Pregenerated sensors for ERCC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026048Ensembl transcript IDs: ENSMUST00000027214.4
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGGTGTGAGAGGCGCTGTGTCAAATGGCACGCCTCCACCTCTTTCTaGCGTTTCATCAGCATGCTCCTCCTGCTCCAGCCCACTTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: GCERRCVKWHASTSF*RFISMLLLLQPTSK Trigger: CTTGGAAGTGGGCTGGAGCAGGAGGAGCATGCTGATGAAACGGCAGAAAGAGGTGGAGGCGTGCCATTTGACACAGCGCCTCTCACACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | TCCAGAAGTCTGGTCAGTGAGGTCCAACATGGCACACTGTGCCTCTaGCTCCATGGGAGCCTGGATGTAGGGAACGCCAAACAGGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SRSLVSEVQHGTLCL*LHGSLDVGNAKQAQ Trigger: CTGCGCCTGTTTGGCGTTCCCTACATCCAGGCTCCCATGGAGGCAGAGGCACAGTGTGCCATGTTGGACCTCACTGACCAGACTTCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | GAACGATCCCCTGGAGTCATCCACCACAGGCCTGAGGTAAGCATCTaGAACTGCCGGGTTGGGGAAACCAGGTGTCAGCTGCAACTTCCG | + |
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Preference number: 5 (lower is better) Translates to: ERSPGVIHHRPEVSI*NCRVGETRCQLQLP Trigger: CGGAAGTTGCAGCTGACACCTGGTTTCCCCAACCCGGCAGTTGCAGATGCTTACCTCAGGCCTGTGGTGGATGACTCCAGGGGATCGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | CCATCTCCATTGGTCCCATGGGCTTTGGAGCTGAAATCAGCTCCCTaGCAGCAGCCTCAGGCACCTCCCGTAGCTGGATGGTTTCCTGGA | + |
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Preference number: 5 (lower is better) Translates to: PSPLVPWALELKSAP*QQPQAPPVAGWFPG Trigger: TCCAGGAAACCATCCAGCTACGGGAGGTGCCTGAGGCTGCTGCCAGGGAGCTGATTTCAGCTCCAAAGCCCATGGGACCAATGGAGATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | GAAGGAGGCGCGGCCTCTGGCTCTCTCTCCGGCTTCACTTTCTCGTaGGGTGATGACTTCAGGTTGGAAGACACACTGTGTACGTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: EGGAASGSLSGFTFS*GDDFRLEDTLCTLL Trigger: CAGCAACGTACACAGTGTGTCTTCCAACCTGAAGTCATCACCCCACGAGAAAGTGAAGCCGGAGAGAGAGCCAGAGGCCGCGCCTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | CTACTCTCTGGCTCATCTTCTGAGCTACTTCCCAGCATGGCTGCCTaGATAGCCAGTAGAGTTCTTGGAGAAGGAGGCGCGGCCTCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LLSGSSSELLPSMAA*IASRVLGEGGAASG Trigger: GCCAGAGGCCGCGCCTCCTTCTCCAAGAACTCTACTGGCTATTCAGGCAGCCATGCTGGGAAGTAGCTCAGAAGATGAGCCAGAGAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | TGCTGCCACTGGTTACACACTCCTTTACCTCAGTCACACTGGGTGTaGGAGGCGCTGTGTCAAATGGCACGCCTCCACCTCTTTCTGCCG | + |
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Preference number: 5 (lower is better) Translates to: CCHWLHTPLPQSHWV*EALCQMARLHLFLP Trigger: CGGCAGAAAGAGGTGGAGGCGTGCCATTTGACACAGCGCCTCTCACACCCAGTGTGACTGAGGTAAAGGAGTGTGTAACCAGTGGCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | CTCCTTTACCTCAGTCACACTGGGTGTGAGAGGCGCTGTGTCAAATaGCACGCCTCCACCTCTTTCTGCCGTTTCATCAGCATGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: LLYLSHTGCERRCVK*HASTSFCRFISMLL Trigger: GAGGAGCATGCTGATGAAACGGCAGAAAGAGGTGGAGGCGTGCCATTTGACACAGCGCCTCTCACACCCAGTGTGACTGAGGTAAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | GTGTCAAATGGCACGCCTCCACCTCTTTCTGCCGTTTCATCAGCATaGTCCTCCTGCTCCAGCCCACTTCCAAGCAGCATTTTCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: VSNGTPPPLSAVSSA*SSCSSPLPSSIFSA Trigger: AGCAGAGAAAATGCTGCTTGGAAGTGGGCTGGAGCAGGAGGAGCATGCTGATGAAACGGCAGAAAGAGGTGGAGGCGTGCCATTTGACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | ATGCTGGTGAGAGGGCAGCTGGCCTACCCTCCACCTCACATTCACTaGTTATCTGAGATGCTTCTTTCACGGCACGAGCAAGAGACACTG | + |
