Pregenerated sensors for EREG (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029377Ensembl transcript IDs: ENSMUST00000031324.6
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAACCTTCCAGGGATTTCCATGACTGGCTCCATGGAACATCAATaGTTGGTCCCTTGGCACTTTAGAGGCCAGAGGCAACTCCTGATC | + |
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Preference number: 1 (lower is better) Translates to: VNLPGISMTGSMEHQ*LVPWHFRGQRQLLI Trigger: GATCAGGAGTTGCCTCTGGCCTCTAAAGTGCCAAGGGACCAATCATTGATGTTCCATGGAGCCAGTCATGGAAATCCCTGGAAGGTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR GCA 90 bp | GAGCTGGTGTGTGCACAAGTTAGTGCACCAGAATGCCTTGTGCGCTaGTTATTCAATCTTTCCCTCATAGCAAGGCCAGGGCTTTGGATG | + |
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Preference number: 1 (lower is better) Translates to: ELVCAQVSAPECLVR*LFNLSLIARPGLWM Trigger: CATCCAAAGCCCTGGCCTTGCTATGAGGGAAAGATTGAATAAGCAGCGCACAAGGCATTCTGGTGCACTAACTTGTGCACACACCAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR GCA 90 bp | CTGCAAAGGCTGGAGCTGGTGTGTGCACAAGTTAGTGCACCAGAATaGCTTGTGCGCTGCTTATTCAATCTTTCCCTCATAGCAAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: LQRLELVCAQVSAPE*LVRCLFNLSLIARP Trigger: TGGCCTTGCTATGAGGGAAAGATTGAATAAGCAGCGCACAAGGCATTCTGGTGCACTAACTTGTGCACACACCAGCTCCAGCCTTTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR TCA 90 bp | TTAAACATATGCCAGGAAAAAGGTGGAGGAAGGATCGGCCCTCCCTaGCCTGGTATGTGTTCCAGGGAGATTCCACCTAAGGTTGAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LNICQEKGGGRIGPP*PGMCSREIPPKVEH Trigger: ATGCTCAACCTTAGGTGGAATCTCCCTGGAACACATACCAGGTCAGGGAGGGCCGATCCTTCCTCCACCTTTTTCCTGGCATATGTTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CCA 90 bp | GTTTTAGCCCAGTTCTTGAAAAGCTTTAAACCTTTGTCTGGAGACTaGAAACAGGTTAGTGTTTCCTTTACCCAGTTGATGTCATTGGGC | + |
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Preference number: 1 (lower is better) Translates to: VLAQFLKSFKPLSGD*KQVSVSFTQLMSLG Trigger: GCCCAATGACATCAACTGGGTAAAGGAAACACTAACCTGTTTCCAGTCTCCAGACAAAGGTTTAAAGCTTTTCAAGAACTGGGCTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 90 bp | TGTGCGCTGCTTATTCAATCTTTCCCTCATAGCAAGGCCAGGGCTTaGGATGAGAGCTGTGTGAACCTTCCAGGGATTTCCATGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: CALLIQSFPHSKARA*DESCVNLPGISMTG Trigger: GCCAGTCATGGAAATCCCTGGAAGGTTCACACAGCTCTCATCCAAAGCCCTGGCCTTGCTATGAGGGAAAGATTGAATAAGCAGCGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGCATGATGTCCTTGGTCACGGAGTGGATCTACTGGACTATGAGGTAGTCTTCCAGGGATTTCCATaGCTGGCTCCATGGAACATC | + |
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Preference number: 2 (lower is better) Translates to: TEHDVLGHGVDLLDYEVVFQGFP*LAPWNI Trigger: GATGTTCCATGGAGCCAGTCATGGAAATCCCTGGAA...GACTACCTCATAGTCCAGTAGATCCACTCCGTGACCAAGGACATCATGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGCATGATGTCCTTGGTCACGGAGTGGATCTACTGGACTATGAGGTAGTCTGGATGAGAGCTGTGTaGACCTTCCAGGGATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: TEHDVLGHGVDLLDYEVVWMRAV*TFQGFP Trigger: TGGAAATCCCTGGAAGGTTCACACAGCTCTCATCCA...GACTACCTCATAGTCCAGTAGATCCACTCCGTGACCAAGGACATCATGCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGCAACTCCTGATCTTTTTGTTACCTTAAACATATGCCAGGAAAAAGGTCGAAGACCTGCAAGCTaGGAGTGGAGGCCAGCCTTC | + |
