + |
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Preference number: 3 (lower is better) Translates to: GPSEEQLGALTH*AISPAPVDLFL Trigger: AAGAAATAAATCAACCGGGGCTGGTGAGATGGCTCAGTGGGTAAGAGCACCCAACTGCTCTTCCGAAGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR GCA 72 bp | GTTGTAAGAATCATGGTTGACAAGTGCTGCCAAATGTaGATGCCCTCGAGGATGTGGGATTGCCTTGCCCAC | + |
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Preference number: 3 (lower is better) Translates to: VVRIMVDKCCQM*MPSRMWDCLAH Trigger: GTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAACCATGATTCTTACAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
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| 3UTR CCA 72 bp | GCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTaGGCTGACTCTCCAGTTAGCTGCATAATTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: ASEVLSSPGTVG*ADSPVSCIISS Trigger: AGAAGAAATTATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 ENSMUST00000204832.2 |
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| 3UTR TCA 72 bp | GAACGCTGTGTAGCTGGCAGGTCAGTGAGAAATTTCTaGCCTGGAAAGGAAACCCTAGTGAGGACACACGTT | + |
|
Preference number: 3 (lower is better) Translates to: ERCVAGRSVRNF*PGKETLVRTHV Trigger: AACGTGTGTCCTCACTAGGGTTTCCTTTCCAGGTCAGAAATTTCTCACTGACCTGCCAGCTACACAGCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CCA 72 bp | ATAAATATTCCAGAGACGCCGTGGCTGCCTGCAGCATaGTTGATGATGCGTTCCCTTTCTGTCACAGAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: INIPETPWLPAA*LMMRSLSVTEN Trigger: GTTCTCTGTGACAGAAAGGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
||
| 3UTR GCA 72 bp | TCTAGGCTGCTTCAGACTTCAGTCTTGTATGGACACTaGCTTGCCTGTCTCAGATGTCCAGTTTTCCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: SRLLQTSVLYGH*LACLRCPVFHY Trigger: GTAGTGGAAAACTGGACATCTGAGACAGGCAAGGCAGTGTCCATACAAGACTGAAGTCTGAAGCAGCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCACAGTTATGTGATGTTGATTCGCAACTaGCTAGAAAAATCCTTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: CQMCMPSRMWDCLAHSYVMLIRN*LEKSLS Trigger: AGACAAGGATTTTTCTAGCAAGTTGCGAATCAACAT...CACATAACTGTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130242.8 |
||
| 3UTR GCA 72 bp | GTGAGAAAAGTTGTAAGAATCATGGTTGACAAGTGCTaGCAAATGTGCATGCCCTCGAGGATGTGGGATTGC | + |
|
Preference number: 3 (lower is better) Translates to: VRKVVRIMVDKC*QMCMPSRMWDC Trigger: GCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAACCATGATTCTTACAACTTTTCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
||
| 3UTR GCA 72 bp | ATATTTCATAAATATTCCAGAGACGCCGTGGCTGCCTaGAGCATGGTTGATGATGCGTTCCCTTTCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: IFHKYSRDAVAA*SMVDDAFPFCH Trigger: GTGACAGAAAGGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
||
| 3UTR GCA 72 bp | ACAGTCAGGAAAGTCAGCAACTGGAGTTCAAAGGAATaGAGTGACCTTCATCAGAACCCCAAACTGGACAAC | + |
|
Preference number: 3 (lower is better) Translates to: TVRKVSNWSSKE*SDLHQNPKLDN Trigger: GTTGTCCAGTTTGGGGTTCTGATGAAGGTCACTGCATTCCTTTGAACTCCAGTTGCTGACTTTCCTGACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR GCA 72 bp | GCTGCTTCAGACTTCAGTCTTGTATGGACACTGCCTTaGCTGTCTCAGATGTCCAGTTTTCCACTACTCATA | + |
|
Preference number: 3 (lower is better) Translates to: AASDFSLVWTLP*LSQMSSFPLLI Trigger: TATGAGTAGTGGAAAACTGGACATCTGAGACAGGCAAGGCAGTGTCCATACAAGACTGAAGTCTGAAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CCA 72 bp | CTGAGATCATATTTCATAAATATTCCAGAGACGCCGTaGCTGCCTGCAGCATGGTTGATGATGCGTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LRSYFINIPETP*LPAAWLMMRSL Trigger: AAGGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATATGATCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
