Pregenerated sensors for ERCC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024382Ensembl transcript IDs: ENSMUST00000025241.7
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCAAACGATCACACCGGTaGAGAAAGAAGTCTCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAKRSHR*RKKSLF Trigger: GAAGAGAGACTTCTTTCTTCACCGGTGTGATCGTTT...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGGTGTCGTCTGCGCCTaGCAGGGAGCTCATGGTGCC | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGGVVCA*QGAHGA Trigger: GGCACCATGAGCTCCCTGTCAGGCGCAGACGACACC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGAGGGCACCGCCTCCTaGGACTCGTTCCCAGGAATG | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVEGTAS*DSFPGM Trigger: CATTCCTGGGAACGAGTCTCAGGAGGCGGTGCCCTC...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCCCGGAACATCCTGGCTaGAATGGTGTGCACCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGPEHPG*NGVHLV Trigger: GACGAGGTGCACACCATTCCAGCCAGGATGTTCCGG...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGCAGACACAGCCGAGTTaGCCAGGACGAGACAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVQTQPS*PGRDSA Trigger: AGCGCTGTCTCGTCCTGGGCAACTCGGCTGTGTCTG...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGCCTTGGCATCTGAGGTaGAGCGGCAGATCTGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVPWHLR*SGRSGC Trigger: ACAGCCAGATCTGCCGCTTCACCTCAGATGCCAAGG...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGGTACTCTAAGCAGATaGAGCGCTTCTGCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGGTLSR*SASAAP Trigger: AGGAGCTGCAGAAGCGCTGCATCTGCTTAGAGTACC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGATCCAAGTCGGTGGCTaGCAGCACCTTCTGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVIQVGG*QHLLQE Trigger: CTCCTGCAGAAGGTGCTGGCAGCCACCGACTTGGAT...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGCTTCCAAGAAAATGTaGCCATCAGGAGCCACCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGASKKM*PSGATQ Trigger: CTGGGTGGCTCCTGATGGCCACATTTTCTTGGAAGC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGCTGCATCCAAGTCGGTaGCTGCCAGCACCTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVLHPSR*LPAPSA Trigger: TGCAGAAGGTGCTGGCAGCCACCGACTTGGATGCAG...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGCTGTCATCGATGGTTaGCCACATCTTAAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGAVIDG*PHLKLG Trigger: GCCCAGTTTAAGATGTGGTCAACCATCGATGACAGC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGTGCAGGAGCTGCTGCTaGTCCTCTTTGGTGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVCRSCC*SSLVEN Trigger: GTTCTCCACCAAAGAGGAGCAGCAGCAGCTCCTGCA...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCCCATGGGAAGAGATCTaGATGAGGACATTGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGPWEEI*MRTLAS Trigger: AGAAGCCAATGTCCTCATTCAGATCTCTTCCCATGG...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTAGTCTCTGGGCTTCCTaGCGTCGGGAGCCACCATGG | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLSLWAS*RREPPW Trigger: CCATGGTGGCTCCCGACGGCAGGAAGCCCAGAGACT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCACATTCCCGGATCACTaGGTCTTGAAGAAGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGTFPDH*VLKKML Trigger: CAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGT...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGTTCTCCCTGGGACGTaGGCCCGTAGATATAAGGTT | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVVLPGT*ARRYKV Trigger: AACCTTATATCTACGGGCCCACGTCCCAGGGAGAAC...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCTCCTTTCATGAAACTTaGTCAGAAACTGGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGSFHET*SETGRL Trigger: GAGCCTGCCAGTTTCTGATCAAGTTTCATGAAAGGA...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGACTCATCCACTTTGGTaGTGGACTCGTCCACCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVTHPLW*WTRPPV Trigger: AACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGT...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCAACCCGTCCCAGTCTCTaGGCTTCCTGCCGTCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASTRPSL*ASCRRE Trigger: CTCCCGACGGCAGGAAGCCCAGAGACTGGGACGGGT...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGCGGATCACTGGGTCTTaGAGAAGATGCTGGATAACA | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVRITGS*RRCWIT Trigger: TGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCG...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTCCTCGTCAAGGATCATaGGGCCCCACTCCTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLPRQGS*GPTPGF Trigger: AAACCCAGGAGTGGGGCCTCATGATCCTTGACGAGG...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCGCTGCCAGCACCTTCTaGAGGAGCTGCTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAAASTF*RSCCCS Trigger: GGAGCAGCAGCAGCTCCTGCAGAAGGTGCTGGCAGC...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTCCACCCAGAGGGGCCTaGAGGTATGGTCACCCTTTA | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLPPRGA*RYGHPL Trigger: TAAAGGGTGACCATACCTCCAGGCCCCTCTGGGTGG...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGACCACATCTTAAACTaGGCTTTCCACTGCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVDHILN*AFHCST Trigger: TGTGGAGCAGTGGAAAGCCCAGTTTAAGATGTGGTC...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTCAACGGAGCAGCCGATaGGCTTGTCCTTGGCATCTG | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLQRSSR*ACPWHL Trigger: CAGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTG...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTCTTGTCCTTGGCATCTaGGGTGAAGCGGCAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLLVLGI*GEAADL Trigger: CAGATCTGCCGCTTCACCTCAGATGCCAAGGACAAG...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGTTTTGGGGTTGTGCTTaGAGTTCTGGAGAATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVFWGCA*SSGESA Trigger: TGCAGATTCTCCAGAACTTCAAGCACAACCCCAAAA...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCAACAGGGAGCTCATGGTaGCACAGCGTCGGGATGCCT | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASTGSSW*HSVGMP Trigger: AGGCATCCCGACGCTGTGGCACCATGAGCTCCCTGT...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTAGGGGCCTGGAGGTATaGTCACCCTTTAGTGGCATC | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLRGLEV*SPFSGI Trigger: GATGCCACTAAAGGGTGACCATACCTCCAGGCCCCT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGGIFVN*REGFQE Trigger: TTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTATGAGGCCCCACTCCTaGGTTTTGAGCCACTCCATG | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLMRPHS*VLSHSM Trigger: CATGGAGTGGCTCAAAACCCAGGAGTGGGGCCTCAT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCTTGTGCTTGAAGTTCTaGAGAATCTGCATACGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGLCLKF*RICIRS Trigger: AGAACGTATGCAGATTCTCCAGAACTTCAAGCACAA...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTGTGCATCTACCCCCTaGGAAGTAGAAGGCCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKACASTP*EVEGPP Trigger: TGGCGGGCCTTCTACTTCGCAGGGGGTAGATGCACA...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCACTTTCTGACAGTGCATaGGGCAGTCACGCCGACCAG | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASLSDSA*GSHADQ Trigger: CTGGTCGGCGTGACTGCCGCATGCACTGTCAGAAAG...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCACGTTTGAAAAGCGGGTaGACGTGCTTGCTGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASRLKSG*TCLLEA Trigger: GGCCTCCAGCAAGCACGTGCACCCGCTTTTCAAACG...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCGCTGCTGCTCCTCTTTaGTGGAGAACGCCAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAAAAPL*WRTPAP Trigger: AGGAGCTGGCGTTCTCCACCAAAGAGGAGCAGCAGC...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTTTGCTTCGGGAGGAGTaGTACTCCATGTACACGGTG | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLLLREE*YSMYTV Trigger: CACCGTGTACATGGAGTACCACTCCTCCCGAAGCAA...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCATTTGCAGCCCAACACTaGCCGCTGCATAGAGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASFAAQH*PLHRGS Trigger: ACTCCCTCTATGCAGCGGTCAGTGTTGGGCTGCAAA...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR TCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCACACAGGGAAGAACAATaGCTCCTGAGCGTGCTCGTC | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASHREEQ*LLSVLV Trigger: GACGAGCACGCTCAGGAGTCATTGTTCTTCCCTGTG...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTGTAATGTCACTGGTTTaGAGCCCAACACTGACCGCT | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLVMSLV*SPTLTA Trigger: AGCGGTCAGTGTTGGGCTGCAAACCAGTGACATTAC...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCATTCTGCAGGAGCTGCTaGTGCTCCTCTTTGGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASFCRSC*CSSLVE Trigger: CTCCACCAAAGAGGAGCAGCAGCAGCTCCTGCAGAA...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCGCAGCTCCATCCAGTTaGCTTCATAGAGCTTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAAAPSS*LHRAWA Trigger: GGCCCAAGCTCTATGAAGCCAACTGGATGGAGCTGC...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTACAAAGTACCTGTTGTaGTTGAGGACCAGCTTGACC | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLTKYLL*LRTSLT Trigger: GGTCAAGCTGGTCCTCAAGCACAACAGGTACTTTGT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTATGTACCCATTGTTCTaGAGCTCCATCCAGTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLMYPLF*SSIQLA Trigger: AGCCAACTGGATGGAGCTGCAGAACAATGGGTACAT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCACATCCACTTTGGTGCTaGACTCGTCCACCTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASHPLWC*TRPPVS Trigger: GGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATG...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR GCA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGTTTCTTTGTTTTGATTaGCACATACTCTCGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVFLCFD*HILSVE Trigger: TTCTACCGAGAGTATGTGGCAATCAAAACAAAGAAA...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS-3UTR CCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCCATACTCATCCACTTTaGTGCTGGACTCGTCCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAHTHPL*CWTRPP Trigger: AGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATG...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR TCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTTCCGTTTCTTTGTTTTaGTTGCCACATACTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLSVSLF*LPHTLG Trigger: ACCGAGAGTATGTGGCAATCAAAACAAAGAAACGGA...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCCAAACCTCAGCACACTaGACTTTAGCGATGTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAQTSAH*TLAMYP Trigger: TGGGTACATCGCTAAAGTCCAGTGTGCTGAGGTTTG...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTGTTTGTTCAGCCGAATaGCATATTCCTTCAAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLVCSAE*HIPSRQ Trigger: TTGCCTTGAAGGAATATGCCATTCGGCTGAACAAAC...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR TCA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTTCATTCCTCCTTTCATaGAACTTGATCAGAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLSFLLS*NLIRNW Trigger: CCAGTTTCTGATCAAGTTTCATGAAAGGAGGAATGA...