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Preference number: 2 (lower is better) Translates to: PEATPDLFVTLNICQEKGRRPAS*EWRPAF Trigger: GAAGGCTGGCCTCCACTCTCAGCTTGCAGGTCTTCG...ACCTTTTTCCTGGCATATGTTTAAGGTAACAAAAAGATCAGGAGTTGCCTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGAGGCCAGCCTTCTGTCTTTCCACAAAGGCAAACAAAGGACGAAGAAATGCTCGCCAACCACTGTaGCAAGCCATAATTCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: EWRPAFCLSTKANKGRRNARQPL*QAIIQS Trigger: TGACTGAATTATGGCTTGGCACAGTGGTTGGCGAGC...ATTTCTTCGTCCTTTGTTTGCCTTTGTGGAAAGACAGAAGGCTGGCCTCCACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | AGATTCCACCTAAGGTTGAGCATTTGGTGGGGCAGCCTCCAGGAAAAGGTGTTCAGCAACAACCTCACATaGTATACTCTACATAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: RFHLRLSIWWGSLQEKVFSNNLT*YTLHRW Trigger: CCACCTATGTAGAGTATATCATGTGAGGTTGTTGCT...GAACACCTTTTCCTGGAGGCTGCCCCACCAAATGCTCAACCTTAGGTGGAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGCATGATGTCCTTGGTCACGGAGTGGATCTACTGGACTATGAGGTAGTCCAAAGGACGAAGAAATaGGGCAGGCTTCTCTTTAGT | + |
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Preference number: 2 (lower is better) Translates to: TEHDVLGHGVDLLDYEVVQRTKK*GRLLFS Trigger: ACTAAAGAGAAGCCTGCCCCATTTCTTCGTCCTTTG...GACTACCTCATAGTCCAGTAGATCCACTCCGTGACCAAGGACATCATGCTCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGGCAACTCCTGATCTTTTTGTTACCTTAAACATATGCCAGGAAAAAGGTCAGCCAGGCACACTGTaGATCCTTGTCCGTAACTTG | + |
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Preference number: 2 (lower is better) Translates to: PEATPDLFVTLNICQEKGQPGTL*ILVRNL Trigger: CAAGTTACGGACAAGGATTCACAGTGTGCCTGGCTG...ACCTTTTTCCTGGCATATGTTTAAGGTAACAAAAAGATCAGGAGTTGCCTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 90 bp | GGAGACTGGAAACAGGTTAGTGTTTCCTTTACCCAGTTGATGTCATaGGGCTTTCAAAATGTGTTCTCACACAGGATGCTGACTGTCCTT | + |
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Preference number: 2 (lower is better) Translates to: GDWKQVSVSFTQLMS*GFQNVFSHRMLTVL Trigger: AAGGACAGTCAGCATCCTGTGTGAGAACACATTTTGAAAGCCCAATGACATCAACTGGGTAAAGGAAACACTAACCTGTTTCCAGTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 90 bp | CCTTTGTCTGGAGACTGGAAACAGGTTAGTGTTTCCTTTACCCAGTaGATGTCATTGGGCTTTCAAAATGTGTTCTCACACAGGATGCTG | + |
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Preference number: 2 (lower is better) Translates to: PLSGDWKQVSVSFTQ*MSLGFQNVFSHRML Trigger: CAGCATCCTGTGTGAGAACACATTTTGAAAGCCCAATGACATCAACTGGGTAAAGGAAACACTAACCTGTTTCCAGTCTCCAGACAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | AAGGTTCTTGCATCTAGTTATGTGGTATGCCCAGGAATGCTCATAGCAGACCATTCCATGGAACATCAATaGTTGGTCCCTTGGCACTTT | + |
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Preference number: 2 (lower is better) Translates to: KVLASSYVVCPGMLIADHSMEHQ*LVPWHF Trigger: AAAGTGCCAAGGGACCAATCATTGATGTTCCATGGA...ATGGTCTGCTATGAGCATTCCTGGGCATACCACATAACTAGATGCAAGAACCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCTCCCAAGCCACAGATTaGACATTGCTCTCTCTAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSSQATD*TLLSLS Trigger: GCTTAGAGAGAGCAATGTCCAATCTGTGGCTTGGGA...