||
| 3UTR TCA 72 bp | TGGTTGATGATGCGTTCCCTTTCTGTCACAGAGAACTaGTGGGTATCTGCTGAGATCTTGTATGTGTGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: WLMMRSLSVTEN*WVSAEILYVCS Trigger: GCTACACACATACAAGATCTCAGCAGATACCCATCAGTTCTCTGTGACAGAAAGGGAACGCATCATCAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
||
| 3UTR TCA 72 bp | TCTTCTCCCTGCAGTGTCCCTTGTTCAAGCTGTGAGTaGCACCTGTTACACATCATAGCAAGTATATACCTG | + |
|
Preference number: 3 (lower is better) Translates to: SSPCSVPCSSCE*HLLHIIASIYL Trigger: CAGGTATATACTTGCTATGATGTGTAACAGGTGTCACTCACAGCTTGAACAAGGGACACTGCAGGGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR GCA 72 bp | TCTGTGAGAAAAGTTGTAAGAATCATGGTTGACAAGTaGTGCCAAATGTGCATGCCCTCGAGGATGTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: SVRKVVRIMVDK*CQMCMPSRMWD Trigger: ATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTCAACCATGATTCTTACAACTTTTCTCACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
||
| 3UTR GCA 72 bp | CCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTaGATAATTTCTTCTATGACATTTGTAACAGACACA | + |
|
Preference number: 3 (lower is better) Translates to: PGTVGWADSPVS*IISSMTFVTDT Trigger: TGTGTCTGTTACAAATGTCATAGAAGAAATTATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 ENSMUST00000204832.2 |
||
| 3UTR GCA 72 bp | CTGACCTGGAAAGGAAACCCTAGTGAGGACACACGTTaGCTTCATCACCCAAACAGATGGTTAACATTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LTWKGNPSEDTR*LHHPNRWLTFS Trigger: TGAAAATGTTAACCATCTGTTTGGGTGATGAAGGCAACGTGTGTCCTCACTAGGGTTTCCTTTCCAGGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR TCA 72 bp | GCTTTCTTCTCCCTGCAGTGTCCCTTGTTCAAGCTGTaGGTGACACCTGTTACACATCATAGCAAGTATATA | + |
|
Preference number: 3 (lower is better) Translates to: AFFSLQCPLFKL*VTPVTHHSKYI Trigger: TATATACTTGCTATGATGTGTAACAGGTGTCACTCACAGCTTGAACAAGGGACACTGCAGGGAGAAGAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CCA 72 bp | CAGAACCCCAAACTGGACAACACCATCTTGTCAATATaGCTTAATATTAATATGGCTGTAACACAGGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QNPKLDNTILSI*LNINMAVTQGQ Trigger: CTGGCCCTGTGTTACAGCCATATTAATATTAAGCCATATTGACAAGATGGTGTTGTCCAGTTTGGGGTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR TCA 72 bp | GACTTAACCTTTATCTTTCAAAAAGACAGAATGAAATaGGGCTGGCACACATACTCAGCAGTTCCTAGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: DLTFIFQKDRMK*GWHTYSAVPSS Trigger: ACTGCTAGGAACTGCTGAGTATGTGTGCCAGCCTCATTTCATTCTGTCTTTTTGAAAGATAAAGGTTAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CCA 72 bp | CAAAGGAATGCAGTGACCTTCATCAGAACCCCAAACTaGACAACACCATCTTGTCAATATGGCTTAATATTA | + |
|
Preference number: 3 (lower is better) Translates to: QRNAVTFIRTPN*TTPSCQYGLIL Trigger: TAATATTAAGCCATATTGACAAGATGGTGTTGTCCAGTTTGGGGTTCTGATGAAGGTCACTGCATTCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR-3UTR CAA 90 bp | CATTATTCATCTAAGTTGAGAACAAGTGGATCTGCAGTTCTAATATTGAGCCAGGACGACTGCAGTTTGTaGTTTTCCTTGGCTGTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HYSSKLRTSGSAVLILSQDDCSL*FSLAVF Trigger: AAAAACAGCCAAGGAAAACAACAAACTGCAGTCGTC...CTGGCTCAATATTAGAACTGCAGATCCACTTGTTCTCAACTTAGATGAATAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACATTCCAGAGACGCCGTaGCTGCCTGCAGCATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CWEASEVLSSPGTVGWADIPETP*LPAAWL Trigger: CAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAAT...GTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 ENSMUST00000204832.2 |
||
