RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERC1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030172

Ensembl transcript IDs: ENSMUST00000032279.12, ENSMUST00000079582.5, ENSMUST00000183703.8, ENSMUST00000183880.8, ENSMUST00000183911.8, ENSMUST00000184320.8, ENSMUST00000184838.8, ENSMUST00000184864.8, ENSMUST00000185139.8, ENSMUST00000185143.2

Found 1139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGACGGCGGGTGCCCAACAGGCCTGTGGTGCGGCCTCATCCCTCTaGCTCCTTTCCCATGACTCTGGACTCTGCAGGCAGGAGGTGAGG +
Preference number: 1 (lower is better)
Translates to: VTAGAQQACGAASSL*LLSHDSGLCRQEVR
Trigger: CCTCACCTCCTGCCTGCAGAGTCCAGAGTCATGGGAAAGGAGCCAGAGGGATGAGGCCGCACCACAGGCCTGTTGGGCACCCGCCGTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: DTDGRTGTSSWQSLV*WRLRHLFLRFPLWL
Trigger: GAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTaGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTT +
Preference number: 1 (lower is better)
Translates to: TDGRTGTSSWQSLVW*RLRHLFLRFPLWLL
Trigger: AAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 90 bp CAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGG +
Preference number: 1 (lower is better)
Translates to: QSTMTDTDGRTGTSS*QSLVWWRLRHLFLR
Trigger: CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 90 bp AGGCCTGTCTGTGGTGATCCCTCACAGAACAGCTGGAGCAGCAGCTaGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTGGACTCTTC +
Preference number: 1 (lower is better)
Translates to: RPVCGDPSQNSWSSS*PVAVLGYSCGPGLF
Trigger: GAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCTCCAGCTGTTCTGTGAGGGATCACCACAGACAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CCA 90 bp GGGAGGCCAATGAGGAAGGCCTGGAGGAGGCCAATGAGGAAGGCCTaGGGGGAGGCCACCTTTACCTTAGGTGCGAAGGCTATGAGGCTT +
Preference number: 1 (lower is better)
Translates to: GRPMRKAWRRPMRKA*GEATFTLGAKAMRL
Trigger: AAGCCTCATAGCCTTCGCACCTAAGGTAAAGGTGGCCTCCCCCCAGGCCTTCCTCATTGGCCTCCTCCAGGCCTTCCTCATTGGCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CCA 90 bp GGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTaGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTT +
Preference number: 1 (lower is better)
Translates to: GQQQLGARCWEQRAL*VMLRRNQPGPPGQL
Trigger: AAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 90 bp GTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTaGTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGG +
Preference number: 1 (lower is better)
Translates to: VAAQTPVPQVPSLAP*SPSLSGAHQEDSSR
Trigger: CCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CCA 90 bp GTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCTaGAGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGG +
Preference number: 1 (lower is better)
Translates to: VHVRRPVCGDPSQNS*SSSWPVAVLGYSCG
Trigger: CCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCTCCAGCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CCA 90 bp TCAGGCCGGCAATTTGACTCTAGGAGCTGCACACATGTGCACAGCTaGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACC +
Preference number: 1 (lower is better)
Translates to: SGRQFDSRSCTHVHS*QQLQLLHTSHQAAT
Trigger: GGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCAGCTGTGCACATGTGTGCAGCTCCTAGAGTCAAATTGCCGGCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 90 bp GGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTaGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTGATGCTCAG +
Preference number: 1 (lower is better)
Translates to: GQWITYSSNPWSTAA*GKVLGAESTVGDAQ
Trigger: CTGAGCATCACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 90 bp CCCAAGCTGCCTGCTCACCATCTGCATTATAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTG +
Preference number: 1 (lower is better)
Translates to: PKLPAHHLHYKKLVE*VHGGLRGLGHGRGL
Trigger: CAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTTATAATGCAGATGGTGAGCAGGCAGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR GCA 90 bp GGTGCGGCCTCATCCCTCTGGCTCCTTTCCCATGACTCTGGACTCTaGAGGCAGGAGGTGAGGCAGACTCGAGAGTTGTTATCAATACTG +
Preference number: 1 (lower is better)
Translates to: GAASSLWLLSHDSGL*RQEVRQTRELLSIL
Trigger: CAGTATTGATAACAACTCTCGAGTCTGCCTCACCTCCTGCCTGCAGAGTCCAGAGTCATGGGAAAGGAGCCAGAGGGATGAGGCCGCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 90 bp CGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGTaGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTCCTGTTTCTGGA +
Preference number: 1 (lower is better)
Translates to: RAKASAPSSRSTESE*APDELSGFWLPVSG
Trigger: TCCAGAAACAGGAAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 90 bp CATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTaGGAGCAGAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCT +
Preference number: 1 (lower is better)
Translates to: HTLATPGQQQLGARC*EQRALWVMLRRNQP
Trigger: AGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 90 bp GGTGCGAAGGCTATGAGGCTTGACGATGGAATGAAGAGGCAGGGATaGTCTCAGCCAACCTGCAGTGAGCTCTCAGGGCCAGCTACCTTA +
Preference number: 1 (lower is better)
Translates to: GAKAMRLDDGMKRQG*SQPTCSELSGPATL
Trigger: TAAGGTAGCTGGCCCTGAGAGCTCACTGCAGGTTGGCTGAGATCATCCCTGCCTCTTCATTCCATCGTCAAGCCTCATAGCCTTCGCACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 90 bp CATCCCCGGCCTAGGTTTCTAGTCTGCACTGGGCAGCTGGGCCACTaGATGGCATGTGCCTCAGGTGGGACTAGATGCTTTAAAGAATGG +
Preference number: 1 (lower is better)
Translates to: HPRPRFLVCTGQLGH*MACASGGTRCFKEW
Trigger: CCATTCTTTAAAGCATCTAGTCCCACCTGAGGCACATGCCATTCAGTGGCCCAGCTGCCCAGTGCAGACTAGAAACCTAGGCCGGGGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR TCA 90 bp CACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCT +
Preference number: 1 (lower is better)
Translates to: HPPCQEHIRRTLPGH*PLVRGCQGSDRLSA
Trigger: AGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR GCA 90 bp CATGGGACCTTCCAGGCAGAGAGGTGGCTCACCCAAGCCCATAGATaGCATGAGGGTGGAGAACAAAGAATGCTGGTCTGCGAAGAAGGA +
Preference number: 1 (lower is better)
Translates to: HGTFQAERWLTQAHR*HEGGEQRMLVCEEG
Trigger: TCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGGCTTGGGTGAGCCACCTCTCTGCCTGGAAGGTCCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 90 bp GCTTTGACCCTTCTTCAAAGACCTGGAGGGAGGCCAATGAGTCTGTaGTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTG +
Preference number: 1 (lower is better)
Translates to: ALTLLQRPGGRPMSL*FSHIGGCGAKPVPV
Trigger: CACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 90 bp CGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCA +
Preference number: 1 (lower is better)
Translates to: RGCQGSDRLSAGEWC*QTPAARRCPLQLSP
Trigger: TGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR TCA 90 bp GACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTaGTCGGCTATCTGCTGGAGAATGGTGTTGGCAAACTCCTGCAGC +
Preference number: 1 (lower is better)
Translates to: DSSRALTTCSRMSGQ*SAICWRMVLANSCS
Trigger: GCTGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CCA 90 bp CTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTT +
Preference number: 1 (lower is better)
Translates to: LVRGCQGSDRLSAGE*CWQTPAARRCPLQL
Trigger: AAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CCA 90 bp GAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGAATAAAGGCTaGCAGGAATTGCAGGAGCCCCTCCGCATTGCTGAGTTGCTAAAC +
Preference number: 1 (lower is better)
Translates to: EEEVHSGLLKWENKG*QELQEPLRIAELLN
Trigger: GTTTAGCAACTCAGCAATGCGGAGGGGCTCCTGCAATTCCTGCCAGCCTTTATTCTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 90 bp CTAATAAACACCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTaGTCCCTCACAGAACAGCTGGAGCAGCAGCTGGCCAGTGGCAGT +
Preference number: 1 (lower is better)
Translates to: LINTKMGTCKEACLW*SLTEQLEQQLASGS
Trigger: ACTGCCACTGGCCAGCTGCTGCTCCAGCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGGTGTTTATTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 90 bp ATCTTTGTGATGTCATCATCAGGCCGGCAATTTGACTCTAGGAGCTaGACACATGTGCACAGCTGGCAGCAGCTGCAGCTGCTTCACACA +
Preference number: 1 (lower is better)
Translates to: IFVMSSSGRQFDSRS*THVHSWQQLQLLHT
Trigger: TGTGTGAAGCAGCTGCAGCTGCTGCCAGCTGTGCACATGTGTGCAGCTCCTAGAGTCAAATTGCCGGCCTGATGATGACATCACAAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 90 bp AGAATGCTGGTCTGCGAAGAAGGAAGGGAGAAGGTATGCGTTCACTaGCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATC +
Preference number: 1 (lower is better)
Translates to: RMLVCEEGREKVCVH*HDSTEHISQGFHTI
Trigger: GATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAACGCATACCTTCTCCCTTCCTTCTTCGCAGACCAGCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 90 bp GGACTTAGGCCTGTGGGTATCACATCCTACGGAGTGACATATCCTTaGTTTGACCCTTCTTCAAAGACCTGGAGGGAGGCCAATGAGTCT +
Preference number: 1 (lower is better)
Translates to: GLRPVGITSYGVTYP*FDPSSKTWREANES
Trigger: AGACTCATTGGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGCAAGGATATGTCACTCCGTAGGATGTGATACCCACAGGCCTAAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 90 bp CAAGCCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTGGTCTaGGAAGAAGGAAGGGAGAAGGTATGCGTTCACTGCCATGATTCA +
Preference number: 1 (lower is better)
Translates to: QAHRCHEGGEQRMLV*EEGREKVCVHCHDS
Trigger: TGAATCATGGCAGTGAACGCATACCTTCTCCCTTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGGCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 90 bp CTGGGACAGAGTCTACTAAGGCATGCAGAGCTGGGAGCCCCAGGTTaGCTTCTAGCCCTCTTTTCCTACTATCATCTTTATGATGTCACT +
Preference number: 1 (lower is better)
Translates to: LGQSLLRHAELGAPG*LLALFSYYHLYDVT
Trigger: AGTGACATCATAAAGATGATAGTAGGAAAAGAGGGCTAGAAGCCAACCTGGGGCTCCCAGCTCTGCATGCCTTAGTAGACTCTGTCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 90 bp GCACTTAGGCCTGTGGGTATCATACCCTACATAGCGACATATTCTTaGTTTGACCCTTCTTCAAAGACCTGGAGGGAGGCCAATGAGGAA +
Preference number: 1 (lower is better)
Translates to: ALRPVGIIPYIATYS*FDPSSKTWREANEE
Trigger: TTCCTCATTGGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGCAAGAATATGTCGCTATGTAGGGTATGATACCCACAGGCCTAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 90 bp CAGAAGAGGCAGGAGGAGAAATACCTACAACAGGGTCACAGCACTTaGCAAGCACATCGGGAAGAATCAGGAGACACTTGGTTACAATTT +
Preference number: 1 (lower is better)
Translates to: QKRQEEKYLQQGHST*QAHREESGDTWLQF
Trigger: AAATTGTAACCAAGTGTCTCCTGATTCTTCCCGATGTGCTTGGCAAGTGCTGTGACCCTGTTGTAGGTATTTCTCCTCCTGCCTCTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 90 bp TTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTaGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGGCAGTGGATCA +
Preference number: 1 (lower is better)
Translates to: LCQKKFLGRYKAVAL*LYLESKAEKVGSGS
Trigger: TGATCCACTGCCCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 90 bp GACACAAGAGCTGGCGAGATGACTCCCAAGGTAGAAGTGCTAGTATaGACACTTGATTATGGTGGCAGGACATGCACATGTACACATACA +
Preference number: 1 (lower is better)
Translates to: DTRAGEMTPKVEVLV*TLDYGGRTCTCTHT
Trigger: TGTATGTGTACATGTGCATGTCCTGCCACCATAATCAAGTGTTCATACTAGCACTTCTACCTTGGGAGTCATCTCGCCAGCTCTTGTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR TCA 90 bp TTGATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTaGGGCTTACCTTTAAGACACTGGCACCAAGTTCTGAACTTTTTG +
Preference number: 1 (lower is better)
Translates to: LINGLDPRLTVAKWK*GLPLRHWHQVLNFL
Trigger: CAAAAAGTTCAGAACTTGGTGCCAGTGTCTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR CCA 90 bp AAGCTTTTAAATGTTTGCACTGGCATCAACCAACTGCTTGATCAATaGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTT +
Preference number: 1 (lower is better)
Translates to: KLLNVCTGINQLLDQ*LGSQANSSKVEVRL
Trigger: AAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATCAAGCAGTTGGTTGATGCCAGTGCAAACATTTAAAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR GCA 90 bp GAGAAGAAATGCTGTTTACCAGACCATGACAAGCTTTTAAATGTTTaGACTGGCATCAACCAACTGCTTGATCAATGGCTTGGATCCCAG +
Preference number: 1 (lower is better)
Translates to: EKKCCLPDHDKLLNV*TGINQLLDQWLGSQ
Trigger: CTGGGATCCAAGCCATTGATCAAGCAGTTGGTTGATGCCAGTGCAAACATTTAAAAGCTTGTCATGGTCTGGTAAACAGCATTTCTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR TCA 90 bp GTTTACAATAATTACCAAGGCAAAGTTGAACAGAACACATCTTTGTaGTGTCATCATCAGGCCGGCAATTTGACTCTAGGAGCTGCACAC +
Preference number: 1 (lower is better)
Translates to: VYNNYQGKVEQNTSL*CHHQAGNLTLGAAH
Trigger: GTGTGCAGCTCCTAGAGTCAAATTGCCGGCCTGATGATGACATCACAAAGATGTGTTCTGTTCAACTTTGCCTTGGTAATTATTGTAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 90 bp GTATTCAAGCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATaGTGTTTACCAGACCATGACAAGCTTTTAAATGTTTGCACTGGC +
Preference number: 1 (lower is better)
Translates to: VFKLNTQERGLTEKK*CLPDHDKLLNVCTG
Trigger: GCCAGTGCAAACATTTAAAAGCTTGTCATGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGCTTGAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR CCA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCACCCTCTCTGGCTCCTTaGTCACCCTCCTTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSPSLAP*SPSLSG
Trigger: TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGG...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCACTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSLRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCGCCACCCACGGCACCTaGCCCACAGGCTCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: WQQLQLLHTSHQAATMAIATHGT*PTGSRS
Trigger: GCTCCTGGAGCCTGTGGGCCAGGTGCCGTGGGTGGC...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCCCCTCTCTGGCTCCTTaGTCACCCTCCTTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLPSLAP*SPSLSG
Trigger: TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGG...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp GACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCCTCTCTGGCTCCTTaGTCACCCTCCTTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: DWHIQLAESGVVAAQTPVPSLAP*SPSLSG
Trigger: TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGG...AACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCCCTCTCTGGCTCCTTaGTCACCCTCCTTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGPSLAP*SPSLSG
Trigger: TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGG...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCCCCTCTCTGGCTCCTTaGTCACCCTCCTTGTCAGGA +
Preference number: 2 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVPSLAP*SPSLSG
Trigger: TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGG...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTCTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: ESTVGDAQEESAWPSRTALRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCCTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVLRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: PVSGRAECSSQHSTADAKWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...CTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp CCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: PGAHDGKQEGSAGAERSIKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...AATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp TACCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTAAGGATGTCAGGGCAGTaGTCGGCTATCTGCTGGAGA +
Preference number: 2 (lower is better)
Translates to: YLGLMMVNRRAARAQRGVRMSGQ*SAICWR
Trigger: TCTCCAGCAGATAGCCGATCACTGCCCTGACATCCT...TACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp ACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGCTGGCTTCCTGTTTCTaGAAGGGCAGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: TPGQQQLGARCWEQRALWLASCF*KGRVQL
Trigger: GAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAG...CCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACTGGCTTCCTGTTTCTaGAAGGGCAGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSLASCF*KGRVQL
Trigger: GAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAAAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: VGDAQEESAWPSRTASEEKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAATTATAAGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 2 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSIIRSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCTTATAAT...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAAAGAGAGCACTGTGGGTaGTGCTCAGGAGGAATCAGC +
Preference number: 2 (lower is better)
Translates to: VGDAQEESAWPSRTASEEREHCG*CSGGIS
Trigger: GCTGATTCCTCCTGAGCATCACCCACAGTGCTCTCT...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp GTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: VTLLVRSTSGGLFQGIDHVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...GTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp GTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: VTLLVRSTSGGLFQGIDHTGTSS*QSLVWW
Trigger: CCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT...GTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCAAGGGCAGTTCTTCATaGAGACCAGGGAGACTTGAG +
Preference number: 2 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTKGSSS*RPGRLE
Trigger: CTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCGAGCTGAGTGGCTTCTaGCTTCCTGTTTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVELSGF*LPVSGR
Trigger: CCTTCCAGAAACAGGAAGCCAGAAGCCACTCAGCTC...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: SGFLFLEGQSAARSTPLLAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...CAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR CAA 90 bp ACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTaGGGAGCAGAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCC +
Preference number: 2 (lower is better)
Translates to: TYSSNPWSTAAWGKV*GAESTVGDAQEESA
Trigger: GGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp TGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGTCTCCAGAGCCACTTaGGCTGCTGGATCACTCCCT +
Preference number: 2 (lower is better)
Translates to: WREANESVLQSHRRVWCQVSRAT*AAGSLP
Trigger: AGGGAGTGATCCAGCAGCTCAAGTGGCTCTGGAGAC...TTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR TCA 90 bp TCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: SGFLFLEGQSAARSTPLLKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...CAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGT +
Preference number: 2 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVTLPGH*PLVRGC
Trigger: ACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGT...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCAACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGT +
Preference number: 2 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSTLPGH*PLVRGC
Trigger: ACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGT...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR GCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCCTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 2 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVLILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: KVGSGSHTLATPGQQQLGTGTSS*QSLVWW
Trigger: CCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT...CCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCTGGCTTCCTGTTTCTaGAAGGGCAGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHILASCF*KGRVQL
Trigger: GAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAG...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCGAGCTGAGTGGCTTCTaGCTTCCTGTTTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: LLASCFWKGRVQLAALHCELSGF*LPVSGR
Trigger: CCTTCCAGAAACAGGAAGCCAGAAGCCACTCAGCTC...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 2 (lower is better)
Translates to: GIDHLFEDVRAVIGYLLEKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...CTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR TCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCGAGACCAGGGAGACTTaGGCAGGCAACATTCAAAGC +
Preference number: 2 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHIETRET*AGNIQS
Trigger: GCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTC...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAGAGACCAGGGAGACTTaGGCAGGCAACATTCAAAGC +
Preference number: 2 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPETRET*AGNIQS
Trigger: GCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTC...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: VTLLVRSTSGGLFQGIDHKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...GTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR TCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR GCA 90 bp CCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTGGAAGGGAGAAGGTATaGGTTCACTGCCATGATTCA +
Preference number: 2 (lower is better)
Translates to: PWSTAAWGKVLGAESTVGGREKV*VHCHDS
Trigger: TGAATCATGGCAGTGAACGCATACCTTCTCCCTTCC...ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTCTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 2 (lower is better)
Translates to: SRSTESEWAPDELSGFWLLILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp TCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGCTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 2 (lower is better)
Translates to: SGFLFLEGQSAARSTPLLLILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...CAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGCTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRLRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp CCTCTCACCAGAAGACAGCAGTGTCAGGAGTCTGCTTCAGGGATGAAGAATGAGTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: PLTRRQQCQESASGMKNEWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...CTCATTCTTCATCCCTGAAGCAGACTCCTGACACTGCTGTCTTCTGGTGAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAATGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGACTTGGGGCAAGGTGTTaGGAGCAGAGAGCACTGTGG +
Preference number: 2 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGLGARC*EQRALW
Trigger: CCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAG...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTTACTCTAGCAACCCCTaGTCAACAGCAGCTTGGGGC +
Preference number: 2 (lower is better)
Translates to: KHLHERFMAEATQPSRGIYSSNP*STAAWG
Trigger: GCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTA...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAAGCAGGTACAAGGCTGTaGCTCTGTGGTTGTATCTTG +
Preference number: 2 (lower is better)
Translates to: VGDAQEESAWPSRTASEEAGTRL*LCGCIL
Trigger: CAAGATACAACCACAGAGCCACAGCCTTGTACCTGC...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACAGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: HQEDSSRALTTCSRMSGQAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...CTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CAA 90 bp CGTGACCTCCAACACCACTGGTGGTCTTGTTCCAGTCTGCTCTCCTaGTTCCAGTGCTCTTCTAAAGCCCACTGGCGAGGAAGAGGTACA +
Preference number: 2 (lower is better)
Translates to: RDLQHHWWSCSSLLS*FQCSSKAHWRGRGT
Trigger: TGTACCTCTTCCTCGCCAGTGGGCTTTAGAAGAGCACTGGAACAAGGAGAGCAGACTGGAACAAGACCACCAGTGGTGTTGGAGGTCACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGGCAGAAGGGGAGATaGAGGCTGAGAGGCCTTAGC +
Preference number: 2 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQGQKGR*RLRGLS
Trigger: GCTAAGGCCTCTCAGCCTGCATCTCCCCTTCTGCCC...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACCTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYLRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACACAATGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: SLSEAFPRMTLCTWMCTQWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CCTCTCACCAGAAGACAGCAGTGTCAGGAGTCTGCTTCAGGGATGAAGAATGAGACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: PLTRRQQCQESASGMKNETGTSS*QSLVWW
Trigger: CCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT...CTCATTCTTCATCCCTGAAGCAGACTCCTGACACTGCTGTCTTCTGGTGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: CHDSTEHISQGFHTIPIRTGTSS*QSLVWW
Trigger: CCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT...TCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAAGGGCAGTTCTTCATaGAGACCAGGGAGACTTGAG +
Preference number: 2 (lower is better)
Translates to: YSSNPWSTAAWGKVLGAEKGSSS*RPGRLE
Trigger: CTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT...CTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTGAGCTGAGTGGCTTCTaGCTTCCTGTTTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: KHLHERFMAEATQPSRGIELSGF*LPVSGR
Trigger: CCTTCCAGAAACAGGAAGCCAGAAGCCACTCAGCTC...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCCTACTCCTGTGGGCCTaGACTCTTCTAAGTTTTCTG +
Preference number: 2 (lower is better)
Translates to: WQQLQLLHTSHQAATMAILLLWA*TLLSFL
Trigger: CAGAAAACTTAGAAGAGTCCAGGCCCACAGGAGTAG...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: APSSRSTESEWAPDELSGSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR CAA 90 bp CCAGGCCCAAGCCCAGGTTACAATATAGCACTAGGCACACAAGGCTaGATCCAATGTGAGGGTGAGGGTGGTTCTGGGGTCACCAACTTT +
Preference number: 2 (lower is better)