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCCTGTCTGTAGTCCTTTaGTCCATACTCATCCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKALSVVL*SILIHF Trigger: AAAGTGGATGAGTATGGAGCAAAGGACTACAGACAG...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCCATACTGCCTCTTCTTaGATTTCTTTTTGTCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAHTASS*ISFCRG Trigger: ACCGCGACAAAAAGAAATCCAAGAAGAGGCAGTATG...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCATGGCTTCATAGAGCTTaGGCCCAATCAGGAAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASWLHRA*AQSGNL Trigger: TAAATTTCCTGATTGGGCCCAAGCTCTATGAAGCCA...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR GCA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCATTGATTTTGGGGTTGTaGTTGAAGTTCTGGAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: VAFLSFLNLGPTKAVKASLILGL*LKFWRI Trigger: GATTCTCCAGAACTTCAAGCACAACCCCAAAATCAA...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCAACTTGATCAGAAACTaGCAGGCTCTGAATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKANLIRN*QALNLL Trigger: CAACAAATTCAGAGCCTGCCAGTTTCTGATCAAGTT...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCTTCCTCTTCATACTaGCTCTTCTTGGATTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVAFLSFLNLGPTKAVKASSSSY*LFLDFF Trigger: AAAGAAATCCAAGAAGAGGCAGTATGAAGAGGAAGA...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 90 bp | GCTCCACAGACACAGCCGAGTTGCCCAGGACGAGACAGCGCTTTCTaGCAGTGCATGCGGCAGTCACGCCGACCAGGGACTTCCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: APQTQPSCPGRDSAF*QCMRQSRRPGTSQH Trigger: GTGCTGGGAAGTCCCTGGTCGGCGTGACTGCCGCATGCACTGTCAGAAAGCGCTGTCTCGTCCTGGGCAACTCGGCTGTGTCTGTGGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 90 bp | GCTTCGGGAGGAGTGGTACTCCATGTACACGGTGTCGTCTGCGCCTaGCAGGGAGCTCATGGTGCCACAGCGTCGGGATGCCTGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASGGVVLHVHGVVCA*QGAHGATASGCLAR Trigger: TCTGGCCAGGCATCCCGACGCTGTGGCACCATGAGCTCCCTGTCAGGCGCAGACGACACCGTGTACATGGAGTACCACTCCTCCCGAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | CACAGCCGAGTTGCCCAGGACGAGACAGCGCTTTCTGACAGTGCATaGGGCAGTCACGCCGACCAGGGACTTCCCAGCACCACAGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSRVAQDETALSDSA*GSHADQGLPSTTGK Trigger: CTTCCCTGTGGTGCTGGGAAGTCCCTGGTCGGCGTGACTGCCGCATGCACTGTCAGAAAGCGCTGTCTCGTCCTGGGCAACTCGGCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | AAAAGCGGGTGCACGTGCTTGCTGGAGGCCTTGCTTCGGGAGGAGTaGTACTCCATGTACACGGTGTCGTCTGCGCCTGACAGGGAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSGCTCLLEALLREE*YSMYTVSSAPDREL Trigger: GAGCTCCCTGTCAGGCGCAGACGACACCGTGTACATGGAGTACCACTCCTCCCGAAGCAAGGCCTCCAGCAAGCACGTGCACCCGCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 90 bp | GCCGACCAGGGACTTCCCAGCACCACAGGGAAGAACAATGACTCCTaGGCGTGCTCGTCCGTTCCCAAACATCTTCCGCAGGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ADQGLPSTTGKNNDS*ACSSVPKHLPQALL Trigger: GAGAAGAGCCTGCGGAAGATGTTTGGGAACGGACGAGCACGCTCAGGAGTCATTGTTCTTCCCTGTGGTGCTGGGAAGTCCCTGGTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | GCATCTGCTGTCTGTAGTCCTTTGCTCCATACTCATCCACTTTGGTaGTGGACTCGTCCACCTGTTTCCCAGCGGCGGAGGGCACCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: ASAVCSPLLHTHPLW*WTRPPVSQRRRAPP Trigger: AGGCGGTGCCCTCCGCCGCTGGGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATGGAGCAAAGGACTACAGACAGCAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | TCTGCTGTCTGTAGTCCTTTGCTCCATACTCATCCACTTTGGTGCTaGACTCGTCCACCTGTTTCCCAGCGGCGGAGGGCACCGCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: SAVCSPLLHTHPLWC*TRPPVSQRRRAPPP Trigger: AGGAGGCGGTGCCCTCCGCCGCTGGGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATGGAGCAAAGGACTACAGACAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | GTGGCATCTGCTGTCTGTAGTCCTTTGCTCCATACTCATCCACTTTaGTGCTGGACTCGTCCACCTGTTTCCCAGCGGCGGAGGGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VASAVCSPLLHTHPL*CWTRPPVSQRRRAP Trigger: CGGTGCCCTCCGCCGCTGGGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATGGAGCAAAGGACTACAGACAGCAGATGCCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | ACAGTGCGCCTGCACAATAGTCAGAACCCGCCGGAACATCCTGGCTaGAATGGTGTGCACCTCGTCAAGGATCATGAGGCCCCACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TVRLHNSQNPPEHPG*NGVHLVKDHEAPLL Trigger: CAGGAGTGGGGCCTCATGATCCTTGACGAGGTGCACACCATTCCAGCCAGGATGTTCCGGCGGGTTCTGACTATTGTGCAGGCGCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGCTTCCCAGGACCTTTaGGTGGTGTGGCCCAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGASQDL*VVWPSI Trigger: TATGCTGGGCCACACCACCAAAAGGTCCTGGGAAGC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | TGCACAATAGTCAGAACCCGCCGGAACATCCTGGCTGGAATGGTGTaGACCTCGTCAAGGATCATGAGGCCCCACTCCTGGGTTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: CTIVRTRRNILAGMV*TSSRIMRPHSWVLS Trigger: GCTCAAAACCCAGGAGTGGGGCCTCATGATCCTTGACGAGGTGCACACCATTCCAGCCAGGATGTTCCGGCGGGTTCTGACTATTGTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | GGTGGCCTCGCCCTCGGCGTTCCTCAAGCGACATTCCCGGATCACTaGGTCTTGAAGAAGATGCTGGATAACATCAGGGTGGGAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GGLALGVPQATFPDH*VLKKMLDNIRVGTF Trigger: GAAAGTTCCCACCCTGATGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGTCGCTTGAGGAACGCCGAGGGCGAGGCCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | GCTGGAATGGTGTGCACCTCGTCAAGGATCATGAGGCCCCACTCCTaGGTTTTGAGCCACTCCATGACTCTCTCAGCTTCCCAGGACCTT | + |