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Preference number: 5 (lower is better) Translates to: MLVRGQLAYPPPHIH*LSEMLLSRHEQETL Trigger: CAGTGTCTCTTGCTCGTGCCGTGAAAGAAGCATCTCAGATAAGCAGTGAATGTGAGGTGGAGGGTAGGCCAGCTGCCCTCTCACCAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | TTCCATCAGACTCGCTTTCTTCAGACTCCATCTCCATTGGTCCCATaGGCTTTGGAGCTGAAATCAGCTCCCTGGCAGCAGCCTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: FHQTRFLQTPSPLVP*ALELKSAPWQQPQA Trigger: TGCCTGAGGCTGCTGCCAGGGAGCTGATTTCAGCTCCAAAGCCCATGGGACCAATGGAGATGGAGTCTGAAGAAAGCGAGTCTGATGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | TCCCTGGCAGCAGCCTCAGGCACCTCCCGTAGCTGGATGGTTTCCTaGAAATCTCCACGTTCTTCAGCATTAGAAGGCAACGCATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: SLAAASGTSRSWMVS*KSPRSSALEGNAFS Trigger: AGAAAATGCGTTGCCTTCTAATGCTGAAGAACGTGGAGATTTCCAGGAAACCATCCAGCTACGGGAGGTGCCTGAGGCTGCTGCCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | GTGTATGTCTATCCCCTGATCAGAATGTGTTCTTGTCGTCGGAGGTaGCAGGGTGGGTTCCCTTTCACTGAGGACTCCAGAGACATGACT | + |
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Preference number: 5 (lower is better) Translates to: VYVYPLIRMCSCRRR*QGGFPFTEDSRDMT Trigger: AGTCATGTCTCTGGAGTCCTCAGTGAAAGGGAACCCACCCTGGCACCTCCGACGACAAGAACACATTCTGATCAGGGGATAGACATACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | GCTCTCTCTCCGGCTTCACTTTCTCGTGGGGTGATGACTTCAGGTTaGAAGACACACTGTGTACGTTGCTGGAGGAAGGAAGAGATTCTG | + |
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Preference number: 5 (lower is better) Translates to: ALSPASLSRGVMTSG*KTHCVRCWRKEEIL Trigger: CAGAATCTCTTCCTTCCTCCAGCAACGTACACAGTGTGTCTTCCAACCTGAAGTCATCACCCCACGAGAAAGTGAAGCCGGAGAGAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | TTGCCTCAATGTCAGAGCTGTCCTGTAGGAGGCACTCTGTGTCCCTaGAGGTTCCTTCCTCCAGAGTTTCTCTTGGTTCCTCTGCATCTT | + |
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Preference number: 5 (lower is better) Translates to: LPQCQSCPVGGTLCP*RFLPPEFLLVPLHL Trigger: AAGATGCAGAGGAACCAAGAGAAACTCTGGAGGAAGGAACCTCCAGGGACACAGAGTGCCTCCTACAGGACAGCTCTGACATTGAGGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | CTGCTGCCAGACACTTTCTCATCGTTATCATCATCCAGAGCTTTCTaGATAGCTGCACAGGTCCGGGGTGAGATGGAACCTGCATCTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLPDTFSSLSSSRAF*IAAQVRGEMEPASA Trigger: TGCAGATGCAGGTTCCATCTCACCCCGGACCTGTGCAGCTATTCAGAAAGCTCTGGATGATGATAACGATGAGAAAGTGTCTGGCAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | TCCCATGAGGAGGGTCTCTCACTAAGTCAGGCACATCTGAGCAGCTaGTTTTTGACGACTCAGCTGCACTTCTCTGTCGTGCACTCATCA | + |
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Preference number: 5 (lower is better) Translates to: SHEEGLSLSQAHLSS*FLTTQLHFSVVHSS Trigger: TGATGAGTGCACGACAGAGAAGTGCAGCTGAGTCGTCAAAAATCAGCTGCTCAGATGTGCCTGACTTAGTGAGAGACCCTCCTCATGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | CCAAACAGCCAGATATCACTATCGTCAGTAATCGTTCCAGAAGTCTaGTCAGTGAGGTCCAACATGGCACACTGTGCCTCTGCCTCCATG | + |