Translates to: PGPSPGYNIALGTQG*IQCEGEGGSGVTNF
Trigger: AAAGTTGGTGACCCCAGAACCACCCTCACCCTCACATTGGATCAAGCCTTGTGTGCCTAGTGCTATATTGTAACCTGGGCTTGGGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CAA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTaGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGAAT +
Preference number: 2 (lower is better)
Translates to: LVRSTSGGLFQGIDH*FEDVRAVIGYLLEN
Trigger: ATTCTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAACTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: GSSSWRPGRLEQATFKAELRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTG +
Preference number: 2 (lower is better)
Translates to: SVVPKEVSRQVQGCGSVVWQSLV*WRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA...AACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGCTGGCTTCCTGTTTCTaGAAGGGCAGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQLASCF*KGRVQL
Trigger: GAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAG...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGCAGGAGGAATCAGCCTaGCCCTCCAGGACAGCTTCT +
Preference number: 2 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQQEESA*PSRTAS
Trigger: AGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTG...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CAA 90 bp CCACTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGA +
Preference number: 2 (lower is better)
Translates to: PLLMPRAVLHGDQGD*SRQHSKQKAEYDDR
Trigger: TCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGAGACCAGGGAGACTTaGGCAGGCAACATTCAAAGC +
Preference number: 2 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYETRET*AGNIQS
Trigger: GCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTC...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp CCTCTCACCAGAAGACAGCAGTGTCAGGAGTCTGCTTCAGGGATGAAGAATGAGGAGACCAGGGAGACTTaGGCAGGCAACATTCAAAGC +
Preference number: 2 (lower is better)
Translates to: PLTRRQQCQESASGMKNEETRET*AGNIQS
Trigger: GCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTC...CTCATTCTTCATCCCTGAAGCAGACTCCTGACACTGCTGTCTTCTGGTGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGAGACCAGGGAGACTTaGGCAGGCAACATTCAAAGC +
Preference number: 2 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKETRET*AGNIQS
Trigger: GCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTC...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp TGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAACCAAGGATGACACTGTaGACATGGATGTGCACACAA +
Preference number: 2 (lower is better)
Translates to: WREANESVLQSHRRVWCQPRMTL*TWMCTQ
Trigger: TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGG...TTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR GCA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGCTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 2 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFELILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp ACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACCTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: TVNILLLSTKSSAGETGNLRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...GTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AGAGCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: RAIRVTTVNILLLSTKSSTGTSS*QSLVWW
Trigger: CCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT...ACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGTGGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: GGVSPRRIKGSRSWQRAVNLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...GACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGTGCATTATAAGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: ESTRAKASAPSSRSTESECIIRS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCTTATAATGCA...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTGTGGAGAACAAAGAATaGTGGTCTGCGAAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: KHLHERFMAEATQPSRGIVENKE*WSAKKE
Trigger: TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCAC...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp CTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTGTTAATAATTAAGCACATGTCCTaGAGGGCTCCTGCAACCTCT +
Preference number: 2 (lower is better)
Translates to: LCFSHIGGCGAKPVPVLIIKHMS*RAPATS
Trigger: AGAGGTTGCAGGAGCCCTGCAGGACATGTGCTTAAT...TATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CCA 90 bp AGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTCAGGTTCCCTCTCTaGCTCCTTGGTCACCCTCCT +
Preference number: 2 (lower is better)
Translates to: RQTQLCQKKFLGRYKAVALRFPL*LLGHPP
Trigger: AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAG...AGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGAGCTGAGTGGCTTCTaGCTTCCTGTTTCTGGAAGG +
Preference number: 2 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQELSGF*LPVSGR
Trigger: CCTTCCAGAAACAGGAAGCCAGAAGCCACTCAGCTC...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp TCTTCAAAGACCTGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGCAGACAGTCATGGAATaGCATGTACAGTGCAATGGC +
Preference number: 2 (lower is better)
Translates to: SSKTWREANESVLQSHRRQTVME*HVQCNG
Trigger: GCCATTGCACTGTACATGTCATTCCATGACTGTCTG...CCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGNLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CAA 90 bp GCCTTTGCTATAGTGCAGAGATCAGACACAGTCTGCCTTACAAACTaGCCTTCTCAATTAAGCACATGTCCTGCAGGGCTCCTGCAACCT +
Preference number: 2 (lower is better)
Translates to: AFAIVQRSDTVCLTN*PSQLSTCPAGLLQP
Trigger: AGGTTGCAGGAGCCCTGCAGGACATGTGCTTAATTGAGAAGGCAAGTTTGTAAGGCAGACTGTGTCTGATCTCTGCACTATAGCAAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp TTTAGTAACTATTGGCTTACTGAATGGCAGTCAGTAGGATCCCAATGCCAGATAAGGGGAGATGCAGGCTaGGAGGCCTTAGCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: FSNYWLTEWQSVGSQCQIRGDAG*EALASH
Trigger: GTGAGAGGCTAAGGCCTCTCAGCCTGCATCTCCCCT...TATCTGGCATTGGGATCCTACTGACTGCCATTCAGTAAGCCAATAGTTACTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGAGTTCTAAGAGGGGCTaGATGATCGTTCTGAACAAA +
Preference number: 2 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRSSKRG*MIVLNK
Trigger: TTTGTTCAGAACGATCATCCAGCCCCTCTTAGAACT...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTACTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCA +
Preference number: 2 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLLSAGE*CWQTPA
Trigger: TGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAG...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000185139.8
3UTR CAA 90 bp TCAGAAGAGGCAGGAGGAGAAATACCTACAACAGGGTCACAGCACTaGCCAAGCACATCGGGAAGAATCAGGAGACACTTGGTTACAATT +
Preference number: 2 (lower is better)
Translates to: SEEAGGEIPTTGSQH*PSTSGRIRRHLVTI
Trigger: AATTGTAACCAAGTGTCTCCTGATTCTTCCCGATGTGCTTGGCAAGTGCTGTGACCCTGTTGTAGGTATTTCTCCTCCTGCCTCTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CCA 90 bp AAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGG +
Preference number: 2 (lower is better)
Translates to: KPHSDFFILNVRKYLLIPTGTSS*QSLVWW
Trigger: CCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT...TGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGAAATGACACTGTGCACATaGATGTGCACACAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: SRGILSSIPYKGTLHVREMTLCT*MCTQVG
Trigger: GCCTACTTGTGTGCACATCCATGTGCACAGTGTCAT...TTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GCTAAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCTGGGAGCCCCAGGTTaGCTTCTAGCCCTCTTTTCC +
Preference number: 2 (lower is better)
Translates to: AKPHSDFFILNVRKYLLILGAPG*LLALFS
Trigger: GGAAAAGAGGGCTAGAAGCCAACCTGGGGCTCCCAG...GATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 2 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFENLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CCA 90 bp AGAGCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTTGCATTATAAGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 2 (lower is better)
Translates to: RAIRVTTVNILLLSTKSSCIIRS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCTTATAATGCA...ACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGTATGGTGGCAGGACATaGACATGTACACATACACAC +
Preference number: 2 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKYGGRT*TCTHTH
Trigger: GTGTGTATGTGTACATGTGCATGTCCTGCCACCATA...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR CCA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAACTGGCTTCCTGTTTCTaGAAGGGCAGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: ERDLWATLNSFESVNWAELASCF*KGRVQL
Trigger: GAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAG...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GCTAAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCTGGCTTCCTGTTTCTaGAAGGGCAGAGTGCAGCTC +
Preference number: 2 (lower is better)
Translates to: AKPHSDFFILNVRKYLLILASCF*KGRVQL
Trigger: GAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAG...GATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAATTCCAGGCAGAGAGGTaGCTCACCCAAGCCCATAGA +
Preference number: 2 (lower is better)
Translates to: ERDLWATLNSFESVNWAEFQAER*LTQAHR
Trigger: TCTATGGGCTTGGGTGAGCCACCTCTCTGCCTGGAA...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAAGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 2 (lower is better)
Translates to: ERDLWATLNSFESVNWAEAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTAGACAGGCAACAGGCTaGGAGCTAAGCTGCATGAAG +
Preference number: 2 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCRQATG*ELSCMK
Trigger: CTTCATGCAGCTTAGCTCTCAGCCTGTTGCCTGTCT...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCGCTAGTATGAACACTTaGTTATGGTGGCAGGACATG +
Preference number: 2 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIASMNT*LWWQDM
Trigger: CATGTCCTGCCACCATAATCAAGTGTTCATACTAGC...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR TCA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 2 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp GCTAAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCGGATCTGCATCTGATTaGAGCATGGCCAAGCCCATG +
Preference number: 2 (lower is better)
Translates to: AKPHSDFFILNVRKYLLIGSASD*SMAKPM
Trigger: CATGGGCTTGGCCATGCTGCAATCAGATGCAGATCC...GATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp TCTTCAAAGACCTGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGGTGAGAGAGATTTGTaGGCAACATTAAATTCCTTT +
Preference number: 2 (lower is better)
Translates to: SSKTWREANESVLQSHRRGERDL*ATLNSF
Trigger: AAAGGAATTTAATGTTGCCCACAAATCTCTCTCACC...CCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR TCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCAGTAGCAAAGTGGAAGTaGGGCTTACCTTTAAGACAC +
Preference number: 2 (lower is better)
Translates to: AEYTGERIDREEMLFTRPVAKWK*GLPLRH
Trigger: GTGTCTTAAAGGTAAGCCTCACTTCCACTTTGCTAC...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR GCA 90 bp CACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGTCACTACCCAAGCCCATAGATaGCATGAGGGTGGAGAACAA +
Preference number: 2 (lower is better)
Translates to: HSDFFILNVRKYLLIPVTTQAHR*HEGGEQ
Trigger: TTGTTCTCCACCCTCATGGCATCTATGGGCTTGGGT...AGTGACTGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR TCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCAGTAGAAGTGCTAGTATaGACACTTGATTATGGTGGC +
Preference number: 2 (lower is better)
Translates to: AEYTGERIDREEMLFTRPVEVLV*TLDYGG
Trigger: GCCACCATAATCAAGTGTTCATACTAGCACTTCTAC...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR GCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCTTGACAGAGAAGAAATaGTGTTTACCAGACCATGAC +
Preference number: 2 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSILTEKK*CLPDHD
Trigger: GTCATGGTCTGGTAAACAGCATTTCTTCTCTGTCAA...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR CCA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGAGAACAAAGAATGCTaGTCTGCGAAGAAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCENKEC*SAKKEG
Trigger: CCCTTCCTTCTTCGCAGACCAGCATTCTTTGTTCTC...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CAA 90 bp GGGTCACAGCACTTGCCAAGCACATCGGGAAGAATCAGGAGACACTaGGTTACAATTTTGACACTAAAAAGTTTGGAAAGTTTCTGGTTA +
Preference number: 2 (lower is better)
Translates to: GSQHLPSTSGRIRRH*VTILTLKSLESFWL
Trigger: TAACCAGAAACTTTCCAAACTTTTTAGTGTCAAAATTGTAACCAAGTGTCTCCTGATTCTTCCCGATGTGCTTGGCAAGTGCTGTGACCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR GCA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGTGGAGAACAAAGAATaGTGGTCTGCGAAGAAGGAA +
Preference number: 2 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCVENKE*WSAKKE
Trigger: TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCAC...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp CACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGTCACTAGGAGGAGAAGCCTTTaGTATAGTGCAGAGATCAGA +
Preference number: 2 (lower is better)
Translates to: HSDFFILNVRKYLLIPVTRRRSL*YSAEIR
Trigger: TCTGATCTCTGCACTATAGCAAAGGCTTCTCCTCCT...AGTGACTGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR GCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCAAGCTTTTAAATGTTTaGACTGGCATCAACCAACTG +
Preference number: 2 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIKLLNV*TGINQL
Trigger: CAGTTGGTTGATGCCAGTGCAAACATTTAAAAGCTT...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR CCA 90 bp GGGAATGTGTGTGCATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAAGGCTGTGGCTCTGTaGTTGTATCTTGAGAGTAAA +
Preference number: 2 (lower is better)
Translates to: GNVCALRQTQLCQKKFLGKAVAL*LYLESK
Trigger: TTTACTCTCAAGATACAACCACAGAGCCACAGCCTT...GCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAATGCACACACATTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCAGTCATGATTTACCATaGATAAAAGTTACTGCTTCC +
Preference number: 2 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSISHDLP*IKVTAS
Trigger: GGAAGCAGTAACTTTTATCCATGGTAAATCATGACT...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR-3UTR GCA 90 bp CACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGTCACTATAGCGACATATTCTTaGTTTGACCCTTCTTCAAAG +
Preference number: 2 (lower is better)
Translates to: HSDFFILNVRKYLLIPVTIATYS*FDPSSK
Trigger: CTTTGAAGAAGGGTCAAAGCAAGAATATGTCGCTAT...AGTGACTGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CAA 90 bp TTGCCAAGCACATCGGGAAGAATCAGGAGACACTTGGTTACAATTTaGACACTAAAAAGTTTGGAAAGTTTCTGGTTAAAAAGAGTACAG +
Preference number: 2 (lower is better)
Translates to: LPSTSGRIRRHLVTI*TLKSLESFWLKRVQ
Trigger: CTGTACTCTTTTTAACCAGAAACTTTCCAAACTTTTTAGTGTCAAAATTGTAACCAAGTGTCTCCTGATTCTTCCCGATGTGCTTGGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp TGTGGCGGGAAAGGGGCTGGGCTGGTGTGCTCACTGTaGCATAGGGGTGGATCTCCTCGCCTCAGCCTGGCT +
Preference number: 3 (lower is better)
Translates to: CGGKGAGLVCSL*HRGGSPRLSLA
Trigger: AGCCAGGCTGAGGCGAGGAGATCCACCCCTATGCCACAGTGAGCACACCAGCCCAGCCCCTTTCCCGCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp GGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTaGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCT +
Preference number: 3 (lower is better)
Translates to: GRTGTSSWQSLV*WRLRHLFLRFP
Trigger: AGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp ATGACAGACACCGACGGCCGGACTGGCACATCCAGCTaGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTG +
Preference number: 3 (lower is better)
Translates to: MTDTDGRTGTSS*QSLVWWRLRHL
Trigger: CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTCTGTCAT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp CTGGTGGCCAGGCTGGGACCTCCAAAAGCACCTCCATaGGAGGTTCATGGCAGAGGCCACCCAACCCTCACG +
Preference number: 3 (lower is better)
Translates to: LVARLGPPKAPP*EVHGRGHPTLT
Trigger: CGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTTTTGGAGGTCCCAGCCTGGCCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp ACAGTCAGAATCTCTGAGACTGGCAGTGACGGCGGGTaGCCAACAGGCCTGTGGTGCGGCCTCATCCCTCTG +
Preference number: 3 (lower is better)
Translates to: TVRISETGSDGG*PTGLWCGLIPL
Trigger: CAGAGGGATGAGGCCGCACCACAGGCCTGTTGGGCACCCGCCGTCACTGCCAGTCTCAGAGATTCTGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTaGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTC +
Preference number: 3 (lower is better)
Translates to: RTGTSSWQSLVW*RLRHLFLRFPL
Trigger: GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp AAGGCAGAGTACGATGACAGACACCGACGGCCGGACTaGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCG +
Preference number: 3 (lower is better)
Translates to: KAEYDDRHRRPD*HIQLAESGVVA
Trigger: CGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp AGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCTaGAGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTAC +
Preference number: 3 (lower is better)
Translates to: RRPVCGDPSQNS*SSSWPVAVLGY
Trigger: GTAGCCTAGCACTGCCACTGGCCAGCTGCTGCTCCAGCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CCA 72 bp GGGTGTAATACTGGTGTGGCGGGAAAGGGGCTGGGCTaGTGTGCTCACTGTGGCATAGGGGTGGATCTCCTC +
Preference number: 3 (lower is better)
Translates to: GCNTGVAGKGLG*CAHCGIGVDLL
Trigger: GAGGAGATCCACCCCTATGCCACAGTGAGCACACCAGCCCAGCCCCTTTCCCGCCACACCAGTATTACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR TCA 72 bp TGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTaGTGCCAAGGGCAGTTCTTCATGGAGACCAGGGAG +
Preference number: 3 (lower is better)
Translates to: WKGRVQLAALHC*CQGQFFMETRE
Trigger: CTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp AAATCTAGGATCAGGAGCCAGAGAGAGCTAAGCTCTTaGGGGCCACCCACGGCACCTGGCCCACAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: KSRIRSQRELSS*GPPTAPGPQAP
Trigger: TGGAGCCTGTGGGCCAGGTGCCGTGGGTGGCCCTCAAGAGCTTAGCTCTCTCTGGCTCCTGATCCTAGATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 72 bp AGTGGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTaGAGCTCGCAGCACTCCACTGCTGATGCCAAGGGC +
Preference number: 3 (lower is better)
Translates to: SGFWLPVSGRAE*SSQHSTADAKG
Trigger: GCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp CTAGGAGCTGCACACATGTGCACAGCTGGCAGCAGCTaGAGCTGCTTCACACAAGCCATCAGGCTGCCACCA +
Preference number: 3 (lower is better)
Translates to: LGAAHMCTAGSS*SCFTQAIRLPP
Trigger: TGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCAGCTGTGCACATGTGTGCAGCTCCTAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp GCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGTaGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: ASAPSSRSTESE*APDELSGFWLP
Trigger: AGGAAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp CCTGACCTACCACATGGGACCTTCCAGGCAGAGAGGTaGCTCACCCAAGCCCATAGATGCCATGAGGGTGGA +
Preference number: 3 (lower is better)
Translates to: PDLPHGTFQAER*LTQAHRCHEGG
Trigger: TCCACCCTCATGGCATCTATGGGCTTGGGTGAGCCACCTCTCTGCCTGGAAGGTCCCATGTGGTAGGTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp TTAAGCACATGTCCTGCAGGGCTCCTGCAACCTCTCTaGAGGGACCTGATGGAGAAGGAAGGGGTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: LSTCPAGLLQPL*RDLMEKEGVEG
Trigger: CCCCTCCACCCCTTCCTTCTCCATCAGGTCCCTCCAGAGAGGTTGCAGGAGCCCTGCAGGACATGTGCTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CCA 72 bp GGACACGGCCAGCCACAGCGTGACCTCCAACACCACTaGTGGTCTTGTTCCAGTCTGCTCTCCTTGTTCCAG +
Preference number: 3 (lower is better)
Translates to: GHGQPQRDLQHH*WSCSSLLSLFQ
Trigger: CTGGAACAAGGAGAGCAGACTGGAACAAGACCACCAGTGGTGTTGGAGGTCACGCTGTGGCTGGCCGTGTCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp AGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTGGACTCTTCGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: SSSWPVAVLGYSCGPGLFGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...GAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCCCTTGGTCACCCTCCTaGTCAGGAGCACATCAGGAG +
Preference number: 3 (lower is better)
Translates to: LLASCFWKGRVQLAALHCPWSPS*SGAHQE
Trigger: CTCCTGATGTGCTCCTGACAAGGAGGGTGACCAAGG...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp GGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTTCCCTCTCTGGCTCCTaGGTCACCCTCCTTGTCAGG +
Preference number: 3 (lower is better)
Translates to: GESTRAKASAPSSRSTESSLSGS*VTLLVR
Trigger: CCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGA...AGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CTTCTAAAGCCCACTGGCGAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGGCTGGGAGCCCCAGGTaGGCTTCTAGCCCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: LLKPTGEEEVHSGLLKWEAGSPR*ASSPLF
Trigger: GAAAAGAGGGCTAGAAGCCAACCTGGGGCTCCCAGC...CTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGGCTTTAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCCTGAGCCCCAGATTCTaGTTCCCAGGCAGCTACCTA +
Preference number: 3 (lower is better)
Translates to: WQQLQLLHTSHQAATMAILSPRF*FPGSYL
Trigger: TAGGTAGCTGCCTGGGAACAAGAATCTGGGGCTCAG...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR TCA 72 bp TCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTaGGGAACAAAACTGCAGGCAGTGACAAGAGGGCCC +
Preference number: 3 (lower is better)
Translates to: SGGISLALQDSF*GTKLQAVTRGP
Trigger: GGGCCCTCTTGTCACTGCCTGCAGTTTTGTTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp GGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCC +
Preference number: 3 (lower is better)
Translates to: GCQGSDRLSAGE*CWQTPAARRCP
Trigger: GGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAGCCGATCACTGCCCTGACATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTGCTGGAGAATGGTGTaGGCAAACTCCTGCAGCTCG +
Preference number: 3 (lower is better)
Translates to: WLPVSGRAECSSQHSTADCWRMV*ANSCSS
Trigger: CGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCGACTCTTCCAGGGCATaGACCACTTGTTCGAGGATG +
Preference number: 3 (lower is better)
Translates to: LLASCFWKGRVQLAALHCDSSRA*TTCSRM
Trigger: CATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR TCA 72 bp GAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATaGCAGACACCGACGGCCGGACTGGCACATCCAGCT +
Preference number: 3 (lower is better)
Translates to: EQATFKAEGRVR*QTPTAGLAHPA
Trigger: AGCTGGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp GGGGATCTGCATCTGATTGCAGCATGGCCAAGCCCATaGGGTGTGCATGGCTGTGTTAAGCAGGCAGCTGAC +
Preference number: 3 (lower is better)
Translates to: GDLHLIAAWPSP*GVHGCVKQAAD
Trigger: GTCAGCTGCCTGCTTAACACAGCCATGCACACCTCATGGGCTTGGCCATGCTGCAATCAGATGCAGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp GCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTaGCACCATGGCTATCTACAGGGACTCAAGCTACAG +
Preference number: 3 (lower is better)
Translates to: AAAAAASHKPSG*HHGYLQGLKLQ
Trigger: CTGTAGCTTGAGTCCCTGTAGATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp GAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTaGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCG +
Preference number: 3 (lower is better)
Translates to: ESEWAPDELSGF*LPVSGRAECSS
Trigger: CGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp GAAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTaGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCA +
Preference number: 3 (lower is better)
Translates to: EGGQWITYSSNP*STAAWGKVLGA
Trigger: TGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp GCTGGGACCTCCAAAAGCACCTCCATGAGAGGTTCATaGCAGAGGCCACCCAACCCTCACGAGGAATTCTCT +
Preference number: 3 (lower is better)
Translates to: AGTSKSTSMRGS*QRPPNPHEEFS
Trigger: AGAGAATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTTTTGGAGGTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp CAGGGCAGTGATCGGCTATCTGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: QGSDRLSAGEWC*QTPAARRCPLQ
Trigger: TTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAGCCGATCACTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR-3UTR CAA 90 bp CTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTGTTAATATCCCTCTCTGGCTCCTaGGTCACCCTCCTTGTCAGG +
Preference number: 3 (lower is better)
Translates to: LCFSHIGGCGAKPVPVLISLSGS*VTLLVR
Trigger: CCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGA...TATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CAA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACTCCCTCTCTGGCTCCTaGGTCACCCTCCTTGTCAGG +
Preference number: 3 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYSLSGS*VTLLVR
Trigger: CCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGA...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTGCTGTGGCTCTGTGGTaGTATCTTGAGAGTAAAGCT +
Preference number: 3 (lower is better)
Translates to: PWSTAAWGKVLGAESTVGAVALW*YLESKA
Trigger: AGCTTTACTCTCAAGATACAACCACAGAGCCACAGC...ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGACTCTTCCAGGGCATaGACCACTTGTTCGAGGATG +
Preference number: 3 (lower is better)
Translates to: WLPVSGRAECSSQHSTADDSSRA*TTCSRM
Trigger: CATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR TCA 72 bp GTCCCTGGTCACCTCCTCCCTCCTTCTGTAACCCTCTaGGGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: VPGHLLPPSVTL*GESTRAKASAP