| CDS-3UTR TCA 90 bp | GACAAGTGCTGCCAAATGTGCATGCCCTCGAGGATGTGGGATTGCCTTGCCCACTGTTCCCCCACTGGCTaGCGTCTCCACATAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DKCCQMCMPSRMWDCLAHCSPTG*RLHIAV Trigger: GACAGCTATGTGGAGACGTCAGCCAGTGGGGGAACA...GTGGGCAAGGCAATCCCACATCCTCGAGGGCATGCACATTTGGCAGCACTTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATGTTCCCCCACTGGCTaGCGTCTCCACATAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RCCLHLALLAGLTLQLAACSPTG*RLHIAV Trigger: GACAGCTATGTGGAGACGTCAGCCAGTGGGGGAACA...TGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATGGCTGCCTGCAGCATaGTTGATGATGCGTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RCCLHLALLAGLTLQLAAWLPAA*LMMRSC Trigger: GCAGGAACGCATCATCAACCATGCTGCAGGCAGCCA...TGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143282.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCGCTGCTAGGAGGGAGTaGAACCCTTTCTGTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SEVLSSPGTVGWADSPVSAARRE*NPFCHR Trigger: TCTGTGACAGAAAGGGTTCCACTCCCTCCTAGCAGC...GCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143282.8 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCAATGGTTGACAAGTGCTaGCAAATGTGCATGCCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCCLHLALLAGLTLQLAAMVDKC*QMCMPS Trigger: CGAGGGCATGCACATTTGGCAGCACTTGTCAACCAT...TGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATGCCACTCTCTCTGCTaGGGTGAAAGGTCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCCLHLALLAGLTLQLAACHSLC*GERSNS Trigger: ACTGTTTGACCTTTCACCCCAGCAGAGAGAGTGGCA...TGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGTCTGTCACAGAGAACTaGTGGGTATCTGCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: SVCWEASEVLSSPGTVGWSVTEN*WVSAEI Trigger: GATCTCAGCAGATACCCATCAGTTCTCTGTGACAGA...CCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCAGGGTTACAGCTGTGTCTAGGCTGCTTCAGACTTCAGTCTTGTATGGACATTCCAGAGACGCCGTaGCTGCCTGCAGCATGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: CPGLQLCLGCFRLQSCMDIPETP*LPAAWL Trigger: CAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAAT...GTCCATACAAGACTGAAGTCTGAAGCAGCCTAGACACAGCTGTAACCCTGGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR GCA 90 bp | AGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTAGCTGCAGCATCCTCTaGCACTCTCTCTGCTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RICFPYCLFAGRHQRCCLSCSIL*HSLCWG Trigger: ACCCCAGCAGAGAGAGTGGCAGAGGATGCTGCAGCT...AAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATAATCATGGTTGACAAGTaGTGCCAAATGTGCATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VLSSPGTVGWADSPVSCIIMVDK*CQMCMP Trigger: GGGCATGCACATTTGGCAGCACTTGTCAACCATGAT...TATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR CCA 90 bp | CATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGCCTGCAGCATaGTTGATGATGCGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIVCLLGGIRGAVFTWHCWLPAA*LMMRSL Trigger: AAGGGAACGCATCATCAACCATGCTGCAGGCAGCCA...ACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR CCA 90 bp | CATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTAAGTGGTTGTCTGTGTaGCCATCCGCAAAGGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HIVCLLGGIRGAVFTWHCKWLSV*PSAKGT Trigger: TGTCCCCTTTGCGGATGGCCACACAGACAACCACTT...ACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
||
| CDS-3UTR CCA 90 bp | TCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTCTAAAAGAGGTAAGTaGTTGTCTGTGTGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SEVLSSPGTVGWADSPVSSKRGK*LSVWPS Trigger: GGATGGCCACACAGACAACCACTTACCTCTTTTAGA...GCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
||
| CDS-3UTR TCA 90 bp | CCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTCTGTCACAGAGAACTaGTGGGTATCTGCTGAGATC | + |