|
Preference number: 5 (lower is better) Translates to: AGMVCTSSRIMRPHS*VLSHSMTLSASQDL Trigger: AAGGTCCTGGGAAGCTGAGAGAGTCATGGAGTGGCTCAAAACCCAGGAGTGGGGCCTCATGATCCTTGACGAGGTGCACACCATTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGACACCGGCTCTGCAATaGCCACCAGGAAGTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVTPALQ*PPGSLG Trigger: CCCAAGACTTCCTGGTGGCAATTGCAGAGCCGGTGT...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGCCCCACTCCTGGGTTTaGAGCCACTCCATGACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVPHSWV*SHSMTL Trigger: GAGAGTCATGGAGTGGCTCAAAACCCAGGAGTGGGG...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCCTTCCCGGACAAGGGTaGCAGTCAAACCAAGCTTAC | + |
|
Preference number: 5 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGLPGQG*QSNQAY Trigger: GTAAGCTTGGTTTGACTGCAACCCTTGTCCGGGAAG...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | TCTTCCCGGACAAGGGTTGCAGTCAAACCAAGCTTACAGTGCGCCTaGACAATAGTCAGAACCCGCCGGAACATCCTGGCTGGAATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRTRVAVKPSLQCA*TIVRTRRNILAGMV Trigger: CACCATTCCAGCCAGGATGTTCCGGCGGGTTCTGACTATTGTGCAGGCGCACTGTAAGCTTGGTTTGACTGCAACCCTTGTCCGGGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | AAGCGGCAGATCTGGCTGTCATCGATGGTTGACCACATCTTAAACTaGGCTTTCCACTGCTCCACAGACACAGCCGAGTTGCCCAGGACG | + |
|
Preference number: 5 (lower is better) Translates to: KRQIWLSSMVDHILN*AFHCSTDTAELPRT Trigger: CGTCCTGGGCAACTCGGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTTTAAGATGTGGTCAACCATCGATGACAGCCAGATCTGCCGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCCCGGATCACTGGGTCTaGAAGAAGATGCTGGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGPDHWV*KKMLDN Trigger: GTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGG...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCTTAGCGATGTACCCATaGTTCTGCAGCTCCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGLAMYP*FCSSIQ Trigger: CTGGATGGAGCTGCAGAACAATGGGTACATCGCTAA...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 90 bp | AGTCTCTGGGCTTCCTGCCGTCGGGAGCCACCATGGGAAGAGATCTaGATGAGGACATTGGCTTCTGGCAGATCAAAGGATGTGTCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLWASCRREPPWEEI*MRTLASGRSKDVSP Trigger: TGGTGACACATCCTTTGATCTGCCAGAAGCCAATGTCCTCATTCAGATCTCTTCCCATGGTGGCTCCCGACGGCAGGAAGCCCAGAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | CTCATAAAAATCAAACAGGTCTTTGGGTATGTCAGACGTGGCCTGTaGATCTACCCCCTGCGAAGTAGAAGGCCCGCCACTGCCTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LIKIKQVFGYVRRGL*IYPLRSRRPATAFR Trigger: GCGGAAGGCAGTGGCGGGCCTTCTACTTCGCAGGGGGTAGATGCACAGGCCACGTCTGACATACCCAAAGACCTGTTTGATTTTTATGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | TGGCTGTCATCGATGGTTGACCACATCTTAAACTGGGCTTTCCACTaGTCCACAGACACAGCCGAGTTGCCCAGGACGAGACAGCGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WLSSMVDHILNWAFH*STDTAELPRTRQRF Trigger: AAAGCGCTGTCTCGTCCTGGGCAACTCGGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTTTAAGATGTGGTCAACCATCGATGACAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | TTGTCATCTTCCCGGACAAGGGTTGCAGTCAAACCAAGCTTACAGTaGGCCTGCACAATAGTCAGAACCCGCCGGAACATCCTGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSSRTRVAVKPSLQ*ACTIVRTRRNILAG Trigger: TCCAGCCAGGATGTTCCGGCGGGTTCTGACTATTGTGCAGGCGCACTGTAAGCTTGGTTTGACTGCAACCCTTGTCCGGGAAGATGACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | CAGCCGATGGGCTTGTCCTTGGCATCTGAGGTGAAGCGGCAGATCTaGCTGTCATCGATGGTTGACCACATCTTAAACTGGGCTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPMGLSLASEVKRQI*LSSMVDHILNWAFH Trigger: GTGGAAAGCCCAGTTTAAGATGTGGTCAACCATCGATGACAGCCAGATCTGCCGCTTCACCTCAGATGCCAAGGACAAGCCCATCGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGAGTAATGTCACTGGTTaGCAGCCCAACACTGACCGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVSNVTG*QPNTDR Trigger: GCGGTCAGTGTTGGGCTGCAAACCAGTGACATTACT...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCGATGTGTCACCAACCTaGGAGATGAAGATGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGDVSPT*EMKMVL Trigger: CAACACCATCTTCATCTCCAAGGTTGGTGACACATC...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTCCGATGGGCTTGTCCTaGGCATCTGAGGTGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLPMGLS*ASEVKR Trigger: CCGCTTCACCTCAGATGCCAAGGACAAGCCCATCGG...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 90 bp | TCGCCCTCGGCGTTCCTCAAGCGACATTCCCGGATCACTGGGTCTTaGAGAAGATGCTGGATAACATCAGGGTGGGAACTTTCAACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SPSAFLKRHSRITGS*RRCWITSGWELSTK Trigger: CTTTGTTGAAAGTTCCCACCCTGATGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGTCGCTTGAGGAACGCCGAGGGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | TGTGTCCTGAGATACCAGGGAGTAGAAAAAGGCATTGTATTCCTCTaGGACCATCCCTTTCTTGGCTCTGAGTACCCGTCCCAGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CVLRYQGVEKGIVFL*DHPFLGSEYPSQSL Trigger: CAGAGACTGGGACGGGTACTCAGAGCCAAGAAAGGGATGGTCGCAGAGGAATACAATGCCTTTTTCTACTCCCTGGTATCTCAGGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | CGGCTCTGCAATTGCCACCAGGAAGTCTTGGGCATATTTGTAAACTaGAGAGAAGGCTTCCAAGAAAATGTGGCCATCAGGAGCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLCNCHQEVLGIFVN*REGFQENVAIRSHP Trigger: TGGGTGGCTCCTGATGGCCACATTTTCTTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCCTGGTGGCAATTGCAGAGCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCGAGCAGCCGATGGGCTaGTCCTTGGCATCTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAEQPMG*SLASEV Trigger: CACCTCAGATGCCAAGGACAAGCCCATCGGCTGCTC...