Trigger: TGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCCTCAGAGGGTTACAGAAGGAGGGAGGAGGTGACCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp ACCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTaGTCCCTCACAGAACAGCTGGAGCAGCAGCTGGCC +
Preference number: 3 (lower is better)
Translates to: TKMGTCKEACLW*SLTEQLEQQLA
Trigger: GGCCAGCTGCTGCTCCAGCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp GCTATGAGGCTTGACGATGGAATGAAGAGGCAGGGATaGTCTCAGCCAACCTGCAGTGAGCTCTCAGGGCCA +
Preference number: 3 (lower is better)
Translates to: AMRLDDGMKRQG*SQPTCSELSGP
Trigger: TGGCCCTGAGAGCTCACTGCAGGTTGGCTGAGATCATCCCTGCCTCTTCATTCCATCGTCAAGCCTCATAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp CCTAGGTTTCTAGTCTGCACTGGGCAGCTGGGCCACTaGATGGCATGTGCCTCAGGTGGGACTAGATGCTTT +
Preference number: 3 (lower is better)
Translates to: PRFLVCTGQLGH*MACASGGTRCF
Trigger: AAAGCATCTAGTCCCACCTGAGGCACATGCCATTCAGTGGCCCAGCTGCCCAGTGCAGACTAGAAACCTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR TCA 72 bp TGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGTCAGGGCAGTGATCGG +
Preference number: 3 (lower is better)
Translates to: CQEHIRRTLPGH*PLVRGCQGSDR
Trigger: CCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR GCA 72 bp TTCCAGGCAGAGAGGTGGCTCACCCAAGCCCATAGATaGCATGAGGGTGGAGAACAAAGAATGCTGGTCTGC +
Preference number: 3 (lower is better)
Translates to: FQAERWLTQAHR*HEGGEQRMLVC
Trigger: GCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGGCTTGGGTGAGCCACCTCTCTGCCTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp ATGTCATCATCAGGCCGGCAATTTGACTCTAGGAGCTaGACACATGTGCACAGCTGGCAGCAGCTGCAGCTG +
Preference number: 3 (lower is better)
Translates to: MSSSGRQFDSRS*THVHSWQQLQL
Trigger: CAGCTGCAGCTGCTGCCAGCTGTGCACATGTGTGCAGCTCCTAGAGTCAAATTGCCGGCCTGATGATGACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTaGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGT +
Preference number: 3 (lower is better)
Translates to: ITYSSNPWSTAA*GKVLGAESTVG
Trigger: ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp CACTGTGGCATAGGGGTGGATCTCCTCGCCTCAGCCTaGCTCATTTCCTTCCCTAACTCTGACATCTCTGGA +
Preference number: 3 (lower is better)
Translates to: HCGIGVDLLASA*LISFPNSDISG
Trigger: TCCAGAGATGTCAGAGTTAGGGAAGGAAATGAGCCAGGCTGAGGCGAGGAGATCCACCCCTATGCCACAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp TGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATaGCTATCTACAGGGACTCAAGCTACAGGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: CSCFTQAIRLPP*LSTGTQATGSQ
Trigger: CTGGCTTCCTGTAGCTTGAGTCCCTGTAGATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CAA 90 bp TCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACACAATCCCTCTCTGGCTCCTaGGTCACCCTCCTTGTCAGG +
Preference number: 3 (lower is better)
Translates to: SLSEAFPRMTLCTWMCTQSLSGS*VTLLVR
Trigger: CCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGA...TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCATCCCTCTCTGGCTCCTaGGTCACCCTCCTTGTCAGG +
Preference number: 3 (lower is better)
Translates to: KGSSSWRPGRLEQATFKASLSGS*VTLLVR
Trigger: CCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGA...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGTATTCGTTCTTCTCTTaGTCCCTGGTCACCTCCTCC +
Preference number: 3 (lower is better)
Translates to: YSSNPWSTAAWGKVLGAEYSFFS*SLVTSS
Trigger: GGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATA...CTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTATTCGTTCTTCTCTTaGTCCCTGGTCACCTCCTCC +
Preference number: 3 (lower is better)
Translates to: WLPVSGRAECSSQHSTADYSFFS*SLVTSS
Trigger: GGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAAGCTGTGGCTCTGTGGTaGTATCTTGAGAGTAAAGCT +
Preference number: 3 (lower is better)
Translates to: VGDAQEESAWPSRTASEEAVALW*YLESKA
Trigger: AGCTTTACTCTCAAGATACAACCACAGAGCCACAGC...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTGTTAATAAGTCTCCAGAGCCACTaGAGCTGCTGGATCACTCCC +
Preference number: 3 (lower is better)
Translates to: LCFSHIGGCGAKPVPVLISLQSH*SCWITP
Trigger: GGGAGTGATCCAGCAGCTCAAGTGGCTCTGGAGACT...TATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR TCA 72 bp CAACTAAAAGCAGTGCAGGTGAGACAGGCAACAGGCTaGGAGCTAAGCTGCATGAAGCTGGCCTGTACCTGG +
Preference number: 3 (lower is better)
Translates to: QLKAVQVRQATG*ELSCMKLACTW
Trigger: CCAGGTACAGGCCAGCTTCATGCAGCTTAGCTCTCAGCCTGTTGCCTGTCTCACCTGCACTGCTTTTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp ACAGCAGTGTCAGGAGTCTGCTTCAGGGATGAAGAATaGGACATGAGCTGCACTCTCTTAGGGCCCGACTCC +
Preference number: 3 (lower is better)
Translates to: TAVSGVCFRDEE*DMSCTLLGPDS
Trigger: GGAGTCGGGCCCTAAGAGAGTGCAGCTCATGTCTCATTCTTCATCCCTGAAGCAGACTCCTGACACTGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp CCTGCTCACCATCTGCATTATAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGGGGTCTCGGTCATGGC +
Preference number: 3 (lower is better)
Translates to: PAHHLHYKKLVE*VHGGLRGLGHG
Trigger: GCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTTATAATGCAGATGGTGAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR GCA 72 bp ATGTCACTTGGGGTAGACACTGCTGACACAGGGGTCTaGTGGCACTTAGGCCTGTGGGTATCATACCCTACA +
Preference number: 3 (lower is better)
Translates to: MSLGVDTADTGV*WHLGLWVSYPT
Trigger: TGTAGGGTATGATACCCACAGGCCTAAGTGCCAGCAGACCCCTGTGTCAGCAGTGTCTACCCCAAGTGACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 72 bp CTTCTTCAAAGACCTGGAGGGAGGCCAATGAGTCTGTaGTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCA +
Preference number: 3 (lower is better)
Translates to: LLQRPGGRPMSL*FSHIGGCGAKP
Trigger: TGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 72 bp TCGGCTATCTGCTGGAGAATGGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAAC +
Preference number: 3 (lower is better)
Translates to: SAICWRMVLANS*SSALSPSTFSN
Trigger: GTTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAGCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CCA 72 bp CTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTaGACTCTTCTAAGTTTTCTGATTTCCACTGTAGCC +
Preference number: 3 (lower is better)
Translates to: LASGSARLLLWA*TLLSFLISTVA
Trigger: GGCTACAGTGGAAATCAGAAAACTTAGAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGTGCTGGAGAATGGTGTaGGCAAACTCCTGCAGCTCG +
Preference number: 3 (lower is better)
Translates to: LSRQHSKQKAEYDDRHRRCWRMV*ANSCSS
Trigger: CGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCA...CCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTACCTTGGTCACCCTCCTaGTCAGGAGCACATCAGGAG +
Preference number: 3 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLPWSPS*SGAHQE
Trigger: CTCCTGATGTGCTCCTGACAAGGAGGGTGACCAAGG...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000185139.8
3UTR TCA 72 bp TGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTaGGCAGGCAACATTCAAAGCAGAAGGCAGAGTACG +
Preference number: 3 (lower is better)
Translates to: CQGQFFMETRET*AGNIQSRRQST
Trigger: CGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR TCA 72 bp AGTCTCCAGAGCCACTTGAGCTGCTGGATCACTCCCTaGGGAGGAGAAGCCTTTGCTATAGTGCAGAGATCA +
Preference number: 3 (lower is better)
Translates to: SLQSHLSCWITP*GGEAFAIVQRS
Trigger: TGATCTCTGCACTATAGCAAAGGCTTCTCCTCCTCAGGGAGTGATCCAGCAGCTCAAGTGGCTCTGGAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp AATGAAGAGGCAGGGATGATCTCAGCCAACCTGCAGTaGGCTCTCAGGGCCAGCTACCTTAAGGATCATGTG +
Preference number: 3 (lower is better)
Translates to: NEEAGMISANLQ*ALRASYLKDHV
Trigger: CACATGATCCTTAAGGTAGCTGGCCCTGAGAGCTCACTGCAGGTTGGCTGAGATCATCCCTGCCTCTTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp AGGCTGGCAGGAATTGCAGGAGCCCCTCCGCATTGCTaGGTTGCTAAACCCCACTCTGACTTCTTCATCTTA +
Preference number: 3 (lower is better)
Translates to: RLAGIAGAPPHC*VAKPHSDFFIL
Trigger: TAAGATGAAGAAGTCAGAGTGGGGTTTAGCAACTCAGCAATGCGGAGGGGCTCCTGCAATTCCTGCCAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp AGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTaGTCGGCTATCTGCTGGAGAATGGTGTTGGCAAAC +
Preference number: 3 (lower is better)
Translates to: RALTTCSRMSGQ*SAICWRMVLAN
Trigger: GTTTGCCAACACCATTCTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR GCA 72 bp ATTCCTTTGAGAGTGTTAACTGGGCAGAAGGGGAGATaGAGGCTGAGAGGCCTTAGCCTCTCACCAGAAGAC +
Preference number: 3 (lower is better)
Translates to: IPLRVLTGQKGR*RLRGLSLSPED
Trigger: GTCTTCTGGTGAGAGGCTAAGGCCTCTCAGCCTGCATCTCCCCTTCTGCCCAGTTAACACTCTCAAAGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp GAGCTGCTGGATCACTCCCTGAGGAGGAGAAGCCTTTaGTATAGTGCAGAGATCAGACACAGTCTGCCTTAC +
Preference number: 3 (lower is better)
Translates to: ELLDHSLRRRSL*YSAEIRHSLPY
Trigger: GTAAGGCAGACTGTGTCTGATCTCTGCACTATAGCAAAGGCTTCTCCTCCTCAGGGAGTGATCCAGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 72 bp TGGTGGTCTTGTTCCAGTCTGCTCTCCTTGTTCCAGTaGTCTTCTAAAGCCCACTGGCGAGGAAGAGGTACA +
Preference number: 3 (lower is better)
Translates to: WWSCSSLLSLFQ*SSKAHWRGRGT
Trigger: TGTACCTCTTCCTCGCCAGTGGGCTTTAGAAGAGCACTGGAACAAGGAGAGCAGACTGGAACAAGACCACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 72 bp GTGACCTCCAACACCACTGGTGGTCTTGTTCCAGTCTaGTCTCCTTGTTCCAGTGCTCTTCTAAAGCCCACT +
Preference number: 3 (lower is better)
Translates to: VTSNTTGGLVPV*SPCSSALLKPT
Trigger: AGTGGGCTTTAGAAGAGCACTGGAACAAGGAGAGCAGACTGGAACAAGACCACCAGTGGTGTTGGAGGTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 72 bp AATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTaGCAAGCCAGTCCCAGTGTTAATAGCAGAGGGCAG +
Preference number: 3 (lower is better)
Translates to: NESVLQSHRRVW*QASPSVNSRGQ
Trigger: CTGCCCTCTGCTATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR-3UTR CAA 90 bp GGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: GVVPFNFLQLVLKLLLSHGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...ATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGGGACAACGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
3UTR TCA 72 bp TATCATCTTTATGATGTCACTTGGGGTAGACACTGCTaGCACAGGGGTCTGCTGGCACTTAGGCCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: YHLYDVTWGRHC*HRGLLALRPVG
Trigger: ACCCACAGGCCTAAGTGCCAGCAGACCCCTGTGTCAGCAGTGTCTACCCCAAGTGACATCATAAAGATGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 72 bp GTCTGCGAAGAAGGAAGGGAGAAGGTATGCGTTCACTaGCATGATTCAACTGAGCACATCTCACAGGGCTTC +
Preference number: 3 (lower is better)
Translates to: VCEEGREKVCVH*HDSTEHISQGF
Trigger: GAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAACGCATACCTTCTCCCTTCCTTCTTCGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp CAGGAGGAGAAATACCTACAACAGGGTCACAGCACTTaGCAAGCACATCGGGAAGAATCAGGAGACACTTGG +
Preference number: 3 (lower is better)
Translates to: QEEKYLQQGHST*QAHREESGDTW
Trigger: CCAAGTGTCTCCTGATTCTTCCCGATGTGCTTGGCAAGTGCTGTGACCCTGTTGTAGGTATTTCTCCTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CCA 72 bp CCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTaGTCTGCGAAGAAGGAAGGGAGAAGGTATGCGTTC +
Preference number: 3 (lower is better)
Translates to: PIDAMRVENKEC*SAKKEGRRYAF
Trigger: GAACGCATACCTTCTCCCTTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp TCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: SVVPKEVSRQVQGCGSVVGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...AACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCGCTGTGGCTCTGTGGTaGTATCTTGAGAGTAAAGCT +
Preference number: 3 (lower is better)
Translates to: PKWVHVRRPVCGDPSQNSAVALW*YLESKA
Trigger: AGCTTTACTCTCAAGATACAACCACAGAGCCACAGC...GCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR GCA 72 bp CCTGTGGGTATCATACCCTACATAGCGACATATTCTTaGTTTGACCCTTCTTCAAAGACCTGGAGGGAGGCC +
Preference number: 3 (lower is better)
Translates to: PVGIIPYIATYS*FDPSSKTWREA
Trigger: GGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGCAAGAATATGTCGCTATGTAGGGTATGATACCCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp AACATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAG +
Preference number: 3 (lower is better)
Translates to: NMFQGSNTDSKDPDLPHGGDQGD*SRQHSK
Trigger: CTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCC...CCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCCTCTGTGGTTGTATCTaGAGAGTAAAGCTGAGAAGG +
Preference number: 3 (lower is better)
Translates to: PKWVHVRRPVCGDPSQNSLCGCI*RVKLRR
Trigger: CCTTCTCAGCTTTACTCTCAAGATACAACCACAGAG...GCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp AAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGCTGGGAGCCCCAGGTaGGCTTCTAGCCCTCTTTTC +
Preference number: 3 (lower is better)
Translates to: KPHSDFFILNVRKYLLIPAGSPR*ASSPLF
Trigger: GAAAAGAGGGCTAGAAGCCAACCTGGGGCTCCCAGC...TGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp TGGGACTTAGGCCTGTGGGTATCACATCCTACGGAGTaGCATATCCTTGCTTTGACCCTTCTTCAAAGACCT +
Preference number: 3 (lower is better)
Translates to: WDLGLWVSHPTE*HILALTLLQRP
Trigger: AGGTCTTTGAAGAAGGGTCAAAGCAAGGATATGTCACTCCGTAGGATGTGATACCCACAGGCCTAAGTCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 72 bp CCATCCCTATCCGAGGCTTTTCCAAGGATGACACTGTaGACATGGATGTGCACACAAGTAGGCATTTCATAC +
Preference number: 3 (lower is better)
Translates to: PSLSEAFPRMTL*TWMCTQVGISY
Trigger: GTATGAAATGCCTACTTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR GCA 72 bp AGAATGCTGGTCTGCGAAGAAGGAAGGGAGAAGGTATaGGTTCACTGCCATGATTCAACTGAGCACATCTCA +
Preference number: 3 (lower is better)
Translates to: RMLVCEEGREKV*VHCHDSTEHIS
Trigger: TGAGATGTGCTCAGTTGAATCATGGCAGTGAACGCATACCTTCTCCCTTCCTTCTTCGCAGACCAGCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp AAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTaGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGGC +
Preference number: 3 (lower is better)
Translates to: KKFLGRYKAVAL*LYLESKAEKVG
Trigger: GCCCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR CCA 72 bp GTGACATATCCTTGCTTTGACCCTTCTTCAAAGACCTaGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACAT +
Preference number: 3 (lower is better)
Translates to: VTYPCFDPSSKT*REANESVLQSH
Trigger: ATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGAAGGGTCAAAGCAAGGATATGTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 72 bp GGAGGGAATGTGTGTGCATTAAGACAAACTCAGTTGTaGCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTG +
Preference number: 3 (lower is better)
Translates to: GGNVCALRQTQL*QKKFLGRYKAV
Trigger: CACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAATGCACACACATTCCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp AAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCATATTCGTTCTTCTCTTaGTCCCTGGTCACCTCCTCC +
Preference number: 3 (lower is better)
Translates to: KPHSDFFILNVRKYLLIPYSFFS*SLVTSS
Trigger: GGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATA...TGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp GATGACTCCCAAGGTAGAAGTGCTAGTATGAACACTTaGTTATGGTGGCAGGACATGCACATGTACACATAC +
Preference number: 3 (lower is better)
Translates to: DDSQGRSASMNT*LWWQDMHMYTY
Trigger: GTATGTGTACATGTGCATGTCCTGCCACCATAATCAAGTGTTCATACTAGCACTTCTACCTTGGGAGTCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR CCA 72 bp GGCAGTTACGCATTTAGTAACTATTGGCTTACTGAATaGCAGTCAGTAGGATCCCAATGCCAGATACCCTAT +
Preference number: 3 (lower is better)
Translates to: GSYAFSNYWLTE*QSVGSQCQIPY
Trigger: ATAGGGTATCTGGCATTGGGATCCTACTGACTGCCATTCAGTAAGCCAATAGTTACTAAATGCGTAACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CCA 72 bp GTACAGTGCAATGGCAGTTACGCATTTAGTAACTATTaGCTTACTGAATGGCAGTCAGTAGGATCCCAATGC +
Preference number: 3 (lower is better)
Translates to: VQCNGSYAFSNY*LTEWQSVGSQC
Trigger: GCATTGGGATCCTACTGACTGCCATTCAGTAAGCCAATAGTTACTAAATGCGTAACTGCCATTGCACTGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR-3UTR CAA 90 bp CACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGTCACTCTCTGTGGTTGTATCTaGAGAGTAAAGCTGAGAAGG +
Preference number: 3 (lower is better)
Translates to: HSDFFILNVRKYLLIPVTLCGCI*RVKLRR
Trigger: CCTTCTCAGCTTTACTCTCAAGATACAACCACAGAG...AGTGACTGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR TCA 72 bp AATTACCAAGGCAAAGTTGAACAGAACACATCTTTGTaGTGTCATCATCAGGCCGGCAATTTGACTCTAGGA +
Preference number: 3 (lower is better)
Translates to: NYQGKVEQNTSL*CHHQAGNLTLG
Trigger: TCCTAGAGTCAAATTGCCGGCCTGATGATGACATCACAAAGATGTGTTCTGTTCAACTTTGCCTTGGTAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR GCA 72 bp TGCTGTTTACCAGACCATGACAAGCTTTTAAATGTTTaGACTGGCATCAACCAACTGCTTGATCAATGGCTT +
Preference number: 3 (lower is better)
Translates to: CCLPDHDKLLNV*TGINQLLDQWL
Trigger: AAGCCATTGATCAAGCAGTTGGTTGATGCCAGTGCAAACATTTAAAAGCTTGTCATGGTCTGGTAAACAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
3UTR CCA 72 bp AGGTGTCCAATATACAACTTTAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGCTGGATGATCGTTCTG +
Preference number: 3 (lower is better)
Translates to: RCPIYNFNLLLF*SSSKRGWMIVL
Trigger: CAGAACGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTTAAAGTTGTATATTGGACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR GCA 72 bp CTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATaGTGTTTACCAGACCATGACAAGCTTTTAAATGTT +
Preference number: 3 (lower is better)
Translates to: LNTQERGLTEKK*CLPDHDKLLNV
Trigger: AACATTTAAAAGCTTGTCATGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCTCCACCTGCAGTTGCTaGGAGCTGTCGCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLSTCSC*ELSLRL
Trigger: CAGTCTCAGCGACAGCTCTCAGCAACTGCAGGTGGA...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
CDS-3UTR TCA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCATTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGAAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRRLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTTGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCTGGCCAATCTCAGACTaGAGACCAGCCGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLWPISD*RPAALF
Trigger: AAAGAGAGCGGCTGGTCTTCAGTCTGAGATTGGCCA...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGAAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRSNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGTCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRSPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: HRRPDWHIQLAESGVVAAGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...AGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSTLPGH*PLVRGC
Trigger: ACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGT...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCCTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLLYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: HRRPDWHIQLAESGVVAALYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...AGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGTGGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GGVSPRRIKGSRSWQRAVDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...GACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: HRRPDWHIQLAESGVVAAMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...AGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTDRPGL*LLGSTF
Trigger: GAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATC...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTSACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCTGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGATCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTGGACTCTTCAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSSWPVAVLGYSCGPGLFKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...GAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGATCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRSPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLSSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCACCTCCTCCCGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AGAERSIRSSLCPWSPPPAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...GGGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCTCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCCTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRDRPGL*LLGSTF
Trigger: GAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATC...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTTCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCTCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGGGCTGGATGATCTaGTCTGGGGAGGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLRGWMI*SGEGLW
Trigger: CCATAAACCCTCCCCAGACCAGATCATCCAGCCCCT...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: ESTVGDAQEESAWPSRTARPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: PGAHDGKQEGSAGAERSISNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...AATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFSNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALSNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGSNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGTCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: ALWVMLRRNQPGPPGQLLSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...CAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCTCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: HRRPDWHIQLAESGVVAALLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...AGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: GVSPRRIKGSRSWQRAVRFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...CCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCCTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLDRPGL*LLGSTF
Trigger: GAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATC...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMRLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WLPVSGRAECSSQHSTADWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCATGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCTGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: WSPSLSGAHQEDSSRALTWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...GGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGACCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGATCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRSLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: WQSLVWWRLRHLFLRFPLASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAATCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: VGDAQEESAWPSRTASEESARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCAGGGGCTGGATGATCTaGTCTGGGGAGGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFRGWMI*SGEGLW
Trigger: CCATAAACCCTCCCCAGACCAGATCATCCAGCCCCT...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp CCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PVSGRAECSSQHSTADAKKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...CTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCATTATAAGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLIIRSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCTTATAAT...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGSPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVSGRAECSSQHSTADAKRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...CTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAAGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: LLMPRAVLHGDQGDLSRQAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...TTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCACCTCCTCCCAGGATGTCAGGGCAGTaGTCGGCTATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: AGAERSIRSSLCPWSPPPRMSGQ*SAICWR
Trigger: TCTCCAGCAGATAGCCGATCACTGCCCTGACATCCT...GGGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VSPRRIKGSRSWQRAVRCRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAATCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: VGDAQEESAWPSRTASEESLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTTCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: GFWLPVSGRAECSSQHSTSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...AGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGTCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: GIDHLFEDVRAVIGYLLEDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...CTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: AHDGKQEGSAGAERSIRSDRPGL*LLGSTF
Trigger: GAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATC...AGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSSACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAAGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VGDAQEESAWPSRTASEEASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGSQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCTCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTSQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCAGGGGCTGGATGATCTaGTCTGGGGAGGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: WQQLQLLHTSHQAATMAIRGWMI*SGEGLW