|
Preference number: 4 (lower is better) Translates to: PYCLFAGRHQRCCLHLALSVTEN*WVSAEI Trigger: GATCTCAGCAGATACCCATCAGTTCTCTGTGACAGA...CAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
||
| CDS-3UTR GCA 90 bp | TGTCCAGGGTTACAGCTGTGTCTAGGCTGCTTCAGACTTCAGTCTTGTATGGACCTCTGCCACTCTCTCTaGTGGGGTGAAAGGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CPGLQLCLGCFRLQSCMDLCHSL*WGERSN Trigger: GTTTGACCTTTCACCCCAGCAGAGAGAGTGGCAGAG...GTCCATACAAGACTGAAGTCTGAAGCAGCCTAGACACAGCTGTAACCCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR GCA 90 bp | TCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATAATTTCTAAGTGCTGCCAAATGTaGATGCCCTCGAGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSPGTVGWADSPVSCIISKCCQM*MPSRMW Trigger: CCACATCCTCGAGGGCATGCACATTTGGCAGCACTT...AGAAATTATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CAA 72 bp | GTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTaGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHPLGSAFHIVC*LGGIRGAVFTW Trigger: CCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 ENSMUST00000143282.8 ENSMUST00000204832.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATATCCCTGCTACTTTATTaGCATAGAGATGACCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VLSSPGTVGWADSPVSCISLLLY*HRDDHG Trigger: TCCATGGTCATCTCTATGTCAATAAAGTAGCAGGGA...TATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR GCA 90 bp | GACGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCGATGACCATGGATTCTaGACGCATCTGGAGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DVHPLGSAFHIVCLLGGIDDHGF*THLESV Trigger: CACTGACTCCAGATGCGTGCAGAATCCATGGTCATC...GATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGATGTGGGATTGCCTTaGCCACAGTTATGTGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: HQRCCLHLALLAGLTLQLDVGLP*PQLCEN Trigger: ATTTTCACATAACTGTGGGCAAGGCAATCCCACATC...TAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR GCA 90 bp | GTATGGACACTGCCTTGCCTGTCTCAGATGTCCAGTTTTCCACTACTCATAAGCGCTGCCAAATGTGCATaGCCTCGAGGATGTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: VWTLPCLSQMSSFPLLISAAKCA*PRGCGI Trigger: AATCCCACATCCTCGAGGGCATGCACATTTGGCAGC...GCTTATGAGTAGTGGAAAACTGGACATCTGAGACAGGCAAGGCAGTGTCCATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CAA 72 bp | GTTACAGCTGTGTCTAGGCTGCTTCAGACTTCAGTCTaGTATGGACACTGCCTTGCCTGTCTCAGATGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTAVSRLLQTSV*YGHCLACLRCP Trigger: TGGACATCTGAGACAGGCAAGGCAGTGTCCATACAAGACTGAAGTCTGAAGCAGCCTAGACACAGCTGTAAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR TCA 90 bp | AGTGATGAATCATCTTCCCTTGGTGGCAGTGCAGTTGATGCACTTTTAAAAGCATGTTCCCCCACTGGCTaGCGTCTCCACATAGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SDESSSLGGSAVDALLKACSPTG*RLHIAV Trigger: GACAGCTATGTGGAGACGTCAGCCAGTGGGGGAACA...TGCTTTTAAAAGTGCATCAACTGCACTGCCACCAAGGGAAGATGATTCATCACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000130242.8 |
||
| CDS-3UTR GCA 90 bp | CGGGTTGACGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAATAAGCCAGACCATCTaGAGAAGCAACCATGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVDVHPLGSAFHIVCLLGISQTI*RSNHGL Trigger: GAGACCATGGTTGCTTCTGCAGATGGTCTGGCTTAT...TCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTCAACCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| 3UTR CAA 72 bp | GGCTGCTTCAGACTTCAGTCTTGTATGGACACTGCCTaGCCTGTCTCAGATGTCCAGTTTTCCACTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GCFRLQSCMDTA*PVSDVQFSTTH Trigger: ATGAGTAGTGGAAAACTGGACATCTGAGACAGGCAAGGCAGTGTCCATACAAGACTGAAGTCTGAAGCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATATGTAGGATCCAAGTCTaGAACGACAGCAAATTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VLSSPGTVGWADSPVSCICRIQV*NDSKLF Trigger: AAATAATTTGCTGTCGTTTCAGACTTGGATCCTACA...TATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