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Preference number: 5 (lower is better) Translates to: PNSQISLSSVIVPEV*SVRSNMAHCASASM Trigger: CATGGAGGCAGAGGCACAGTGTGCCATGTTGGACCTCACTGACCAGACTTCTGGAACGATTACTGACGATAGTGATATCTGGCTGTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | TGCTTTGGGAGCAGGGTTTTGCCCACCTTCTGTTTCATCGTCACTTaGAAGGCGAGAGGAATTACACTTGGTCTCAAGTGGGTAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: CFGSRVLPTFCFIVT*KARGITLGLKWVES Trigger: GGACTCTACCCACTTGAGACCAAGTGTAATTCCTCTCGCCTTTCAAGTGACGATGAAACAGAAGGTGGGCAAAACCCTGCTCCCAAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | CTGAGAATTTTAGGAGTGGGTCCAGGCCTCGTCCAGGGAATTCATTaGGAATCTCCATGGCTGTTACACAGCCTACAGTTGGTATCCCTT | + |
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Preference number: 5 (lower is better) Translates to: LRILGVGPGLVQGIH*ESPWLLHSLQLVSL Trigger: AAGGGATACCAACTGTAGGCTGTGTAACAGCCATGGAGATTCTCAATGAATTCCCTGGACGAGGCCTGGACCCACTCCTAAAATTCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | GAAGGCAACGCATTTTCTAAGTTACTCATTGCCTCTGCAGGGACATaGACTGTACTACATGCTTTGGGAGCAGGGTTTTGCCCACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: EGNAFSKLLIASAGT*TVLHALGAGFCPPS Trigger: AGAAGGTGGGCAAAACCCTGCTCCCAAAGCATGTAGTACAGTTCATGTCCCTGCAGAGGCAATGAGTAACTTAGAAAATGCGTTGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | TTCTCGGTGGTTTTTCTCGAGTCAATGGATGCAGAATCCTTCCTCTaGCTTCTCTTTGCCAAGGTCTGTTTCTTTAGCAGCGGAGCATCA | + |
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Preference number: 5 (lower is better) Translates to: FSVVFLESMDAESFL*LLFAKVCFFSSGAS Trigger: TGATGCTCCGCTGCTAAAGAAACAGACCTTGGCAAAGAGAAGGCAGAGGAAGGATTCTGCATCCATTGACTCGAGAAAAACCACCGAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | TTTTCTATCACATTCCCATGGCTATCTCGGACTCCTTTAAGTGCTTaGTTTAGCCAAATGCTAATATCCACGGCCAGCACCTTGCCCTCC | + |
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Preference number: 5 (lower is better) Translates to: FSITFPWLSRTPLSA*FSQMLISTASTLPS Trigger: GGAGGGCAAGGTGCTGGCCGTGGATATTAGCATTTGGCTAAACCAAGCACTTAAAGGAGTCCGAGATAGCCATGGGAATGTGATAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | TGGTTCCTCTGCATCTTTTTCAGAGAGATGTGTAGAAGCCTCGGATaGCTCTGTTTGAAGTTCACTATTGCTGACCACACTCTGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: WFLCIFFREMCRSLG*LCLKFTIADHTLHL Trigger: GAGGTGCAGAGTGTGGTCAGCAATAGTGAACTTCAAACAGAGTCATCCGAGGCTTCTACACATCTCTCTGAAAAAGATGCAGAGGAACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | CTTTCCAGAAACATCTGGCCTGTTACAGAGGCAGCAATCCGATCTTaGTGCTGTTTTTGCGCTTTCAGTGAATTCTGTTCTGCTAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: LSRNIWPVTEAAIRS*CCFCAFSEFCSAKR Trigger: CCTCTTAGCAGAACAGAATTCACTGAAAGCGCAAAAACAGCAGCAAGATCGGATTGCTGCCTCTGTAACAGGCCAGATGTTTCTGGAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | CACCTTCTGTTTCATCGTCACTTGAAAGGCGAGAGGAATTACACTTaGTCTCAAGTGGGTAGAGTCCGTTTTGTAGCTCAGGATCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HLLFHRHLKGERNYT*SQVGRVRFVAQDLQ Trigger: CTGAAGATCCTGAGCTACAAAACGGACTCTACCCACTTGAGACCAAGTGTAATTCCTCTCGCCTTTCAAGTGACGATGAAACAGAAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 90 bp | AGTTACTCATTGCCTCTGCAGGGACATGAACTGTACTACATGCTTTaGGAGCAGGGTTTTGCCCACCTTCTGTTTCATCGTCACTTGAAA | + |