Trigger: CCATAAACCCTCCCCAGACCAGATCATCCAGCCCCT...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGAGGGGCTGGATGATCTaGTCTGGGGAGGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRRGWMI*SGEGLW
Trigger: CCATAAACCCTCCCCAGACCAGATCATCCAGCCCCT...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCCACCTTCCCTACTaGTCGAGCACTTCCATACAT +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGFHLPY*SSTSIH
Trigger: ATGTATGGAAGTGCTCGATCAGTAGGGAAGGTGGAA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAAGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: LLMPRAVLHGDQGDLSRQGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...TTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: KHLHERFMAEATQPSRGIGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGTTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TPGQQQLGARCWEQRALWFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...CCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTTCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGSPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTTCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPSPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTTCAGCTCCTCCCCTTaGGCATCTTTCGAACTTAGC +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPFSSSP*ASFELS
Trigger: GCTAAGTTCGAAAGATGCTCAAGGGGAGGAGCTGAA...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAATGGCCAATCTCAGACTaGAGACCAGCCGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: VGDAQEESAWPSRTASEEWPISD*RPAALF
Trigger: AAAGAGAGCGGCTGGTCTTCAGTCTGAGATTGGCCA...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCTCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: WQQLQLLHTSHQAATMAISSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR TCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCTCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSSSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: WLPVSGRAECSSQHSTADFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: ESTVGDAQEESAWPSRTAGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTCCACCTGCAGTTGCTaGGAGCTGTCGCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: HQEDSSRALTTCSRMSGQSTCSC*ELSLRL
Trigger: CAGTCTCAGCGACAGCTCTCAGCAACTGCAGGTGGA...CTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
CDS-3UTR GCA 90 bp GCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: AHDGKQEGSAGAERSIRSSNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...AGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGTGGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGVSPRRIKGSRSWQRAVAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...GACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGCTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALLYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGTGGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: GGVSPRRIKGSRSWQRAVMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...GACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSLILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPLILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVRLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATTGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSSLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCTCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTSLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp TACCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTACACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: YLGLMMVNRRAARAQRGVHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...TACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: DWHIQLAESGVVAAQTPVHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...AACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGTGGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: GGVSPRRIKGSRSWQRAVHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...GACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: VSPRRIKGSRSWQRAVRCSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTGGACTCTTCCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: SSSWPVAVLGYSCGPGLFRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...GAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGTCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ALWVMLRRNQPGPPGQLLSQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...CAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLSSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTATTATAAGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPIIRSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCTTATAAT...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTGCATTATAAGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGCIIRS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCTTATAATGCA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTGCATTATAAGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSCIIRS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCTTATAATGCA...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCTTCCACCTTCCCTACTaGTCGAGCACTTCCATACAT +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFFHLPY*SSTSIH
Trigger: ATGTATGGAAGTGCTCGATCAGTAGGGAAGGTGGAA...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTCTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: PGAHDGKQEGSAGAERSIVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...AATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTTCAGCTCCTCCCCTTaGGCATCTTTCGAACTTAGC +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCFSSSP*ASFELS
Trigger: GCTAAGTTCGAAAGATGCTCAAGGGGAGGAGCTGAA...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRLRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCCTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTLRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGATCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGSSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: WSPSLSGAHQEDSSRALTVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...GGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAAGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LSTSHRASTPSLSEAFPRSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...CCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: WREANESVLQSHRRVWCQSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...TTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR TCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGAAAGGGTTTTCCCACTaGCACCTCCAACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALKGFSH*HLQHCF
Trigger: GAAACAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACAAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTSNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTCCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: GFWLPVSGRAECSSQHSTPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...AGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHINSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGCTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SGFLFLEGQSAARSTPLLLYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...CAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: HQEDSSRALTTCSRMSGQRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...CTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRSSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTGGACTCTTCTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: SSSWPVAVLGYSCGPGLFFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...GAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: LHGDQGDLSRQHSKQKAEDCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...CTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAATTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: WREANESVLQSHRRVWCQFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...TTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR GCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGCTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTC +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRDRPGL*LLGSTF
Trigger: GAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATC...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: ESTVGDAQEESAWPSRTAAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGTGGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: GGVSPRRIKGSRSWQRAVAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...GACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCATCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QTPVPQVPSLAPWSPSLSSACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...TGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCACCTCCTCCCGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AGAERSIRSSLCPWSPPPEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...GGGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGRLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: GFWLPVSGRAECSSQHSTHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...AGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: KVGSGSHTLATPGQQQLGASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...CCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGTCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMSQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGGCAGTTCTTCATGGTCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: AECSSQHSTADAKGSSSWSQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...CCATGAAGAACTGCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATTCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp CCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTTGCATTATAAGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: PWSTAAWGKVLGAESTVGCIIRS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCTTATAATGCA...ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGGCAGTTCTTCATGGGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: AECSSQHSTADAKGSSSWVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...CCATGAAGAACTGCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCTTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHIFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTTTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FWLPVSGRAECSSQHSTAFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...AGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGATCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGSPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCATTCAGCTCCTCCCCTTaGGCATCTTTCGAACTTAGC +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPFSSSP*ASFELS
Trigger: GCTAAGTTCGAAAGATGCTCAAGGGGAGGAGCTGAA...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp AAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGTGGCCAATCTCAGACTaGAGACCAGCCGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: KVGSGSHTLATPGQQQLGWPISD*RPAALF
Trigger: AAAGAGAGCGGCTGGTCTTCAGTCTGAGATTGGCCA...CCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGCTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLLRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGAATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RMVLANSCSSALSPSTFSRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...GGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAATCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: LLMPRAVLHGDQGDLSRQSSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...TTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSAAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGAATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RMVLANSCSSALSPSTFSSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...GGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000184320.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: SLSGAHQEDSSRALTTCSFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...CGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: FWLPVSGRAECSSQHSTAGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...AGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGAAAGGGTTTTCCCACTaGCACCTCCAACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMKGFSH*HLQHCF
Trigger: GAAACAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTAAAGGGTTTTCCCACTaGCACCTCCAACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLKGFSH*HLQHCF
Trigger: GAAACAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCC +
Preference number: 4 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFESNPTA*YVGATA
Trigger: GGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCT...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AHDGKQEGSAGAERSIRSAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...AGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCACCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACAAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAATCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: VGDAQEESAWPSRTASEESSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCSSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGCTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRLLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGACTGTCCTCCCTTCTaGGGGCCTCCTCCAGCATCT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKADCPPF*GPPPAS
Trigger: AGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTC...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAACAAATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: GDAQEESAWPSRTASEEQMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...TTGTTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGTTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: SLSGAHQEDSSRALTTCSFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...CGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSRQHSKQKAEYDDRHRRVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...CCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp TGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CHDSTEHISQGFHTIPIRVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...TCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: ESTVGDAQEESAWPSRTAVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGATCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: GFWLPVSGRAECSSQHSTESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...AGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCTCTCACCAGAAGACAGCAGTGTCAGGAGTCTGCTTCAGGGATGAAGAATGAGAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLTRRQQCQESASGMKNERLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...CTCATTCTTCATCCCTGAAGCAGACTCCTGACACTGCTGTCTTCTGGTGAGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: PWSTAAWGKVLGAESTVGGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGTGCATTATAAGAAGCTaGTGGAGTGAGTCCACGGAG +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMCIIRS*WSESTE
Trigger: CTCCGTGGACTCACTCCACCAGCTTCTTATAATGCA...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGCTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRLSAGE*CWQTPA
Trigger: TGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAG...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGAGTTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAACT...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCGAAGAGCATCCACCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: VSPRRIKGSRSWQRAVRCRRAST*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGGTGGATGCTCTTCG...ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185143.2
3UTR CAA 72 bp CAACACCACTGGTGGTCTTGTTCCAGTCTGCTCTCCTaGTTCCAGTGCTCTTCTAAAGCCCACTGGCGAGGA +
Preference number: 4 (lower is better)
Translates to: QHHWWSCSSLLS*FQCSSKAHWRG
Trigger: TCCTCGCCAGTGGGCTTTAGAAGAGCACTGGAACAAGGAGAGCAGACTGGAACAAGACCACCAGTGGTGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
3UTR CAA 72 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTaGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTG +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDH*FEDVRAVIGYL
Trigger: CAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGATTCCACCTTCCCTACTaGTCGAGCACTTCCATACAT +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGFHLPY*SSTSIH
Trigger: ATGTATGGAAGTGCTCGATCAGTAGGGAAGGTGGAA...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: WQSLVWWRLRHLFLRFPLAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GGTACAAGGCTGTGGCTCTGTGGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GTRLWLCGCILRVKLRRWGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...CCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATCTTCTGCAGGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PFNFLQLVLKLLLSHLLQGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...CTGCAGAAGATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFTQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPTQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGCAGCAGCTGGCCAGTGGCAGTGCTAGGCTACTCCTGTGGGCCTGGACTCTTCATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: SSSWPVAVLGYSCGPGLFIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...GAAGAGTCCAGGCCCACAGGAGTAGCCTAGCACTGCCACTGGCCAGCTGCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAATTCAGCTCCTCCCCTTaGGCATCTTTCGAACTTAGC +
Preference number: 4 (lower is better)
Translates to: LLMPRAVLHGDQGDLSRQFSSSP*ASFELS
Trigger: GCTAAGTTCGAAAGATGCTCAAGGGGAGGAGCTGAA...TTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGAATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RMVLANSCSSALSPSTFSVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...GGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGATCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCTTCGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGC +
Preference number: 4 (lower is better)
Translates to: FQGSNTDSKDPDLPHGTFAESCR*DCPPFC
Trigger: GCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGC...GAAGGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: GIDHLFEDVRAVIGYLLEWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...CTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp AAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: KVGSGSHTLATPGQQQLGGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...CCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAGGATGTCAGGGCAGTaGTCGGCTATCTGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGDLSRQHSRMSGQ*SAICWR
Trigger: TCTCCAGCAGATAGCCGATCACTGCCCTGACATCCT...TGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHIWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGAGCTCCTCCTTCAGTTaGTCTACCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLSSSFS*STLFFI
Trigger: TATGAAAAATAAGGTAGAGCAACTGAAGGAGGAGCT...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAATCTCTCCAGCCTGGGTaGCCTTCTCCTCAGCCATAT +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKSLQPG*PSPQPY
Trigger: ATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGA...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCTGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGTGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTTGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHISSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: YSSNPWSTAAWGKVLGAESSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...CTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSLLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGCTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: PVSGRAECSSQHSTADAKLLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...CTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: DWHIQLAESGVVAAQTPVHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...AACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: HQEDSSRALTTCSRMSGQMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...CTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCATTCTCGGCCAGAGACTaGTGGGTGGAGGACAGCTTA +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGDLSRQHSFSARD*WVEDSL
Trigger: TAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGAGAA...TGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: VSPRRIKGSRSWQRAVRCARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CTTCTAAAGCCCACTGGCGAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGCTCATTCTCCCAAGCTaGCTGCTCACCATCTGCATT +
Preference number: 4 (lower is better)
Translates to: LLKPTGEEEVHSGLLKWELILPS*LLTICI
Trigger: AATGCAGATGGTGAGCAGGCAGCTTGGGAGAATGAG...CTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGGCTTTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR GCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHIAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCACCTCCTCCCGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: AGAERSIRSSLCPWSPPPVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...GGGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: KVGSGSHTLATPGQQQLGSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...CCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAATCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: LLMPRAVLHGDQGDLSRQSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...TTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHIESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTGGTCTGCGAAGAAGGAAAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: PIDAMRVENKECWSAKKERLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: APSSRSTESEWAPDELSGFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: TPGQQQLGARCWEQRALWILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...CCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp CAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCATCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QTPVPQVPSLAPWSPSLSSLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...TGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCTCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHISLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RIKGSRSWQRAVRCPIYNASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...GTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAAGCCTCCTCCAGCATCTaGGCACTCTTCTTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQASSSI*ALFFFS
Trigger: GGAGAAGAAGAAGAGTGCCCAGATGCTGGAGGAGGC...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp CTTCTAAAGCCCACTGGCGAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGTCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LLKPTGEEEVHSGLLKWESQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...CTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGGCTTTAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCATCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSASARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTCGGCCAGAGACTGCTaGGTGGAGGACAGCTTAGCT +
Preference number: 4 (lower is better)
Translates to: RGLGHGRGLSGVQYTTLTSARDC*VEDSLA
Trigger: AGCTAAGCTGTCCTCCACCCAGCAGTCTCTGGCCGA...AGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGAAGGGGTCTCGGTCATaGCAGAGGGCTGTCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKKGSRS*QRAVRC
Trigger: ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTT...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
3UTR CAA 72 bp AGCCCAGGTTACAATATAGCACTAGGCACACAAGGCTaGATCCAATGTGAGGGTGAGGGTGGTTCTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SPGYNIALGTQG*IQCEGEGGSGV
Trigger: GACCCCAGAACCACCCTCACCCTCACATTGGATCAAGCCTTGTGTGCCTAGTGCTATATTGTAACCTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR TCA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: WQQLQLLHTSHQAATMAIAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR TCA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GFWLPVSGRAECSSQHSTAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...AGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGTTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAAACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: VGDAQEESAWPSRTASEETQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TACCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTAATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: YLGLMMVNRRAARAQRGVIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...TACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTGGCCAATCTCAGACTaGAGACCAGCCGCTCTCTTT +
Preference number: 4 (lower is better)
Translates to: LHGDQGDLSRQHSKQKAEWPISD*RPAALF