||
| CDS-3UTR GCA 90 bp | TCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGCAATTCCATGTAACATaGCTGTTGTTGAAAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SVCWEASEVLSSPGTVGWQFHVT*LLLKRF Trigger: GAATCTTTTCAACAACAGGCATGTTACATGGAATTG...CCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
||
| CDS-3UTR CCA 90 bp | CGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCAGCTGCAGAAGCAACCATaGTCTCTGCTAAATCCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: RPSSRICFPYCLFAGRHQLQKQP*SLLNPV Trigger: TACTGGATTTAGCAGAGACCATGGTTGCTTCTGCAG...CTGATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR TCA 90 bp | GGCTGCTTCAGACTTCAGTCTTGTATGGACACTGCCTTGCCTGTCTCAGATGTCTGGAACATCTGGTTGTaGTCTACAGCAATCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: GCFRLQSCMDTALPVSDVWNIWL*STAIFS Trigger: TGAAAAGATTGCTGTAGATCACAACCAGATGTTCCA...GACATCTGAGACAGGCAAGGCAGTGTCCATACAAGACTGAAGTCTGAAGCAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR CCA 90 bp | AGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTTCTAAAAGAGGTAAGTaGTTGTCTGTGTGGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: RICFPYCLFAGRHQRCCLSKRGK*LSVWPS Trigger: GGATGGCCACACAGACAACCACTTACCTCTTTTAGA...AAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| CDS-3UTR TCA 90 bp | ATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTTGTAGGATCCAAGTCTaGAACGACAGCAAATTATTT | + |
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Preference number: 4 (lower is better) Translates to: ILSVCWEASEVLSSPGTVCRIQV*NDSKLF Trigger: AAATAATTTGCTGTCGTTTCAGACTTGGATCCTACA...AACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| CDS-3UTR CCA 90 bp | AACAGACACAACATATACAAGACGACTGCAGTTTGTTGTTTTCCTTGGCTGTTTAAGTGGTTGTCTGTGTaGCCATCCGCAAAGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: NRHNIYKTTAVCCFPWLFKWLSV*PSAKGT Trigger: TGTCCCCTTTGCGGATGGCCACACAGACAACCACTT...AAACAGCCAAGGAAAACAACAAACTGCAGTCGTCTTGTATATGTTGTGTCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| 3UTR CAA 72 bp | AAAATGCCATTTTTCATACACTTTGCTGCTGATTTGTaGCCGTCTCCTCCTTCCCTGATGGCCTACCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: KMPFFIHFAADL*PSPPSLMAYLL Trigger: AAGAAGGTAGGCCATCAGGGAAGGAGGAGACGGCAACAAATCAGCAGCAAAGTGTATGAAAAATGGCATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CAA 72 bp | TATAAAATGCCATTTTTCATACACTTTGCTGCTGATTaGTTGCCGTCTCCTCCTTCCCTGATGGCCTACCTT | + |
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Preference number: 4 (lower is better) Translates to: YKMPFFIHFAAD*LPSPPSLMAYL Trigger: AAGGTAGGCCATCAGGGAAGGAGGAGACGGCAACAAATCAGCAGCAAAGTGTATGAAAAATGGCATTTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CAA 72 bp | CATGAAGAGCAACATTCAGTCTCAAGTGACCAGTTCTaGCTAACAAAATTCTGGAGAGCTGTCCCGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: HEEQHSVSSDQF*LTKFWRAVPFL Trigger: TAGAAACGGGACAGCTCTCCAGAATTTTGTTAGCAAGAACTGGTCACTTGAGACTGAATGTTGCTCTTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR GCA 90 bp | GTATGGACACTGCCTTGCCTGTCTCAGATGTCCAGTTTTCCACTACTCATAAGCCAATTCCATGTAACATaGCTGTTGTTGAAAAGATTC | + |