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Preference number: 5 (lower is better) Translates to: SYSLPLQGHELYYML*EQGFAHLLFHRHLK Trigger: TTTCAAGTGACGATGAAACAGAAGGTGGGCAAAACCCTGCTCCCAAAGCATGTAGTACAGTTCATGTCCCTGCAGAGGCAATGAGTAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 90 bp | AAGAGGTTACTTTCCAGGGCATCCAGTTCCTCCAAATTAATATCTTaGCATTCGTTGGGCATGTCCTCAGCATCTATGTCAGCTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: KRLLSRASSSSKLIS*HSLGMSSASMSASL Trigger: CAGAGAAGCTGACATAGATGCTGAGGACATGCCCAACGAATGGCAAGATATTAATTTGGAGGAACTGGATGCCCTGGAAAGTAACCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | CTTCAGAAAGCCTCCCTCATCTTGATATTGCCTCTGGATTTGCCCTaGATGCTGCTGGTTCATTTCCTTTTGGACATTTTCTATGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LQKASLILILPLDLP*MLLVHFLLDIFYVL Trigger: CAGCACATAGAAAATGTCCAAAAGGAAATGAACCAGCAGCATTCAGGGCAAATCCAGAGGCAATATCAAGATGAGGGAGGCTTTCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 90 bp | GCATCTTTTTCAGAGAGATGTGTAGAAGCCTCGGATGACTCTGTTTaGAGTTCACTATTGCTGACCACACTCTGCACCTCAATGAAACTT | + |
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Preference number: 5 (lower is better) Translates to: ASFSERCVEASDDSV*SSLLLTTLCTSMKL Trigger: AAGTTTCATTGAGGTGCAGAGTGTGGTCAGCAATAGTGAACTTCAAACAGAGTCATCCGAGGCTTCTACACATCTCTCTGAAAAAGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | AGCACCTTGCCCTCCAGCGCCTCCGGGCTGACCCGGTaGCCCGAGCACTCCAGCAGCTTCCACAGCCCCTGC | + |
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Preference number: 6 (lower is better) Translates to: STLPSSASGLTR*PEHSSSFHSPC Trigger: GCAGGGGCTGTGGAAGCTGCTGGAGTGCTCGGGCCACCGGGTCAGCCCGGAGGCGCTGGAGGGCAAGGTGCT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | TGGTTTAGCCAAATGCTAATATCCACGGCCAGCACCTaGCCCTCCAGCGCCTCCGGGCTGACCCGGTGGCCC | + |
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Preference number: 6 (lower is better) Translates to: WFSQMLISTAST*PSSASGLTRWP Trigger: GGGCCACCGGGTCAGCCCGGAGGCGCTGGAGGGCAAGGTGCTGGCCGTGGATATTAGCATTTGGCTAAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | TTAAGTGCTTGGTTTAGCCAAATGCTAATATCCACGGCCAGCACCTaGCCCTCCAGCGCCTCCGGGCTGACCCGGTGGCCCGAGCACTCC | + |
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Preference number: 6 (lower is better) Translates to: LSAWFSQMLISTAST*PSSASGLTRWPEHS Trigger: GGAGTGCTCGGGCCACCGGGTCAGCCCGGAGGCGCTGGAGGGCAAGGTGCTGGCCGTGGATATTAGCATTTGGCTAAACCAAGCACTTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | CCTGGAGTCATCCACCACAGGCCTGAGGTAAGCATCTaGAACTGCCGGGTTGGGGAAACCAGGTGTCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGVIHHRPEVSI*NCRVGETRCQL Trigger: CAGCTGACACCTGGTTTCCCCAACCCGGCAGTTGCAGATGCTTACCTCAGGCCTGTGGTGGATGACTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | ACAGGAACGATCCCCTGGAGTCATCCACCACAGGCCTaGGGTAAGCATCTGCAACTGCCGGGTTGGGGAAAC | + |
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Preference number: 6 (lower is better) Translates to: TGTIPWSHPPQA*GKHLQLPGWGN Trigger: GTTTCCCCAACCCGGCAGTTGCAGATGCTTACCTCAGGCCTGTGGTGGATGACTCCAGGGGATCGTTCCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | GCGGCCTCTGGCTCTCTCTCCGGCTTCACTTTCTCGTaGGGTGATGACTTCAGGTTGGAAGACACACTGTGT | + |
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Preference number: 6 (lower is better) Translates to: AASGSLSGFTFS*GDDFRLEDTLC Trigger: ACACAGTGTGTCTTCCAACCTGAAGTCATCACCCCACGAGAAAGTGAAGCCGGAGAGAGAGCCAGAGGCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | CTCAGTCACACTGGGTGTGAGAGGCGCTGTGTCAAATaGCACGCCTCCACCTCTTTCTGCCGTTTCATCAGC | + |
