Pregenerated sensors for ERCC8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021694Ensembl transcript IDs: ENSMUST00000054835.15, ENSMUST00000120672.8, ENSMUST00000123138.2, ENSMUST00000123182.8, ENSMUST00000123657.8, ENSMUST00000129117.8, ENSMUST00000133957.8, ENSMUST00000142931.8, ENSMUST00000152634.8
Found 266 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCATGGCGAGCCGCTCTCCCGAGTGGACTGCGTACACAGCGATGGTaGAGGGTGTTGTCCCCGCTGGAGCTATTCCAGAGGCGCATTCGG | + |
|
Preference number: 1 (lower is better) Translates to: AWRAALPSGLRTQRW*RVLSPLELFQRRIR Trigger: CCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCTCGCCATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000142931.8 |
||
| 3UTR GCA 90 bp | GCATGGCGAGCCGCTCTCCCGAGTGGACTGCGTACACAGCGATGGTaGTGCCGTGGGGAACAAACACAAACTCTGAGCTGCAGCCACAGG | + |
|
Preference number: 1 (lower is better) Translates to: AWRAALPSGLRTQRW*CRGEQTQTLSCSHR Trigger: CCTGTGGCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCTCGCCATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 90 bp | TGGCGAGCCGCTCTCCCGAGTGGACTGCGTACACAGCGATGGTGCTaGCGTGGGGAACAAACACAAACTCTGAGCTGCAGCCACAGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: WRAALPSGLRTQRWC*RGEQTQTLSCSHRR Trigger: TCTCCTGTGGCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCTCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | AGCCGCTCTCCCGAGTGGACTGCGTACACAGCGATGGTGCTGCCGTaGGGAACAAACACAAACTCTGAGCTGCAGCCACAGGAGACAGCG | + |
|
Preference number: 1 (lower is better) Translates to: SRSPEWTAYTAMVLP*GTNTNSELQPQETA Trigger: CGCTGTCTCCTGTGGCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 90 bp | TTTGTAATGTCCCTTGAGCATGGCGAGCCGCTCTCCCGAGTGGACTaGGTACACAGCGATGGTGCAGGGTGTTGTCCCCGCTGGAGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: FVMSLEHGEPLSRVD*VHSDGAGCCPRWSY Trigger: ATAGCTCCAGCGGGGACAACACCCTGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCTCGCCATGCTCAAGGGACATTACAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000142931.8 |
||
| 3UTR TCA 90 bp | TGCGTACACAGCGATGGTGCTGCCGTGGGGAACAAACACAAACTCTaGGCTGCAGCCACAGGAGACAGCGAACTGCAGCCCTTTCCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: CVHSDGAAVGNKHKL*AAATGDSELQPFPA Trigger: AGCAGGAAAGGGCTGCAGTTCGCTGTCTCCTGTGGCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 90 bp | TTTGTAATGTCCCTTGAGCATGGCGAGCCGCTCTCCCGAGTGGACTaGGTACACAGCGATGGTGCTGCCGTGGGGAACAAACACAAACTC | + |
|
Preference number: 1 (lower is better) Translates to: FVMSLEHGEPLSRVD*VHSDGAAVGNKHKL Trigger: GAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCTCGCCATGCTCAAGGGACATTACAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | CAGCTGGGAATAACAAGTCTGTTCTTGGGCTGTGCCCGTAGGGGCTaGCCCACCACCCTGGTGAATGCGCTCAAGGAGACAAGTTCTGAT | + |
|
Preference number: 1 (lower is better) Translates to: QLGITSLFLGCARRG*PTTLVNALKETSSD Trigger: ATCAGAACTTGTCTCCTTGAGCGCATTCACCAGGGTGGTGGGCCAGCCCCTACGGGCACAGCCCAAGAACAGACTTGTTATTCCCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | TCCTCGTCACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTaGGATTTGGCTGGAGCTTCATCGTCATCATCAGGAACTGGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: SSSLLLQASANAGFN*DLAGASSSSSGTGS Trigger: TGAGCCAGTTCCTGATGATGACGATGAAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 90 bp | GTATACACCTCTAACCCCAGCACCTGGGAGCAGAGGCAGAATAGCTaGCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTCCAGGCTAGT | + |
|
Preference number: 1 (lower is better) Translates to: VYTSNPSTWEQRQNS*QCEPSLLYTEFQAS Trigger: ACTAGCCTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 90 bp | AGGACGACAACCCCAGTGTCAGCCGCTGGCTTACACTCATACATGTaGACCTTGCTGTTGCCAAGATATAGTCATGGCGTGGTGACCAGG | + |
|
Preference number: 1 (lower is better) Translates to: RTTTPVSAAGLHSYM*TLLLPRYSHGVVTR Trigger: CCTGGTCACCACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACTGGGGTTGTCGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | CACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTaGCTGGAGCTTCATCGTCATCATCAGGAACTGGCTCATAGGAAG | + |
|
Preference number: 1 (lower is better) Translates to: HCCSRRPRMLGLTGI*LELHRHHQELAHRK Trigger: CTTCCTATGAGCCAGTTCCTGATGATGACGATGAAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 90 bp | CTCTCTGGCGGCTTGGCAGAGAGCATCTTCCCCTGCCATCTTGCCTaGCCTATTTGCCTTTTGATACCTACAATCCAGCTGTCACTGTCC | + |
|
Preference number: 1 (lower is better) Translates to: LSGGLAESIFPCHLA*PICLLIPTIQLSLS Trigger: GGACAGTGACAGCTGGATTGTAGGTATCAAAAGGCAAATAGGTCAGGCAAGATGGCAGGGGAAGATGCTCTCTGCCAAGCCGCCAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR TCA 90 bp | CTTCACGGAGAGCAAGCAGTCCTGCTCTCTCCCTGTACTAGTGCCTaGAGGTCTGTAGGCAGTGATCTTTCCTTCTACAGACTGTCTGCT | + |
|
Preference number: 1 (lower is better) Translates to: LHGEQAVLLSPCTSA*RSVGSDLSFYRLSA Trigger: AGCAGACAGTCTGTAGAAGGAAAGATCACTGCCTACAGACCTTCAGGCACTAGTACAGGGAGAGAGCAGGACTGCTTGCTCTCCGTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR GCA 90 bp | TCAAAACCAACAATAACGGGAAGAACAACCCTGCTCGTGCTGAAGTaGACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGG | + |
|
Preference number: 1 (lower is better) Translates to: SKPTITGRTTLLVLK*TQHCRGSLMDKEPG Trigger: CCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAGGGTTGTTCTTCCCGTTATTGTTGGTTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | GGCTGGAGCTTCATCGTCATCATCAGGAACTGGCTCATAGGAAGGTaGTACCCAAGCAAGAATATTGCAGTCCCTGCTTCCACTGTAAAG | + |
|
Preference number: 1 (lower is better) Translates to: GWSFIVIIRNWLIGR*YPSKNIAVPASTVK Trigger: CTTTACAGTGGAAGCAGGGACTGCAATATTCTTGCTTGGGTACCACCTTCCTATGAGCCAGTTCCTGATGATGACGATGAAGCTCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | GTACCTTGGGTCCTCTTGTTCCAACTGCTACCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGATGACTGTAAACTGTTTCCTCAAAAT | + |
|
Preference number: 1 (lower is better) Translates to: VPWVLLFQLLPDSAW*LLGTCDDCKLFPQN Trigger: ATTTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 90 bp | GAGCTGATTCATGTCACTAGAGAGTCTCTTGCTTTCTCTGGGCTCTaGACTGTGAATGCCTTCAAGACGGATATCATGCAAAGGAGGGCA | + |
|
Preference number: 1 (lower is better) Translates to: ELIHVTRESLAFSGL*TVNAFKTDIMQRRA Trigger: TGCCCTCCTTTGCATGATATCCGTCTTGAAGGCATTCACAGTTCAGAGCCCAGAGAAAGCAAGAGACTCTCTAGTGACATGAATCAGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR CCA 90 bp | GGGTCCTCTTGTTCCAACTGCTACCAGACAGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTAAACTGTTTCCTCAAAATTAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: GSSCSNCYQTVLGGC*GHVMTVNCFLKIKH Trigger: GTGTTTAATTTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 90 bp | CTGTCACTGTCCCTCAGTAATCACACTTTGACCTCCTCGGGTCACTaGCCCCTCCTACAGGTTTTTGTGTATGTGATCTTCTTTCCTTTT | + |
|
Preference number: 1 (lower is better) Translates to: LSLSLSNHTLTSSGH*PLLQVFVYVIFFPF Trigger: AAAAGGAAAGAAGATCACATACACAAAAACCTGTAGGAGGGGTCAGTGACCCGAGGAGGTCAAAGTGTGATTACTGAGGGACAGTGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR GCA 90 bp | CTTGGGTCCTCTTGTTCCAACTGCTACCAGACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACTGTAAACTGTTTCCTCAAAATTAAA | + |
|
Preference number: 1 (lower is better) Translates to: LGSSCSNCYQTVLGG*WGHVMTVNCFLKIK Trigger: TTTAATTTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | GCAGTGTTTGCTGATTCAGCAGCTTGTGACTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCATCCTGACGCTCTTCTCACATCCCAT | + |
|
Preference number: 1 (lower is better) Translates to: AVFADSAACDFFPLC*SRVSKHPDALLTSH Trigger: ATGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATCAGCAAACACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000123138.2 ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 90 bp | TGTGTGTACAAGAATACAAGGAAAAGTATCAGAGGACAACTTATGTaGGCTTGTATTCTCCTCTCTGGCGGCTTGGCAGAGAGCATCTTC | + |
|
Preference number: 1 (lower is better) Translates to: CVYKNTRKSIRGQLM*ACILLSGGLAESIF Trigger: GAAGATGCTCTCTGCCAAGCCGCCAGAGAGGAGAATACAAGCTCACATAAGTTGTCCTCTGATACTTTTCCTTGTATTCTTGTACACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR GCA 90 bp | AATACAAAGTGGTCAGGGATTGCCTATGTGATACGATGTTCACACTaGAAGATGCATGAGTGGCTAACATTCAATATGAGGGAGAAGAGG | + |
|
Preference number: 1 (lower is better) Translates to: NTKWSGIAYVIRCSH*KMHEWLTFNMREKR Trigger: CCTCTTCTCCCTCATATTGAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAATCCCTGACCACTTTGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 90 bp | TGTTCATATAAAAATACCTGCTACCAGACAGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTAAACTGTTTCCTCAAAATTAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: CSYKNTCYQTVLGGC*GHVMTVNCFLKIKH Trigger: GTGTTTAATTTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGGTATTTTTATATGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123182.8 |
||
| 3UTR CCA 90 bp | ACAATCACTCCTGAGTTGACACAAGGAAAGGAAAGAACAATTGTATaGCATTTCATGTTTAATCTACATCCCTGCATGGATTTTGCTGAG | + |
|
Preference number: 1 (lower is better) Translates to: TITPELTQGKERTIV*HFMFNLHPCMDFAE Trigger: CTCAGCAAAATCCATGCAGGGATGTAGATTAAACATGAAATGCCATACAATTGTTCTTTCCTTTCCTTGTGTCAACTCAGGAGTGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCACCTGGGAGCAGAGGCTGTGCCCGTAGGGGCTaGCCCACCACCCTGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TGGATWYTPLTPAPGSRGCARRG*PTTLVN Trigger: ATTCACCAGGGTGGTGGGCCAGCCCCTACGGGCACA...GCCTCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CAA 90 bp | AGCCTGCAGCCTGCAGCCTGCAGCCTGCAGCACGAGGGTGAGGGCTaGAGCACAGGTTCCCTGAAAAGCCAGCTGCAGCTGTGTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SLQPAACSLQHEGEG*STGSLKSQLQLCAS Trigger: AGAAGCACACAGCTGCAGCTGGCTTTTCAGGGAACCTGTGCTCAAGCCCTCACCCTCGTGCTGCAGGCTGCAGGCTGCAGGCTGCAGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR CAA 90 bp | GCCGCTCTCCCGAGTGGACTGCGTACACAGCGATGGTGCAGGGTGTaGTCCCCGCTGGAGCTATTCCAGAGGCGCATTCGGTTGTCTGTG | + |
|
Preference number: 2 (lower is better) Translates to: AALPSGLRTQRWCRV*SPLELFQRRIRLSV Trigger: CACAGACAACCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000142931.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCCTCGTCACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTGTGCCCGTAGGGGCTaGCCCACCACCCTGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: PSSSLLLQASANAGFNWDCARRG*PTTLVN Trigger: ATTCACCAGGGTGGTGGGCCAGCCCCTACGGGCACA...ATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACGAGGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCACCTGGGAGCAGAGGCTCTAACCCCAGCACCTaGGAGCAGAGGCAGAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: TGGATWYTPLTPAPGSRGSNPST*EQRQNS Trigger: GCTATTCTGCCTCTGCTCCCAGGTGCTGGGGTTAGA...GCCTCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTCACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTGGCTGGTGGGAAGGGCAGGCTaGCAGCACAGTCAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RHCCSRRPRMLGLTGIWLVGRAG*QHSQES Trigger: TGACTCCTGACTGTGCTGCCAGCCTGCCCTTCCCAC...CAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCACCTGGGAGCAGAGGCCTACCAGACAGTGCTTaGTGGCTGCTGGGGACATGT | + |