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGATTTTGGGGTTGTGCTaGAAGTTCTGGAGAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVILGLC*KFWRIC Trigger: GCAGATTCTCCAGAACTTCAAGCACAACCCCAAAAT...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | CTTGTATTCATGTACATGAGTAGGCCGGCACACCGGCTCTGCAATTaGCACCAGGAAGTCTTGGGCATATTTGTAAACTGGAGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LVFMYMSRPAHRLCN*HQEVLGIFVNWREG Trigger: GCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCCTGGTGGCAATTGCAGAGCCGGTGTGCCGGCCTACTCATGTACATGAATACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | TACTCTAAGCAGATGCAGCGCTTCTGCAGCTCCTCGATCATTTCCTaGTTAACTTCAAAGGACACTGTCTGTGTCTCTTCCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YSKQMQRFCSSSIIS*LTSKDTVCVSSSSS Trigger: GGAGGAGGAGGAAGAGACACAGACAGTGTCCTTTGAAGTTAAGCAGGAAATGATCGAGGAGCTGCAGAAGCGCTGCATCTGCTTAGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 90 bp | TCGGGAGCCACCATGGGAAGAGATCTGAATGAGGACATTGGCTTCTaGCAGATCAAAGGATGTGTCACCAACCTTGGAGATGAAGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SGATMGRDLNEDIGF*QIKGCVTNLGDEDG Trigger: ACCATCTTCATCTCCAAGGTTGGTGACACATCCTTTGATCTGCCAGAAGCCAATGTCCTCATTCAGATCTCTTCCCATGGTGGCTCCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | TCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGGGCCTCATCCTTGTCCATTaGCTCATAAAAATCAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SLFNTDPGSQSSPEHRVGLILVH*LIKIKQ Trigger: CTGTTTGATTTTTATGAGCAAATGGACAAGGATGAG...GCCCACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 90 bp | GTTGGGATTCATGGTGTACAACAGGATCCGTTTCTTTGTTTTGATTaGCACATACTCTCGGTAGAACTCGGGAGACATCGGGCACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VGIHGVQQDPFLCFD*HILSVELGRHRAPN Trigger: GTTTGGTGCCCGATGTCTCCCGAGTTCTACCGAGAGTATGTGGCAATCAAAACAAAGAAACGGATCCTGTTGTACACCATGAATCCCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | AAGTCTCTCTTCAACACGGATCCAGGCAGCCAGTCTTCACCTGAGCACAGGGTGTTCAAGGCAAATACGTaGTCAGCAAAGACAATAATC | + |
|
Preference number: 5 (lower is better) Translates to: KSLFNTDPGSQSSPEHRVFKANT*SAKTII Trigger: GATTATTGTCTTTGCTGACAACGTATTTGCCTTGAA...CACCCTGTGCTCAGGTGAAGACTGGCTGCCTGGATCCGTGTTGAAGAGAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 90 bp | ATTTGTTGGGATTCATGGTGTACAACAGGATCCGTTTCTTTGTTTTaGTTGCCACATACTCTCGGTAGAACTCGGGAGACATCGGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: ICWDSWCTTGSVSLF*LPHTLGRTRETSGT Trigger: GGTGCCCGATGTCTCCCGAGTTCTACCGAGAGTATGTGGCAATCAAAACAAAGAAACGGATCCTGTTGTACACCATGAATCCCAACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCAAGTACCTGTTGTGCTaGAGGACCAGCTTGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVAFLSFLNLGPTKAVKAKYLLC*RTSLTF Trigger: GAAGGTCAAGCTGGTCCTCAAGCACAACAGGTACTT...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCAGCTGTCTGTAGTCCTTaGCTCCATACTCATCCACTT | + |
|
Preference number: 5 (lower is better) Translates to: VAFLSFLNLGPTKAVKASAVCSP*LHTHPL Trigger: AAGTGGATGAGTATGGAGCAAAGGACTACAGACAGC...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | ACAGTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTGCCACCAGGAAGTCTaGGGCATATTTGTAAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: TVAFLSFLNLGPTKAVKACHQEV*GIFVNW Trigger: CCAGTTTACAAATATGCCCAAGACTTCCTGGTGGCA...GGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTATCCGTTTCTTTGTTTaGATTGCCACATACTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLIRFFV*IATYSR Trigger: CCGAGAGTATGTGGCAATCAAAACAAAGAAACGGAT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | GGCCTCACACTGACTGGTTTTCAGCAGTCAGTCAATAGGAAAGGACACAGTCTTAAGATGGTGTTGATTTaGGGGTTGTGCTTGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLTLTGFQQSVNRKGHSLKMVLI*GLCLKF Trigger: GAACTTCAAGCACAACCCCAAAATCAACACCATCTT...AAGACTGTGTCCTTTCCTATTGACTGACTGCTGAAAACCAGTCAGTGTGAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS-3UTR CAA 90 bp | GTAGCTTTTCTTTCCTTTTTAAACCTAGGACCCACGAAGGCAGTTAAGGCCTCATCATACTGCCTCTTCTaGGATTTCTTTTTGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VAFLSFLNLGPTKAVKASSYCLF*DFFLSR Trigger: CCGCGACAAAAAGAAATCCAAGAAGAGGCAGTATGA...TGAGGCCTTAACTGCCTTCGTGGGTCCTAGGTTTAAAAAGGAAAGAAAAGCTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | GTTGCCCAGGACGAGACAGCGCTTTCTGACAGTGCATaGGGCAGTCACGCCGACCAGGGACTTCCCAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: VAQDETALSDSA*GSHADQGLPST Trigger: GGTGCTGGGAAGTCCCTGGTCGGCGTGACTGCCGCATGCACTGTCAGAAAGCGCTGTCTCGTCCTGGGCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | TCCACCTGTTTCCCAGCGGCGGAGGGCACCGCCTCCTaGGACTCGTTCCCAGGAATGTCGTCTTCGTCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: STCFPAAEGTAS*DSFPGMSSSSS Trigger: GGAAGACGAAGACGACATTCCTGGGAACGAGTCTCAGGAGGCGGTGCCCTCCGCCGCTGGGAAACAGGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | ACACAGCCGAGTTGCCCAGGACGAGACAGCGCTTTCTaGCAGTGCATGCGGCAGTCACGCCGACCAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: TQPSCPGRDSAF*QCMRQSRRPGT Trigger: AGTCCCTGGTCGGCGTGACTGCCGCATGCACTGTCAGAAAGCGCTGTCTCGTCCTGGGCAACTCGGCTGTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | GGAGTGGTACTCCATGTACACGGTGTCGTCTGCGCCTaGCAGGGAGCTCATGGTGCCACAGCGTCGGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: GVVLHVHGVVCA*QGAHGATASGC Trigger: GCATCCCGACGCTGTGGCACCATGAGCTCCCTGTCAGGCGCAGACGACACCGTGTACATGGAGTACCACTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | GTCAGAACCCGCCGGAACATCCTGGCTGGAATGGTGTaGACCTCGTCAAGGATCATGAGGCCCCACTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VRTRRNILAGMV*TSSRIMRPHSW Trigger: CCAGGAGTGGGGCCTCATGATCCTTGACGAGGTGCACACCATTCCAGCCAGGATGTTCCGGCGGGTTCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | TGCACGTGCTTGCTGGAGGCCTTGCTTCGGGAGGAGTaGTACTCCATGTACACGGTGTCGTCTGCGCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: CTCLLEALLREE*YSMYTVSSAPD Trigger: GTCAGGCGCAGACGACACCGTGTACATGGAGTACCACTCCTCCCGAAGCAAGGCCTCCAGCAAGCACGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | CGGAGCAGCCGATGGGCTTGTCCTTGGCATCTGAGGTaGAGCGGCAGATCTGGCTGTCATCGATGGTTGACC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRWACPWHLR*SGRSGCHRWLT Trigger: GGTCAACCATCGATGACAGCCAGATCTGCCGCTTCACCTCAGATGCCAAGGACAAGCCCATCGGCTGCTCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | GGCAACGGAGCAGCCGATGGGCTTGTCCTTGGCATCTaGGGTGAAGCGGCAGATCTGGCTGTCATCGATGGT | + |
|
Preference number: 6 (lower is better) Translates to: GNGAADGLVLGI*GEAADLAVIDG Trigger: ACCATCGATGACAGCCAGATCTGCCGCTTCACCTCAGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 90 bp | TTCCTGAAGCGTTTGAAAAGCGGGTGCACGTGCTTGCTGGAGGCCTaGCTTCGGGAGGAGTGGTACTCCATGTACACGGTGTCGTCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: FLKRLKSGCTCLLEA*LREEWYSMYTVSSA Trigger: CGCAGACGACACCGTGTACATGGAGTACCACTCCTCCCGAAGCAAGGCCTCCAGCAAGCACGTGCACCCGCTTTTCAAACGCTTCAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | GTGCTAATGGCAACGGAGCAGCCGATGGGCTTGTCCTaGGCATCTGAGGTGAAGCGGCAGATCTGGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: VLMATEQPMGLS*ASEVKRQIWLS Trigger: TGACAGCCAGATCTGCCGCTTCACCTCAGATGCCAAGGACAAGCCCATCGGCTGCTCCGTTGCCATTAGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | CGTTTGAAAAGCGGGTGCACGTGCTTGCTGGAGGCCTaGCTTCGGGAGGAGTGGTACTCCATGTACACGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RLKSGCTCLLEA*LREEWYSMYTV Trigger: CACCGTGTACATGGAGTACCACTCCTCCCGAAGCAAGGCCTCCAGCAAGCACGTGCACCCGCTTTTCAAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | CACTTCCTGAAGCGTTTGAAAAGCGGGTGCACGTGCTaGCTGGAGGCCTTGCTTCGGGAGGAGTGGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: HFLKRLKSGCTC*LEALLREEWYS Trigger: GGAGTACCACTCCTCCCGAAGCAAGGCCTCCAGCAAGCACGTGCACCCGCTTTTCAAACGCTTCAGGAAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 90 bp | GAAGGCCCGCCACTGCCTTCCGCCGCCGTCTTAGAAATAGCAGATTaGCTTGTAAAAGTCTCTGTGATGAGTTCGGTGGCCTCGCCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EGPPLPSAAVLEIAD*LVKVSVMSSVASPS Trigger: CGAGGGCGAGGCCACCGAACTCATCACAGAGACTTTTACAAGCAAATCTGCTATTTCTAAGACGGCGGCGGAAGGCAGTGGCGGGCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 90 bp | CACATCTTAAACTGGGCTTTCCACTGCTCCACAGACACAGCCGAGTaGCCCAGGACGAGACAGCGCTTTCTGACAGTGCATGCGGCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HILNWAFHCSTDTAE*PRTRQRFLTVHAAV Trigger: GACTGCCGCATGCACTGTCAGAAAGCGCTGTCTCGTCCTGGGCAACTCGGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTTTAAGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | GGACTTCCCAGCACCACAGGGAAGAACAATGACTCCTaGGCGTGCTCGTCCGTTCCCAAACATCTTCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: GLPSTTGKNNDS*ACSSVPKHLPQ Trigger: CTGCGGAAGATGTTTGGGAACGGACGAGCACGCTCAGGAGTCATTGTTCTTCCCTGTGGTGCTGGGAAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | GTCTGTAGTCCTTTGCTCCATACTCATCCACTTTGGTaGTGGACTCGTCCACCTGTTTCCCAGCGGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VCSPLLHTHPLW*WTRPPVSQRRR Trigger: CCTCCGCCGCTGGGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATGGAGCAAAGGACTACAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | TGTAGTCCTTTGCTCCATACTCATCCACTTTGGTGCTaGACTCGTCCACCTGTTTCCCAGCGGCGGAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: CSPLLHTHPLWC*TRPPVSQRRRA Trigger: TGCCCTCCGCCGCTGGGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATGGAGCAAAGGACTACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | GCTGTCTGTAGTCCTTTGCTCCATACTCATCCACTTTaGTGCTGGACTCGTCCACCTGTTTCCCAGCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: AVCSPLLHTHPL*CWTRPPVSQRR Trigger: CCGCCGCTGGGAAACAGGTGGACGAGTCCAGCACCAAAGTGGATGAGTATGGAGCAAAGGACTACAGACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | AGAAAATGTGGCCATCAGGAGCCACCCAGAGGGGCCTaGAGGTATGGTCACCCTTTAGTGGCATCTGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: RKCGHQEPPRGA*RYGHPLVASAV Trigger: GACAGCAGATGCCACTAAAGGGTGACCATACCTCCAGGCCCCTCTGGGTGGCTCCTGATGGCCACATTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | GTGTGCACCTCGTCAAGGATCATGAGGCCCCACTCCTaGGTTTTGAGCCACTCCATGACTCTCTCAGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: VCTSSRIMRPHS*VLSHSMTLSAS Trigger: GGAAGCTGAGAGAGTCATGGAGTGGCTCAAAACCCAGGAGTGGGGCCTCATGATCCTTGACGAGGTGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | CTGCACAATAGTCAGAACCCGCCGGAACATCCTGGCTaGAATGGTGTGCACCTCGTCAAGGATCATGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LHNSQNPPEHPG*NGVHLVKDHEA Trigger: GGCCTCATGATCCTTGACGAGGTGCACACCATTCCAGCCAGGATGTTCCGGCGGGTTCTGACTATTGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | AACTGGGCTTTCCACTGCTCCACAGACACAGCCGAGTaGCCCAGGACGAGACAGCGCTTTCTGACAGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: NWAFHCSTDTAE*PRTRQRFLTVH Trigger: ATGCACTGTCAGAAAGCGCTGTCTCGTCCTGGGCAACTCGGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | ACCTCGTCAAGGATCATGAGGCCCCACTCCTGGGTTTaGAGCCACTCCATGACTCTCTCAGCTTCCCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: TSSRIMRPHSWV*SHSMTLSASQD Trigger: GTCCTGGGAAGCTGAGAGAGTCATGGAGTGGCTCAAAACCCAGGAGTGGGGCCTCATGATCCTTGACGAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 90 bp | ATGGTGTGCACCTCGTCAAGGATCATGAGGCCCCACTCCTGGGTTTaGAGCCACTCCATGACTCTCTCAGCTTCCCAGGACCTTTTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: MVCTSSRIMRPHSWV*SHSMTLSASQDLLV Trigger: CACCAAAAGGTCCTGGGAAGCTGAGAGAGTCATGGAGTGGCTCAAAACCCAGGAGTGGGGCCTCATGATCCTTGACGAGGTGCACACCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | ATCAAACAGGTCTTTGGGTATGTCAGACGTGGCCTGTaGATCTACCCCCTGCGAAGTAGAAGGCCCGCCACT | + |