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCACGGCCCTCCCTGACCTaGTATGTGTTCCAGGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: AKRENMLYDIQRHHVSIARPSLT*YVFQGD Trigger: ATCTCCCTGGAACACATACCAGGTCAGGGAGGGCCG...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR GCA 90 bp | ACAGAGCATGATGTCCTTGGTCACGGAGTGGATCTACTGGACTATGAGGTAGTCTTTAAAAATACAGAATaGTACCCCAAGGTTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: TEHDVLGHGVDLLDYEVVFKNTE*YPKVLA Trigger: TGCAAGAACCTTGGGGTAGCATTCTGTATTTTTAAA...GACTACCTCATAGTCCAGTAGATCCACTCCGTGACCAAGGACATCATGCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR GCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCCCCAACCATAGTTTTTaGTGGACATGTGTAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSPNHSF*WTCVRL Trigger: GAGCCTTACACATGTCCAGCAAAAACTATGGTTGGG...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | AAGGTTCTTGCATCTAGTTATGTGGTATGCCCAGGAATGCTCATAGCAGACCATTGGAACATCAATGATTaGTCCCTTGGCACTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: KVLASSYVVCPGMLIADHWNIND*SLGTLE Trigger: CTCTAAAGTGCCAAGGGACCAATCATTGATGTTCCA...ATGGTCTGCTATGAGCATTCCTGGGCATACCACATAACTAGATGCAAGAACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCAGGGATTTCCATGACTaGCTCCATGGAACATCAATG | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSRDFHD*LHGTSM Trigger: CATTGATGTTCCATGGAGCCAGTCATGGAAATCCCT...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCCCTTTGTCTGGAGACTaGAAACAGGTTAGTGTTTCC | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSPLSGD*KQVSVS Trigger: GGAAACACTAACCTGTTTCCAGTCTCCAGACAAAGG...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCAACATGAGAAAATATTaGCATCAGCCAGGCACACTG | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSNMRKY*HQPGTL Trigger: CAGTGTGCCTGGCTGATGTCAATATTTTCTCATGTT...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR TCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCCAGTCTGGACTAGAGTaGGACTCCATGTTAAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSQSGLE*DSMLNK Trigger: TTTGTTTAACATGGAGTCTCACTCTAGTCCAGACTG...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR GCA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCAACATGAGTGTGGTGTaGTGGTTACTTCAGAAACAA | + |
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Preference number: 2 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSNMSVV*WLLQKQ Trigger: TTGTTTCTGAAGTAACCAGCACACCACACTCATGTT...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGGAGACTGTAAGTTATACAATTATGCACCTGGGGTTGCTTTGGTTCTCAGTATGAGTGTGGTGTGCTaGTTACTTCAGAAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: MGDCKLYNYAPGVALVLSMSVVC*LLQKQR Trigger: TCTTTGTTTCTGAAGTAACCAGCACACCACACTCAT...ACTGAGAACCAAAGCAACCCCAGGTGCATAATTGTATAACTTACAGTCTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR GCA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCAAAAGAGCTGTCATTCTaGAAAGGCTGGAGCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: AKRENMLYDIQRHHVSIAKELSF*KGWSWC Trigger: ACACCAGCTCCAGCCTTTGCAGAATGACAGCTCTTT...