Trigger: AAAGAGAGCGGCTGGTCTTCAGTCTGAGATTGGCCA...CTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCCTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVLRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCATCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGDLSRQHSSSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...TGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: RIKGSRSWQRAVRCPIYNSSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...GTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GFLFLEGQSAARSTPLLMKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...CATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACAGGCTGAGAGCTAAGGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: LLSTKSSAGETGNRLRAKVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...CTTAGCTCTCAGCCTGTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: GESTRAKASAPSSRSTESSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...AGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQSIGPG*FLLCQH
Trigger: GTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCT...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAATTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGT +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEFVSAV*AAAPGG
Trigger: ACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAA...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGAATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: RMVLANSCSSALSPSTFSWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...GGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFEGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGAAAGGGTTTTCCCACTaGCACCTCCAACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: ESTRAKASAPSSRSTESEKGFSH*HLQHCF
Trigger: GAAACAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGGCAGTTCTTCATGGTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: AECSSQHSTADAKGSSSWCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...CCATGAAGAACTGCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LLASCFWKGRVQLAALHCFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGCTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SLSGAHQEDSSRALTTCSLYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...CGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVSSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: SGFLFLEGQSAARSTPLLHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...CAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGACTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGLLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACACTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGTGTTGGCAAACTCCTaGAGCTCGGCGTTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: SVVPKEVSRQVQGCGSVVVLANS*SSALSP
Trigger: AGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACAC...AACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: WREANESVLQSHRRVWCQAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...TTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: WLPVSGRAECSSQHSTADVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGTCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQSACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACAGGCTGAGAGCTAAGTCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLSTKSSAGETGNRLRAKSACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...CTTAGCTCTCAGCCTGTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: FWLPVSGRAECSSQHSTAARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...AGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHIARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: WQSLVWWRLRHLFLRFPLFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: SRSTESEWAPDELSGFWLILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: VGKLLQLGVVPFNFLQLVHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...AACGAGTTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp TCTTCAAAGACCTGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: SSKTWREANESVLQSHRRSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCAGGTCTTTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAATCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGATCTCAGCATTGGTCCTaGCTGATTCCTCTTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGSQHWS*LIPLVP
Trigger: TGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGA...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPNLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTCTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KHLHERFMAEATQPSRGILSAGE*CWQTPA
Trigger: TGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAG...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AGAATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: RMVLANSCSSALSPSTFSVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...GGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIGSSPL*ALPRKA
Trigger: AGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCC...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp TGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGATTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CHDSTEHISQGFHTIPIRFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...TCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTGGTCTGCGAAGAAGGAATCTTCTGGAGGACATTaGCCTTCCGCTCCTTCACGT +
Preference number: 4 (lower is better)
Translates to: PIDAMRVENKECWSAKKESSGGH*PSAPSR
Trigger: ACGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGA...TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTACAAGGCTGTGGCTCTGTGGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GTRLWLCGCILRVKLRRWVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...CCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGTCCTTTTTGAGTCCTaGGGAAGCCAGGGAAGAAGC +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEVLFES*GSQGRS
Trigger: GCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGAC...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGAAGAAGCTGGTGGAGTaGGTCCACGGAGGATTAAGG +
Preference number: 4 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQKKLVE*VHGGLR
Trigger: CCTTAATCCTCCGTGGACTCACTCCACCAGCTTCTT...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp CCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: PKWVHVRRPVCGDPSQNSTLPGH*PLVRGC
Trigger: ACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGT...GCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR GCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: GVVPFNFLQLVLKLLLSHAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...ATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGGGACAACGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: WLPVSGRAECSSQHSTADFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTAGCTCCTCCTTCAGTTaGTCTACCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: PWSTAAWGKVLGAESTVGSSSFS*STLFFI
Trigger: TATGAAAAATAAGGTAGAGCAACTGAAGGAGGAGCT...ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCAAGCTCCTCCTTCAGTTaGTCTACCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSSSSFS*STLFFI
Trigger: TATGAAAAATAAGGTAGAGCAACTGAAGGAGGAGCT...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184838.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGGAGGGAGGCCAATGAGTCTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAATGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: WREANESVLQSHRRVWCQCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...TTGGCACCACACCCTCCTATGTGACTGAAGCACAGACTCATTGGCCTCCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR GCA 90 bp CATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HQEDSSRALTTCSRMSGQCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...CTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: SLSGAHQEDSSRALTTCSSSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...CGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCTCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHISNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGCTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: ESTRAKASAPSSRSTESELLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: KHLHERFMAEATQPSRGIFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGTTCTGGTCTTTCACTTaGCTTGAGGTGAGACTTTCC +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVFWSFT*LEVRLS
Trigger: GGAAAGTCTCACCTCAAGGCAAGTGAAAGACCAGAA...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp CTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: LHGDQGDLSRQHSKQKAEMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...CTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: WLPVSGRAECSSQHSTADFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGTCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: QLCQKKFLGRYKAVALWLSACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...CAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCAGACTCTCGAGGTGGTaGACGTGCATCTCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIRLSRW*TCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCT...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp TGGTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: WSPSLSGAHQEDSSRALTFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...GGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp CTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: LHGDQGDLSRQHSKQKAEHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...CTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATCTTCTGCAGTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PFNFLQLVLKLLLSHLLQSVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...CTGCAGAAGATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCATCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSASVTHL*TGSGFQ
Trigger: TTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGA...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAAGTTCTAAGAGGGGCTaGATGATCTGGTCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAESSKRG*MIWSGE
Trigger: CTCCCCAGACCAGATCATCCAGCCCCTCTTAGAACT...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGAAGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SRGILSSIPYKGTLHVREAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...TTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCAGTTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAACT...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000185139.8
3UTR CAA 72 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTaGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTAC +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGD*SRQHSKQKAEY
Trigger: GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACTTCCACCTTCCCTACTaGTCGAGCACTTCCATACAT +
Preference number: 4 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYFHLPY*SSTSIH
Trigger: ATGTATGGAAGTGCTCGATCAGTAGGGAAGGTGGAA...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CCATCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACATTCCACCTTCCCTACTaGTCGAGCACTTCCATACAT +
Preference number: 4 (lower is better)
Translates to: PSLSEAFPRMTLCTWMCTFHLPY*SSTSIH
Trigger: ATGTATGGAAGTGCTCGATCAGTAGGGAAGGTGGAA...TGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCATCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKASPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ESTRAKASAPSSRSTESEKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GIDHLFEDVRAVIGYLLEKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...CTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp AGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTCACTTGCCTTGAGGTaGGACTTTCCAACTCAGCTA +
Preference number: 4 (lower is better)
Translates to: RIKGSRSWQRAVRCPIYNSLALR*DFPTQL
Trigger: TAGCTGAGTTGGAAAGTCTCACCTCAAGGCAAGTGA...GTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGT +
Preference number: 4 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLWNGRI*SGHPHS
Trigger: ACTATGAGGATGACCACTTCAGATCCTCCCGTTCCA...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKTLPGH*PLVRGC
Trigger: ACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGT...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAACTCTTCCAGGGCATTaGCCACTTGTTCGAGGATGT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKATLPGH*PLVRGC
Trigger: ACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGT...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp AAGGTGGGCAGTGGATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: KVGSGSHTLATPGQQQLGCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...CCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGATCCACTGCCCACCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSAAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCACCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKAPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGTTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: ESTRAKASAPSSRSTESEFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CTTCTAAAGCCCACTGGCGAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGTTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LLKPTGEEEVHSGLLKWEFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...CTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGGCTTTAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCATTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCACTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKALYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCACTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSALYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGTGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: SLSGAHQEDSSRALTTCSCPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...CGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: ESTRAKASAPSSRSTESEHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GESTRAKASAPSSRSTESHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...AGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACACACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: KHLHERFMAEATQPSRGIHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTGGTCTGCGAAGAAGGAAATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: PIDAMRVENKECWSAKKEMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAAGCACCCACGTTTTCATaGTCACTTAGGTACATAGGG +
Preference number: 4 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQAPTFS*SLRYIG
Trigger: CCCTATGTACCTAAGTGACCATGAAAACGTGGGTGC...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKAEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QLCQKKFLGRYKAVALWLEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...CAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACAGGCTGAGAGCTAAGGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LLSTKSSAGETGNRLRAKESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...CTTAGCTCTCAGCCTGTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: PKWVHVRRPVCGDPSQNSESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...GCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: GIDHLFEDVRAVIGYLLEILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...CTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGGAATGTGTGTGCATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCTGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GNVCALRQTQLCQKKFLGWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...GCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAATGCACACACATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ESTRAKASAPSSRSTESEFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTGTTAATATCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LCFSHIGGCGAKPVPVLISLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...TATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CCA 90 bp CTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACAGGCTGAGAGCTAAGTCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: LLSTKSSAGETGNRLRAKSLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...CTTAGCTCTCAGCCTGTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTG +
Preference number: 4 (lower is better)
Translates to: RGLGHGRGLSGVQYTTLTHSSLD*LWLPML
Trigger: CAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTG...AGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: ATPGQQQLGARCWEQRALIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...CAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: DWHIQLAESGVVAAQTPVIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...AACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: GVVPFNFLQLVLKLLLSHRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...ATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGGGACAACGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPNLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHINLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTAGTTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAACT...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTACAAGGCTGTGGCTCTGTGGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGCTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: GTRLWLCGCILRVKLRRWLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...CCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACACAACTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: SLSEAFPRMTLCTWMCTQLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKAVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCT +
Preference number: 4 (lower is better)
Translates to: QLCQKKFLGRYKAVALWLVSADP*WCYLLP
Trigger: AGGCAAGAGATAACACCATCATGGATCTGCAGACAC...CAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGTTTAGGGTCTGCTTCTaGGTCTCAATCCTCAGCTCC +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKFRVCF*VSILSS
Trigger: GGAGCTGAGGATTGAGACTCAGAAGCAGACCCTAAA...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGTQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: GESTRAKASAPSSRSTESIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...AGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATCGTCCAGCATGTCCTTaGGGTCATGGATCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYRPACP*GHGSLQ
Trigger: CTGGAGAGATCCATGACCTCAAGGACATGCTGGACG...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AGAATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCTCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: RMVLANSCSSALSPSTFSSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...GGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCACTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGDLSRQHSLLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...TGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: VGKLLQLGVVPFNFLQLVHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...AACGAGTTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000184320.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCC +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTMDSSS*FTFSIA
Trigger: GGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCAT...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGDLSRQHSARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...TGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAAGCCAGAAGAGCTTCTTaGTTCATTTCCAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQARRAS*FISRTS
Trigger: GGAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGC...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GGTACAAGGCTGTGGCTCTGTGGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGCTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: GTRLWLCGCILRVKLRRWLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...CCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTGGTCTGCGAAGAAGGAACTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PIDAMRVENKECWSAKKELFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGTCATCCTGGAGAGCCTaGATTGTCATCTGCATGTGC +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKSSWRA*IVICMC
Trigger: GCACATGCAGATGACAATCCAGGCTCTCCAGGATGA...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCTCAGCATGCAGCCTCTaGAAGTTCTCCTCTGTGAGC +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSISACSL*KFSSVS
Trigger: GCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGA...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAATGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: ERDLWATLNSFESVNWAEWISPA*VPFSSA
Trigger: GGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCA...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCATCTCTGGACTGGCTCTaGCTTCCAATGTTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKASLDWL*LPMLLH
Trigger: ATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGA...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCACGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSARSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGCTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKLSAGE*CWQTPA
Trigger: TGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAG...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCACTATCTGCTGGAGAATaGTGTTGGCAAACTCCTGCA +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKALSAGE*CWQTPA
Trigger: TGCAGGAGTTTGCCAACACCATTCTCCAGCAGATAG...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR TCA 90 bp CAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGCTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: QLCQKKFLGRYKAVALWLLYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...CAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAACTGTATATTCTCCATTaGAAGGGTTTTCCCACTGCC +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAELYILH*KGFPTA
Trigger: GGCAGTGGGAAAACCCTTTCAATGGAGAATATACAG...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCCTAACAGGAGGGAGGTaGTGTTCTCCAAATGCTATG +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTLTGGR*CSPNAM
Trigger: CATAGCATTTGGAGAACATCACCTCCCTCCTGTTAG...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCTCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCAT +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSISPEAS*WTHPEH
Trigger: ATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGA...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGAAAAAGGGTTTTCCCACTaGCACCTCCAACACTGTTTC +
Preference number: 4 (lower is better)
Translates to: SRGILSSIPYKGTLHVREKGFSH*HLQHCF
Trigger: GAAACAGTGTTGGAGGTGGCAGTGGGAAAACCCTTT...TTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCAAACAGCTCTTTGGCTTaGCTCTCGTGCTCAGCATGC +
Preference number: 4 (lower is better)
Translates to: AEYTGERIDREEMLFTRPNSSLA*LSCSAC
Trigger: GCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTT...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp TCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: SVVPKEVSRQVQGCGSVVWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...AACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGTTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: LSRQHSKQKAEYDDRHRRFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...CCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCCTGTACACCTCCATTTaGTTCATCTCTTCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSILYTSI*FISSSR
Trigger: GCGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAG...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCATGTCCGTTCTTTATCTaGAAGAGCCTCCTCCAAAGT +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKACPFFI*KSLLQS
Trigger: ACTTTGGAGGAGGCTCTTGCAGATAAAGAACGGACA...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: PKWVHVRRPVCGDPSQNSHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...GCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAATCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTCTTCTGTTTGGGCCTTaGTGGATTCATCTTTGTACC +
Preference number: 4 (lower is better)
Translates to: RGLGHGRGLSGVQYTTLTLLFGP*WIHLCT
Trigger: GGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG...AGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACCTTTTCCCGTTTCAGTaGAGCCACTTCTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TVNILLLSTKSSAGETGNLFPFQ*SHFFLG
Trigger: ACCCAAGAAGAAGTGGCTGCACTGAAACGGGAAAAG...GTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: AIRVTTVNILLLSTKSSAVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...TGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKESPLL*SISRSF