|
Preference number: 2 (lower is better) Translates to: TGGATWYTPLTPAPGSRGLPDSA*WLLGTC Trigger: ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAG...GCCTCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGACAGTCACCCATGTGCCCGTAGGGGCTaGCCCACCACCCTGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: TTLSWKSDGQGARADSHPCARRG*PTTLVN Trigger: ATTCACCAGGGTGGTGGGCCAGCCCCTACGGGCACA...TGGGTGACTGTCAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGTGGGAAGGGCAGGCTaGCAGCACAGTCAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: AEVHTTLSWKSDGQGARAVGRAG*QHSQES Trigger: TGACTCCTGACTGTGCTGCCAGCCTGCCCTTCCCAC...AGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTGGCTGGAGCTTCAGAGGCAGAATAGCTaGCAGTGTGAGCCGAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CCSRRPRMLGLTGIWLELQRQNS*QCEPSL Trigger: CAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTG...AAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCCGTAGGGGCTGGCCCACCACCCTGGTGAATGCGCTCAAGGAGACAAGTTCTCCCAAGCAAGAATATTaGAGTCCCTGCTTCCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: ARRGWPTTLVNALKETSSPKQEY*SPCFHC Trigger: ACAGTGGAAGCAGGGACTGCAATATTCTTGCTTGGG...AGAACTTGTCTCCTTGAGCGCATTCACCAGGGTGGTGGGCCAGCCCCTACGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCAGAGCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATTGTGCCCGTAGGGGCTaGCCCACCACCCTGGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: GVRAESFLGHTFSSLDAHCARRG*PTTLVN Trigger: ATTCACCAGGGTGGTGGGCCAGCCCCTACGGGCACA...ATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCTGACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAGTCTGCTCTATACAGAGTTCCAGGCTAGTCCAGGCTAGCCAGGGTTACATCGTGGGAAGGGCAGGCTaGCAGCACAGTCAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: RVCSIQSSRLVQASQGYIVGRAG*QHSQES Trigger: TGACTCCTGACTGTGCTGCCAGCCTGCCCTTCCCAC...GATGTAACCCTGGCTAGCCTGGACTAGCCTGGAACTCTGTATAGAGCAGACTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGGCAGAATAGCTGCCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTCCAGGTGGGAAGGGCAGGCTaGCAGCACAGTCAGGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: QRQNSCQCEPSLLYTEFQVGRAG*QHSQES Trigger: TGACTCCTGACTGTGCTGCCAGCCTGCCCTTCCCAC...CTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTGGCTGGAGCTTCCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: CCSRRPRMLGLTGIWLELPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...AAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | CCATCCTCGTCACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATAGTAAGCAAGCATCCTaGCGCTCTTCTCACATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PSSSLLLQASANAGFNWDSKQAS*RSSHIP Trigger: TGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACT...ATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACGAGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGCAGAGGCAGAATAGCTaGCAGTGTGAGCCGAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: LKCTQHCRGSLMDKEPGLQRQNS*QCEPSL Trigger: CAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTG...CAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCCAGTGTCAGCCGACTGCTACCAGACAGTaGTTGGTGGCTGCTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: SGELLNKSSGGRQPQCQPTATRQ*LVAAGD Trigger: GTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGT...CGGCTGACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTGTTGTCCCCGCTGGAGCTATTCCAGAGGCGCATTCGGTTGTCTGTGCCAGAGCTGAGAGCTTCCTaGGTCATACTTTCAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVLSPLELFQRRIRLSVPELRAS*VILSAP Trigger: AGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTC...TGGCACAGACAACCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGGCTGGCAGCACAGTCAGGAGTCAGAGCTGAGAGCTTCCTGGGTCATACTTGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: AGWQHSQESELRASWVILVLGGC*GHVMTV Trigger: TACAGTCATCACATGTCCCCAGCAGCCACCAAGCAC...AAGTATGACCCAGGAAGCTCTCAGCTCTGACTCCTGACTGTGCTGCCAGCCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGCTACCAGACAGTGCTTaGTGGCTGCTGGGGACATGT | + |
|
Preference number: 2 (lower is better) Translates to: LKCTQHCRGSLMDKEPGLLPDSA*WLLGTC Trigger: ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAG...CAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCACCTGGGAGCAGAGGCCAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: TGGATWYTPLTPAPGSRGQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...GCCTCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCACAAGGAGCCAGGGCTaGCAGTCACCCATCCTCGTC | + |
|
Preference number: 2 (lower is better) Translates to: AESFLGHTFSSLDAHMKVTRSQG*QSPILV Trigger: GACGAGGATGGGTGACTGTCAGCCCTGGCTCCTTGT...GACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTCACCACCCTGGTGAATaGGCTCAAGGAGACAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: AEVHTTLSWKSDGQGARAHHPGE*AQGDKF Trigger: GAACTTGTCTCCTTGAGCGCATTCACCAGGGTGGTG...AGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCCCAGCACTGCTACCAGACAGTaGTTGGTGGCTGCTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: ELPGSYFQLLGCTYEGPSTATRQ*LVAAGD Trigger: GTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGT...GCTGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCCAGTGTACTGCTACCAGACAGTaGTTGGTGGCTGCTGGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: RLSGELLNKSSGGRQPQCTATRQ*LVAAGD Trigger: GTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGT...ACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGGAGCTATTCCAGAGGCGCATTCGGTTGTCTGTGCCAATGGTGAGCAGGTGGAGCTGAGAGCTTCCTaGGTCATACTTTCAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AGAIPEAHSVVCANGEQVELRAS*VILSAP Trigger: AGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTC...CACCTGCTCACCATTGGCACAGACAACCGAATGCGCCTCTGGAATAGCTCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCTGGAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTGAGCATGGCGAGACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: RLEHTAVDAFVMSLEHGETVLGG*WGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGT...CTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCCAGTGTCAGCCGACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: SGELLNKSSGGRQPQCQPTVLGG*WGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGT...CGGCTGACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CGAGTCTGCTCTATACAGAGTTCCAGGCTAGTCCAGGCTAGCCAGGGTTACATCACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACT | + |
|
Preference number: 2 (lower is better) Translates to: RVCSIQSSRLVQASQGYITVLGG*WGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGT...GATGTAACCCTGGCTAGCCTGGACTAGCCTGGAACTCTGTATAGAGCAGACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCTCAAGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: RSRLSGELLNKSSGGRQPVLGGC*GHVMTV Trigger: TACAGTCATCACATGTCCCCAGCAGCCACCAAGCAC...GGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAGTCTGCTCTATACAGAGTTCCAGGCTAGTCCAGGCTAGCCAGGGTTACATCCCCAGTGTCAGCCGCTaGCTTACACTCATACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: RVCSIQSSRLVQASQGYIPSVSR*LTLIHV Trigger: CACATGTATGAGTGTAAGCCAGCGGCTGACACTGGG...GATGTAACCCTGGCTAGCCTGGACTAGCCTGGAACTCTGTATAGAGCAGACTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152634.8 |
||
| 3UTR CAA 90 bp | CCAGTGTCAGCCGCTGGCTTACACTCATACATGTGCACCTTGCTGTaGCCAAGATATAGTCATGGCGTGGTGACCAGGAAACTGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PVSAAGLHSYMCTLL*PRYSHGVVTRKLPR Trigger: TCTTGGCAGTTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CAA 90 bp | ACAACCCCAGTGTCAGCCGCTGGCTTACACTCATACATGTGCACCTaGCTGTTGCCAAGATATAGTCATGGCGTGGTGACCAGGAAACTG | + |
|
Preference number: 2 (lower is better) Translates to: TTPVSAAGLHSYMCT*LLPRYSHGVVTRKL Trigger: CAGTTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACTGGGGTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTTGCAACAAGTTTCTCTAATCCTCCTTGCTAAACTCCTCCCTGAAGGTGGGACTGTCGTGGAAGTCTaGTGGACAAGGAGCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLQQVSLILLAKLLPEGGTVVEV*WTRSQG Trigger: GCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGT...CCCACCTTCAGGGAGGAGTTTAGCAAGGAGGATTAGAGAAACTTGTTGCAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCAGAGCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTA | + |
|
Preference number: 2 (lower is better) Translates to: GVRAESFLGHTFSSLDAHVLGGC*GHVMTV Trigger: TACAGTCATCACATGTCCCCAGCAGCCACCAAGCAC...ATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCTGACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCGCTCAAGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACTACCAGACAGTGCTTaGTGGCTGCTGGGGACATGT | + |
|
Preference number: 2 (lower is better) Translates to: MRSRLSGELLNKSSGGRQLPDSA*WLLGTC Trigger: ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAG...TTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGCTGCAGCCACAGGAGACAGCGAACTGCAGCCCTTTCCTGCTGTCATTACACCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: ELQPQETANCSPFLLSLHHKVVP*VLLFQL Trigger: CAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG...GTGTAATGACAGCAGGAAAGGGCTGCAGTTCGCTGTCTCCTGTGGCTGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAACAAACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACCTCACTGTCGTGGAAGTCTaGTGGACAAGGAGCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: NETNNHTHVQEGPRGIHLTVVEV*WTRSQG Trigger: GCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGT...GAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGTTTGTTTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | ATCATCAGGAACTGGCTCATAGGAAGGTGGTACCCAAGCAAGAATATTGCAGTCACTGTCGTGGAAGTCTaGTGGACAAGGAGCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: IIRNWLIGRWYPSKNIAVTVVEV*WTRSQG Trigger: GCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGT...GACTGCAATATTCTTGCTTGGGTACCACCTTCCTATGAGCCAGTTCCTGATGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCCTCTTGTTCCAACTGCTACCAGACAGTGCTTGGTGGCTGCTGGGGACATGTAACACATCTGCAGCCTaGAATGTGTTTGTATCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VLLFQLLPDSAWWLLGTCNTSAA*NVFVSH Trigger: GTGGGATACAAACACATTGCAGGCTGCAGATGTGTT...ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGGCAGAATAGCTGCCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTCCAGGTCAGCACTTGCTGTTaGCAAGATATAGTCATGGCG | + |