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Preference number: 4 (lower is better) Translates to: VWTLPCLSQMSSFPLLISQFHVT*LLLKRF Trigger: GAATCTTTTCAACAACAGGCATGTTACATGGAATTG...GCTTATGAGTAGTGGAAAACTGGACATCTGAGACAGGCAAGGCAGTGTCCATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CAA 72 bp | TCTAAGTTGAGAACAAGTGGATCTGCAGTTCTAATATaGAGCCAGGCTATTGCACAAGGTAGATTGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: SKLRTSGSAVLI*SQAIAQGRLNR Trigger: CCTGTTCAATCTACCTTGTGCAATAGCCTGGCTCAATATTAGAACTGCAGATCCACTTGTTCTCAACTTAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR TCA 90 bp | AAACAAAGGACGCACACATTTGCATTTATCAATGCCCTTTTCTTTAAACTCGGGTGGTGGCAGTGCAGTTaGTGCACTTTTAAAAGCACT | + |
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Preference number: 4 (lower is better) Translates to: KQRTHTFAFINALFFKLGWWQCS*CTFKST Trigger: AGTGCTTTTAAAAGTGCATCAACTGCACTGCCACCA...CCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGCGTCCTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR TCA 90 bp | AACAGACACAACATATACAAGACGACTGCAGTTTGTTGTTTTCCTTGGCTGTTTTTGCCCACAGTTATGTaGAAATTCCCTGCTACTTTA | + |
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Preference number: 4 (lower is better) Translates to: NRHNIYKTTAVCCFPWLFLPTVM*KFPATL Trigger: TAAAGTAGCAGGGAATTTTCACATAACTGTGGGCAA...AAACAGCCAAGGAAAACAACAAACTGCAGTCGTCTTGTATATGTTGTGTCTGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CAA 72 bp | GACCTTCATCAGAACCCCAAACTGGACAACACCATCTaGTCAATATGGCTTAATATTAATATGGCTGTAACA | + |
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Preference number: 4 (lower is better) Translates to: DLHQNPKLDNTI*SIWLNINMAVT Trigger: TGTTACAGCCATATTAATATTAAGCCATATTGACAAGATGGTGTTGTCCAGTTTGGGGTTCTGATGAAGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| 3UTR CAA 72 bp | TATTCTGACATCTTTAAAAACAAAGGACGCACACATTaGCATTTATCAATGCCCTTTTCTTTAAACTCGGGT | + |
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Preference number: 4 (lower is better) Translates to: YSDIFKNKGRTH*HLSMPFSLNSG Trigger: ACCCGAGTTTAAAGAAAAGGGCATTGATAAATGCAAATGTGTGCGTCCTTTGTTTTTAAAGATGTCAGAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032446.12 ENSMUST00000136008.8 |
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| 3UTR CAA 72 bp | AGAAATTATGAGAAACGTGTCCATTATTCATCTAAGTaGAGAACAAGTGGATCTGCAGTTCTAATATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: RNYEKRVHYSSK*RTSGSAVLILS Trigger: GCTCAATATTAGAACTGCAGATCCACTTGTTCTCAACTTAGATGAATAATGGACACGTTTCTCATAATTTCT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR CAA 90 bp | TGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGCATGTTGATTCGCAACTaGCTGTTCCCCCACTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CLLGGIRGAVFTWHCWLGMLIRN*LFPHWL Trigger: CAGCCAGTGGGGGAACAGCAAGTTGCGAATCAACAT...GCCCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032446.12 |
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| CDS-3UTR CAA 90 bp | ATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGAAAAGAGGTAAGTGGTaGTCTGTGTGGCCATCCGCA | + |
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Preference number: 5 (lower is better) Translates to: IVCLLGGIRGAVFTWHCWKRGKW*SVWPSA Trigger: TGCGGATGGCCACACAGACAACCACTTACCTCTTTT...CCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| CDS-3UTR CAA 90 bp | GACGTCCATCCTCTAGGATCTGCTTTCCATATTGTCTGTTTGCTGGGAGGCATCCTGCCTGCAGCATGGTaGATGATGCGTTCCCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: DVHPLGSAFHIVCLLGGILPAAW*MMRSLS Trigger: AGAAAGGGAACGCATCATCAACCATGCTGCAGGCAG...GATGCCTCCCAGCAAACAGACAATATGGAAAGCAGATCCTAGAGGATGGACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS GCA 90 bp | ACTGAGATCATATTTCATAAATATTCCAGAGACGCCGTGGCTGCCTaGAGCATGGTTGATGATGCGTTCCTGCTGAGGAAGGCTGCTAGG | + |