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR TCA 72 bp | CCAGGGATTTCCATGACTGGCTCCATGGAACATCAATaGTTGGTCCCTTGGCACTTTAGAGGCCAGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PGISMTGSMEHQ*LVPWHFRGQRQ Trigger: TTGCCTCTGGCCTCTAAAGTGCCAAGGGACCAATCATTGATGTTCCATGGAGCCAGTCATGGAAATCCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR GCA 72 bp | TGTGCACAAGTTAGTGCACCAGAATGCCTTGTGCGCTaGTTATTCAATCTTTCCCTCATAGCAAGGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: CAQVSAPECLVR*LFNLSLIARPG Trigger: CCCTGGCCTTGCTATGAGGGAAAGATTGAATAAGCAGCGCACAAGGCATTCTGGTGCACTAACTTGTGCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR GCA 72 bp | CTGGAGCTGGTGTGTGCACAAGTTAGTGCACCAGAATaGCTTGTGCGCTGCTTATTCAATCTTTCCCTCATA | + |
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Preference number: 3 (lower is better) Translates to: LELVCAQVSAPE*LVRCLFNLSLI Trigger: TATGAGGGAAAGATTGAATAAGCAGCGCACAAGGCATTCTGGTGCACTAACTTGTGCACACACCAGCTCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTCTTGCATCTAGTTATGTGGTATGCCCAGGAATGCTCATAGCAGACCATGCCACAGATTGGACATaGCTCTCTCTAAGCACTGCA | + |
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Preference number: 3 (lower is better) Translates to: KVLASSYVVCPGMLIADHATDWT*LSLSTA Trigger: TGCAGTGCTTAGAGAGAGCAATGTCCAATCTGTGGC...ATGGTCTGCTATGAGCATTCCTGGGCATACCACATAACTAGATGCAAGAACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGGCAACTCCTGATCTTTTTGTTACCTTAAACATATGCCAGGAAAAAGGTTCGCAGGAATGTCACTaGCAGACACCTCCCAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PEATPDLFVTLNICQEKGSQECH*QTPPKP Trigger: TGGCTTGGGAGGTGTCTGCAAGTGACATTCCTGCGA...ACCTTTTTCCTGGCATATGTTTAAGGTAACAAAAAGATCAGGAGTTGCCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | ATGGGAGACTGTAAGTTATACAATTATGCACCTGGGGTTGCTTTGGTTCTCAGTAGATTCCACCTAAGGTaGAGCATTTGGTGGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: MGDCKLYNYAPGVALVLSRFHLR*SIWWGS Trigger: GCTGCCCCACCAAATGCTCAACCTTAGGTGGAATCT...ACTGAGAACCAAAGCAACCCCAGGTGCATAATTGTATAACTTACAGTCTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCCTCCCAAGCCACAGATaGGACATTGCTCTCTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSLPSHR*DIALSK Trigger: CTTAGAGAGAGCAATGTCCAATCTGTGGCTTGGGAG...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGCATGATGTCCTTGGTCACGGAGTGGATCTACTGGACTATGAGGTAGTCGAAAGAAAAACCATTTaGAATCTGGGCACCGTAATG | + |
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Preference number: 3 (lower is better) Translates to: TEHDVLGHGVDLLDYEVVERKTI*NLGTVM Trigger: CATTACGGTGCCCAGATTCAAAATGGTTTTTCTTTC...GACTACCTCATAGTCCAGTAGATCCACTCCGTGACCAAGGACATCATGCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCGCACCTGGGGTTGCTTaGGTTCTCAGTATAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSAPGVA*VLSIVC Trigger: ACACACTATACTGAGAACCAAAGCAACCCCAGGTGC...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CCA 72 bp | CTGTCTTTCCACAAAGGCAAACAAAGGACGAAGAAATaGGGCAGGCTTCTCTTTAGTTTCCATGGGTATGGA | + |
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Preference number: 3 (lower is better) Translates to: LSFHKGKQRTKK*GRLLFSFHGYG Trigger: TCCATACCCATGGAAACTAAAGAGAAGCCTGCCCCATTTCTTCGTCCTTTGTTTGCCTTTGTGGAAAGACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCACCTAAGGTTGAGCATTaGGTGGGGCAGCCTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: AKRENMLYDIQRHHVSIAPKVEH*VGQPPG Trigger: TCCTGGAGGCTGCCCCACCAAATGCTCAACCTTAGG...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR TCA 72 bp | TGGTCCCTTGGCACTTTAGAGGCCAGAGGCAACTCCTaGTCTTTTTGTTACCTTAAACATATGCCAGGAAAA | + |