|
Preference number: 2 (lower is better) Translates to: QRQNSCQCEPSLLYTEFQVSTCC*QDIVMA Trigger: CGCCATGACTATATCTTGGCAACAGCAAGTGCTGAC...CTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGTTGCCAAGATATAGTCATGGCGTGGTGACCAGGAAACTGCCAAGATTTCCTCCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLPRYSHGVVTRKLPRFPPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...AGGAAATCTTGGCAGTTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTGAGCATGGCGAGCCGCTCCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: EHTAVDAFVMSLEHGEPLHKVVP*VLLFQL Trigger: CAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG...GAGCGGCTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCGCTCAAGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCAGTGTCAGCCGCTaGCTTACACTCATACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: MRSRLSGELLNKSSGGRQPSVSR*LTLIHV Trigger: CACATGTATGAGTGTAAGCCAGCGGCTGACACTGGG...TTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAGCTGGGAATAACAAGTCTGTTCTTGGGCTGTGCCCGTAGGGGCTGGCCCTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SQLGITSLFLGCARRGWPFFPLC*SRVSKH Trigger: ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAA...GGGCCAGCCCCTACGGGCACAGCCCAAGAACAGACTTGTTATTCCCAGCTGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CCGCTGGCTTACACTCATACATGTGCACCTTGCTGTTGCCAAGATATAGTCATGCTGCTCGTGCTGAAGTaGACACAACACTGTCGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PLAYTHTCAPCCCQDIVMLLVLK*TQHCRG Trigger: TCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAG...CATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGGCAGAATAGCTGCCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTCCAGAACACATCTGCAGCCTaGAATGTGTTTGTATCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QRQNSCQCEPSLLYTEFQNTSAA*NVFVSH Trigger: GTGGGATACAAACACATTGCAGGCTGCAGATGTGTT...CTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCAACTGCTACCAGACAGTGCTTGGTGGCTGCTGGGGACATGTGATGACTGTAAACACATCTGCAGCCTaGAATGTGTTTGTATCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SNCYQTVLGGCWGHVMTVNTSAA*NVFVSH Trigger: GTGGGATACAAACACATTGCAGGCTGCAGATGTGTT...TACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCGAGCTGAGAGCTTCCTaGGTCATACTTTCAGCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AESFLGHTFSSLDAHMKVELRAS*VILSAP Trigger: AGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTC...GACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CGTCACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTGGCTGTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: RHCCSRRPRMLGLTGIWLFFPLC*SRVSKH Trigger: ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAA...CAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCAGAATAGCTGCCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTCCAGGCTAAAAGTGGTCAGGGATTaGCTATGTGATACGATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GRIAASVSRVCSIQSSRLKVVRD*LCDTMF Trigger: GAACATCGTATCACATAGGCAATCCCTGACCACTTT...TAGCCTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCCACTGTAAAGTTCCTGGAAATTAGGCTGGAACACACAGCAGTCGACGCTCCCAAGCAAGAATATTaGAGTCCCTGCTTCCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: ASTVKFLEIRLEHTAVDAPKQEY*SPCFHC Trigger: ACAGTGGAAGCAGGGACTGCAATATTCTTGCTTGGG...AGCGTCGACTGCTGTGTGTTCCAGCCTAATTTCCAGGAACTTTACAGTGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCCCACACACAACACTGTCGTaGAAGTCTGATGGACAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ESFLGHTFSSLDAHMKVPHTTLS*KSDGQG Trigger: TCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTG...TGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCACTGTAAAGTTCCTGGAAATTAGGCTGGAACACACAGCAGTCGACGCTCACACAACACTGTCGTaGAAGTCTGATGGACAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ASTVKFLEIRLEHTAVDAHTTLS*KSDGQG Trigger: TCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTG...AGCGTCGACTGCTGTGTGTTCCAGCCTAATTTCCAGGAACTTTACAGTGGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCCAGACTTTAAGTCACAAAGTTGTACCTTGGGTCCTCTTGTTCCAACTGCTCCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: DPDFKSQSCTLGPLVPTAPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...AGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | AATACCTGCTACCAGACAGTGCTTGGTGGCTGCTGGGGACATGTGATGACTGTACAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: NTCYQTVLGGCWGHVMTVQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...TACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123182.8 |
||
| 3UTR-3UTR TCA 90 bp | CATACTTTCAGCTCCTTGGATGCACATATGAAGGTCCCAGCTGGGAATAACAAGAGTAAGCAAGCATCCTaGCGCTCTTCTCACATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HTFSSLDAHMKVPAGNNKSKQAS*RSSHIP Trigger: TGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACT...CTTGTTATTCCCAGCTGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTACAATCCAGCTGTCACTGTCCCTCAGTAATCACACTTTGACCTCCTCGGGTGCTCTGAACTGTGAATaGCTTCAAGACGGATATCAT | + |
|
Preference number: 2 (lower is better) Translates to: PTIQLSLSLSNHTLTSSGALNCE*LQDGYH Trigger: ATGATATCCGTCTTGAAGGCATTCACAGTTCAGAGC...ACCCGAGGAGGTCAAAGTGTGATTACTGAGGGACAGTGACAGCTGGATTGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGGCTTACACTCATACATGTGCACCTTGCTGTTGCCAAGATATAGTCATGGCTGTGCACCTTGCTGTTaGCAAGATATAGTCATGGCG | + |
|
Preference number: 2 (lower is better) Translates to: AGLHSYMCTLLLPRYSHGCAPCC*QDIVMA Trigger: CGCCATGACTATATCTTGGCAACAGCAAGGTGCACA...GCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGC 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GATTCAGCAGCTTGTGACTTTTTCCCATTATGCTGGTCAAGAGTAAGCAAGCATCCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: DSAACDFFPLCWSRVSKHPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTATTTGCCTTTTGATACCTACAATCCAGCTGTCACTGTCCCTCAGTAATCACCCCAGTGTCAGCCGCTaGCTTACACTCATACATGTG | + |
|
Preference number: 2 (lower is better) Translates to: PICLLIPTIQLSLSLSNHPSVSR*LTLIHV Trigger: CACATGTATGAGTGTAAGCCAGCGGCTGACACTGGG...GTGATTACTGAGGGACAGTGACAGCTGGATTGTAGGTATCAAAAGGCAAATAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAATATCCCAAAACTGTCGTGGAAGTCTaGTGGACAAGGAGCCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: QGIIHIDLILKHTGKYPKTVVEV*WTRSQG Trigger: GCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGT...TTTGGGATATTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | TTCATGAATAGAGTTTCAGTTAGAGAAGCCATTTCTCTCCGTGAGGTCACTTCAGTCAGGAGTCAGAGCTaGGAGCTTCCTGGGTCATAC | + |
|
Preference number: 2 (lower is better) Translates to: FMNRVSVREAISLREVTSVRSQS*ELPGSY Trigger: GTATGACCCAGGAAGCTCTCAGCTCTGACTCCTGAC...TGAAGTGACCTCACGGAGAGAAATGGCTTCTCTAACTGAAACTCTATTCATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGCGCTCAAGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: MRSRLSGELLNKSSGGRQQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...TTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGTTTTTGTGTATGTGATCTTCTTTCCTTTTAGCAGGGCTTCCACAGCTTCCGTCTATTTCTTGAACTaGGCACAGCTGTCCAGCGGT | + |
|
Preference number: 2 (lower is better) Translates to: QVFVYVIFFPFSRASTASVYFLN*AQLSSG Trigger: ACCGCTGGACAGCTGTGCTCAGTTCAAGAAATAGAC...GGAAGCTGTGGAAGCCCTGCTAAAAGGAAAGAAGATCACATACACAAAAACCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGCCTATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCCTGCTCGTGCTGAAGTaGACACAACACTGTCGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IAYVIRCSHCKMHEWLTFLLVLK*TQHCRG Trigger: TCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAG...GAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGCCTATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCCACCACCCTGGTGAATaGGCTCAAGGAGACAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: IAYVIRCSHCKMHEWLTFHHPGE*AQGDKF Trigger: GAACTTGTCTCCTTGAGCGCATTCACCAGGGTGGTG...GAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCAAAGTGGTCAGGGATTaGCTATGTGATACGATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: AESFLGHTFSSLDAHMKVKVVRD*LCDTMF Trigger: GAACATCGTATCACATAGGCAATCCCTGACCACTTT...GACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAACAAGTTTCTCTAATCCTCCTTGCTAAACTCCTCCCTGAAGGTGGGAAGCACACAACACTGTCGTaGAAGTCTGATGGACAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LQQVSLILLAKLLPEGGKHTTLS*KSDGQG Trigger: TCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTG...CTTCCCACCTTCAGGGAGGAGTTTAGCAAGGAGGATTAGAGAAACTTGTTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTTCCACTGTAAAGTTCCTGGAAATTAGGCTGGAACACACAGCAGTCGACGCTTTAACTTTCCCATTGTaGGCAGTGTTTGCTGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: ASTVKFLEIRLEHTAVDALTFPL*AVFADS Trigger: TGAATCAGCAAACACTGCTCACAATGGGAAAGTTAA...AGCGTCGACTGCTGTGTGTTCCAGCCTAATTTCCAGGAACTTTACAGTGGAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | AAACTGATGCGCTCAAGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGAACTTTACCTTGCTGTTaGCAAGATATAGTCATGGCG | + |
|
Preference number: 2 (lower is better) Translates to: KLMRSRLSGELLNKSSGGTLPCC*QDIVMA Trigger: CGCCATGACTATATCTTGGCAACAGCAAGGTAAAGT...TCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCGCATCAGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCTTCCATATGTTGAGGTACATACAACATAAATCCTTTGTCTGCATCGTGGAGAGCAAGCAGTCCTaGTCTCTCCCTGTACTAGTG | + |
|
Preference number: 2 (lower is better) Translates to: HSFHMLRYIQHKSFVCIVESKQS*SLPVLV Trigger: CACTAGTACAGGGAGAGAGCAGGACTGCTTGCTCTC...CACGATGCAGACAAAGGATTTATGTTGTATGTACCTCAACATATGGAAGCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTTTTTGTGTATGTGATCTTCTTTCCTTTTAGCAGGGCTTCCACAGCTTCCGTCTCTTGCTTTCTCTaGGCTCTGAACTGTGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: QVFVYVIFFPFSRASTASVSCFL*ALNCEC Trigger: GCATTCACAGTTCAGAGCCCAGAGAAAGCAAGAGAC...GGAAGCTGTGGAAGCCCTGCTAAAAGGAAAGAAGATCACATACACAAAAACCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTGCCTATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCTCCTGGAAATTAGGCTaGAACACACAGCAGTCGACG | + |
|