|
Preference number: 6 (lower is better) Translates to: IKQVFGYVRRGL*IYPLRSRRPAT Trigger: AGTGGCGGGCCTTCTACTTCGCAGGGGGTAGATGCACAGGCCACGTCTGACATACCCAAAGACCTGTTTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | TCCCGGACAAGGGTTGCAGTCAAACCAAGCTTACAGTaGGCCTGCACAATAGTCAGAACCCGCCGGAACATC | + |
|
Preference number: 6 (lower is better) Translates to: SRTRVAVKPSLQ*ACTIVRTRRNI Trigger: GATGTTCCGGCGGGTTCTGACTATTGTGCAGGCGCACTGTAAGCTTGGTTTGACTGCAACCCTTGTCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | GCCCTCGGCGTTCCTCAAGCGACATTCCCGGATCACTaGGTCTTGAAGAAGATGCTGGATAACATCAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ALGVPQATFPDH*VLKKMLDNIRV Trigger: CACCCTGATGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGTCGCTTGAGGAACGCCGAGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | GCTTCCTGCCGTCGGGAGCCACCATGGGAAGAGATCTaGATGAGGACATTGGCTTCTGGCAGATCAAAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: ASCRREPPWEEI*MRTLASGRSKD Trigger: ATCCTTTGATCTGCCAGAAGCCAATGTCCTCATTCAGATCTCTTCCCATGGTGGCTCCCGACGGCAGGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | TCGATGGTTGACCACATCTTAAACTGGGCTTTCCACTaGTCCACAGACACAGCCGAGTTGCCCAGGACGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SMVDHILNWAFH*STDTAELPRTR Trigger: TCTCGTCCTGGGCAACTCGGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTTTAAGATGTGGTCAACCATCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS GCA 72 bp | ACAAGGGTTGCAGTCAAACCAAGCTTACAGTGCGCCTaGACAATAGTCAGAACCCGCCGGAACATCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TRVAVKPSLQCA*TIVRTRRNILA Trigger: AGCCAGGATGTTCCGGCGGGTTCTGACTATTGTGCAGGCGCACTGTAAGCTTGGTTTGACTGCAACCCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 90 bp | GGTCTGAGTACGGCTGTGGGCTTCAGGTCAATGTTGATGTCAGGATaGAGAGTGTCATTCCGGAAGTCATACTCTGCCAGCAGCGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: GLSTAVGFRSMLMSG*RVSFRKSYSASSGY Trigger: GTACCCGCTGCTGGCAGAGTATGACTTCCGGAATGACACTCTCAATCCTGACATCAACATTGACCTGAAGCCCACAGCCGTACTCAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | GGCTTGTCCTTGGCATCTGAGGTGAAGCGGCAGATCTaGCTGTCATCGATGGTTGACCACATCTTAAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLSLASEVKRQI*LSSMVDHILNW Trigger: CCAGTTTAAGATGTGGTCAACCATCGATGACAGCCAGATCTGCCGCTTCACCTCAGATGCCAAGGACAAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | CCGGCACACCGGCTCTGCAATTGCCACCAGGAAGTCTaGGGCATATTTGTAAACTGGAGAGAAGGCTTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PAHRLCNCHQEV*GIFVNWREGFQ Trigger: TTGGAAGCCTTCTCTCCAGTTTACAAATATGCCCAAGACTTCCTGGTGGCAATTGCAGAGCCGGTGTGCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | GGCGTTCCTCAAGCGACATTCCCGGATCACTGGGTCTaGAAGAAGATGCTGGATAACATCAGGGTGGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: GVPQATFPDHWV*KKMLDNIRVGT Trigger: AGTTCCCACCCTGATGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGTCGCTTGAGGAACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 72 bp | AAAAAGGCATTGTATTCCTCTGCGACCATCCCTTTCTaGGCTCTGAGTACCCGTCCCAGTCTCTGGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: KKALYSSATIPF*ALSTRPSLWAS Trigger: GGAAGCCCAGAGACTGGGACGGGTACTCAGAGCCAAGAAAGGGATGGTCGCAGAGGAATACAATGCCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CAA 90 bp | CTCGCCCTCGGCGTTCCTCAAGCGACATTCCCGGATCACTGGGTCTaGAAGAAGATGCTGGATAACATCAGGGTGGGAACTTTCAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LALGVPQATFPDHWV*KKMLDNIRVGTFNK Trigger: TTTGTTGAAAGTTCCCACCCTGATGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGTCGCTTGAGGAACGCCGAGGGCGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS TCA 72 bp | GCGTTCCTCAAGCGACATTCCCGGATCACTGGGTCTTaGAGAAGATGCTGGATAACATCAGGGTGGGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: AFLKRHSRITGS*RRCWITSGWEL Trigger: AAGTTCCCACCCTGATGTTATCCAGCATCTTCTTCAAGACCCAGTGATCCGGGAATGTCGCTTGAGGAACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | ATCTGGCTGTCATCGATGGTTGACCACATCTTAAACTaGGCTTTCCACTGCTCCACAGACACAGCCGAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: IWLSSMVDHILN*AFHCSTDTAEL Trigger: CAACTCGGCTGTGTCTGTGGAGCAGTGGAAAGCCCAGTTTAAGATGTGGTCAACCATCGATGACAGCCAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
||
| CDS CCA 72 bp | AGTTCTGGAGAATCTGCATACGTTCTCCCTGGGACGTaGGCCCGTAGATATAAGGTTTGTTCAGCCGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGESAYVLPGT*ARRYKVCSAEW Trigger: CCATTCGGCTGAACAAACCTTATATCTACGGGCCCACGTCCCAGGGAGAACGTATGCAGATTCTCCAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 72 bp | CCACTGCCTTCCGCCGCCGTCTTAGAAATAGCAGATTaGCTTGTAAAAGTCTCTGTGATGAGTTCGGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: PLPSAAVLEIAD*LVKVSVMSSVA Trigger: GGCCACCGAACTCATCACAGAGACTTTTACAAGCAAATCTGCTATTTCTAAGACGGCGGCGGAAGGCAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 72 bp | ACGGCTGTGGGCTTCAGGTCAATGTTGATGTCAGGATaGAGAGTGTCATTCCGGAAGTCATACTCTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: TAVGFRSMLMSG*RVSFRKSYSAS Trigger: GCTGGCAGAGTATGACTTCCGGAATGACACTCTCAATCCTGACATCAACATTGACCTGAAGCCCACAGCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 90 bp | TCACCAACCTTGGAGATGAAGATGGTGTTGATTTTGGGGTTGTGCTaGAAGTTCTGGAGAATCTGCATACGTTCTCCCTGGGACGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SPTLEMKMVLILGLC*KFWRICIRSPWDVG Trigger: GCCCACGTCCCAGGGAGAACGTATGCAGATTCTCCAGAACTTCAAGCACAACCCCAAAATCAACACCATCTTCATCTCCAAGGTTGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS GCA 72 bp | GTATTCATGTACATGAGTAGGCCGGCACACCGGCTCTaGAATTGCCACCAGGAAGTCTTGGGCATATTTGTA | + |