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Preference number: 5 (lower is better) Translates to: TEIIFHKYSRDAVAA*SMVDDAFLLRKAAR Trigger: CCTAGCAGCCTTCCTCAGCAGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATATGATCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143282.8 |
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| CDS-3UTR CAA 90 bp | TCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGGCTGGGTATCTGCTGAGATCTaGTATGTGTGTAGCTTTGTT | + |
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Preference number: 5 (lower is better) Translates to: SVCWEASEVLSSPGTVGWVSAEI*YVCSFV Trigger: AACAAAGCTACACACATACAAGATCTCAGCAGATAC...CCAGCCAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR CAA 90 bp | TTTCCATATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCAAAAAGAGGTAAGTGGTaGTCTGTGTGGCCATCCGCA | + |
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Preference number: 5 (lower is better) Translates to: FPYCLFAGRHQRCCLHLAKRGKW*SVWPSA Trigger: TGCGGATGGCCACACAGACAACCACTTACCTCTTTT...TGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATATGGAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| CDS-3UTR CAA 90 bp | TATTGTCTGTTTGCTGGGAGGCATCAGAGGTGCTGTCTTCACCTGGCACTGTTGATGTTGATTCGCAACTaGCTAGAAAAATCCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: YCLFAGRHQRCCLHLALLMLIRN*LEKSLS Trigger: AGACAAGGATTTTTCTAGCAAGTTGCGAATCAACAT...CAACAGTGCCAGGTGAAGACAGCACCTCTGATGCCTCCCAGCAAACAGACAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136008.8 |
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| CDS-3UTR CAA 90 bp | CTGTCTTCACCTGGCACTGTTGGCTGGGCTGACTCTCCAGTTAGCTGCATAATTGTAACATGCCTGTTGTaGAAAAGATTCCTCCAATTA | + |
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Preference number: 5 (lower is better) Translates to: LSSPGTVGWADSPVSCIIVTCLL*KRFLQL Trigger: TAATTGGAGGAATCTTTTCAACAACAGGCATGTTAC...AATTATGCAGCTAACTGGAGAGTCAGCCCAGCCAACAGTGCCAGGTGAAGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000136008.8 ENSMUST00000143282.8 |
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| CDS TCA 90 bp | ACAAAGTTTTTACACTTTGCACTCGAATCAAAACTATCATCGGAGTaGCACTTCATGGCAACAGTAATGTCTATGTTGATTCGCAACTTG | + |
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Preference number: 5 (lower is better) Translates to: TKFLHFALESKLSSE*HFMATVMSMLIRNL Trigger: CAAGTTGCGAATCAACATAGACATTACTGTTGCCATGAAGTGTCACTCCGATGATAGTTTTGATTCGAGTGCAAAGTGTAAAAACTTTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126698.2 |
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| CDS GCA 72 bp | ATATTTCATAAATATTCCAGAGACGCCGTGGCTGCCTaGAGCATGGTTGATGATGCGTTCCTGCTGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: IFHKYSRDAVAA*SMVDDAFLLRK Trigger: CTTCCTCAGCAGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143282.8 |
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| CDS CCA 72 bp | CTGAGATCATATTTCATAAATATTCCAGAGACGCCGTaGCTGCCTGCAGCATGGTTGATGATGCGTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRSYFINIPETP*LPAAWLMMRSC Trigger: GCAGGAACGCATCATCAACCATGCTGCAGGCAGCCACGGCGTCTCTGGAATATTTATGAAATATGATCTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143282.8 |
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| CDS CAA 72 bp | GGGTATCTGCTGAGATCTTGTATGTGTGTAGCTTTGTaGGCACAAGATCTACAGCAATCTTTTCAGTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: GYLLRSCMCVAL*AQDLQQSFQFH Trigger: ATGGAACTGAAAAGATTGCTGTAGATCTTGTGCCAACAAAGCTACACACATACAAGATCTCAGCAGATACCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000203268.2 |
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