Trigger: GAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTC...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: CHDSTEHISQGFHTIPIRILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...TCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAAATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTTTTCTATCTTCTTCTaGAGGACATTGACCTTCCGC +
Preference number: 4 (lower is better)
Translates to: LHGDQGDLSRQHSKQKAEFSIFF*RTLTFR
Trigger: GCGGAAGGTCAATGTCCTCCAGAAGAAGATAGAAAA...CTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAETQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp CTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTGTTAATACTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LCFSHIGGCGAKPVPVLILRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...TATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR TCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGCTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQLRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAAAGAAGCATGCTCTTTaGTATCCAAGAGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEKKHAL*YPREKP
Trigger: AGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTT...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCAGCCTGGATTGTCATCTaGATGTGCTGGTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: AEYTGERIDREEMLFTRPAWIVI*MCWFSS
Trigger: GGAGGAAAACCAGCACATGCAGATGACAATCCAGGC...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCACCCCAGTCCTACTGCTaGTATCTTGCTGAAACAGCT +
Preference number: 4 (lower is better)
Translates to: AEYTGERIDREEMLFTRPPQSYC*YLAETA
Trigger: AGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGG...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCTGGCAGAAAGTCCTTTaGTCTGGAGCATCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIWQKVL*SGASPE
Trigger: TTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCA...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCATTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGG +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKAFSFSF*SKRLSR
Trigger: CCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCTCTCACCAGAAGACAGCAGTGTCAGGAGTCTGCTTCAGGGATGAAGAATGAGTTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: PLTRRQQCQESASGMKNEFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...CTCATTCTTCATCCCTGAAGCAGACTCCTGACACTGCTGTCTTCTGGTGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACTTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTAGGATGGCAGCCCTTTaGTCCTTAGCAGTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCRMAAL*SLAVRD
Trigger: GTCCCTCACTGCTAAGGAGCAAAGGGCTGCCATCCT...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGTCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGTCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGCACCATTTCACGCTCTaGAGTTATCTGTACACTTTC +
Preference number: 4 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQHHFTL*SYLYTF
Trigger: GAAAGTGTACAGATAACTGCAGAGCGTGAAATGGTG...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATCTTCTGCAGTTCTGGTCTTTCACTTaGCTTTCCAACTCAGCTATC +
Preference number: 4 (lower is better)
Translates to: PFNFLQLVLKLLLSHLLQFWSFT*LSNSAI
Trigger: GATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAA...CTGCAGAAGATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184320.8
CDS-3UTR CCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCAGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: AEYTGERIDREEMLFTRPEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGGGAGCCCACGCTCCATaGAAGAAATTTTTGAATCCT +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKGAHAP*KKFLNP
Trigger: AGGATTCAAAAATTTCTTCCATGGAGCGTGGGCTCC...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp ACCCTCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: TLTRNSLQHPIQGNTSCQILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...CTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTTCTAAAGCCCACTGGCGAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: LLKPTGEEEVHSGLLKWEIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...CTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGGCTTTAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQNLLLF*SSSKRG
Trigger: GCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTT...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp AGAGCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTATTATAAGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RAIRVTTVNILLLSTKSSIIRSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCTTATAAT...ACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp TCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTATTATAAGAAGCTGGTaGAGTGAGTCCACGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SVVPKEVSRQVQGCGSVVIIRSW*SESTED
Trigger: ATCCTCCGTGGACTCACTCCACCAGCTTCTTATAAT...AACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CCA 90 bp GCTAAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCGCTGGAGAATGGTGTTaGCAAACTCCTGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: AKPHSDFFILNVRKYLLIAGEWC*QTPAAR
Trigger: CCGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGC...GATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
3UTR CAA 72 bp ATAGTGCAGAGATCAGACACAGTCTGCCTTACAAACTaGCCTTCTCAATTAAGCACATGTCCTGCAGGGCTC +
Preference number: 4 (lower is better)
Translates to: IVQRSDTVCLTN*PSQLSTCPAGL
Trigger: GAGCCCTGCAGGACATGTGCTTAATTGAGAAGGCAAGTTTGTAAGGCAGACTGTGTCTGATCTCTGCACTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTTQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTAATTTTTCATAAACTTTaGGTGGCTCCTGTACACCTC +
Preference number: 4 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLIFHKL*VAPVHL
Trigger: GAGGTGTACAGGAGCCACTCAAAGTTTATGAAAAAT...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTACAAGGCTGTGGCTCTGTGGTTGTATCTTGAGAGTAAAGCTGAGAAGGTGGCTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GTRLWLCGCILRVKLRRWLRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...CCACCTTCTCAGCTTTACTCTCAAGATACAACCACAGAGCCACAGCCTTGTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: MFQGSNTDSKDPDLPHGTCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...GGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAATTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCATTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: KGSSSWRPGRLEQATFKAFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...TGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp AGAGCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: RAIRVTTVNILLLSTKSSHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...ACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACTCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: TVNILLLSTKSSAGETGNSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...GTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCGCAAGGCTTTTGTCTTaGCAGAATCAGGGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIARLLS*QNQGHF
Trigger: AAAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGC...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp GAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGATATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: EHISQGFHTIPIRGFSKDIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...ATCCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFEIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATCGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCT +
Preference number: 4 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYRSTSV*ALLDSS
Trigger: AGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
3UTR CAA 72 bp GGAGGAGGGAATGTGTGTGCATTAAGACAAACTCAGTaGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCT +
Preference number: 4 (lower is better)
Translates to: GGGNVCALRQTQ*CQKKFLGRYKA
Trigger: AGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAATGCACACACATTCCCTCCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSITQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR TCA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAAGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTG +
Preference number: 4 (lower is better)
Translates to: ERDLWATLNSFESVNWAEGLWFV*LEREDL
Trigger: CAGATCCTCCCGTTCCAATCAGACGAACCATAAACC...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp ACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACTTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: TVNILLLSTKSSAGETGNFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...GTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR GCA 90 bp CCCATAGATGCCATGAGGGTGGAGAACAAAGAATGCTGGTCTGCGAAGAAGGAAAGCTCCTCCTTCAGTTaGTCTACCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: PIDAMRVENKECWSAKKESSSFS*STLFFI
Trigger: TATGAAAAATAAGGTAGAGCAACTGAAGGAGGAGCT...TTCCTTCTTCGCAGACCAGCATTCTTTGTTCTCCACCCTCATGGCATCTATGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR GCA 90 bp GGGAATGTGTGTGCATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATT +
Preference number: 4 (lower is better)
Translates to: GNVCALRQTQLCQKKFLGSSLSR*SFKRSI
Trigger: AATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGA...GCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAATGCACACACATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCAGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: AEYTGERIDREEMLFTRPVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp AAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAG +
Preference number: 4 (lower is better)
Translates to: KPHSDFFILNVRKYLLIPEETAL*LASRAQ
Trigger: CTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTC...TGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGTTCATAAACTTTGAGTaGCTCCTGTACACCTCCATT +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKFINFE*LLYTSI
Trigger: AATGGAGGTGTACAGGAGCCACTCAAAGTTTATGAA...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CCA 90 bp ATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATT +
Preference number: 4 (lower is better)
Translates to: MPRAVLHGDQGDLSRQHSIHLCT*KSLSPI
Trigger: AATTGGAGAGAGAGATTTCCAGGTACAAAGATGAAT...TGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTT +
Preference number: 4 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYAPSKW*FWKLHL
Trigger: AAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGC...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR TCA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTC +
Preference number: 4 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYTQSPI*LQHLNF
Trigger: GAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGT...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR TCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCCTGAGAATTGGTTCGTaGGAGTTTCTAGCTTTGTTT +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSILRIGS*EFLALF
Trigger: AAACAAAGCTAGAAACTCTCACGAACCAATTCTCAG...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATT +
Preference number: 4 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYCTTRY*SFQMVI
Trigger: AATCACCATTTGGAAGGAGCAGTACCGAGTTGTACA...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR GCA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCTTTTCAAATCTCCGGTaGATCTCCTCTCTCAACATA +
Preference number: 4 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIFSNLR*ISSLNI
Trigger: TATGTTGAGAGAGGAGATGCACCGGAGATTTGAAAA...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGG +
Preference number: 4 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYHSSFF*SRAISR
Trigger: CCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTG...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CCA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGTCATCTGCATGTGCTaGTTTTCCTCCTGTACAACT +
Preference number: 4 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCVICMC*FSSCTT
Trigger: AGTTGTACAGGAGGAAAACCAGCACATGCAGATGAC...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGAGTTCCTGTTTCACCTaGCCAATCTTATTTTTCATA +
Preference number: 4 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKSSCFT*PILFFI
Trigger: TATGAAAAATAAGATTGGCCAGGTGAAACAGGAACT...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR GCA 90 bp AAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCATCCAATGTTGCTTCATaGGCCTTTTTCAACTGTGAC +
Preference number: 4 (lower is better)
Translates to: KPHSDFFILNVRKYLLIPSNVAS*AFFNCD
Trigger: GTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGA...TGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CCA 90 bp GCTAAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCATTCTGTGTCCTTTCTaGACAGTTCCTGTTTCACCT +
Preference number: 4 (lower is better)
Translates to: AKPHSDFFILNVRKYLLIILCPF*TVPVSP
Trigger: AGGTGAAACAGGAACTGTCCAGAAAGGACACAGAAT...GATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GACACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: DTDGRTGTSSWQSLVWWRETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...CCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGATTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: TDGRTGTSSWQSLVWWRLISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...GAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: GGGSDTCSSGSLSGSLVTETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...GGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 90 bp CATCCTTCTTACGGAGACTGTCCTGCAGTTGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGCGGGCCTCCTCCAGCATCTGGGCAC +
Preference number: 5 (lower is better)
Translates to: HPSYGDCPAVAESCR*DCPPFCGPPPASGH
Trigger: GTGCCCAGATGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTCCGTAAGAAGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 90 bp CCTAAGCGAGGGGACCGAGGAAGCCGAGGTGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTCCCTACTGATCGAGCACTTCCATAC +
Preference number: 5 (lower is better)
Translates to: PKRGDRGSRGDRPGL*LLGSTFPTDRALPY
Trigger: GTATGGAAGTGCTCGATCAGTAGGGAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATCACCTCGGCTTCCTCGGTCCCCTCGCTTAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TACCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTAGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: YLGLMMVNRRAARAQRGVETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...TACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCTGCTGGAGAATGGTGTaGGCAAACTCCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLCWRMV*ANSCSS
Trigger: CGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCA...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CAA 90 bp GACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCTCTTCCACCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: DWHIQLAESGVVAAQTPVLFHLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGTGGAAGAG...AACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
CDS GCA 90 bp CTGCTCCAAAAGACTCTCGAGGTGGTGGACGTGCATCTCCGCCTCTaGGAGCCGTCGCGTTCTCTCATGGTCTTCCTCTGTAGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LLQKTLEVVDVHLRL*EPSRSLMVFLCSFG
Trigger: GCCAAAGCTACAGAGGAAGACCATGAGAGAACGCGACGGCTCGCAGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCTTTTGGAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: GTSSWQSLVWWRLRHLFLKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...GAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGATGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: AGLAHPAGRVWCGGGSDTLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...GGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCACCTCCTCCCGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: AGAERSIRSSLCPWSPPPETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...GGGAGGAGGTGACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTTTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCTGCTGGAGAATGGTGTaGGCAAACTCCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFCWRMV*ANSCSS
Trigger: CGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCA...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CAA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCTGCTGGAGAATGGTGTaGGCAAACTCCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVCWRMV*ANSCSS
Trigger: CGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCA...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CAA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCGACTCTTCCAGGGCATaGACCACTTGTTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSDSSRA*TTCSRM
Trigger: CATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS-3UTR CAA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTCTTCCACCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLLFHLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGTGGAAGAG...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
CDS TCA 90 bp CTTGCCTCTCGTGCTCAGCATGCAGCCTCTGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCTCCCCAGTCCTACTGCTGCTATCTT +
Preference number: 5 (lower is better)
Translates to: LASRAQHAASGSSPL*ALPRKAPQSYCCYL
Trigger: AAGATAGCAGCAGTAGGACTGGGGAGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGAGCACGAGAGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CCA 90 bp TGGTGGACGTGCATCTCCGCCTCTGCGAGCCGTCGCGTTCTCTCATaGTCTTCCTCTGTAGCTTTGGCAGAAAGTCCTTTGCTCTGGAGC +
Preference number: 5 (lower is better)
Translates to: WWTCISASASRRVLS*SSSVALAESPLLWS
Trigger: GCTCCAGAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGACCATGAGAGAACGCGACGGCTCGCAGAGGCGGAGATGCACGTCCACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: ESTVGDAQEESAWPSRTAKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTCCAAGCTCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: APSSRSTESEWAPDELSGISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...GCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGAGCTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GAGAGCACTGTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTCCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: ESTVGDAQEESAWPSRTAPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...AGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCACAGTGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCCCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: WQSLVWWRLRHLFLRFPLPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCTTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: CGGGSDTCSSGSLSGSLVFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...GACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGAACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: DGRTGTSSWQSLVWWRLRTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...TCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTTTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GFWLPVSGRAECSSQHSTFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...AGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS TCA 90 bp CCAACACTGTTTCCAGAACTCCCTCCTGTACTATTTGTTCGCCGATaGCCTAAGCGAGGGGACCGAGGAAGCCGAGGTGATCGCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PTLFPELPPVLFVRR*PKRGDRGSRGDRPG
Trigger: TCCTGGGCGATCACCTCGGCTTCCTCGGTCCCCTCGCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGAGTTCTGGAAACAGTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 90 bp TCTTCAATCCTGTCATCCTTCTTACGGAGACTGTCCTGCAGTTGCTaGGAGCTGTCGCTGAGACTGTCCTCCCTTCTGCGGGCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSILSSFLRRLSCSC*ELSLRLSSLLRASS
Trigger: GGAGGAGGCCCGCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTCCGTAAGAAGGATGACAGGATTGAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 90 bp CTCGTGCTCAGCATGCAGCCTCTGGAAGTTCTCCTCTGTGAGCTCTaGCACGCAAGGCTCCCCAGTCCTACTGCTGCTATCTTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: LVLSMQPLEVLLCEL*HARLPSPTAAILLK
Trigger: TTTCAGCAAGATAGCAGCAGTAGGACTGGGGAGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGAGCACGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTCCCTCCTGTACTATTaGTTCGCCGATGACCTAAGC +
Preference number: 5 (lower is better)
Translates to: TSSWQSLVWWRLRHLFLRSLLYY*FADDLS
Trigger: GCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGA...CCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCTTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFLAESP*LWSISR
Trigger: TCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAA...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: WQSLVWWRLRHLFLRFPLQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: VSPRRIKGSRSWQRAVRCPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...ACACCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTTTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: SRSTESEWAPDELSGFWLFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CCGACGGCCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCACCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: PTAGLAHPAGRVWCGGGSPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...TGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGGCCGTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: GVSPRRIKGSRSWQRAVRAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...CCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CCGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: PDWHIQLAESGVVAAQTPTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...AGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CGGACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RTGTSSWQSLVWWRLRHLTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...CAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: DWHIQLAESGVVAAQTPVTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...AACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCAACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGACTCTTCCAGGGCATaGACCACTTGTTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: PVSGRAECSSQHSTADAKDSSRA*TTCSRM
Trigger: CATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC...CTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS GCA 90 bp TTCTCTTTTTCCTTCTGCTCCAAAAGACTCTCGAGGTGGTGGACGTaGATCTCCGCCTCTGCGAGCCGTCGCGTTCTCTCATGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: FSFSFCSKRLSRWWT*ISASASRRVLSWSS
Trigger: GGAAGACCATGAGAGAACGCGACGGCTCGCAGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTTCCCTCCTGTACTATTaGTTCGCCGATGACCTAAGC +
Preference number: 5 (lower is better)
Translates to: SRSTESEWAPDELSGFWLSLLYY*FADDLS
Trigger: GCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGA...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: LLASCFWKGRVQLAALHCRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...GCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGTTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRLAESP*LWSISR
Trigger: TCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAA...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTCTTTGTCCCTGGTCTCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GGQRGRREEYSFFSLSLVSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...GACCAGGGACAAAGAGAAGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCATTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCATCCCTCCTGTACTATTaGTTCGCCGATGACCTAAGC +
Preference number: 5 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPSLLYY*FADDLS
Trigger: GCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGA...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: AAQTPVPQVPSLAPWSPSTVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...GGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: PWSTAAWGKVLGAESTVGPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...ACCCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTGCTGATGCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAAAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: LLMPRAVLHGDQGDLSRQKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...TTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGCATCAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: FLFLEGQSAARSTPLLMPRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...TGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAACAAAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: GDAQEESAWPSRTASEEQRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...TTGTTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGATTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGLAESP*LWSISR