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Preference number: 6 (lower is better) Translates to: VFMYMSRPAHRL*NCHQEVLGIFV Trigger: TACAAATATGCCCAAGACTTCCTGGTGGCAATTGCAGAGCCGGTGTGCCGGCCTACTCATGTACATGAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS GCA 72 bp | CAGATGCAGCGCTTCTGCAGCTCCTCGATCATTTCCTaGTTAACTTCAAAGGACACTGTCTGTGTCTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: QMQRFCSSSIIS*LTSKDTVCVSS Trigger: GGAAGAGACACAGACAGTGTCCTTTGAAGTTAAGCAGGAAATGATCGAGGAGCTGCAGAAGCGCTGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS GCA 72 bp | AGATACCAGGGAGTAGAAAAAGGCATTGTATTCCTCTaGGACCATCCCTTTCTTGGCTCTGAGTACCCGTCC | + |
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Preference number: 6 (lower is better) Translates to: RYQGVEKGIVFL*DHPFLGSEYPS Trigger: GGACGGGTACTCAGAGCCAAGAAAGGGATGGTCGCAGAGGAATACAATGCCTTTTTCTACTCCCTGGTATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CCA 72 bp | AAGATGGTGTTGATTTTGGGGTTGTGCTTGAAGTTCTaGAGAATCTGCATACGTTCTCCCTGGGACGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: KMVLILGLCLKF*RICIRSPWDVG Trigger: GCCCACGTCCCAGGGAGAACGTATGCAGATTCTCCAGAACTTCAAGCACAACCCCAAAATCAACACCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 72 bp | ACTGAGCTTTCTGAGGTACTCAGTAATGTCACTGGTTaGCAGCCCAACACTGACCGCTGCATAGAGGGAGTA | + |
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Preference number: 6 (lower is better) Translates to: TELSEVLSNVTG*QPNTDRCIEGV Trigger: TACTCCCTCTATGCAGCGGTCAGTGTTGGGCTGCAAACCAGTGACATTACTGAGTACCTCAGAAAGCTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS GCA 72 bp | CATGGTGTACAACAGGATCCGTTTCTTTGTTTTGATTaGCACATACTCTCGGTAGAACTCGGGAGACATCGG | + |
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Preference number: 6 (lower is better) Translates to: HGVQQDPFLCFD*HILSVELGRHR Trigger: CCGATGTCTCCCGAGTTCTACCGAGAGTATGTGGCAATCAAAACAAAGAAACGGATCCTGTTGTACACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 90 bp | TCAAAGGATGTGTCACCAACCTTGGAGATGAAGATGGTGTTGATTTaGGGGTTGTGCTTGAAGTTCTGGAGAATCTGCATACGTTCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SKDVSPTLEMKMVLI*GLCLKFWRICIRSP Trigger: GGGAGAACGTATGCAGATTCTCCAGAACTTCAAGCACAACCCCAAAATCAACACCATCTTCATCTCCAAGGTTGGTGACACATCCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 90 bp | GGCAGATCAAAGGATGTGTCACCAACCTTGGAGATGAAGATGGTGTaGATTTTGGGGTTGTGCTTGAAGTTCTGGAGAATCTGCATACGT | + |
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Preference number: 6 (lower is better) Translates to: GRSKDVSPTLEMKMV*ILGLCLKFWRICIR Trigger: ACGTATGCAGATTCTCCAGAACTTCAAGCACAACCCCAAAATCAACACCATCTTCATCTCCAAGGTTGGTGACACATCCTTTGATCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CCA 72 bp | ACGTGGGCCCGTAGATATAAGGTTTGTTCAGCCGAATaGCATATTCCTTCAAGGCAAATACGTTGTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: TWARRYKVCSAE*HIPSRQIRCQQ Trigger: TTGCTGACAACGTATTTGCCTTGAAGGAATATGCCATTCGGCTGAACAAACCTTATATCTACGGGCCCACGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 72 bp | TTAAGTCAACAATTTTGTCATCTTCCCGGACAAGGGTaGCAGTCAAACCAAGCTTACAGTGCGCCTGCACAA | + |
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Preference number: 6 (lower is better) Translates to: LSQQFCHLPGQG*QSNQAYSAPAQ Trigger: TTGTGCAGGCGCACTGTAAGCTTGGTTTGACTGCAACCCTTGTCCGGGAAGATGACAAAATTGTTGACTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS TCA 72 bp | GATTCATGGTGTACAACAGGATCCGTTTCTTTGTTTTaGTTGCCACATACTCTCGGTAGAACTCGGGAGACA | + |
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Preference number: 6 (lower is better) Translates to: DSWCTTGSVSLF*LPHTLGRTRET Trigger: TGTCTCCCGAGTTCTACCGAGAGTATGTGGCAATCAAAACAAAGAAACGGATCCTGTTGTACACCATGAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 72 bp | AGCTTGGGCCCAATCAGGAAATTTAAGTCAACAATTTaGTCATCTTCCCGGACAAGGGTTGCAGTCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: SLGPIRKFKSTI*SSSRTRVAVKP Trigger: TGGTTTGACTGCAACCCTTGTCCGGGAAGATGACAAAATTGTTGACTTAAATTTCCTGATTGGGCCCAAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CAA 72 bp | GTGTCACCAACCTTGGAGATGAAGATGGTGTTGATTTaGGGGTTGTGCTTGAAGTTCTGGAGAATCTGCATA | + |
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Preference number: 6 (lower is better) Translates to: VSPTLEMKMVLI*GLCLKFWRICI Trigger: TATGCAGATTCTCCAGAACTTCAAGCACAACCCCAAAATCAACACCATCTTCATCTCCAAGGTTGGTGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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| CDS CCA 72 bp | TGTTCTGCAGCTCCATCCAGTTGGCTTCATAGAGCTTaGGCCCAATCAGGAAATTTAAGTCAACAATTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CSAAPSSWLHRA*AQSGNLSQQFC Trigger: ACAAAATTGTTGACTTAAATTTCCTGATTGGGCCCAAGCTCTATGAAGCCAACTGGATGGAGCTGCAGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025241.7 |
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