Preference number: 2 (lower is better) Translates to: IAYVIRCSHCKMHEWLTFSWKLG*NTQQST Trigger: CGTCGACTGCTGTGTGTTCCAGCCTAATTTCCAGGA...GAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAATATCCCAAACTGCTCGTGCTGAAGTaGACACAACACTGTCGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: QGIIHIDLILKHTGKYPKLLVLK*TQHCRG Trigger: TCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAG...TTTGGGATATTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GATCCAGACTTTAAGTCACAAAGTTGTACCTTGGGTCCTCTTGTTCCAACTGCTAACACATCTGCAGCCTaGAATGTGTTTGTATCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: DPDFKSQSCTLGPLVPTANTSAA*NVFVSH Trigger: GTGGGATACAAACACATTGCAGGCTGCAGATGTGTT...AGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTGGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGATTCAGCAGCTTGTGACTTTTTCCCATTATGCTGGTCAAGAGTAAGCAAGCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: ADSAACDFFPLCWSRVSKHKVVP*VLLFQL Trigger: CAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG...CTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: AESFLGHTFSSLDAHMKVFFPLC*SRVSKH Trigger: ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAA...GACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | CACAAAGTTGTACCTTGGGTCCTCTTGTTCCAACTGCAATGTGTTTGTATCCCACAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: HKVVPWVLLFQLQCVCIPQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...TGGGATACAAACACATTGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123138.2 |
||
| 3UTR-3UTR TCA 90 bp | TGCTGGTCAAGAGTAAGCAAGCATCCTGACGCTCTTCTCACATCCCATAATTTTCAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: CWSRVSKHPDALLTSHNFQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...AAAATTATGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACTCTTGACCAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTGATTCAGCAGCTTGTGACTTTTTCCCATTATGCTGGTCAAGAGTAAGCAAGCAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 2 (lower is better) Translates to: ADSAACDFFPLCWSRVSKQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...CTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATCAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | GATTTTGCTGAGTTTCACAGGAAGGAATTAAGACTGAGTGTAAGCTGCCCTCTGATACGATGTTCACACTaGAAGATGCATGAGTGGCTA | + |
|
Preference number: 2 (lower is better) Translates to: DFAEFHRKELRLSVSCPLIRCSH*KMHEWL Trigger: TAGCCACTCATGCATCTTGCAGTGTGAACATCGTAT...CAGAGGGCAGCTTACACTCAGTCTTAATTCCTTCCTGTGAAACTCAGCAAAATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTGCCTATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCCTGCATGGATTTTGCTaGGTTTCACAGGAAGGAATT | + |
|
Preference number: 2 (lower is better) Translates to: IAYVIRCSHCKMHEWLTFLHGFC*VSQEGI Trigger: AATTCCTTCCTGTGAAACTCAGCAAAATCCATGCAG...GAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR TCA 90 bp | AGTATATTTCAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAAGCCAGGGTTACATCGTaGGACACTGTCTCAAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: SIFQGIIHIDLILKHTGKARVTS*DTVSKP Trigger: TGGTTTTGAGACAGTGTCTCACGATGTAACCCTGGC...TTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTGAAATATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAATATCCCACACAACACTGTCGTaGAAGTCTGATGGACAAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ISGYHTHRSHFKAHREISHTTLS*KSDGQG Trigger: TCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTG...GGATATTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCAGTCAGACTCACTCAATCCATCCTGTCTCTATAAAGACTATAATAATATTCCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: PSQTHSIHPVSIKTIIIFHKVVP*VLLFQL Trigger: CAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG...GAATATTATTATAGTCTTTATAGAGACAGGATGGATTGAGTGAGTCTGACTGGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGTCAAGAGTAAGCAAGCATCCTGACGCTCTTCTCACATCCCATAATTTTACTTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: WSRVSKHPDALLTSHNFTFFPLC*SRVSKH Trigger: ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAA...AGTAAAATTATGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACTCTTGACCA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTATATTTCAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAACATACATGTGCACCTTaGTGTTGCCAAGATATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SIFQGIIHIDLILKHTGKHTCAP*CCQDIV Trigger: GACTATATCTTGGCAACAGCAAGGTGCACATGTATG...TTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTGAAATATACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152634.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGCTATCAACCTGTGTCTGTAGTATAGTACTTGGAACAGGTAGTAGCCATCAATCAATGGATAGATaGGTACTTTATATCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KLLSTCVCSIVLGTGSSHQSMDR*VLYIRA Trigger: TGCTCTGATATAAAGTACCCATCTATCCATTGATTG...ATGGCTACTACCTGTTCCAAGTACTATACTACAGACACAGGTTGATAGCAACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR GCA 72 bp | GCCGCTCTCCCGAGTGGACTGCGTACACAGCGATGGTaGTGCCGTGGGGAACAAACACAAACTCTGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: AALPSGLRTQRW*CRGEQTQTLSC Trigger: GCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | CGAGCCGCTCTCCCGAGTGGACTGCGTACACAGCGATaGTGCTGCCGTGGGGAACAAACACAAACTCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: RAALPSGLRTQR*CCRGEQTQTLS Trigger: GCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGCGGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 72 bp | AGCGATGGTGCTGCCGTGGGGAACAAACACAAACTCTaGGCTGCAGCCACAGGAGACAGCGAACTGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SDGAAVGNKHKL*AAATGDSELQP Trigger: GGGCTGCAGTTCGCTGTCTCCTGTGGCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | GCTCTCCCGAGTGGACTGCGTACACAGCGATGGTGCTaGCGTGGGGAACAAACACAAACTCTGAGCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALPSGLRTQRWC*RGEQTQTLSCS Trigger: GCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | AAGGAGCCAGGGCTGACAGTCACCCATCCTCGTCACTaGTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACT | + |
|
Preference number: 3 (lower is better) Translates to: KEPGLTVTHPRH*CSRRPRMLGLT Trigger: AGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACGAGGATGGGTGACTGTCAGCCCTGGCTCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | CCCGAGTGGACTGCGTACACAGCGATGGTGCTGCCGTaGGGAACAAACACAAACTCTGAGCTGCAGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: PEWTAYTAMVLP*GTNTNSELQPQ Trigger: CTGTGGCTGCAGCTCAGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGCTGTGTACGCAGTCCACTCGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | TGCGTACACAGCGATGGTGCAGGGTGTTGTCCCCGCTaGAGCTATTCCAGAGGCGCATTCGGTTGTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CVHSDGAGCCPR*SYSRGAFGCLC Trigger: GCACAGACAACCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGCACCATCGCTGTGTACGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000142931.8 |
||
| 3UTR TCA 72 bp | GGAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTaGGCATGGCGAGCCGCTCTCCCGAGTGGACTGCGT | + |
|
Preference number: 3 (lower is better) Translates to: GTHSSRRFCNVP*AWRAALPSGLR Trigger: ACGCAGTCCACTCGGGAGAGCGGCTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTGGAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTGAGCATGGCGAGGCTACCAGACAGTGCTaGGTGGCTGCTGGGGACATG | + |
|
Preference number: 3 (lower is better) Translates to: RLEHTAVDAFVMSLEHGEATRQC*VAAGDM Trigger: CATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGC...CTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTCCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 72 bp | GAAGGGCAGGCTGGCAGCACAGTCAGGAGTCAGAGCTaGGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EGQAGSTVRSQS*ELPGSYFQLLG Trigger: TCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCTGACTCCTGACTGTGCTGCCAGCCTGCCCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | ACACCTTCCCATAGTTCACCAGGGTGTTGTCCCCGCTaGAGCTATTCCAGAGGCGCATTCGGTTGTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TPSHSSPGCCPR*SYSRGAFGCLC Trigger: GCACAGACAACCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGGTGAACTATGGGAAGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | AGCAGAGGCAGAATAGCTGCCAGTGTGAGCCGAGTCTaGTCTATACAGAGTTCCAGGCTAGTCCAGGCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SRGRIAASVSRV*SIQSSRLVQAS Trigger: GCTAGCCTGGACTAGCCTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTGCT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | TCTAACCCCAGCACCTGGGAGCAGAGGCAGAATAGCTaGCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SNPSTWEQRQNS*QCEPSLLYTEF Trigger: GAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTGCTCCCAGGTGCTGGGGTTAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | GAGCACAGGTTCCCTGAAAAGCCAGCTGCAGCTGTGTaGTTCTGTAACTCCAGAGCTGGGCAGAGGAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: EHRFPEKPAAAV*FCNSRAGQRRT Trigger: TGTTCTCCTCTGCCCAGCTCTGGAGTTACAGAAGCACACAGCTGCAGCTGGCTTTTCAGGGAACCTGTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR CCA 72 bp | CTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTaGGATTTGGCTGGAGCTTCATCGTCATCATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLLQASANAGFN*DLAGASSSSSG Trigger: TCCTGATGATGACGATGAAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | AACCCTGCTCGTGCTGAAGTGCACACAACACTGTCGTaGAAGTCTGATGGACAAGGAGCCAGGGCTGACAGT | + |
|
Preference number: 3 (lower is better) Translates to: NPARAEVHTTLS*KSDGQGARADS Trigger: ACTGTCAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | AATCCAGTGGAGGACGACAACCCCAGTGTCAGCCGCTaGCTTACACTCATACATGTGCACCTTGCTGTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: NPVEDDNPSVSR*LTLIHVHLAVA Trigger: GGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACTGGGGTTGTCGTCCTCCACTGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | CGTCACTGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTGGCTGCAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RHCCSRRPRMLGLTGIWLQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...CAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCAGTGACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCCGATGGTGCAGGGTGTaGTCCCCGCTGGAGCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: AESFLGHTFSSLDAHMKVRWCRV*SPLELF Trigger: GAATAGCTCCAGCGGGGACAACACCCTGCACCATCG...GACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| 3UTR CCA 72 bp | TCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTaGCTGGAGCTTCATCGTCATCATCAGGAACTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SRRPRMLGLTGI*LELHRHHQELA Trigger: AGCCAGTTCCTGATGATGACGATGAAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | AAGCCATTTCTCTCCGTGAGGTCACTTCACTTTAGCTaGGCAGCGAAGGCTCTGCGCACTCACTTCTCTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KPFLSVRSLHFS*AAKALRTHFSD Trigger: GTCAGAGAAGTGAGTGCGCAGAGCCTTCGCTGCCCAGCTAAAGTGAAGTGACCTCACGGAGAGAAATGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR TCA 72 bp | ATGCCTTCAAGACGGATATCATGCAAAGGAGGGCACTaGGCAGACAGTTCACAGATAGAGCCTGCAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: MPSRRISCKGGH*ADSSQIEPAAC Trigger: GCAGGCTGCAGGCTCTATCTGTGAACTGTCTGCTCAGTGCCCTCCTTTGCATGATATCCGTCTTGAAGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR GCA 72 bp | ACCCCAGTGTCAGCCGCTGGCTTACACTCATACATGTaGACCTTGCTGTTGCCAAGATATAGTCATGGCGTG | + |