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Preference number: 6 (lower is better) Translates to: LSHTGCERRCVK*HASTSFCRFIS Trigger: GCTGATGAAACGGCAGAAAGAGGTGGAGGCGTGCCATTTGACACAGCGCCTCTCACACCCAGTGTGACTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | GGCTCATCTTCTGAGCTACTTCCCAGCATGGCTGCCTaGATAGCCAGTAGAGTTCTTGGAGAAGGAGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: GSSSELLPSMAA*IASRVLGEGGA Trigger: CGCGCCTCCTTCTCCAAGAACTCTACTGGCTATTCAGGCAGCCATGCTGGGAAGTAGCTCAGAAGATGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | CTGGAGCTACTAGTGGACACACAGCCTTGCCTCCCATaGGGAGGGTCTCTCACTAAGTCAGGCACATCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LELLVDTQPCLP*GGSLTKSGTSE Trigger: CTCAGATGTGCCTGACTTAGTGAGAGACCCTCCTCATGGGAGGCAAGGCTGTGTGTCCACTAGTAGCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | AGAGACATGACTGCTTGGAGTTCCTATGAATGCTGGTaGGAGGGCAGCTGGCCTACCCTCCACCTCACATTC | + |
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Preference number: 6 (lower is better) Translates to: RDMTAWSSYECW*EGSWPTLHLTF Trigger: GAATGTGAGGTGGAGGGTAGGCCAGCTGCCCTCTCACCAGCATTCATAGGAACTCCAAGCAGTCATGTCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | AGAGGGCAGCTGGCCTACCCTCCACCTCACATTCACTaGTTATCTGAGATGCTTCTTTCACGGCACGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: RGQLAYPPPHIH*LSEMLLSRHEQ Trigger: TTGCTCGTGCCGTGAAAGAAGCATCTCAGATAAGCAGTGAATGTGAGGTGGAGGGTAGGCCAGCTGCCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | TATCCCCTGATCAGAATGTGTTCTTGTCGTCGGAGGTaGCAGGGTGGGTTCCCTTTCACTGAGGACTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: YPLIRMCSCRRR*QGGFPFTEDSR Trigger: TCTGGAGTCCTCAGTGAAAGGGAACCCACCCTGGCACCTCCGACGACAAGAACACATTCTGATCAGGGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | GCAGCCTCAGGCACCTCCCGTAGCTGGATGGTTTCCTaGAAATCTCCACGTTCTTCAGCATTAGAAGGCAAC | + |
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Preference number: 6 (lower is better) Translates to: AASGTSRSWMVS*KSPRSSALEGN Trigger: GTTGCCTTCTAATGCTGAAGAACGTGGAGATTTCCAGGAAACCATCCAGCTACGGGAGGTGCCTGAGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | TGTCAGAGCTGTCCTGTAGGAGGCACTCTGTGTCCCTaGAGGTTCCTTCCTCCAGAGTTTCTCTTGGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CQSCPVGGTLCP*RFLPPEFLLVP Trigger: AGGAACCAAGAGAAACTCTGGAGGAAGGAACCTCCAGGGACACAGAGTGCCTCCTACAGGACAGCTCTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | GCTGGCCTACCCTCCACCTCACATTCACTGCTTATCTaGGATGCTTCTTTCACGGCACGAGCAAGAGACACT | + |
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Preference number: 6 (lower is better) Translates to: AGLPSTSHSLLI*DASFTARARDT Trigger: AGTGTCTCTTGCTCGTGCCGTGAAAGAAGCATCTCAGATAAGCAGTGAATGTGAGGTGGAGGGTAGGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | AGGGTGGGTTCCCTTTCACTGAGGACTCCAGAGACATaGCTGCTTGGAGTTCCTATGAATGCTGGTGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: RVGSLSLRTPET*LLGVPMNAGER Trigger: CCTCTCACCAGCATTCATAGGAACTCCAAGCAGTCATGTCTCTGGAGTCCTCAGTGAAAGGGAACCCACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | TCCGGCTTCACTTTCTCGTGGGGTGATGACTTCAGGTaGGAAGACACACTGTGTACGTTGCTGGAGGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: SGFTFSWGDDFR*EDTLCTLLEEG Trigger: TCCTTCCTCCAGCAACGTACACAGTGTGTCTTCCAACCTGAAGTCATCACCCCACGAGAAAGTGAAGCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | GGCTCTCTCTCCGGCTTCACTTTCTCGTGGGGTGATGACTTCAGGTaGGAAGACACACTGTGTACGTTGCTGGAGGAAGGAAGAGATTCT | + |