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Preference number: 3 (lower is better) Translates to: WSLGTLEARGNS*SFCYLKHMPGK Trigger: TTTTCCTGGCATATGTTTAAGGTAACAAAAAGATCAGGAGTTGCCTCTGGCCTCTAAAGTGCCAAGGGACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCAAGCAAGGCCAGGGCTTaGGATGAGAGCTGTGTGAAC | + |
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Preference number: 3 (lower is better) Translates to: AKRENMLYDIQRHHVSIASKARA*DESCVN Trigger: GTTCACACAGCTCTCATCCAAAGCCCTGGCCTTGCT...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | TCCGTTAGAACTTTAAAATGTAGCCTGAAAGTGCTGTTTATGCTCCCCCTTTCCCTTTTCTCACACAGTTaGACTCTTGACATAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SVRTLKCSLKVLFMLPLSLFSHS*TLDIEG Trigger: CCCCTCTATGTCAAGAGTCAAACTGTGTGAGAAAAG...GGAAAGGGGGAGCATAAACAGCACTTTCAGGCTACATTTTAAAGTTCTAACGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCACAGAGCATGATGTCCTaGGTCACGGAGTGGATCTAC | + |
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Preference number: 3 (lower is better) Translates to: AKRENMLYDIQRHHVSIAQSMMS*VTEWIY Trigger: GTAGATCCACTCCGTGACCAAGGACATCATGCTCTG...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR TCA 72 bp | CATTGGGCTTTCAAAATGTGTTCTCACACAGGATGCTaGCTGTCCTTCAGCCAAATCAAATGGCAAAGAAAT | + |
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Preference number: 3 (lower is better) Translates to: HWAFKMCSHTGC*LSFSQIKWQRN Trigger: ATTTCTTTGCCATTTGATTTGGCTGAAGGACAGTCAGCATCCTGTGTGAGAACACATTTTGAAAGCCCAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CCA 72 bp | TTCCCCTTTGTCCTTTTAAACATGAGTGTGGTGTGCTaGTTACTTCAGAAACAAAGAGCTGTCATTCTGCAA | + |
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Preference number: 3 (lower is better) Translates to: FPFVLLNMSVVC*LLQKQRAVILQ Trigger: TTGCAGAATGACAGCTCTTTGTTTCTGAAGTAACCAGCACACCACACTCATGTTTAAAAGGACAAAGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR-3UTR CAA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCATGTGTACTACCCTTGTaGATGTCCCTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: AKRENMLYDIQRHHVSIACVLPL*MSLCVC Trigger: ACACACACACAGGGACATCAACAAGGGTAGTACACA...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CCA 72 bp | CAGTTCTTGAAAAGCTTTAAACCTTTGTCTGGAGACTaGAAACAGGTTAGTGTTTCCTTTACCCAGTTGATG | + |
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Preference number: 3 (lower is better) Translates to: QFLKSFKPLSGD*KQVSVSFTQLM Trigger: CATCAACTGGGTAAAGGAAACACTAACCTGTTTCCAGTCTCCAGACAAAGGTTTAAAGCTTTTCAAGAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR GCA 72 bp | GAAATTTTATACGAGCGATTCTACAGATTTACAAAGTaGAATGGCAGAGTGCAAACAGGCAAAAAGAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: EILYERFYRFTK*NGRVQTGKKRK Trigger: TTTTCTCTTTTTGCCTGTTTGCACTCTGCCATTGCACTTTGTAAATCTGTAGAATCGCTCGTATAAAATTTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CCA 72 bp | CTAGAAACAGGTATCAATTCAATAATTGACATCTTTTaGCAGGCAAATTTAGCTAGCTGTCTTCAAAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: LETGINSIIDIF*QANLASCLQKD Trigger: GTCCTTTTGAAGACAGCTAGCTAAATTTGCCTGCCAAAAGATGTCAATTATTGAATTGATACCTGTTTCTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR TCA 72 bp | GGGTTCAAATTTGTCTTCAGATGTGGATTTTCTGATTaGTATTCAAAGCAACAACCTCACATGATATACTCT | + |