|
Preference number: 3 (lower is better) Translates to: TPVSAAGLHSYM*TLLLPRYSHGV Trigger: CACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCTGCAGCCACAGGAGACAGCGAACTGCAGCCCTTTCCTGCTGTCATTACACCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT | + |
|
Preference number: 3 (lower is better) Translates to: ELQPQETANCSPFLLSLHLYCQH*LLPRYS Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...GTGTAATGACAGCAGGAAAGGGCTGCAGTTCGCTGTCTCCTGTGGCTGCAGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTGAGCATGGCGAGCCGCTCATGTGCACCTTGCTGTaGCCAAGATATAGTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: EHTAVDAFVMSLEHGEPLMCTLL*PRYSHG Trigger: GCCATGACTATATCTTGGCAACAGCAAGGTGCACAT...GAGCGGCTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCGCTCAAGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAAGTACCTTGGGTCCTCTaGTTCCAACTGCTACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: MRSRLSGELLNKSSGGRQVPWVL*FQLLPD Trigger: GTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTAC...TTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCTTGAGCGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGACAGTCACCCATCACAAAGTTGTACCTaGGGTCCTCTTGTTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: TTLSWKSDGQGARADSHPSQSCT*GPLVPT Trigger: AGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGA...TGGGTGACTGTCAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCCAGTGTCAGCCGATGTGCACCTTGCTGTaGCCAAGATATAGTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SGELLNKSSGGRQPQCQPMCTLL*PRYSHG Trigger: GCCATGACTATATCTTGGCAACAGCAAGGTGCACAT...CGGCTGACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 72 bp | GAGCAAGCAGTCCTGCTCTCTCCCTGTACTAGTGCCTaGAGGTCTGTAGGCAGTGATCTTTCCTTCTACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EQAVLLSPCTSA*RSVGSDLSFYR Trigger: TCTGTAGAAGGAAAGATCACTGCCTACAGACCTTCAGGCACTAGTACAGGGAGAGAGCAGGACTGCTTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR TCA 72 bp | GGCTTGGCAGAGAGCATCTTCCCCTGCCATCTTGCCTaGCCTATTTGCCTTTTGATACCTACAATCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLAESIFPCHLA*PICLLIPTIQL Trigger: CAGCTGGATTGTAGGTATCAAAAGGCAAATAGGTCAGGCAAGATGGCAGGGGAAGATGCTCTCTGCCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR-3UTR CAA 90 bp | CGAGTCTGCTCTATACAGAGTTCCAGGCTAGTCCAGGCTAGCCAGGGTTACATCTCACAAAGTTGTACCTaGGGTCCTCTTGTTCCAACT | + |
|
Preference number: 3 (lower is better) Translates to: RVCSIQSSRLVQASQGYISQSCT*GPLVPT Trigger: AGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGA...GATGTAACCCTGGCTAGCCTGGACTAGCCTGGAACTCTGTATAGAGCAGACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | ACAATAACGGGAAGAACAACCCTGCTCGTGCTGAAGTaGACACAACACTGTCGTGGAAGTCTGATGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: TITGRTTLLVLK*TQHCRGSLMDK Trigger: CTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAGGGTTGTTCTTCCCGTTATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | GTCCTCTTGTTCCAACTGCTACCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGATGACTGTAAACTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLLFQLLPDSAW*LLGTCDDCKLF Trigger: AAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | AGTGTCAGCCGCTGGCTTACACTCATACATGTGCACCTTGCTGTTGCCAAGATACAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVSRWLTLIHVHLAVAKIQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...TATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCATCAGGAACTGGCTCATAGGAAGGTGGTACCCAAGCAAGAATATTGCAGTCGTACCTTGGGTCCTCTaGTTCCAACTGCTACCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IIRNWLIGRWYPSKNIAVVPWVL*FQLLPD Trigger: GTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTAC...GACTGCAATATTCTTGCTTGGGTACCACCTTCCTATGAGCCAGTTCCTGATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000123657.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 72 bp | CTAGAGAGTCTCTTGCTTTCTCTGGGCTCTGAACTGTaGATGCCTTCAAGACGGATATCATGCAAAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: LESLLLSLGSEL*MPSRRISCKGG Trigger: CCCTCCTTTGCATGATATCCGTCTTGAAGGCATTCACAGTTCAGAGCCCAGAGAAAGCAAGAGACTCTCTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR TCA 72 bp | CTGTGGCTGGGTATAGCTGTAGTCTATTTCTTGAACTaGGCACAGCTGTCCAGCGGTCCTATGTACTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: LWLGIAVVYFLN*AQLSSGPMYCN Trigger: GTTACAGTACATAGGACCGCTGGACAGCTGTGCTCAGTTCAAGAAATAGACTACAGCTATACCCAGCCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR TCA 72 bp | TCTTCCCCTGCCATCTTGCCTGACCTATTTGCCTTTTaGTACCTACAATCCAGCTGTCACTGTCCCTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: SSPAILPDLFAF*YLQSSCHCPSV Trigger: TACTGAGGGACAGTGACAGCTGGATTGTAGGTATCAAAAGGCAAATAGGTCAGGCAAGATGGCAGGGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR CCA 72 bp | TGTTCCAACTGCTACCAGACAGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTAAACTGTTTCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: CSNCYQTVLGGC*GHVMTVNCFLK Trigger: TTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | TTCATCGTCATCATCAGGAACTGGCTCATAGGAAGGTaGTACCCAAGCAAGAATATTGCAGTCCCTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FIVIIRNWLIGR*YPSKNIAVPAS Trigger: GGAAGCAGGGACTGCAATATTCTTGCTTGGGTACCACCTTCCTATGAGCCAGTTCCTGATGATGACGATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | TATAAAAATACCTGCTACCAGACAGTGCTTGGTGGCTGCTGGGGACATGTGATGCAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YKNTCYQTVLGGCWGHVMQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...CATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGGTATTTTTATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123182.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTGCCAAGATATAGTCATGGCGTGGTGACCAGGAAACTGCCAAGATTTCCTGTACCTTGGGTCCTCTaGTTCCAACTGCAATGTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPRYSHGVVTRKLPRFPVPWVL*FQLQCV Trigger: AACACATTGCAGTTGGAACAAGAGGACCCAAGGTAC...AGGAAATCTTGGCAGTTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123138.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGCTCAGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCCAGTGTTCATACATGTGCACCTaGCTGTTGCCAAGATATAGT | + |
|
Preference number: 3 (lower is better) Translates to: RLSGELLNKSSGGRQPQCSYMCT*LLPRYS Trigger: ACTATATCTTGGCAACAGCAAGGTGCACATGTATGA...ACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACTGAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCAGCTCCTTGGATGCACATATGAAGGTCCCAGCTGGGAATAACAAGTCTTGTCAGCACTTGCTGTaGCCAAGATATAGTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TFSSLDAHMKVPAGNNKSCQHLL*PRYSHG Trigger: GCCATGACTATATCTTGGCAACAGCAAGTGCTGACA...AGACTTGTTATTCCCAGCTGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR-3UTR CAA 90 bp | TACATGTGCACCTTGCTGTTGCCAAGATATAGTCATGGCGTGGTGACCAGGAAACCAACTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YMCTLLLPRYSHGVVTRKPTAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGTTGG...TTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123138.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAACAAACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACCTCATGTGCACCTTGCTGTaGCCAAGATATAGTCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: NETNNHTHVQEGPRGIHLMCTLL*PRYSHG Trigger: GCCATGACTATATCTTGGCAACAGCAAGGTGCACAT...GAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGTTTGTTTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152634.8 |
||
| 3UTR TCA 72 bp | TCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATaGAGGTCCCAGCTGGGAATAACAAGTCTGTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SWVILSAPWMHI*RSQLGITSLFL Trigger: CAAGAACAGACTTGTTATTCCCAGCTGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | GCTGATTCAGCAGCTTGTGACTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCATCCTGACGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ADSAACDFFPLC*SRVSKHPDALL Trigger: GAGAAGAGCGTCAGGATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000123138.2 ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | AACAGGATCCAGACTTTAAGTCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTGCTACCAGACAGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: NRIQTLSHKVVP*VLLFQLLPDSA Trigger: AGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTGGATCCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | AAAAATACCTGCTACCAGACAGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTAAACTGTTTCCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: KNTCYQTVLGGC*GHVMTVNCFLK Trigger: TTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGGTATTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123182.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGTGGCTGCTGGGGACATGTGATGACTGTAAACTGTTTCCTCAAAATTAAACAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGGCWGHVMTVNCFLKIKQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...TTTAATTTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000123182.8 ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR GCA 72 bp | TGGTCAGGGATTGCCTATGTGATACGATGTTCACACTaGAAGATGCATGAGTGGCTAACATTCAATATGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WSGIAYVIRCSH*KMHEWLTFNMR Trigger: CCTCATATTGAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAATCCCTGACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CCA 72 bp | TATGTGATACGATGTTCACACTGCAAGATGCATGAGTaGCTAACATTCAATATGAGGGAGAAGAGGCTCGAT | + |
|
Preference number: 3 (lower is better) Translates to: YVIRCSHCKMHE*LTFNMREKRLD Trigger: ATCGAGCCTCTTCTCCCTCATATTGAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTCAGCAGCTTGTGACTTTTTCCCATTATGCTGGTCAAGAGTAAGCAAGCATTCATACATGTGCACCTaGCTGTTGCCAAGATATAGT | + |
|
Preference number: 3 (lower is better) Translates to: DSAACDFFPLCWSRVSKHSYMCT*LLPRYS Trigger: ACTATATCTTGGCAACAGCAAGGTGCACATGTATGA...ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR TCA 72 bp | TTTCCTTTTAGCAGGGCTTCCACAGCTTCCATATGTTaGGGTACATACAACATAAATCCTTTGTCTGCATCG | + |
|
Preference number: 3 (lower is better) Translates to: FPFSRASTASIC*GTYNINPLSAS Trigger: CGATGCAGACAAAGGATTTATGTTGTATGTACCTCAACATATGGAAGCTGTGGAAGCCCTGCTAAAAGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR CCA 72 bp | AACAGGATCCAGACTTTAAGTCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTGCAATGTGTTTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: NRIQTLSHKVVP*VLLFQLQCVCI Trigger: GATACAAACACATTGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTGGATCCTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123138.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTATTTGCCTTTTGATACCTACAATCCAGCTGTCACTGTCCCTCAGTAATCACGTAAAGCCAAATAAATaGCACTTTACCTTGCTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: PICLLIPTIQLSLSLSNHVKPNK*HFTLLL Trigger: CAACAGCAAGGTAAAGTGCAATTTATTTGGCTTTAC...GTGATTACTGAGGGACAGTGACAGCTGGATTGTAGGTATCAAAAGGCAAATAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR TCA 72 bp | CACAAAGAATGGAGGAGACTTCATAACAATCACTCCTaGGTTGACACAAGGAAAGGAAAGAACAATTGTATG | + |