Trigger: TCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAA...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCTCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: WQQLQLLHTSHQAATMAISSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CAA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCTGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: FWLPVSGRAECSSQHSTAQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...AGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: AHDGKQEGSAGAERSIRSQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...AGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: WLPVSGRAECSSQHSTADQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGCCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: LSTSHRASTPSLSEAFPRPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...CCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: WLPVSGRAECSSQHSTADAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TACCTGGGGCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTAAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: YLGLMMVNRRAARAQRGVSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...TACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGCCCCAGGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: RLRHLFLRFPLWLLGHPPSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...AGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: VWWRLRHLFLRFPLWLLGSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...ACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGTTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: STSGGLFQGIDHLFEDVRFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...CCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGTTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SLSGAHQEDSSRALTTCSFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...CGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGTTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFEFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 90 bp TCCTCCCGCTCCTCACTACTCAAAGCCCCATTTGACTTCAGCATCTaGATTTCCTCTTCCAGGTCTCGGAGCCCACGCTCCATGGAAGAA +
Preference number: 5 (lower is better)
Translates to: SSRSSLLKAPFDFSI*ISSSRSRSPRSMEE
Trigger: TTCTTCCATGGAGCGTGGGCTCCGAGACCTGGAAGAGGAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTAGTGAGGAGCGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: SSWQSLVWWRLRHLFLRFTVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...GAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: WQSLVWWRLRHLFLRFPLTVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...GAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp ACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGAGCAGAGAGCACTGTGGGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: TPGQQQLGARCWEQRALWGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...CCACAGTGCTCTCTGCTCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: WHIQLAESGVVAAQTPVPGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...AGGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCCGGAGCACGGAATCTGAGTGGGCTCCAGATGAGCTGAGTGGCTTCTGGCTTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: SRSTESEWAPDELSGFWLPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...AAGCCAGAAGCCACTCAGCTCATCTGGAGCCCACTCAGATTCCGTGCTCCGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AAGCACCTCCATGAGAGGTTCATGGCAGAGGCCACCCAACCCTCACGAGGAATTATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: KHLHERFMAEATQPSRGIISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...AATTCCTCGTGAGGGTTGGGTGGCCTCTGCCATGAACCTCTCATGGAGGTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTLAESP*LWSISR
Trigger: TCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAA...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: WLPVSGRAECSSQHSTADSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTCATGATGGTAAACAGGAGGGCAGCGCGGGCGCAGAGAGGAGTATTCGTTCTTCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: AHDGKQEGSAGAERSIRSSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...AGAACGAATACTCCTCTCTGCGCCCGCGCTGCCCTCCTGTTTACCATCATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATTGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: WLPVSGRAECSSQHSTADCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCTGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: SKQKAEYDDRHRRPDWHICKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...GATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCCTACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: LAHPAGRVWCGGGSDTCSYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...GGAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGATTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGTTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFEFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGACTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: FWLPVSGRAECSSQHSTALWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...AGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: GSDTCSSGSLSGSLVTLLTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...AAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CCCTTCAACTTTCTCCAACTCGTTCTGAAGCTGCTCCTGAGTCATCTTCTGCAGGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: PFNFLQLVLKLLLSHLLQETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...CTGCAGAAGATGACTCAGGAGCAGCTTCAGAACGAGTTGGAGAAAGTTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000184320.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GTGGTGGCGGCTCAGACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: VVAAQTPVPQVPSLAPWSLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...TGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGTCTGAGCCGCCACCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp ACTGGCACATCCAGCTGGCAGAGTCTGGTGTGGTGGCGGCTCAGACACCTGTTCATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: TGTSSWQSLVWWRLRHLFILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...GAACAGGTGTCTGAGCCGCCACCACACCAGACTCTGCCAGCTGGATGTGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
CDS GCA 90 bp GACTGCTGGGTGGAGGACAGCTTAGCTTTCATGGACTCCAGTTCCTaGTTCACCTTCTCCATAGCCATCAACAGCTCTTCCACCTGTTTC +
Preference number: 5 (lower is better)
Translates to: DCWVEDSLAFMDSSS*FTFSIAINSSSTCF
Trigger: GAAACAGGTGGAAGAGCTGTTGATGGCTATGGAGAAGGTGAAGCAGGAACTGGAGTCCATGAAAGCTAAGCTGTCCTCCACCCAGCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TGGCAGCAGCTGCAGCTGCTTCACACAAGCCATCAGGCTGCCACCATGGCTATCACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: WQQLQLLHTSHQAATMAITVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...GATAGCCATGGTGGCAGCCTGATGGCTTGTGTGAAGCAGCTGCAGCTGCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CAA 90 bp CTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LFLEGQSAARSTPLLMPRTVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...CCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: PVSGRAECSSQHSTADAKGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...CTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: IQSRRQSTMTDTDGRTGTCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...TGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGAGTGAGTCCACGGAGGATTAAGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: GVSPRRIKGSRSWQRAVRYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...CCTGACAGCCCTCTGCCATGACCGAGACCCCTTAATCCTCCGTGGACTCACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACCCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: HGDQGDLSRQHSKQKAEYPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...GTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGTTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: LSRQHSKQKAEYDDRHRRFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...CCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: LVRSTSGGLFQGIDHLFETCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...CTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000184320.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAACAAAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: GDAQEESAWPSRTASEEQSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...TTGTTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTTCTGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: ASGFLFLEGQSAARSTPLLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...CAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCAGAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCGGACTGGCACATCCCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: QSRRQSTMTDTDGRTGTSLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...GGATGTGCCAGTCCGGCCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCAGAGTGCAGCTCGCAGCACTCCACTGCTGATGCCAAGGGCAGTTCTTCATGGCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: AECSSQHSTADAKGSSSWLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...CCATGAAGAACTGCCCTTGGCATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACACAATTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SLSEAFPRMTLCTWMCTQFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAATTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CCAAAATGGGTACATGTAAGGAGGCCTGTCTGTGGTGATCCCTCACAGAACAGCGACTCTTCCAGGGCATaGACCACTTGTTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: PKWVHVRRPVCGDPSQNSDSSRA*TTCSRM
Trigger: CATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC...GCTGTTCTGTGAGGGATCACCACAGACAGGCCTCCTTACATGTACCCATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS TCA 90 bp AGCCATCAACAGCTCTTCCACCTGTTTCTCAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCACCATTTCACGCTCTGCAGTTATCTG +
Preference number: 5 (lower is better)
Translates to: SHQQLFHLFLSIGPG*FLLCQHHFTLCSYL
Trigger: CAGATAACTGCAGAGCGTGAAATGGTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGTGGAAGAGCTGTTGATGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp ACACCTGTTCCTCAGGTTCCCTCTCTGGCTCCTTGGTCACCCTCCTTGTCAGGAACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: TPVPQVPSLAPWSPSLSGTVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...TCCTGACAAGGAGGGTGACCAAGGAGCCAGAGAGGGAACCTGAGGAACAGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGATCGGCTATCTGCTGGAGCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: GIDHLFEDVRAVIGYLLEPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...CTCCAGCAGATAGCCGATCACTGCCCTGACATCCTCGAACAAGTGGTCAATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GCCAAGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: AKGSSSWRPGRLEQATFKRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...TTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GTGGGTGATGCTCAGGAGGAATCAGCCTGGCCCTCCAGGACAGCTTCTGAGGAATACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: VGDAQEESAWPSRTASEEYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...TTCCTCAGAAGCTGTCCTGGAGGGCCAGGCTGATTCCTCCTGAGCATCACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCCCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAACCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: GSSSWRPGRLEQATFKAEPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACACAACCTGTACACCTCCATTaGCTTCATCTCTTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: SLSEAFPRMTLCTWMCTQPVHLH*LHLFLP
Trigger: CGGGAGGAAGAGATGAAGCAAATGGAGGTGTACAGG...TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: VGKLLQLGVVPFNFLQLVLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...AACGAGTTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GTCACCCTCCTTGTCAGGAGCACATCAGGAGGACTCTTCCAGGGCATTGACCACCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: VTLLVRSTSGGLFQGIDHLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...GTGGTCAATGCCCTGGAAGAGTCCTCCTGATGTGCTCCTGACAAGGAGGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGAATTTTGTGTCTGCTGTTaGAGCTGCTGCACCAGGCGG +
Preference number: 5 (lower is better)
Translates to: SRGILSSIPYKGTLHVREFCVCC*SCCTRR
Trigger: CCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAA...TTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCTTCCTGTTTCTGGAAGGGCAGAGTGCAGCTCGCAGCACTCCACTGCTGATATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: WLPVSGRAECSSQHSTADILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...ATCAGCAGTGGAGTGCTGCGAGCTGCACTCTGCCCTTCCAGAAACAGGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
CDS GCA 90 bp CTCCGGTGCATCTCCTCTCTCAACATATTATTCTCTTTTTCCTTCTaGTCCAAAAGACTCTCGAGGTGGTGGACGTGCATCTCCGCCTCT +
Preference number: 5 (lower is better)
Translates to: LRCISSLNILFSFSF*SKRLSRWWTCISAS
Trigger: AGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCTTTTGGAGCAGAAGGAAAAAGAGAATAATATGTTGAGAGAGGAGATGCACCGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS GCA 90 bp TCCTCCAAAGTTGTCAGAGCTGTGTCTGTGTTAGTGGTGTCCGCCTaGAGAGACTTGACTCGCTCTTTCAAGCTGCTCATCTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: SSKVVRAVSVLVVSA*RDLTRSFKLLICFS
Trigger: AGAAAAGCAGATGAGCAGCTTGAAAGAGCGAGTCAAGTCTCTGCAGGCGGACACCACTAACACAGACACAGCTCTGACAACTTTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 90 bp AGCCGCGAGTCCTTTTTGAGTCCTGAGGAAGCCAGGGAAGAAGCATaGTCTTTGATATCCAAGAGAGAAGCCTCCTTTTCTGAGAGGTCT +
Preference number: 5 (lower is better)
Translates to: SRESFLSPEEAREEA*SLISKREASFSERS
Trigger: AGACCTCTCAGAAAAGGAGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGACTCGCGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACACAATCCCTCCTGTACTATTaGTTCGCCGATGACCTAAGC +
Preference number: 5 (lower is better)
Translates to: SLSEAFPRMTLCTWMCTQSLLYY*FADDLS
Trigger: GCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGA...TTGTGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTGAGGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: ESTRAKASAPSSRSTESEGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...CTCAGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCTTCAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATG +
Preference number: 5 (lower is better)
Translates to: FQGSNTDSKDPDLPHGTFKQLFG*PLVLSM
Trigger: CATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTT...GAAGGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTAATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTLAESP*LWSISR
Trigger: TCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAA...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp ACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACTTCTTCTGGAGGACATaGACCTTCCGCTCCTTCACG +
Preference number: 5 (lower is better)
Translates to: TVNILLLSTKSSAGETGNFFWRT*TFRSFT
Trigger: CGTGAAGGAGCGGAAGGTCAATGTCCTCCAGAAGAA...GTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AATGGTGTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAACTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCA +
Preference number: 5 (lower is better)
Translates to: NGVGKLLQLGVVPFNFLQLWLPM*LHAPFS
Trigger: TGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAG...TTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAACACCATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: GESTRAKASAPSSRSTESLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...AGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AACATGTTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGTGCTGGAGAATGGTGTaGGCAAACTCCTGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: NMFQGSNTDSKDPDLPHGCWRMV*ANSCSS
Trigger: CGAGCTGCAGGAGTTTGCCAACACCATTCTCCAGCA...CCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAACATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS TCA 90 bp CTTTGGCAGAAAGTCCTTTGCTCTGGAGCATCTCCAGAAGCTTCTTaGTGGACTCATCCCGAGCATTTAGGGTCTGCTTCTGAGTCTCAA +
Preference number: 5 (lower is better)
Translates to: LWQKVLCSGASPEAS*WTHPEHLGSASESQ
Trigger: TTGAGACTCAGAAGCAGACCCTAAATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS GCA 90 bp GTGATGTTCTCCAAATGCTATGGTATCACTAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCCCATAGCAGTCATCCTAACACCGTA +
Preference number: 5 (lower is better)
Translates to: VMFSKCYGITSNPTA*YVGATAHSSHPNTV
Trigger: TACGGTGTTAGGATGACTGCTATGGGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCTAGTGATACCATAGCATTTGGAGAACATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 90 bp CTCTCATGGTCTTCCTCTGTAGCTTTGGCAGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTCTTGATGGACTCATCCCGAGCATTT +
Preference number: 5 (lower is better)
Translates to: LSWSSSVALAESPLL*SISRSFLMDSSRAF
Trigger: AAATGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGACCATGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTTTAAGAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCA +
Preference number: 5 (lower is better)
Translates to: WLGSQANSSKVEVRLTFKRRNSS*ACLSCS
Trigger: TGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCT...CTTAAAGGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAATCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: GSSSWRPGRLEQATFKAESSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGGCTCTGTGGTTGTCTTCCTCTGTAGCTTaGGCAGAAAGTCCTTTGCTC +
Preference number: 5 (lower is better)
Translates to: QLCQKKFLGRYKAVALWLSSSVA*AESPLL
Trigger: GAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA...CAACCACAGAGCCACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGAGAAAGCACTCGTGCTAAAGCTTCAGCTCCAAGCTCCCGGAGCACGGAATCTTACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: GESTRAKASAPSSRSTESYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...AGATTCCGTGCTCCGGGAGCTTGGAGCTGAAGCTTTAGCACGAGTGCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGAGGCTTTTCCAAGGTACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: LSTSHRASTPSLSEAFPRYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...CCTTGGAAAAGCCTCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTTCTAAAGCCCACTGGCGAGGAAGAGGTACACTCAGGCCTTCTCAAGTGGGAGCCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: LLKPTGEEEVHSGLLKWEPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...CTCCCACTTGAGAAGGCCTGAGTGTACCTCTTCCTCGCCAGTGGGCTTTAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCAGGAGGACTCTTCCAGGGCATTGACCACTTGTTCGAGGATGTCAGGGCAGTGCCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: SGGLFQGIDHLFEDVRAVPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...CACTGCCCTGACATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTCCTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGAAGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTG +
Preference number: 5 (lower is better)
Translates to: SRGILSSIPYKGTLHVREAISRV*SRESFL
Trigger: CAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGC...TTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CCATCCCTATCCGAGGCTTTTCCAAGGATGACACTGTGCACATGGATGTGCACAACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: PSLSEAFPRMTLCTWMCTTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...TGTGCACATCCATGTGCACAGTGTCATCCTTGGAAAAGCCTCGGATAGGGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AGGGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RAVLHGDQGDLSRQHSKQTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...CTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCTTCACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: FQGSNTDSKDPDLPHGTFTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...GAAGGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: TVNILLLSTKSSAGETGNTCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...GTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TCACGAGGAATTCTCTCCAGCATCCCATACAAGGGAACACTTCATGTCAGGGAAACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCT +
Preference number: 5 (lower is better)
Translates to: SRGILSSIPYKGTLHVRETCFSA*VLADSS
Trigger: AGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGT...TTCCCTGACATGAAGTGTTCCCTTGTATGGGATGCTGGAGAGAATTCCTCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GTTGGCAAACTCCTGCAGCTCGGCGTTGTCCCCTTCAACTTTCTCCAACTCGTTCTTGGGTCTTTTTCTTaGAGGAGGAAAGCTCTAGAA +
Preference number: 5 (lower is better)
Translates to: VGKLLQLGVVPFNFLQLVLGSFS*RRKALE
Trigger: TTCTAGAGCTTTCCTCCTCAAAGAAAAAGACCCAAG...AACGAGTTGGAGAAAGTTGAAGGGGACAACGCCGAGCTGCAGGAGTTTGCCAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 90 bp CATAGTTGTCAGCCATTAATTTCATTCGATTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGTCCTTTTCCCGTTTCAGTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: HSCQPLISFDFVSAV*AAAPGGPFPVSVQP
Trigger: TGGCTGCACTGAAACGGGAAAAGGACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAATCGAATGAAATTAATGGCTGACAACTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 90 bp TACAGTAGATGCCATACTAACAGGAGGGAGGTGATGTTCTCCAAATaGTATGGTATCACTAGCAACCCCACTGCTTGCTATGTTGGGGCT +
Preference number: 5 (lower is better)
Translates to: YSRCHTNRREVMFSK*YGITSNPTACYVGA
Trigger: AGCCCCAACATAGCAAGCAGTGGGGTTGCTAGTGATACCATAGCATTTGGAGAACATCACCTCCCTCCTGTTAGTATGGCATCTACTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 90 bp CCTGGAAATCTCTCTCTCCAATTGCTGTATTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAATGTTGCTTCATGCGCCTTTTTCAA +
Preference number: 5 (lower is better)
Translates to: PGNLSLQLLYSVTHL*TGSGFQCCFMRLFQ
Trigger: TTGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCAATTGGAGAGAGAGATTTCCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp CTGTGCTTCAGTCACATAGGAGGGTGTGGTGCCAAGCCAGTCCCAGTGTTAATAACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LCFSHIGGCGAKPVPVLITVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...TATTAACACTGGGACTGGCTTGGCACCACACCCTCCTATGTGACTGAAGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
CDS-3UTR CAA 90 bp TTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGACTGTATATTCTCCATaGAAAGGGTTTTCCCACTGC +
Preference number: 5 (lower is better)
Translates to: LSRQHSKQKAEYDDRHRRTVYSP*KGFSHC
Trigger: GCAGTGGGAAAACCCTTTCAATGGAGAATATACAGT...CCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAA +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTPTAAI*LKQLIQ
Trigger: TTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGG...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCATCTCCAGAAGCTTCTaGATGGACTCATCCCGAGCA +
Preference number: 5 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIISRSF*MDSSRA
Trigger: TGCTCGGGATGAGTCCATCAAGAAGCTTCTGGAGAT...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GGGATAAGACAGCCTTTACGATCCATGGTAGAAGGAACCAATCACAAGTCCATCCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: GIRQPLRSMVEGTNHKSIQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...GATGGACTTGTGATTGGTTCCTTCTACCATGGATCGTAAAGGCTGTCTTATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp ATCACATACTCTAGCAACCCCTGGTCAACAGCAGCTTGGGGCAAGGTGTTGGGACCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: ITYSSNPWSTAAWGKVLGPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...TCCCAACACCTTGCCCCAAGCTGCTGTTGACCAGGGGTTGCTAGAGTATGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAAGAGACTGTCCTGCAGTaGCTGAGAGCTGTCGCTGAG +
Preference number: 5 (lower is better)
Translates to: ERDLWATLNSFESVNWAEETVLQ*LRAVAE
Trigger: CTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTC...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GGCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: GSSSWRPGRLEQATFKAESQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...TTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS GCA 90 bp GATGGTGTTATCTCTTGCCTGACGAAGAGAGTGAGGTACAGTAGATaGCATACTAACAGGAGGGAGGTGATGTTCTCCAAATGCTATGGT +
Preference number: 5 (lower is better)
Translates to: DGVISCLTKRVRYSR*HTNRREVMFSKCYG
Trigger: ACCATAGCATTTGGAGAACATCACCTCCCTCCTGTTAGTATGGCATCTACTGTACCTCACTCTCTTCGTCAGGCAAGAGATAACACCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 90 bp TACTTCCTTCAGCTGTGTCTGCAGATCCATGATGGTGTTATCTCTTaGCTGACGAAGAGAGTGAGGTACAGTAGATGCCATACTAACAGG +
Preference number: 5 (lower is better)
Translates to: YFLQLCLQIHDGVIS*LTKRVRYSRCHTNR
Trigger: CCTGTTAGTATGGCATCTACTGTACCTCACTCTCTTCGTCAGGCAAGAGATAACACCATCATGGATCTGCAGACACAGCTGAAGGAAGTA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 90 bp AAATCTCTCTCTCCAATTGCTGTATTCGGTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTGCTTCATGCGCCTTTTTCAACTGTG +
Preference number: 5 (lower is better)
Translates to: KSLSPIAVFGHSSLD*LWLPMLLHAPFSTV
Trigger: CACAGTTGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCAATTGGAGAGAGAGATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 90 bp GACGGTCAACTTCTGTTTGGGCCTTGCTGGATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATTGCTGTATTCGGTCACTCATCTCTG +
Preference number: 5 (lower is better)
Translates to: DGQLLFGPCWIHLCT*KSLSPIAVFGHSSL