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Preference number: 3 (lower is better) Translates to: GFKFVFRCGFSD*YSKQQPHMIYS Trigger: AGAGTATATCATGTGAGGTTGTTGCTTTGAATATCAATCAGAAAATCCACATCTGAAGACAAATTTGAACCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 72 bp | GACCTGGTATGTGTTCCAGGGAGATTCCACCTAAGGTaGAGCATTTGGTGGGGCAGCCTCCAGGAAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: DLVCVPGRFHLR*SIWWGSLQEKV Trigger: CACCTTTTCCTGGAGGCTGCCCCACCAAATGCTCAACCTTAGGTGGAATCTCCCTGGAACACATACCAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR TCA 90 bp | AGATTCCACCTAAGGTTGAGCATTTGGTGGGGCAGCCTCCAGGAAAAGGTGTTCTTCTCCTGGGATGCATaGTGGGATCACGGTTGTGCT | + |
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Preference number: 4 (lower is better) Translates to: RFHLRLSIWWGSLQEKVFFSWDA*WDHGCA Trigger: AGCACAACCGTGATCCCATCATGCATCCCAGGAGAA...GAACACCTTTTCCTGGAGGCTGCCCCACCAAATGCTCAACCTTAGGTGGAATCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR GCA 90 bp | GAGTGGAGGCCAGCCTTCTGTCTTTCCACAAAGGCAAACAAAGGACGAAGAAATCGGATTCTCCTGGGATaGATGATGGGATCACGGTTG | + |
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Preference number: 4 (lower is better) Translates to: EWRPAFCLSTKANKGRRNRILLG*MMGSRL Trigger: CAACCGTGATCCCATCATGCATCCCAGGAGAATCCG...ATTTCTTCGTCCTTTGTTTGCCTTTGTGGAAAGACAGAAGGCTGGCCTCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 72 bp | AGGAATGTCACTTGCAGACACCTCCCAAGCCACAGATaGGACATTGCTCTCTCTAAGCACTGCATCAGCTTA | + |
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Preference number: 4 (lower is better) Translates to: RNVTCRHLPSHR*DIALSKHCISL Trigger: TAAGCTGATGCAGTGCTTAGAGAGAGCAATGTCCAATCTGTGGCTTGGGAGGTGTCTGCAAGTGACATTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 72 bp | CTTATTCAATCTTTCCCTCATAGCAAGGCCAGGGCTTaGGATGAGAGCTGTGTGAACCTTCCAGGGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: LIQSFPHSKARA*DESCVNLPGIS Trigger: GGAAATCCCTGGAAGGTTCACACAGCTCTCATCCAAAGCCCTGGCCTTGCTATGAGGGAAAGATTGAATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR TCA 90 bp | GAGTGGAGGCCAGCCTTCTGTCTTTCCACAAAGGCAAACAAAGGACGAAGAAATGGATCGTCTTCCATCTaGACTAAGGCGGTACAGTTA | + |
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Preference number: 4 (lower is better) Translates to: EWRPAFCLSTKANKGRRNGSSSI*TKAVQL Trigger: TAACTGTACCGCCTTAGTTCAGATGGAAGACGATCC...ATTTCTTCGTCCTTTGTTTGCCTTTGTGGAAAGACAGAAGGCTGGCCTCCACTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR TCA 90 bp | CCAGAGGCAACTCCTGATCTTTTTGTTACCTTAAACATATGCCAGGAAAAAGGTCAGCACTGGGTCCCCTaGGGTCACTCTCTCATATTC | + |
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Preference number: 4 (lower is better) Translates to: PEATPDLFVTLNICQEKGQHWVP*GHSLIF Trigger: GAATATGAGAGAGTGACCTCAGGGGACCCAGTGCTG...ACCTTTTTCCTGGCATATGTTTAAGGTAACAAAAAGATCAGGAGTTGCCTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR GCA 90 bp | ATGGGAGACTGTAAGTTATACAATTATGCACCTGGGGTTGCTTTGGTTCTCAGTACAGTTAGAAAGAAGTaGTCACATCGCAGACCAGTG | + |