|
Preference number: 3 (lower is better) Translates to: HKEWRRLHNNHS*VDTRKGKNNCM Trigger: CATACAATTGTTCTTTCCTTTCCTTGTGTCAACTCAGGAGTGATTGTTATGAAGTCTCCTCCATTCTTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR GCA 72 bp | CTTGATCTCTCTGTTGACTTAACAACTAGCACAGAATaGACCAGTCACGTCATTTACAAAGAACACATTGTT | + |
|
Preference number: 3 (lower is better) Translates to: LDLSVDLTTSTE*TSHVIYKEHIV Trigger: AACAATGTGTTCTTTGTAAATGACGTGACTGGTGCATTCTGTGCTAGTTGTTAAGTCAACAGAGAGATCAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| 3UTR GCA 72 bp | ACAATTGTATGGCATTTCATGTTTAATCTACATCCCTaGATGGATTTTGCTGAGTTTCACAGGAAGGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: TIVWHFMFNLHP*MDFAEFHRKEL Trigger: TAATTCCTTCCTGTGAAACTCAGCAAAATCCATGCAGGGATGTAGATTAAACATGAAATGCCATACAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| 3UTR CAA 72 bp | CCTGCAGCCTGCAGCCTGCAGCACGAGGGTGAGGGCTaGAGCACAGGTTCCCTGAAAAGCCAGCTGCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PAACSLQHEGEG*STGSLKSQLQL Trigger: CAGCTGCAGCTGGCTTTTCAGGGAACCTGTGCTCAAGCCCTCACCCTCGTGCTGCAGGCTGCAGGCTGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| 3UTR CAA 72 bp | CCGAGTGGACTGCGTACACAGCGATGGTGCAGGGTGTaGTCCCCGCTGGAGCTATTCCAGAGGCGCATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGLRTQRWCRV*SPLELFQRRIR Trigger: CCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGCACCATCGCTGTGTACGCAGTCCACTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133957.8 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | TCCCAGCTGGGAATAACAAGTCTGTTCTTGGGCTGTGCCCGTAGGGGCTGGCCCCCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGITSLFLGCARRGWPPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...GGGCCAGCCCCTACGGGCACAGCCCAAGAACAGACTTGTTATTCCCAGCTGGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR GCA 90 bp | CAGCGATGGTGCAGGGTGTTGTCCCCGCTGGAGCTATTCCAGAGGCGCATTCGGGCCAACGGAACACACTaGTTTACATGTGTAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QRWCRVLSPLELFQRRIRANGTH*FTCVMG Trigger: CCCCATTACACATGTAAAGCAGTGTGTTCCGTTGGC...CCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGCACCATCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| 3UTR CAA 72 bp | CTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTaGGCTGGAGCTTCATCGTCATCATCAGGAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQASANAGFNWD*AGASSSSSGTG Trigger: GCCAGTTCCTGATGATGACGATGAAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS-3UTR GCA 90 bp | ACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGACAGTCACCCAACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: TTLSWKSDGQGARADSHPTVLGG*WGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGT...TGGGTGACTGTCAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGTCAGAGCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCAACTGCTACCAGACAGTaGTTGGTGGCTGCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SGVRAESFLGHTFSSLDATATRQ*LVAAGD Trigger: GTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGT...TGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCTGACTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | GAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTGAGCATGGCGAGCCGCTCGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EHTAVDAFVMSLEHGEPLVLGGC*GHVMTV Trigger: TACAGTCATCACATGTCCCCAGCAGCCACCAAGCAC...GAGCGGCTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | ACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCCTACCAGACAGTGCTTaGTGGCTGCTGGGGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: TITHMYRRGHVVYTSNPSLPDSA*WLLGTC Trigger: ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAG...GCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGCGATGGTGCTGCCGTaGGGAACAAACACAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AEVHTTLSWKSDGQGARAAMVLP*GTNTNS Trigger: AGAGTTTGTGTTTGTTCCCCACGGCAGCACCATCGC...AGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR TCA 90 bp | TGCTGCTCCAGGCGTCCGCGAATGCTGGGTTTAACTGGGATTTGGCTGGAGCTTAAGATTTCCTGTCTGTaGCCTTGGGTCCTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCSRRPRMLGLTGIWLELKISCL*PWVLLF Trigger: GAACAAGAGGACCCAAGGTCACAGACAGGAAATCTT...AAGCTCCAGCCAAATCCCAGTTAAACCCAGCATTCGCGGACGCCTGGAGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCTTCCACTGTAAAGTTCCTGGAAATTAGGCTGGAACACACAGCAGTCGACACTGCTACCAGACAGTaGTTGGTGGCTGCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: PASTVKFLEIRLEHTAVDTATRQ*LVAAGD Trigger: GTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGT...GTCGACTGCTGTGTGTTCCAGCCTAATTTCCAGGAACTTTACAGTGGAAGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR GCA 90 bp | ACACACATGTACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCACCTGGGTCAGCACTTGCTGTTaGCAAGATATAGTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: THMYRRGHVVYTSNPSTWVSTCC*QDIVMA Trigger: CGCCATGACTATATCTTGGCAACAGCAAGTGCTGAC...CCAGGTGCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGCTATTCCAGAGGCGCATTCGGTTGTCTGTGCCAATGGTGAGCAGGTGTTAACCCCACTGCCATaGATTCTTTCCACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGAIPEAHSVVCANGEQVLTPLP*ILSTSL Trigger: CAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAA...CACCTGCTCACCATTGGCACAGACAACCGAATGCGCCTCTGGAATAGCTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| 3UTR CAA 72 bp | GTGTCAGCCGCTGGCTTACACTCATACATGTGCACCTaGCTGTTGCCAAGATATAGTCATGGCGTGGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: VSAAGLHSYMCT*LLPRYSHGVVT Trigger: GGTCACCACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| CDS-3UTR TCA 90 bp | CAGAGGCAGAATAGCTGCCAGTGTGAGCCGAGTCTGCTCTATACAGAGTTCCAGAGTAAGCAAGCATCCTaGCGCTCTTCTCACATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRQNSCQCEPSLLYTEFQSKQAS*RSSHIP Trigger: TGGGATGTGAGAAGAGCGTCAGGATGCTTGCTTACT...CTGGAACTCTGTATAGAGCAGACTCGGCTCACACTGGCAGCTATTCTGCCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR CCA 90 bp | CTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCAGGGCTGTTAACCCCACTGCCATaGATTCTTTCCACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LKCTQHCRGSLMDKEPGLLTPLP*ILSTSL Trigger: CAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAA...CAGCCCTGGCTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS-3UTR CCA 90 bp | ACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCAATGGGGCTGTCTGCTaGCGTTCTCAAGGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: TITHMYRRGHVVYTSNPSNGAVC*RSQGHR Trigger: TCTATGACCTTGAGAACGCCAGCAGACAGCCCCATT...GCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | CGAGTCTGCTCTATACAGAGTTCCAGGCTAGTCCAGGCTAGCCAGGGTTACATCAATGGGGCTGTCTGCTaGCGTTCTCAAGGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVCSIQSSRLVQASQGYINGAVC*RSQGHR Trigger: TCTATGACCTTGAGAACGCCAGCAGACAGCCCCATT...GATGTAACCCTGGCTAGCCTGGACTAGCCTGGAACTCTGTATAGAGCAGACTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTCGTGCTGAAGTGCACACAACACTGTCGTGGAAGTCTGATGGACAAGGAGCCCAAGCAAGAATATTaGAGTCCCTGCTTCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLKCTQHCRGSLMDKEPKQEY*SPCFHC Trigger: ACAGTGGAAGCAGGGACTGCAATATTCTTGCTTGGG...CTCCTTGTCCATCAGACTTCCACGACAGTGTTGTGTGCACTTCAGCACGAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCCCAGAGCACGGCTTCATCACTTTCTCCCTAACCTTACTGAGGAGAAGAATGGGGCTGTCTGCTaGCGTTCTCAAGGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLPRARLHHFLPNLTEEKNGAVC*RSQGHR Trigger: TCTATGACCTTGAGAACGCCAGCAGACAGCCCCATT...CTTCTCCTCAGTAAGGTTAGGGAGAAAGTGATGAAGCCGTGCTCTGGGCAAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGTCAGAGCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCATCCTGGAAATTAGGCTaGAACACACAGCAGTCGACG | + |
|
Preference number: 4 (lower is better) Translates to: SGVRAESFLGHTFSSLDASWKLG*NTQQST Trigger: CGTCGACTGCTGTGTGTTCCAGCCTAATTTCCAGGA...TGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCTGACTCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| 3UTR CAA 72 bp | GCCGCTGGCTTACACTCATACATGTGCACCTTGCTGTaGCCAAGATATAGTCATGGCGTGGTGACCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: AAGLHSYMCTLL*PRYSHGVVTRK Trigger: TTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| CDS-3UTR GCA 90 bp | ACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCAACACATCTGCAGCCTaGAATGTGTTTGTATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TITHMYRRGHVVYTSNPSNTSAA*NVFVSH Trigger: GTGGGATACAAACACATTGCAGGCTGCAGATGTGTT...GCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | TCCTTGCCCAGAGCACGGCTTCATCACTTTCTCCCTAACCTTACTGAGGAGAAGTTAACCCCACTGCCATaGATTCTTTCCACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLPRARLHHFLPNLTEEKLTPLP*ILSTSL Trigger: CAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAA...CTTCTCCTCAGTAAGGTTAGGGAGAAAGTGATGAAGCCGTGCTCTGGGCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| 3UTR CAA 72 bp | AGAGCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTaGGATGCACATATGAAGGTCCCAGCTGGGAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: RAESFLGHTFSS*DAHMKVPAGNN Trigger: GTTATTCCCAGCTGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS-3UTR GCA 90 bp | TCCTTGCCCAGAGCACGGCTTCATCACTTTCTCCCTAACCTTACTGAGGAGAAGAACACATCTGCAGCCTaGAATGTGTTTGTATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLPRARLHHFLPNLTEEKNTSAA*NVFVSH Trigger: GTGGGATACAAACACATTGCAGGCTGCAGATGTGTT...CTTCTCCTCAGTAAGGTTAGGGAGAAAGTGATGAAGCCGTGCTCTGGGCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCAGCCGCTGGCTTACACTCATACATGTGCACCTTGCTGTTGCCAAGATATTAACCCCACTGCCATaGATTCTTTCCACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SVSRWLTLIHVHLAVAKILTPLP*ILSTSL Trigger: CAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAA...TATCTTGGCAACAGCAAGGTGCACATGTATGAGTGTAAGCCAGCGGCTGACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000123138.2 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CAA 72 bp | CAGACTTTAAGTCACAAAGTTGTACCTTGGGTCCTCTaGTTCCAACTGCTACCAGACAGTGCTTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QTLSHKVVPWVL*FQLLPDSAWWL Trigger: CAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| 3UTR CAA 72 bp | AGAGAGCATCTTCCCCTGCCATCTTGCCTGACCTATTaGCCTTTTGATACCTACAATCCAGCTGTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REHLPLPSCLTY*PFDTYNPAVTV Trigger: GACAGTGACAGCTGGATTGTAGGTATCAAAAGGCAAATAGGTCAGGCAAGATGGCAGGGGAAGATGCTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| CDS-3UTR TCA 90 bp | ACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCTTAACTTTCCCATTGTaGGCAGTGTTTGCTGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TITHMYRRGHVVYTSNPSLTFPL*AVFADS Trigger: TGAATCAGCAAACACTGCTCACAATGGGAAAGTTAA...GCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR GCA 90 bp | ACTAGCACAGAATGCACCAGTCACGTCATTTACAAAGAACACATTGTTAGCAACACTGCTACCAGACAGTaGTTGGTGGCTGCTGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSTECTSHVIYKEHIVSNTATRQ*LVAAGD Trigger: GTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGT...GTTGCTAACAATGTGTTCTTTGTAAATGACGTGACTGGTGCATTCTGTGCTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTCAGCTCCTTGGATGCACATATGAAGGTCCCAGCTGGGAATAACAAGTCTACTGCAGCCCTTTCCTaGTGTCATTACACACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFSSLDAHMKVPAGNNKSTAALS*CHYTPS Trigger: GGAAGGTGTGTAATGACAGCAGGAAAGGGCTGCAGT...AGACTTGTTATTCCCAGCTGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR CCA 90 bp | CAGAAGGACCTTGATCTCTCTGTTGACTTAACAACTAGCACAGAATGCACCAGTGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QKDLDLSVDLTTSTECTSVLGGC*GHVMTV Trigger: TACAGTCATCACATGTCCCCAGCAGCCACCAAGCAC...ACTGGTGCATTCTGTGCTAGTTGTTAAGTCAACAGAGAGATCAAGGTCCTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTCCTCTGAGCTCCCCTTGCAGTCACTGCTCATAGAAAAGTCTCAACAGCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LSSSELPLQSLLIEKSQQHKVVP*VLLFQL Trigger: CAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG...CTGTTGAGACTTTTCTATGAGCAGTGACTGCAAGGGGAGCTCAGAGGAACTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGGATTTTGCTGAGTTTCACAGGAAGGAATTAAGACTGAGTGTAAGCTGCACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: CMDFAEFHRKELRLSVSCTVLGG*WGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGT...GCAGCTTACACTCAGTCTTAATTCCTTCCTGTGAAACTCAGCAAAATCCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | TGCATGGATTTTGCTGAGTTTCACAGGAAGGAATTAAGACTGAGTGTAAGCTGCGTGCTTGGTGGCTGCTaGGGACATGTGATGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: CMDFAEFHRKELRLSVSCVLGGC*GHVMTV Trigger: TACAGTCATCACATGTCCCCAGCAGCCACCAAGCAC...GCAGCTTACACTCAGTCTTAATTCCTTCCTGTGAAACTCAGCAAAATCCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAGTCTCAACAGCGCAGTTTTACAAGAATAATGCACAGAAGGACCTTGATCCCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EKSQQRSFTRIMHRRTLIPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...GATCAAGGTCCTTCTGTGCATTATTCTTGTAAAACTGCGCTGTTGAGACTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CCA 90 bp | ACTAGCACAGAATGCACCAGTCACGTCATTTACAAAGAACACATTGTTAGCAACCTACCAGACAGTGCTTaGTGGCTGCTGGGGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: TSTECTSHVIYKEHIVSNLPDSA*WLLGTC Trigger: ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAG...GTTGCTAACAATGTGTTCTTTGTAAATGACGTGACTGGTGCATTCTGTGCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| 3UTR CAA 72 bp | GAACAGGATCCAGACTTTAAGTCACAAAGTTGTACCTaGGGTCCTCTTGTTCCAACTGCTACCAGACAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQDPDFKSQSCT*GPLVPTATRQC Trigger: GCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTGGATCCTGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| CDS-3UTR TCA 90 bp | ATTGCCTATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCAACAAACACAAACTCTaGGCTGCAGCCACAGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IAYVIRCSHCKMHEWLTFNKHKL*AAATGD Trigger: GTCTCCTGTGGCTGCAGCTCAGAGTTTGTGTTTGTT...GAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATAGGCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTCTCAACAGCGCAGTTTTACAAGAATAATGCACAGAAGGACCTTGATCACAGTGCTTGGTGGCTaGTGGGGACATGTGATGACT | + |
|
Preference number: 4 (lower is better) Translates to: EKSQQRSFTRIMHRRTLITVLGG*WGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGT...GATCAAGGTCCTTCTGTGCATTATTCTTGTAAAACTGCGCTGTTGAGACTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR GCA 90 bp | AACAATGAAACAAACAATCACACACATGTACAGGAGGGGCCACGTGGTATACACGTCAGCACTTGCTGTTaGCAAGATATAGTCATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: NNETNNHTHVQEGPRGIHVSTCC*QDIVMA Trigger: CGCCATGACTATATCTTGGCAACAGCAAGTGCTGAC...GTGTATACCACGTGGCCCCTCCTGTACATGTGTGTGATTGTTTGTTTCATTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | TTGCAACAAGTTTCTCTAATCCTCCTTGCTAAACTCCTCCCTGAAGGTGGGAAGCACAAAGTTGTACCTTaGGTCCTCTTGTTCCAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQVSLILLAKLLPEGGKHKVVP*VLLFQL Trigger: CAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTG...CTTCCCACCTTCAGGGAGGAGTTTAGCAAGGAGGATTAGAGAAACTTGTTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| 3UTR CAA 72 bp | TACAAGGAAAAGTATCAGAGGACAACTTATGTGAGCTaGTATTCTCCTCTCTGGCGGCTTGGCAGAGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: YKEKYQRTTYVS*YSPLWRLGREH Trigger: ATGCTCTCTGCCAAGCCGCCAGAGAGGAGAATACAAGCTCACATAAGTTGTCCTCTGATACTTTTCCTTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129117.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGGATTTTGCTGAGTTTCACAGGAAGGAATTAAGACTGAGTGTAAGCTGCGCCAACGGAACACACTaGTTTACATGTGTAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CMDFAEFHRKELRLSVSCANGTH*FTCVMG Trigger: CCCCATTACACATGTAAAGCAGTGTGTTCCGTTGGC...GCAGCTTACACTCAGTCTTAATTCCTTCCTGTGAAACTCAGCAAAATCCATGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGTGGCTGCTGGGGACATGTGATGACTGTAAACTGTTTCCTCAAAATTAAATTAACCCCACTGCCATaGATTCTTTCCACATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGCWGHVMTVNCFLKIKLTPLP*ILSTSL Trigger: CAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAA...TTTAATTTTGAGGAAACAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000123182.8 ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| CDS-3UTR CCA 90 bp | CAACAAGTTTCTCTAATCCTCCTTGCTAAACTCCTCCCTGAAGGTGGGAAGGGCTTTTTCCCATTATGCTaGTCAAGAGTAAGCAAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: QQVSLILLAKLLPEGGKGFFPLC*SRVSKH Trigger: ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAA...GCCCTTCCCACCTTCAGGGAGGAGTTTAGCAAGGAGGATTAGAGAAACTTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR GCA 90 bp | GAAAAGTCTCAACAGCGCAGTTTTACAAGAATAATGCACAGAAGGACCTTGATCGCCAACGGAACACACTaGTTTACATGTGTAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKSQQRSFTRIMHRRTLIANGTH*FTCVMG Trigger: CCCCATTACACATGTAAAGCAGTGTGTTCCGTTGGC...GATCAAGGTCCTTCTGTGCATTATTCTTGTAAAACTGCGCTGTTGAGACTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CCA 90 bp | AGTATATTTCAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAACCAGACAGTGCTTGGTaGCTGCTGGGGACATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFQGIIHIDLILKHTGKPDSAW*LLGTCD Trigger: ATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGG...TTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTGAAATATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CCA 90 bp | AGTATATTTCAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAACTACCAGACAGTGCTTaGTGGCTGCTGGGGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: SIFQGIIHIDLILKHTGKLPDSA*WLLGTC Trigger: ACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAG...TTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTGAAATATACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| 3UTR CAA 72 bp | CAGACTTTAAGTCACAAAGTTGTACCTTGGGTCCTCTaGTTCCAACTGCAATGTGTTTGTATCCCACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QTLSHKVVPWVL*FQLQCVCIPHF Trigger: AAAGTGTGGGATACAAACACATTGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123138.2 |
||
| 3UTR CAA 72 bp | GAACAGGATCCAGACTTTAAGTCACAAAGTTGTACCTaGGGTCCTCTTGTTCCAACTGCAATGTGTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: EQDPDFKSQSCT*GPLVPTAMCLY Trigger: ATACAAACACATTGCAGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGACTTAAAGTCTGGATCCTGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123138.2 |
||
| CDS-3UTR TCA 90 bp | GAAAAGTCTCAACAGCGCAGTTTTACAAGAATAATGCACAGAAGGACCTTGATCCAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: EKSQQRSFTRIMHRRTLIQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...GATCAAGGTCCTTCTGTGCATTATTCTTGTAAAACTGCGCTGTTGAGACTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR TCA 90 bp | TATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCAATATGCAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: YVIRCSHCKMHEWLTFNMQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...CATATTGAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR TCA 90 bp | ATTTCAGGGTATCATACACATCGATCTCATTTTAAAGCACACAGGGAAATATCCCAGAGTTTTATCAAATaGGCTGGATGTGAACATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ISGYHTHRSHFKAHREISQSFIK*AGCEHA Trigger: GGCATGTTCACATCCAGCTCATTTGATAAAACTCTG...GGATATTTCCCTGTGTGCTTTAAAATGAGATCGATGTGTATGATACCCTGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| 3UTR CAA 72 bp | AAGAATGGAGGAGACTTCATAACAATCACTCCTGAGTaGACACAAGGAAAGGAAAGAACAATTGTATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KNGGDFITITPE*TQGKERTIVWH Trigger: ATGCCATACAATTGTTCTTTCCTTTCCTTGTGTCAACTCAGGAGTGATTGTTATGAAGTCTCCTCCATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123657.8 |
||
| CDS GCA 90 bp | TCCCTGTCTTTGTTTAACTCCAGCCCCAGGACCCTCCGTGTGGACTaGGCTCTACGCAAGCGAAGAGGGTCCTCCAAACCCGACTGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SLSLFNSSPRTLRVD*ALRKRRGSSKPDCR Trigger: TCGACAGTCGGGTTTGGAGGACCCTCTTCGCTTGCGTAGAGCGCAGTCCACACGGAGGGTCCTGGGGCTGGAGTTAAACAAAGACAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000123138.2 ENSMUST00000123182.8 ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS CCA 90 bp | CCACATCCCTGTCTTTGTTTAACTCCAGCCCCAGGACCCTCCGTGTaGACTGCGCTCTACGCAAGCGAAGAGGGTCCTCCAAACCCGACT | + |
|