Trigger: CAGAGATGAGTGACCGAATACAGCAATTGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: RGLGHGRGLSGVQYTTLTGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...AGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp TGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATCCGACCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: CHDSTEHISQGFHTIPIRPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...TCGGATAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTGAGCAGGCAACATTCAAAGCAGAAGGCAGAGTACGATGACAGACACCGACGGCCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: LSRQHSKQKAEYDDRHRRPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...CCGTCGGTGTCTGTCATCGTACTCTGCCTTCTGCTTTGAATGTTGCCTGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp CTCCTGTCAACTAAAAGCAGTGCAGGTGAGACAGGCAACAGGCTGAGAGCTAAGCCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: LLSTKSSAGETGNRLRAKPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...CTTAGCTCTCAGCCTGTTGCCTGTCTCACCTGCACTGCTTTTAGTTGACAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AGAGCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RAIRVTTVNILLLSTKSSTSVWA*LDSSLY
Trigger: GTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGT...ACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AGGGGTCTCGGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTATTCTGGTCTTTCACTaGCCTTTCCAACTCAGCTAT +
Preference number: 5 (lower is better)
Translates to: RGLGHGRGLSGVQYTTLTILVFH*PFQLSY
Trigger: ATAGCTGAGTTGGAAAGGCAAGTGAAAGACCAGAAT...AGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACCGAGACCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184320.8
CDS-3UTR CAA 90 bp TTTCAGGGTAGTAACACTGACAGCAAAGATCCTGACCTACCACATGGGACCTTCGGGCTCCAGAAGGTCTaGATACTATTCATTGATGAA +
Preference number: 5 (lower is better)
Translates to: FQGSNTDSKDPDLPHGTFGLQKV*ILFIDE
Trigger: TTCATCAATGAATAGTATCAAGACCTTCTGGAGCCC...GAAGGTCCCATGTGGTAGGTCAGGATCTTTGCTGTCAGTGTTACTACCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTGAATACACAGGAGAGAGGATTGACAGAGAAGAAATGCTGTTTACCAGACCATGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: AEYTGERIDREEMLFTRPCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...TGGTCTGGTAAACAGCATTTCTTCTCTGTCAATCCTCTCTCCTGTGTATTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp GGTCATGGCAGAGGGCTGTCAGGTGTCCAATATACAACTTTAACTTGCTTCTATTGCAAGGCTTTTGTCTaGGCAGAATCAGGGGCATTT +
Preference number: 5 (lower is better)
Translates to: GHGRGLSGVQYTTLTCFYCKAFV*AESGAF
Trigger: AAATGCCCCTGATTCTGCCAAGACAAAAGCCTTGCA...ATAGAAGCAAGTTAAAGTTGTATATTGGACACCTGACAGCCCTCTGCCATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GATCAATGGCTTGGATCCCAGGCTAACAGTAGCAAAGTGGAAGTGAGGCTTACCTACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: DQWLGSQANSSKVEVRLTYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...GGTAAGCCTCACTTCCACTTTGCTACTGTTAGCCTGGGATCCAAGCCATTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000079582.5
CDS-3UTR CAA 90 bp TTCACTGCCATGATTCAACTGAGCACATCTCACAGGGCTTCCACACCATCCCTATACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: FTAMIQLSTSHRASTPSLYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...TAGGGATGGTGTGGAAGCCCTGTGAGATGTGCTCAGTTGAATCATGGCAGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCAGTTCTTCATGGAGACCAGGGAGACTTGAGCAGGCAACATTCAAAGCAGAAGCCTTTAAGCGTTCAATaGTCCGTTCTTTATCTGCAA +
Preference number: 5 (lower is better)
Translates to: AVLHGDQGDLSRQHSKQKPLSVQ*SVLYLQ
Trigger: TTGCAGATAAAGAACGGACAATTGAACGCTTAAAGG...CTTCTGCTTTGAATGTTGCCTGCTCAAGTCTCCCTGGTCTCCATGAAGAACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTGACTCTTCCAGGGCATaGACCACTTGTTCGAGGATG +
Preference number: 5 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCDSSRA*TTCSRM
Trigger: CATCCTCGAACAAGTGGTCAATGCCCTGGAAGAGTC...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
CDS-3UTR CAA 90 bp CACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCCAGTCACTTCCCTCCTGTACTATTaGTTCGCCGATGACCTAAGC +
Preference number: 5 (lower is better)
Translates to: HSDFFILNVRKYLLIPVTSLLYY*FADDLS
Trigger: GCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGA...AGTGACTGGGATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GAGAGAGATTTGTGGGCAACATTAAATTCCTTTGAGAGTGTTAACTGGGCAGAATTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGA +
Preference number: 5 (lower is better)
Translates to: ERDLWATLNSFESVNWAELAESP*LWSISR
Trigger: TCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAA...TTCTGCCCAGTTAACACTCTCAAAGGAATTTAATGTTGCCCACAAATCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp GCTAAACCCCACTCTGACTTCTTCATCTTAAATGTCCGTAAGTACTTGCTAATCCAGTTTGCAAGGCTTTaGTCTTGGCAGAATCAGGGG +
Preference number: 5 (lower is better)
Translates to: AKPHSDFFILNVRKYLLIQFARL*SWQNQG
Trigger: CCCCTGATTCTGCCAAGACAAAAGCCTTGCAAACTG...GATTAGCAAGTACTTACGGACATTTAAGATGAAGAAGTCAGAGTGGGGTTTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp AGAGCGATCAGGGTGACCACTGTGAACATCCTTCTCCTGTCAACTAAAAGCAGTTACTCAAAGCCCCATTaGACTTCAGCATCTGAATTT +
Preference number: 5 (lower is better)
Translates to: RAIRVTTVNILLLSTKSSYSKPH*TSASEF
Trigger: AAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTA...ACTGCTTTTAGTTGACAGGAGAAGGATGTTCACAGTGGTCACCCTGATCGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS GCA 90 bp CTTTGCTCCTTAGCAGTGAGGGACTCTTTCAGCACCTCAATATGTTaGTTACTGTCTGAGAATTGGTTCGTGAGAGTTTCTAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: LCSLAVRDSFSTSIC*LLSENWFVRVSSFV
Trigger: AACAAAGCTAGAAACTCTCACGAACCAATTCTCAGACAGTAAGCAACATATTGAGGTGCTGAAAGAGTCCCTCACTGCTAAGGAGCAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CCA 90 bp CTTTCAAGATTTCCAAGAGACGGTCAACTTCTGTTTGGGCCTTGCTaGATTCATCTTTGTACCTGGAAATCTCTCTCTCCAATTGCTGTA +
Preference number: 5 (lower is better)
Translates to: LSRFPRDGQLLFGPC*IHLCTWKSLSPIAV
Trigger: TACAGCAATTGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCGTCTCTTGGAAATCTTGAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 90 bp TTTTCCACTTCTTTCAAGATTTCCAAGAGACGGTCAACTTCTGTTTaGGCCTTGCTGGATTCATCTTTGTACCTGGAAATCTCTCTCTCC +
Preference number: 5 (lower is better)
Translates to: FSTSFKISKRRSTSV*ALLDSSLYLEISLS
Trigger: GGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCGTCTCTTGGAAATCTTGAAAGAAGTGGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS-3UTR CAA 90 bp ATTAAGACAAACTCAGTTGTGCCAAAAGAAGTTTCTAGGCAGGTACAAGGCTGTAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: IKTNSVVPKEVSRQVQGCSQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...ACAGCCTTGTACCTGCCTAGAAACTTCTTTTGGCACAACTGAGTTTGTCTTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS-3UTR CAA 90 bp TTTAGTAACTATTGGCTTACTGAATGGCAGTCAGTAGGATCCCAATGCCAGATAAGCCAGAAGAGCTTCTaGCTTCATTTCCAGAACTTC +
Preference number: 5 (lower is better)
Translates to: FSNYWLTEWQSVGSQCQISQKSF*LHFQNF
Trigger: GAAGTTCTGGAAATGAAGCAAGAAGCTCTTCTGGCT...TATCTGGCATTGGGATCCTACTGACTGCCATTCAGTAAGCCAATAGTTACTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000185139.8
CDS TCA 90 bp TTCTCAAGGCCCGCTCTTTCTTTAACTCTGGGCTCCAGAAGGTCTTaGTACTATTCATTGATGAACTTAATTTGCTCTCCTTTACTTCCA +
Preference number: 5 (lower is better)
Translates to: FSRPALSLTLGSRRS*YYSLMNLICSPLLP
Trigger: TGGAAGTAAAGGAGAGCAAATTAAGTTCATCAATGAATAGTATCAAGACCTTCTGGAGCCCAGAGTTAAAGAAAGAGCGGGCCTTGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 72 bp GGGGACCGAGGAAGCCGAGGTGATCGCCCAGGACTCTaGCTGCTTGGTTCCACCTTCCCTACTGATCGAGCA +
Preference number: 6 (lower is better)
Translates to: GDRGSRGDRPGL*LLGSTFPTDRA
Trigger: TGCTCGATCAGTAGGGAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATCACCTCGGCTTCCTCGGTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp CGTGCTCAGCATGCAGCCTCTGGAAGTTCTCCTCTGTaGGCTCTGCCACGCAAGGCTCCCCAGTCCTACTGC +
Preference number: 6 (lower is better)
Translates to: RAQHAASGSSPL*ALPRKAPQSYC
Trigger: GCAGTAGGACTGGGGAGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCCAGAGGCTGCATGCTGAGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS TCA 72 bp TACGGAGACTGTCCTGCAGTTGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGCGGGCCTCCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: YGDCPAVAESCR*DCPPFCGPPPA
Trigger: TGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTCCGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp ACAGCTCTTCCACCTGCAGTTGCTGAGAGCTGTCGCTaGGACTGTCCTCCCTTCTGCGGGCCTCCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: TALPPAVAESCR*DCPPFCGPPPA
Trigger: TGCTGGAGGAGGCCCGCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGCAACTGCAGGTGGAAGAGCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
CDS GCA 72 bp ACCGAGGAAGCCGAGGTGATCGCCCAGGACTCTGGCTaGTTGGTTCCACCTTCCCTACTGATCGAGCACTTC +
Preference number: 6 (lower is better)
Translates to: TEEAEVIAQDSG*LVPPSLLIEHF
Trigger: GAAGTGCTCGATCAGTAGGGAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATCACCTCGGCTTCCTCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp AAGACTCTCGAGGTGGTGGACGTGCATCTCCGCCTCTaGGAGCCGTCGCGTTCTCTCATGGTCTTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: KTLEVVDVHLRL*EPSRSLMVFLC
Trigger: ACAGAGGAAGACCATGAGAGAACGCGACGGCTCGCAGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS GCA 72 bp TCCTTCTGCTCCAAAAGACTCTCGAGGTGGTGGACGTaGATCTCCGCCTCTGCGAGCCGTCGCGTTCTCTCA +
Preference number: 6 (lower is better)
Translates to: SFCSKRLSRWWT*ISASASRRVLS
Trigger: TGAGAGAACGCGACGGCTCGCAGAGGCGGAGATGCACGTCCACCACCTCGAGAGTCTTTTGGAGCAGAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS GCA 72 bp AGCATGCAGCCTCTGGAAGTTCTCCTCTGTGAGCTCTaGCACGCAAGGCTCCCCAGTCCTACTGCTGCTATC +
Preference number: 6 (lower is better)
Translates to: SMQPLEVLLCEL*HARLPSPTAAI
Trigger: GATAGCAGCAGTAGGACTGGGGAGCCTTGCGTGGCAGAGCTCACAGAGGAGAACTTCCAGAGGCTGCATGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CAA 72 bp GAGGAAGCCGAGGTGATCGCCCAGGACTCTGGCTGCTaGGTTCCACCTTCCCTACTGATCGAGCACTTCCAT +
Preference number: 6 (lower is better)
Translates to: EEAEVIAQDSGC*VPPSLLIEHFH
Trigger: ATGGAAGTGCTCGATCAGTAGGGAAGGTGGAACCAAGCAGCCAGAGTCCTGGGCGATCACCTCGGCTTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp CTGTCATCCTTCTTACGGAGACTGTCCTGCAGTTGCTaGGAGCTGTCGCTGAGACTGTCCTCCCTTCTGCGG +
Preference number: 6 (lower is better)
Translates to: LSSFLRRLSCSC*ELSLRLSSLLR
Trigger: CCGCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGCAACTGCAGGACAGTCTCCGTAAGAAGGATGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp TCCATAGCCATCAACAGCTCTTCCACCTGCAGTTGCTaGGAGCTGTCGCTGAGACTGTCCTCCCTTCTGCGG +
Preference number: 6 (lower is better)
Translates to: SIAINSSSTCSC*ELSLRLSSLLR
Trigger: CCGCAGAAGGGAGGACAGTCTCAGCGACAGCTCTCAGCAACTGCAGGTGGAAGAGCTGTTGATGGCTATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000183880.8
ENSMUST00000184838.8
CDS CAA 90 bp TGTGAGCTCTGCCACGCAAGGCTCCCCAGTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAAGTCCCTCTGGATCCGCAGCTCATC +
Preference number: 6 (lower is better)
Translates to: CELCHARLPSPTAAI*LKQLIQVPLDPQLI
Trigger: GATGAGCTGCGGATCCAGAGGGACTTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGGAGCCTTGCGTGGCAGAGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CCA 72 bp TTTCCTCCAGGGTCTTCCGCAGAAGAAACAGCTCTTTaGCTTGCCTCTCGTGCTCAGCATGCAGCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: FPPGSSAEETAL*LASRAQHAASG
Trigger: TCCAGAGGCTGCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCTGCGGAAGACCCTGGAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CCA 72 bp TGCATCTCCGCCTCTGCGAGCCGTCGCGTTCTCTCATaGTCTTCCTCTGTAGCTTTGGCAGAAAGTCCTTTG +
Preference number: 6 (lower is better)
Translates to: CISASASRRVLS*SSSVALAESPL
Trigger: CAAAGGACTTTCTGCCAAAGCTACAGAGGAAGACCATGAGAGAACGCGACGGCTCGCAGAGGCGGAGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CAA 72 bp TGCCACGCAAGGCTCCCCAGTCCTACTGCTGCTATCTaGCTGAAACAGCTGATTCAAGTCCCTCTGGATCCG +
Preference number: 6 (lower is better)
Translates to: CHARLPSPTAAI*LKQLIQVPLDP
Trigger: CGGATCCAGAGGGACTTGAATCAGCTGTTTCAGCAAGATAGCAGCAGTAGGACTGGGGAGCCTTGCGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CAA 72 bp CTCCAGGGTCTTCCGCAGAAGAAACAGCTCTTTGGCTaGCCTCTCGTGCTCAGCATGCAGCCTCTGGAAGTT +
Preference number: 6 (lower is better)
Translates to: LQGLPQKKQLFG*PLVLSMQPLEV
Trigger: AACTTCCAGAGGCTGCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCTGCGGAAGACCCTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CAA 72 bp ATTTCCTCCAGGGTCTTCCGCAGAAGAAACAGCTCTTaGGCTTGCCTCTCGTGCTCAGCATGCAGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: ISSRVFRRRNSS*ACLSCSACSLW
Trigger: CCAGAGGCTGCATGCTGAGCACGAGAGGCAAGCCAAAGAGCTGTTTCTTCTGCGGAAGACCCTGGAGGAAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS TCA 72 bp TTTCCAGAACTCCCTCCTGTACTATTTGTTCGCCGATaGCCTAAGCGAGGGGACCGAGGAAGCCGAGGTGAT +
Preference number: 6 (lower is better)
Translates to: FPELPPVLFVRR*PKRGDRGSRGD
Trigger: ATCACCTCGGCTTCCTCGGTCCCCTCGCTTAGGTCATCGGCGAACAAATAGTACAGGAGGGAGTTCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp CAGCTCTTCCACCTGTTTCTCAGCATTGGTCCTGGCTaGTTCCTCTTGTGCCAGCACCATTTCACGCTCTGC +
Preference number: 6 (lower is better)
Translates to: QLFHLFLSIGPG*FLLCQHHFTLC
Trigger: GCAGAGCGTGAAATGGTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGTGGAAGAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 72 bp TCCAGCATGTCCTTGAGGTCATGGATCTCTCCAGCCTaGGTGCCCTTCTCCTCAGCCATATCTTGGATTTGC +
Preference number: 6 (lower is better)
Translates to: SSMSLRSWISPA*VPFSSAISWIC
Trigger: GCAAATCCAAGATATGGCTGAGGAGAAGGGCACCCAGGCTGGAGAGATCCATGACCTCAAGGACATGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp TCCTCATCCTGGTCTGGGGAGGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTGAAGTGGTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: SSSWSGEGLWFV*LEREDLKWSSS
Trigger: TGAGGATGACCACTTCAGATCCTCCCGTTCCAATCAGACGAACCATAAACCCTCCCCAGACCAGGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000183880.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp GTTGTCAGAGCTGTGTCTGTGTTAGTGGTGTCCGCCTaGAGAGACTTGACTCGCTCTTTCAAGCTGCTCATC +
Preference number: 6 (lower is better)
Translates to: VVRAVSVLVVSA*RDLTRSFKLLI
Trigger: GATGAGCAGCTTGAAAGAGCGAGTCAAGTCTCTGCAGGCGGACACCACTAACACAGACACAGCTCTGACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp GCTATGGTATCACTAGCAACCCCACTGCTTGCTATGTaGGGGCTACTGCCCATAGCAGTCATCCTAACACCG +
Preference number: 6 (lower is better)
Translates to: AMVSLATPLLAM*GLLPIAVILTP
Trigger: CGGTGTTAGGATGACTGCTATGGGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCTAGTGATACCATAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp CGCGTTCTCTCATGGTCTTCCTCTGTAGCTTTGGCAGAAAGTCCTTaGCTCTGGAGCATCTCCAGAAGCTTCTTGATGGACTCATCCCGA +
Preference number: 6 (lower is better)
Translates to: RVLSWSSSVALAESP*LWSISRSFLMDSSR
Trigger: TCGGGATGAGTCCATCAAGAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGACCATGAGAGAACGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS TCA 72 bp CTCTTCCTCCCGCTCCTCACTACTCAAAGCCCCATTTaGCTTCAGCATCTGAATTTCCTCTTCCAGGTCTCG +
Preference number: 6 (lower is better)
Translates to: LFLPLLTTQSPI*LQHLNFLFQVS
Trigger: CGAGACCTGGAAGAGGAAATTCAGATGCTGAAGTCAAATGGGGCTTTGAGTAGTGAGGAGCGGGAGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS TCA 72 bp TGGATGATCTGGTCTGGGGAGGGTTTATGGTTCGTCTaGTTGGAACGGGAGGATCTGAAGTGGTCATCCTCA +
Preference number: 6 (lower is better)
Translates to: WMIWSGEGLWFV*LEREDLKWSSS
Trigger: TGAGGATGACCACTTCAGATCCTCCCGTTCCAATCAGACGAACCATAAACCCTCCCCAGACCAGATCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8
CDS GCA 72 bp ATCTCCTCCTGCTTCTCCCGCTCATCCCTGTCCCGCTaGTCCTTTAAGCGTTCAATTGTCCGTTCTTTATCT +
Preference number: 6 (lower is better)
Translates to: ISSCFSRSSLSR*SFKRSIVRSLS
Trigger: AGATAAAGAACGGACAATTGAACGCTTAAAGGAGCAGCGGGACAGGGATGAGCGGGAGAAGCAGGAGGAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 72 bp CTCTCTCTCCAATTGCTGTATTCGGTCACTCATCTCTaGACTGGCTCTGGCTTCCAATGTTGCTTCATGCGC +
Preference number: 6 (lower is better)
Translates to: LSLQLLYSVTHL*TGSGFQCCFMR
Trigger: GCGCATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCAATTGGAGAGAGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp GCTGTGTCTGTGTTAGTGGTGTCCGCCTGCAGAGACTaGACTCGCTCTTTCAAGCTGCTCATCTGCTTTTCT +
Preference number: 6 (lower is better)
Translates to: AVSVLVVSACRD*TRSFKLLICFS
Trigger: AGAAAAGCAGATGAGCAGCTTGAAAGAGCGAGTCAAGTCTCTGCAGGCGGACACCACTAACACAGACACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp TCCAAATGCTATGGTATCACTAGCAACCCCACTGCTTaGTATGTTGGGGCTACTGCCCATAGCAGTCATCCT +
Preference number: 6 (lower is better)
Translates to: SKCYGITSNPTA*YVGATAHSSHP
Trigger: AGGATGACTGCTATGGGCAGTAGCCCCAACATAGCAAGCAGTGGGGTTGCTAGTGATACCATAGCATTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp TCTTCCTTCTTCTGCTCAAGAGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTGAGTCCTGAGGAAGCC +
Preference number: 6 (lower is better)
Translates to: SSFFCSRAISRV*SRESFLSPEEA
Trigger: GGCTTCCTCAGGACTCAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp ATAGCCATCAACAGCTCTTCCACCTGTTTCTCAGCATaGGTCCTGGCTGATTCCTCTTGTGCCAGCACCATT +
Preference number: 6 (lower is better)
Translates to: IAINSSSTCFSA*VLADSSCASTI
Trigger: AATGGTGCTGGCACAAGAGGAATCAGCCAGGACCAATGCTGAGAAACAGGTGGAAGAGCTGTTGATGGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp TTCTGCTCAAGAGCAATTTCTAGGGTCTTGAGCCGCGAGTCCTTTTaGAGTCCTGAGGAAGCCAGGGAAGAAGCATGCTCTTTGATATCC +
Preference number: 6 (lower is better)
Translates to: FCSRAISRVLSRESF*SPEEAREEACSLIS
Trigger: GGATATCAAAGAGCATGCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGCTCTTGAGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp TTTAGGCACTCTTCCTTCTTCTGCTCAAGAGCAATTTCTAGGGTCTaGAGCCGCGAGTCCTTTTTGAGTCCTGAGGAAGCCAGGGAAGAA +
Preference number: 6 (lower is better)
Translates to: FRHSSFFCSRAISRV*SRESFLSPEEAREE
Trigger: TTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGACTCGCGGCTCAAGACCCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTGCCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp CCTCCTGTACAACTCGGTACTGCTCCTTCCAAATGGTaGTTTTGGAAGCTTCATCTTTTCTCAAGGCCCGCT +
Preference number: 6 (lower is better)
Translates to: PPVQLGTAPSKW*FWKLHLFSRPA
Trigger: AGCGGGCCTTGAGAAAAGATGAAGCTTCCAAAATCACCATTTGGAAGGAGCAGTACCGAGTTGTACAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp CAGCTGTGTCTGCAGATCCATGATGGTGTTATCTCTTaGCTGACGAAGAGAGTGAGGTACAGTAGATGCCAT +
Preference number: 6 (lower is better)
Translates to: QLCLQIHDGVIS*LTKRVRYSRCH
Trigger: ATGGCATCTACTGTACCTCACTCTCTTCGTCAGGCAAGAGATAACACCATCATGGATCTGCAGACACAGCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 72 bp TCTTCCTCTGTAGCTTTGGCAGAAAGTCCTTTGCTCTaGAGCATCTCCAGAAGCTTCTTGATGGACTCATCC +
Preference number: 6 (lower is better)
Translates to: SSSVALAESPLL*SISRSFLMDSS
Trigger: GGATGAGTCCATCAAGAAGCTTCTGGAGATGCTCCAGAGCAAAGGACTTTCTGCCAAAGCTACAGAGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CCA 72 bp TCTCCAATTGCTGTATTCGGTCACTCATCTCTGGACTaGCTCTGGCTTCCAATGTTGCTTCATGCGCCTTTT +
Preference number: 6 (lower is better)
Translates to: SPIAVFGHSSLD*LWLPMLLHAPF
Trigger: AAAAGGCGCATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGCAATTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp TTGAGTCCTGAGGAAGCCAGGGAAGAAGCATGCTCTTaGATATCCAAGAGAGAAGCCTCCTTTTCTGAGAGG +
Preference number: 6 (lower is better)
Translates to: LSPEEAREEACS*ISKREASFSER
Trigger: CCTCTCAGAAAAGGAGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTTCCCTGGCTTCCTCAGGACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp GGTCACTCATCTCTGGACTGGCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCAACTGTGACTCCATTT +
Preference number: 6 (lower is better)
Translates to: GHSSLDWLWLPM*LHAPFSTVTPF
Trigger: AAATGGAGTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp GTTGTCAGAGCTGTGTCTGTGTTAGTGGTGTCCGCCTGCAGAGACTaGACTCGCTCTTTCAAGCTGCTCATCTGCTTTTCTTTATCTCTT +
Preference number: 6 (lower is better)
Translates to: VVRAVSVLVVSACRD*TRSFKLLICFSLSL
Trigger: AAGAGATAAAGAAAAGCAGATGAGCAGCTTGAAAGAGCGAGTCAAGTCTCTGCAGGCGGACACCACTAACACAGACACAGCTCTGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp GAGTCCTTTTTGAGTCCTGAGGAAGCCAGGGAAGAAGCATGCTCTTaGATATCCAAGAGAGAAGCCTCCTTTTCTGAGAGGTCTCCTTGT +
Preference number: 6 (lower is better)
Translates to: ESFLSPEEAREEACS*ISKREASFSERSPC
Trigger: ACAAGGAGACCTCTCAGAAAAGGAGGCTTCTCTCTTGGATATCAAAGAGCATGCTTCTTCCCTGGCTTCCTCAGGACTCAAAAAGGACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp GCTGTATTCGGTCACTCATCTCTGGACTGGCTCTGGCTTCCAATGTaGCTTCATGCGCCTTTTTCAACTGTGACTCCATTTTTAGGCACT +
Preference number: 6 (lower is better)
Translates to: AVFGHSSLDWLWLPM*LHAPFSTVTPFLGT
Trigger: AGTGCCTAAAAATGGAGTCACAGTTGAAAAAGGCGCATGAAGCAACATTGGAAGCCAGAGCCAGTCCAGAGATGAGTGACCGAATACAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp TCCAAGAGACGGTCAACTTCTGTTTGGGCCTTGCTGGATTCATCTTaGTACCTGGAAATCTCTCTCTCCAATTGCTGTATTCGGTCACTC +
Preference number: 6 (lower is better)
Translates to: SKRRSTSVWALLDSS*YLEISLSNCCIRSL
Trigger: GAGTGACCGAATACAGCAATTGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCGTCTCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp CAGCCATTAATTTCATTCGATTTTGTGTCTGCTGTTTaGGCTGCTGCACCAGGCGGTCCTTTTCCCGTTTCA +
Preference number: 6 (lower is better)
Translates to: QPLISFDFVSAV*AAAPGGPFPVS
Trigger: TGAAACGGGAAAAGGACCGCCTGGTGCAGCAGCTCAAACAGCAGACACAAAATCGAATGAAATTAATGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp AACTGTGACTCCATTTTTAGGCACTCTTCCTTCTTCTaGTCAAGAGCAATTTCTAGGGTCTTGAGCCGCGAG +
Preference number: 6 (lower is better)
Translates to: NCDSIFRHSSFF*SRAISRVLSRE
Trigger: CTCGCGGCTCAAGACCCTAGAAATTGCTCTTGAGCAGAAGAAGGAAGAGTGCCTAAAAATGGAGTCACAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp GCATCCACCTGGTTTTCCTCCTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATTTTGGAAGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: ASTWFSSCTTRY*SFQMVILEASS
Trigger: AGATGAAGCTTCCAAAATCACCATTTGGAAGGAGCAGTACCGAGTTGTACAGGAGGAAAACCAGGTGGATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000185143.2
CDS TCA 72 bp CTCTTAATACTTCCTTCAGCTGTGTCTGCAGATCCATaGTGGTGTTATCTCTTGCCTGACGAAGAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: LLILPSAVSADP*WCYLLPDEESE
Trigger: CTCACTCTCTTCGTCAGGCAAGAGATAACACCATCATGGATCTGCAGACACAGCTGAAGGAAGTATTAAGAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS GCA 72 bp TGCATGTGCTGGTTTTCCTCCTGTACAACTCGGTACTaGTCCTTCCAAATGGTGATTTTGGAAGCTTCATCT +
Preference number: 6 (lower is better)
Translates to: CMCWFSSCTTRY*SFQMVILEASS
Trigger: AGATGAAGCTTCCAAAATCACCATTTGGAAGGAGCAGTACCGAGTTGTACAGGAGGAAAACCAGCACATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
CDS CCA 72 bp CTTCTGTTTGGGCCTTGCTGGATTCATCTTTGTACCTaGAAATCTCTCTCTCCAATTGCTGTATTCGGTCAC +
Preference number: 6 (lower is better)
Translates to: LLFGPCWIHLCT*KSLSPIAVFGH
Trigger: GTGACCGAATACAGCAATTGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 72 bp TTTCCAAGAGACGGTCAACTTCTGTTTGGGCCTTGCTaGATTCATCTTTGTACCTGGAAATCTCTCTCTCCA +
Preference number: 6 (lower is better)
Translates to: FPRDGQLLFGPC*IHLCTWKSLSP
Trigger: TGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCGTCTCTTGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp AGGGTTTATGGTTCGTCTGATTGGAACGGGAGGATCTaGAGTGGTCATCCTCATAGTTGTCAGCCATTAATT +
Preference number: 6 (lower is better)
Translates to: RVYGSSDWNGRI*SGHPHSCQPLI
Trigger: AATTAATGGCTGACAACTATGAGGATGACCACTTCAGATCCTCCCGTTCCAATCAGACGAACCATAAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 72 bp CGGTCAACTTCTGTTTGGGCCTTGCTGGATTCATCTTaGTACCTGGAAATCTCTCTCTCCAATTGCTGTATT +
Preference number: 6 (lower is better)
Translates to: RSTSVWALLDSS*YLEISLSNCCI
Trigger: AATACAGCAATTGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CAA 90 bp ACTTCTTTCAAGATTTCCAAGAGACGGTCAACTTCTGTTTGGGCCTaGCTGGATTCATCTTTGTACCTGGAAATCTCTCTCTCCAATTGC +
Preference number: 6 (lower is better)
Translates to: TSFKISKRRSTSVWA*LDSSLYLEISLSNC
Trigger: GCAATTGGAGAGAGAGATTTCCAGGTACAAAGATGAATCCAGCAAGGCCCAAACAGAAGTTGACCGTCTCTTGGAAATCTTGAAAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184320.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS TCA 72 bp CCCGCTCTTTCTTTAACTCTGGGCTCCAGAAGGTCTTaGTACTATTCATTGATGAACTTAATTTGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: PALSLTLGSRRS*YYSLMNLICSP
Trigger: AGGAGAGCAAATTAAGTTCATCAATGAATAGTATCAAGACCTTCTGGAGCCCAGAGTTAAAGAAAGAGCGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000032279.12
ENSMUST00000079582.5
ENSMUST00000183703.8
ENSMUST00000183880.8
ENSMUST00000183911.8
ENSMUST00000184838.8
ENSMUST00000184864.8
ENSMUST00000185139.8
ENSMUST00000185143.2
CDS CCA 72 bp AGGTGTCCAATATACAACTTTAACTTGCTTCTATTTTaGTCAAGTTCTAAGAGGGGCTGGATGATCTGGTCT +
Preference number: 6 (lower is better)
Translates to: RCPIYNFNLLLF*SSSKRGWMIWS
Trigger: AGACCAGATCATCCAGCCCCTCTTAGAACTTGACCAAAATAGAAGCAAGTTAAAGTTGTATATTGGACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000032279.12
ENSMUST00000183703.8
ENSMUST00000183911.8
ENSMUST00000184864.8