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Preference number: 4 (lower is better) Translates to: MGDCKLYNYAPGVALVLSTVRKK*SHRRPV Trigger: CACTGGTCTGCGATGTGAGCACTTCTTTCTAACTGT...ACTGAGAACCAAAGCAACCCCAGGTGCATAATTGTATAACTTACAGTCTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR GCA 90 bp | ATGGGAGACTGTAAGTTATACAATTATGCACCTGGGGTTGCTTTGGTTCTCAGTAGCCCACTTCACATCTaGAGAATTTCTCTCTCATGT | + |
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Preference number: 4 (lower is better) Translates to: MGDCKLYNYAPGVALVLSSPLHI*RISLSC Trigger: ACATGAGAGAGAAATTCTGCAGATGTGAAGTGGGCT...ACTGAGAACCAAAGCAACCCCAGGTGCATAATTGTATAACTTACAGTCTCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 72 bp | AAACAGGTTAGTGTTTCCTTTACCCAGTTGATGTCATaGGGCTTTCAAAATGTGTTCTCACACAGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: KQVSVSFTQLMS*GFQNVFSHRML Trigger: CAGCATCCTGTGTGAGAACACATTTTGAAAGCCCAATGACATCAACTGGGTAAAGGAAACACTAACCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 72 bp | GACTGTAAGTTATACAATTATGCACCTGGGGTTGCTTaGGTTCTCAGTATAGTGTGTGTACTACCCTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: DCKLYNYAPGVA*VLSIVCVLPLL Trigger: CAACAAGGGTAGTACACACACTATACTGAGAACCAAAGCAACCCCAGGTGCATAATTGTATAACTTACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR TCA 90 bp | GCAAAAAGAGAAAATATGCTCTATGACATTCAAAGGCATCATGTGTCAATAGCATTGCTCAAGGGTTGGTaGACAGTTAGAAAGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: AKRENMLYDIQRHHVSIALLKGW*TVRKKC Trigger: GCACTTCTTTCTAACTGTTCACCAACCCTTGAGCAA...TGCTATTGACACATGATGCCTTTGAATGTCATAGAGCATATTTTCTCTTTTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| 3UTR CAA 72 bp | ACATATTTAAAAATACAGAATGCTACCCCAAGGTTCTaGCATCTAGTTATGTGGTATGCCCAGGAATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: TYLKIQNATPRF*HLVMWYAQECS Trigger: TGAGCATTCCTGGGCATACCACATAACTAGATGCAAGAACCTTGGGGTAGCATTCTGTATTTTTAAATATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS-3UTR CAA 90 bp | ATGGGAGACTGTAAGTTATACAATTATGCACCTGGGGTTGCTTTGGTTCTCAGTCTTTGTAATCTGCACTaGAGCCACACGGGGATCGTC | + |
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Preference number: 5 (lower is better) Translates to: MGDCKLYNYAPGVALVLSLCNLH*SHTGIV Trigger: GACGATCCCCGTGTGGCTCAAGTGCAGATTACAAAG...ACTGAGAACCAAAGCAACCCCAGGTGCATAATTGTATAACTTACAGTCTCCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS GCA 72 bp | ATCTGCAGAATTTCTCTCTCATGTCCACCAGGTAGATaGACTGGCCATGCAAGCAGTAGCCGTCCATGTCAG | + |
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Preference number: 6 (lower is better) Translates to: ICRISLSCPPGR*TGHASSSRPCQ Trigger: CTGACATGGACGGCTACTGCTTGCATGGCCAGTGCATCTACCTGGTGGACATGAGAGAGAAATTCTGCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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| CDS GCA 72 bp | GCTCACATCGCAGACCAGTGTAGCCCACTTCACATCTaGAGAATTTCTCTCTCATGTCCACCAGGTAGATGC | + |
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Preference number: 6 (lower is better) Translates to: AHIADQCSPLHI*RISLSCPPGRC Trigger: GCATCTACCTGGTGGACATGAGAGAGAAATTCTGCAGATGTGAAGTGGGCTACACTGGTCTGCGATGTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031324.6 |
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