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Preference number: 6 (lower is better) Translates to: GSLSGFTFSWGDDFR*EDTLCTLLEEGRDS Trigger: AGAATCTCTTCCTTCCTCCAGCAACGTACACAGTGTGTCTTCCAACCTGAAGTCATCACCCCACGAGAAAGTGAAGCCGGAGAGAGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | TTAGGAGTGGGTCCAGGCCTCGTCCAGGGAATTCATTaGGAATCTCCATGGCTGTTACACAGCCTACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LGVGPGLVQGIH*ESPWLLHSLQL Trigger: CAACTGTAGGCTGTGTAACAGCCATGGAGATTCTCAATGAATTCCCTGGACGAGGCCTGGACCCACTCCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | GAGGGTCTCTCACTAAGTCAGGCACATCTGAGCAGCTaGTTTTTGACGACTCAGCTGCACTTCTCTGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: EGLSLSQAHLSS*FLTTQLHFSVV Trigger: CACGACAGAGAAGTGCAGCTGAGTCGTCAAAAATCAGCTGCTCAGATGTGCCTGACTTAGTGAGAGACCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | CCTCAGCATCTATGTCAGCTTCTCTGTGTCCTTCCATaGCCTCAATGTCAGAGCTGTCCTGTAGGAGGCACT | + |
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Preference number: 6 (lower is better) Translates to: PQHLCQLLCVLP*PQCQSCPVGGT Trigger: AGTGCCTCCTACAGGACAGCTCTGACATTGAGGCAATGGAAGGACACAGAGAAGCTGACATAGATGCTGAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | TTCTTCCCAAATACAGGTCTAGCAGTCACTAGGACAGTCTTGGCTTaGTCCTCATCATCCTCGCTGGAGCTACTAGTGGACACACAGCCT | + |
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Preference number: 6 (lower is better) Translates to: FFPNTGLAVTRTVLA*SSSSSLELLVDTQP Trigger: AGGCTGTGTGTCCACTAGTAGCTCCAGCGAGGATGATGAGGACAAAGCCAAGACTGTCCTAGTGACTGCTAGACCTGTATTTGGGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | ACTCATTGCCTCTGCAGGGACATGAACTGTACTACATaGTTTGGGAGCAGGGTTTTGCCCACCTTCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: THCLCRDMNCTT*FGSRVLPTFCF Trigger: GAAACAGAAGGTGGGCAAAACCCTGCTCCCAAAGCATGTAGTACAGTTCATGTCCCTGCAGAGGCAATGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | TTGCCTCTGCAGGGACATGAACTGTACTACATGCTTTaGGAGCAGGGTTTTGCCCACCTTCTGTTTCATCGT | + |
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Preference number: 6 (lower is better) Translates to: LPLQGHELYYML*EQGFAHLLFHR Trigger: ACGATGAAACAGAAGGTGGGCAAAACCCTGCTCCCAAAGCATGTAGTACAGTTCATGTCCCTGCAGAGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | TTTAGGAGTGGGTCCAGGCCTCGTCCAGGGAATTCATaGAGAATCTCCATGGCTGTTACACAGCCTACAGTT | + |
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Preference number: 6 (lower is better) Translates to: FRSGSRPRPGNS*RISMAVTQPTV Trigger: AACTGTAGGCTGTGTAACAGCCATGGAGATTCTCAATGAATTCCCTGGACGAGGCCTGGACCCACTCCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | AATACAGGTCTAGCAGTCACTAGGACAGTCTTGGCTTaGTCCTCATCATCCTCGCTGGAGCTACTAGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: NTGLAVTRTVLA*SSSSSLELLVD Trigger: GTCCACTAGTAGCTCCAGCGAGGATGATGAGGACAAAGCCAAGACTGTCCTAGTGACTGCTAGACCTGTATT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | ATGCTTTGGGAGCAGGGTTTTGCCCACCTTCTGTTTCATCGTCACTaGAAAGGCGAGAGGAATTACACTTGGTCTCAAGTGGGTAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: MLWEQGFAHLLFHRH*KGERNYTWSQVGRV Trigger: GACTCTACCCACTTGAGACCAAGTGTAATTCCTCTCGCCTTTCAAGTGACGATGAAACAGAAGGTGGGCAAAACCCTGCTCCCAAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | TCTGAGAATTTTAGGAGTGGGTCCAGGCCTCGTCCAGGGAATTCATaGAGAATCTCCATGGCTGTTACACAGCCTACAGTTGGTATCCCT | + |