Preference number: 5 (lower is better) Translates to: PHPCLCLTPAPGPSV*TALYASEEGPPNPT Trigger: AGTCGGGTTTGGAGGACCCTCTTCGCTTGCGTAGAGCGCAGTCCACACGGAGGGTCCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000123138.2 ENSMUST00000123182.8 ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS-3UTR CAA 90 bp | ACAGGAGGGGCCACGTGGTATACACCTCTAACCCCAGCACCTGGGAGCAGAGGCCAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: TGGATWYTPLTPAPGSRGQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...GCCTCTGCTCCCAGGTGCTGGGGTTAGAGGTGTATACCACGTGGCCCCTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | GCCCGTAGGGGCTGGCCCACCACCCTGGTGAATGCGCTCAAGGAGACAAGTTCTCAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARRGWPTTLVNALKETSSQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...AGAACTTGTCTCCTTGAGCGCATTCACCAGGGTGGTGGGCCAGCCCCTACGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS GCA 90 bp | CTGCCAAGATTTCCTGTCTGTGACCTTGGGTCCTCTTGTTCCAACTaGTACCAGACAGTGCTTGGTGGCTGCTGGGGACATGTGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: LPRFPVCDLGSSCSN*YQTVLGGCWGHVMT Trigger: AGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTCACAGACAGGAAATCTTGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS CCA 90 bp | TGCCAACGGAACACACTGCTTTACATGTGTAATGGGGCTGTCTGCTaGCGTTCTCAAGGTCATAGAGTACAACCACGCCATCGGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CQRNTLLYMCNGAVC*RSQGHRVQPRHRSH Trigger: GTGGCTCCGATGGCGTGGTTGTACTCTATGACCTTGAGAACGCCAGCAGACAGCCCCATTACACATGTAAAGCAGTGTGTTCCGTTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGAGAGCTTCTGAATAAATCCAGTGGAGGACGACAACCCCAGTGTCAGCCGTCCACATCCCTGTCTTaGTTTAACTCCAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGELLNKSSGGRQPQCQPSTSLS*FNSSPR Trigger: CCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGGA...CGGCTGACACTGGGGTTGTCGTCCTCCACTGGATTTATTCAGAAGCTCTCCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000123138.2 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTACCAGACAGTGCTTGGTGGCTGCTGGGGACATGTGATGACTGTAAACTGTCCACATCCCTGTCTTaGTTTAACTCCAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPDSAWWLLGTCDDCKLSTSLS*FNSSPR Trigger: CCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGGA...CAGTTTACAGTCATCACATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000123182.8 ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000152634.8 |
||
| CDS-3UTR CAA 90 bp | ATGGTGCAGGGTGTTGTCCCCGCTGGAGCTATTCCAGAGGCGCATTCGGTTGTCCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: MVQGVVPAGAIPEAHSVVLYCQH*LLPRYS Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...GACAACCGAATGCGCCTCTGGAATAGCTCCAGCGGGGACAACACCCTGCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS TCA 90 bp | GGCGTTCTCAAGGTCATAGAGTACAACCACGCCATCGGAGCCACCTaGCAACATGTATCTTCCTTCAACGGGCTCAATGTCGAGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVLKVIEYNHAIGAT*QHVSSFNGLNVEGV Trigger: AACACCCTCGACATTGAGCCCGTTGAAGGAAGATACATGTTGTCAGGTGGCTCCGATGGCGTGGTTGTACTCTATGACCTTGAGAACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||
| CDS GCA 90 bp | TTCTGCCAACGGAACACACTGCTTTACATGTGTAATGGGGCTGTCTaGTGGCGTTCTCAAGGTCATAGAGTACAACCACGCCATCGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FCQRNTLLYMCNGAV*WRSQGHRVQPRHRS Trigger: GCTCCGATGGCGTGGTTGTACTCTATGACCTTGAGAACGCCAGCAGACAGCCCCATTACACATGTAAAGCAGTGTGTTCCGTTGGCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | TCCTTGCCCAGAGCACGGCTTCATCACTTTCTCCCTAACCTTACTGAGGAGAAGTCCACATCCCTGTCTTaGTTTAACTCCAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLPRARLHHFLPNLTEEKSTSLS*FNSSPR Trigger: CCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGGA...CTTCTCCTCAGTAAGGTTAGGGAGAAAGTGATGAAGCCGTGCTCTGGGCAAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CAA 90 bp | TTGCAACAAGTTTCTCTAATCCTCCTTGCTAAACTCCTCCCTGAAGGTGGGAAGGCTACCAGACAGTGCTaGGTGGCTGCTGGGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: LQQVSLILLAKLLPEGGKATRQC*VAAGDM Trigger: CATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGC...CTTCCCACCTTCAGGGAGGAGTTTAGCAAGGAGGATTAGAGAAACTTGTTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | GAACACACAGCAGTCGACGCTTTTGTAATGTCCCTTGAGCATGGCGAGCCGCTCTGTCAGCACTTGCTGTaGCCAAGATATAGTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: EHTAVDAFVMSLEHGEPLCQHLL*PRYSHG Trigger: GCCATGACTATATCTTGGCAACAGCAAGTGCTGACA...GAGCGGCTCGCCATGCTCAAGGGACATTACAAAAGCGTCGACTGCTGTGTGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | GAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCACATATGAAGGTCCCATCCACATCCCTGTCTTaGTTTAACTCCAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESFLGHTFSSLDAHMKVPSTSLS*FNSSPR Trigger: CCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGGA...TGGGACCTTCATATGTGCATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS TCA 90 bp | TCTACTGTCAGCACTTGCTGTTGCCAAGATATAGTCATGGCGTGGTaGCCAGGAAACTGCCAAGATTTCCTGTCTGTGACCTTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STVSTCCCQDIVMAW*PGNCQDFLSVTLGP Trigger: AGGACCCAAGGTCACAGACAGGAAATCTTGGCAGTTTCCTGGTCACCACGCCATGACTATATCTTGGCAACAGCAAGTGCTGACAGTAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | GATTCAGCAGCTTGTGACTTTTTCCCATTATGCTGGTCAAGAGTAAGCAAGCATGCTACCAGACAGTGCTaGGTGGCTGCTGGGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: DSAACDFFPLCWSRVSKHATRQC*VAAGDM Trigger: CATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGC...ATGCTTGCTTACTCTTGACCAGCATAATGGGAAAAAGTCACAAGCTGCTGAATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | CTGTTGCAACAAGTTTCTCTAATCCTCCTTGCTAAACTCCTCCCTGAAGGTGGGGTACCTTGGGTCCTCTaGTTCCAACTGCTACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LLQQVSLILLAKLLPEGGVPWVL*FQLLPD Trigger: GTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTAC...CCCACCTTCAGGGAGGAGTTTAGCAAGGAGGATTAGAGAAACTTGTTGCAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS-3UTR CAA 90 bp | ATACAGAGTTCCAGGCTAGTCCAGGCTAGCCAGGGTTACATCGTGAGACACTGTTGTCAGCACTTGCTGTaGCCAAGATATAGTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: IQSSRLVQASQGYIVRHCCQHLL*PRYSHG Trigger: GCCATGACTATATCTTGGCAACAGCAAGTGCTGACA...ACAGTGTCTCACGATGTAACCCTGGCTAGCCTGGACTAGCCTGGAACTCTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGGAGTCAGAGCTGAGAGCTTCCTGGGTCATACTTTCAGCTCCTTGGATGCTCTACTGTCAGCACTaGCTGTTGCCAAGATATAGT | + |
|
Preference number: 5 (lower is better) Translates to: SQESELRASWVILSAPWMLYCQH*LLPRYS Trigger: ACTATATCTTGGCAACAGCAAGTGCTGACAGTAGAG...CATCCAAGGAGCTGAAAGTATGACCCAGGAAGCTCTCAGCTCTGACTCCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000054835.15 ENSMUST00000142931.8 |
||
| CDS-3UTR CAA 90 bp | TGCATGGATTTTGCTGAGTTTCACAGGAAGGAATTAAGACTGAGTGTAAGCTGCTCCACATCCCTGTCTTaGTTTAACTCCAGCCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: CMDFAEFHRKELRLSVSCSTSLS*FNSSPR Trigger: CCTGGGGCTGGAGTTAAACAAAGACAGGGATGTGGA...GCAGCTTACACTCAGTCTTAATTCCTTCCTGTGAAACTCAGCAAAATCCATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000054835.15 ENSMUST00000123657.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS-3UTR CAA 90 bp | ACAGCGCAGTTTTACAAGAATAATGCACAGAAGGACCTTGATCTCTCTGTTGACGTACCTTGGGTCCTCTaGTTCCAACTGCTACCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: TAQFYKNNAQKDLDLSVDVPWVL*FQLLPD Trigger: GTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTAC...GTCAACAGAGAGATCAAGGTCCTTCTGTGCATTATTCTTGTAAAACTGCGCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CAA 90 bp | TTTTACAAGAATAATGCACAGAAGGACCTTGATCTCTCTGTTGACTTAACAACTGCTACCAGACAGTGCTaGGTGGCTGCTGGGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: FYKNNAQKDLDLSVDLTTATRQC*VAAGDM Trigger: CATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGC...AGTTGTTAAGTCAACAGAGAGATCAAGGTCCTTCTGTGCATTATTCTTGTAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CAA 90 bp | GAAAAGTCTCAACAGCGCAGTTTTACAAGAATAATGCACAGAAGGACCTTGATCCAGCCTGCAATGTGTTaGTATCCCACACTTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EKSQQRSFTRIMHRRTLIQPAMC*YPTLSE Trigger: CTCTGAAAGTGTGGGATACAAACACATTGCAGGCTG...GATCAAGGTCCTTCTGTGCATTATTCTTGTAAAACTGCGCTGTTGAGACTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CAA 90 bp | CAGTCACTGCTCATAGAAAAGTCTCAACAGCGCAGTTTTACAAGAATAATGCACTCACAAAGTTGTACCTaGGGTCCTCTTGTTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: QSLLIEKSQQRSFTRIMHSQSCT*GPLVPT Trigger: AGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGA...GTGCATTATTCTTGTAAAACTGCGCTGTTGAGACTTTTCTATGAGCAGTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120672.8 |
||
| CDS-3UTR CAA 90 bp | TATGTGATACGATGTTCACACTGCAAGATGCATGAGTGGCTAACATTCAATATGTCACAAAGTTGTACCTaGGGTCCTCTTGTTCCAACT | + |
|
Preference number: 5 (lower is better) Translates to: YVIRCSHCKMHEWLTFNMSQSCT*GPLVPT Trigger: AGTTGGAACAAGAGGACCCAAGGTACAACTTTGTGA...CATATTGAATGTTAGCCACTCATGCATCTTGCAGTGTGAACATCGTATCACATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054835.15 |
||
| CDS GCA 72 bp | TTTCCTGTCTGTGACCTTGGGTCCTCTTGTTCCAACTaGTACCAGACAGTGCTTGGTGGCTGCTGGGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: FPVCDLGSSCSN*YQTVLGGCWGH Trigger: ATGTCCCCAGCAGCCACCAAGCACTGTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTCACAGACAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS TCA 72 bp | CGTGGTGACCAGGAAACTGCCAAGATTTCCTGTCTGTaGCCTTGGGTCCTCTTGTTCCAACTGCTACCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: RGDQETAKISCL*PWVLLFQLLPD Trigger: GTCTGGTAGCAGTTGGAACAAGAGGACCCAAGGTCACAGACAGGAAATCTTGGCAGTTTCCTGGTCACCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142931.8 |
||
| CDS GCA 72 bp | CGGAACACACTGCTTTACATGTGTAATGGGGCTGTCTaGTGGCGTTCTCAAGGTCATAGAGTACAACCACGC | + |
|
Preference number: 6 (lower is better) Translates to: RNTLLYMCNGAV*WRSQGHRVQPR Trigger: GCGTGGTTGTACTCTATGACCTTGAGAACGCCAGCAGACAGCCCCATTACACATGTAAAGCAGTGTGTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||
| CDS TCA 72 bp | AAGGTCATAGAGTACAACCACGCCATCGGAGCCACCTaGCAACATGTATCTTCCTTCAACGGGCTCAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: KVIEYNHAIGAT*QHVSSFNGLNV Trigger: GACATTGAGCCCGTTGAAGGAAGATACATGTTGTCAGGTGGCTCCGATGGCGTGGTTGTACTCTATGACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||
| CDS CCA 72 bp | ACGGGCTCAATGTCGAGGGTGTTAACCCCACTGCCATaGATTCTTTCCACATCCCTGTCTTTGTTTAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: TGSMSRVLTPLP*ILSTSLSLFNS Trigger: GGAGTTAAACAAAGACAGGGATGTGGAAAGAATCCATGGCAGTGGGGTTAACACCCTCGACATTGAGCCCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000123138.2 ENSMUST00000123182.8 ENSMUST00000123657.8 ENSMUST00000129117.8 ENSMUST00000133957.8 ENSMUST00000142931.8 ENSMUST00000152634.8 |
||
| CDS GCA 72 bp | TCTCCACGCTGTATTTGTGAACATCGGGATGGCTTCTaGCAACGGAACACACTGCTTTACATGTGTAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPRCICEHRDGF*QRNTLLYMCNG Trigger: CCCATTACACATGTAAAGCAGTGTGTTCCGTTGGCAGAAGCCATCCCGATGTTCACAAATACAGCGTGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||
| CDS CCA 72 bp | AACACACTGCTTTACATGTGTAATGGGGCTGTCTGCTaGCGTTCTCAAGGTCATAGAGTACAACCACGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NTLLYMCNGAVC*RSQGHRVQPRH Trigger: ATGGCGTGGTTGTACTCTATGACCTTGAGAACGCCAGCAGACAGCCCCATTACACATGTAAAGCAGTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000054835.15 ENSMUST00000120672.8 ENSMUST00000142931.8 |
||