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Preference number: 6 (lower is better) Translates to: SENFRSGSRPRPGNS*RISMAVTQPTVGIP Trigger: AGGGATACCAACTGTAGGCTGTGTAACAGCCATGGAGATTCTCAATGAATTCCCTGGACGAGGCCTGGACCCACTCCTAAAATTCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | TTGAACCTGAGTGAGACTGGGTGGCGCTTCATGTCTTaGGCTTCTGAAAGCAGTTTTCAGAGCCTGTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: LNLSETGWRFMS*ASESSFQSLSL Trigger: AAGAGACAGGCTCTGAAAACTGCTTTCAGAAGCTCAAGACATGAAGCGCCACCCAGTCTCACTCAGGTTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | GACACTTTCTCATCGTTATCATCATCCAGAGCTTTCTaGATAGCTGCACAGGTCCGGGGTGAGATGGAACCT | + |
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Preference number: 6 (lower is better) Translates to: DTFSSLSSSRAF*IAAQVRGEMEP Trigger: AGGTTCCATCTCACCCCGGACCTGTGCAGCTATTCAGAAAGCTCTGGATGATGATAACGATGAGAAAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | AGCAGGGTTTTGCCCACCTTCTGTTTCATCGTCACTTaGAAGGCGAGAGGAATTACACTTGGTCTCAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SRVLPTFCFIVT*KARGITLGLKW Trigger: CCACTTGAGACCAAGTGTAATTCCTCTCGCCTTTCAAGTGACGATGAAACAGAAGGTGGGCAAAACCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | ACATTCCCATGGCTATCTCGGACTCCTTTAAGTGCTTaGTTTAGCCAAATGCTAATATCCACGGCCAGCACC | + |
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Preference number: 6 (lower is better) Translates to: TFPWLSRTPLSA*FSQMLISTAST Trigger: GGTGCTGGCCGTGGATATTAGCATTTGGCTAAACCAAGCACTTAAAGGAGTCCGAGATAGCCATGGGAATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | CAGATATCACTATCGTCAGTAATCGTTCCAGAAGTCTaGTCAGTGAGGTCCAACATGGCACACTGTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QISLSSVIVPEV*SVRSNMAHCAS Trigger: AGAGGCACAGTGTGCCATGTTGGACCTCACTGACCAGACTTCTGGAACGATTACTGACGATAGTGATATCTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | CTTTCCAGGGCATCCAGTTCCTCCAAATTAATATCTTGCCATTCGTaGGGCATGTCCTCAGCATCTATGTCAGCTTCTCTGTGTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSRASSSSKLISCHS*GMSSASMSASLCPS Trigger: GGAAGGACACAGAGAAGCTGACATAGATGCTGAGGACATGCCCAACGAATGGCAAGATATTAATTTGGAGGAACTGGATGCCCTGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | GTGATGACTTCAGGTTGGAAGACACACTGTGTACGTTaGTGGAGGAAGGAAGAGATTCTGAATCCACATCCA | + |
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Preference number: 6 (lower is better) Translates to: VMTSGWKTHCVR*WRKEEILNPHP Trigger: TGGATGTGGATTCAGAATCTCTTCCTTCCTCCAGCAACGTACACAGTGTGTCTTCCAACCTGAAGTCATCAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | GCATTTTCTAAGTTACTCATTGCCTCTGCAGGGACATaGACTGTACTACATGCTTTGGGAGCAGGGTTTTGC | + |
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Preference number: 6 (lower is better) Translates to: AFSKLLIASAGT*TVLHALGAGFC Trigger: GCAAAACCCTGCTCCCAAAGCATGTAGTACAGTTCATGTCCCTGCAGAGGCAATGAGTAACTTAGAAAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | AACATCTGGCCTGTTACAGAGGCAGCAATCCGATCTTaGTGCTGTTTTTGCGCTTTCAGTGAATTCTGTTCT | + |
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Preference number: 6 (lower is better) Translates to: NIWPVTEAAIRS*CCFCAFSEFCS Trigger: AGAACAGAATTCACTGAAAGCGCAAAAACAGCAGCAAGATCGGATTGCTGCCTCTGTAACAGGCCAGATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CCA 72 bp | TTTCATCGTCACTTGAAAGGCGAGAGGAATTACACTTaGTCTCAAGTGGGTAGAGTCCGTTTTGTAGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: FHRHLKGERNYT*SQVGRVRFVAQ Trigger: CTGAGCTACAAAACGGACTCTACCCACTTGAGACCAAGTGTAATTCCTCTCGCCTTTCAAGTGACGATGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | TCCTCTGGCATTGCTTCAAACAGTGTTCGCCTTCGCTaGGTAAACTCTTTCATGTCAGTCAAGATCTCATGC | + |
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Preference number: 6 (lower is better) Translates to: SSGIASNSVRLR*VNSFMSVKISC Trigger: GCATGAGATCTTGACTGACATGAAAGAGTTTACCAAGCGAAGGCGAACACTGTTTGAAGCAATGCCAGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 72 bp | GCATCCAGTTCCTCCAAATTAATATCTTGCCATTCGTaGGGCATGTCCTCAGCATCTATGTCAGCTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: ASSSSKLISCHS*GMSSASMSASL Trigger: CAGAGAAGCTGACATAGATGCTGAGGACATGCCCAACGAATGGCAAGATATTAATTTGGAGGAACTGGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | AAGAGTTTGCAGAGCCGGTGGAATAATGTGAGAAGATaGGCATTTTCTATCACATTCCCATGGCTATCTCGG | + |
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Preference number: 6 (lower is better) Translates to: KSLQSRWNNVRR*AFSITFPWLSR Trigger: CCGAGATAGCCATGGGAATGTGATAGAAAATGCTCATCTTCTCACATTATTCCACCGGCTCTGCAAACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS GCA 72 bp | TTCCAAGCAGCATTTTCTCTGCTAGATCATCACTGCTaGCAGACACTTTCTCATCGTTATCATCATCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: FQAAFSLLDHHC*QTLSHRYHHPE Trigger: CTCTGGATGATGATAACGATGAGAAAGTGTCTGGCAGCAGTGATGATCTAGCAGAGAAAATGCTGCTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | TGCATCTTTTTCAGAGAGATGTGTAGAAGCCTCGGATaGCTCTGTTTGAAGTTCACTATTGCTGACCACACT | + |
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Preference number: 6 (lower is better) Translates to: CIFFREMCRSLG*LCLKFTIADHT Trigger: AGTGTGGTCAGCAATAGTGAACTTCAAACAGAGTCATCCGAGGCTTCTACACATCTCTCTGAAAAAGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | TCATCGGTCTTCATCCTGTTCCAGCCAAAATACCTCTaGCAAAATTCTCTAATCTTGTCCACATCAGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSVFILFQPKYL*QNSLILSTSGL Trigger: CAAGCCTGATGTGGACAAGATTAGAGAATTTTGTCAGAGGTATTTTGGCTGGAACAGGATGAAGACCGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS CAA 90 bp | TCATTAGACTCCTCTGGCATTGCTTCAAACAGTGTTCGCCTTCGCTaGGTAAACTCTTTCATGTCAGTCAAGATCTCATGCTTTACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SLDSSGIASNSVRLR*VNSFMSVKISCFTS Trigger: TGAAGTAAAGCATGAGATCTTGACTGACATGAAAGAGTTTACCAAGCGAAGGCGAACACTGTTTGAAGCAATGCCAGAGGAGTCTAATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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| CDS TCA 72 bp | TTCCTCAGTATACATGTCACTGCTCTGTTTAGCCTATaGCTCTTTATGAGTTTGGCATCTTGTTTTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: FLSIHVTALFSL*LFMSLASCFSC Trigger: GCAGGAAAAACAAGATGCCAAACTCATAAAGAGTCATAGGCTAAACAGAGCAGTGACATGTATACTGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027214.4 |
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