RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERBIN (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021709

Ensembl transcript IDs: ENSMUST00000022222.12, ENSMUST00000053927.12, ENSMUST00000091269.11, ENSMUST00000169083.8, ENSMUST00000188997.7, ENSMUST00000191275.7

Found 601 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATaGACACTCACATTTCCTCTCACTTTACCAAGGCAACACCAGGCC +
Preference number: 1 (lower is better)
Translates to: IAVPVSQTCFGFLAP*TLTFPLTLPRQHQA
Trigger: GGCCTGGTGTTGCCTTGGTAAAGTGAGAGGAAATGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR CAA 90 bp GCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTaGCTTTGGTTTCCTAGCTCCATGCACACTCACATTTCCTCTCAC +
Preference number: 2 (lower is better)
Translates to: ALSAALPHRCASLTD*LWFPSSMHTHISSH
Trigger: GTGAGAGGAAATGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR TCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTAGGACACAAAAGCTATaGGATAGACAGCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: SALSAALPHRCASLTDLLRTQKL*DRQLCH
Trigger: ATGGCAGAGCTGTCTATCTCATAGCTTTTGTGTCCT...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTCTGGCCTTGAAAAGTaGACCCACCAGCATCAACTT +
Preference number: 2 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHSGLEK*THQHQL
Trigger: AAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGCTTTAATCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHALIWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTTCAAGGCCAGATTAAAGC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCAGGACACAAAAGCTATaGGATAGACAGCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCRTQKL*DRQLCH
Trigger: ATGGCAGAGCTGTCTATCTCATAGCTTTTGTGTCCT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTCATCTTCTGTACAGTaGTTCTTCCCTCTAACCACA +
Preference number: 2 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHSSSVQ*FFPLTT
Trigger: TGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATCAAGGCTAACTATTaGCTTGCATACAGTCAGTCA +
Preference number: 2 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHIKANY*LAYSQS
Trigger: TGACTGACTGTATGCAAGGCAATAGTTAGCCTTGAT...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR GCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAATCAAGGCTAACTATTaGCTTGCATACAGTCAGTCA +
Preference number: 2 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTIKANY*LAYSQS
Trigger: TGACTGACTGTATGCAAGGCAATAGTTAGCCTTGAT...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR GCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGCCAGTCTCACAGACTTaGTTTGGTTTCCTAGCTCCA +
Preference number: 2 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKPVSQT*FGFLAP
Trigger: TGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGG...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATCATCTTCTGTACAGTaGTTCTTCCCTCTAACCACA +
Preference number: 2 (lower is better)
Translates to: SEPTSINFIYPLLSMHIASSSVQ*FFPLTT
Trigger: TGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTCATCTTCTGTACAGTaGTTCTTCCCTCTAACCACA +
Preference number: 2 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSSSVQ*FFPLTT
Trigger: TGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGAGGACACAAAAGCTATaGGATAGACAGCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRRTQKL*DRQLCH
Trigger: ATGGCAGAGCTGTCTATCTCATAGCTTTTGTGTCCT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR TCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAGCTTTAATCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKALIWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTTCAAGGCCAGATTAAAGC...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTATCAAGGCTAACTATTaGCTTGCATACAGTCAGTCA +
Preference number: 2 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPIKANY*LAYSQS
Trigger: TGACTGACTGTATGCAAGGCAATAGTTAGCCTTGAT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAACAGGAATACCAGTTaGATAAAAGTAAGGACACAA +
Preference number: 2 (lower is better)
Translates to: NLALKSEPTSINFIYPLLNRNTS*IKVRTQ
Trigger: TTGTGTCCTTACTTTTATCCAACTGGTATTCCTGTT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR TCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAAGGACACAAAAGCTATaGGATAGACAGCTCTGCCAT +
Preference number: 2 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKRTQKL*DRQLCH
Trigger: ATGGCAGAGCTGTCTATCTCATAGCTTTTGTGTCCT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR TCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGGCTTTAATCTGGCCTTaGAAAGTGAACCCACCAGCA +
Preference number: 2 (lower is better)
Translates to: NSHALLLTTACYPNFIIQALIWP*KVNPPA
Trigger: TGCTGGTGGGTTCACTTTTCAAGGCCAGATTAAAGC...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGAACAGGAATACCAGTTaGATAAAAGTAAGGACACAA +
Preference number: 2 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKNRNTS*IKVRTQ
Trigger: TTGTGTCCTTACTTTTATCCAACTGGTATTCCTGTT...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR CAA 90 bp ACTTCTATCATCAATACTTGTTACAGTAACAAGGAACAAAGGCAATaGGTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTA +
Preference number: 2 (lower is better)
Translates to: TSIINTCYSNKEQRQ*VVKRYHTGPFRNPL
Trigger: TAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCACCAATTGCCTTTGTTCCTTGTTACTGTAACAAGTATTGATGATAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAATCAAGGCTAACTATTaGCTTGCATACAGTCAGTCA +
Preference number: 2 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKIKANY*LAYSQS
Trigger: TGACTGACTGTATGCAAGGCAATAGTTAGCCTTGAT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCATCTTCTGTACAGTaGTTCTTCCCTCTAACCACA +
Preference number: 2 (lower is better)
Translates to: EFTLNVICRTALYLNTLHSSSVQ*FFPLTT
Trigger: TGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGA...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGTCATCTTCTGTACAGTaGTTCTTCCCTCTAACCACA +
Preference number: 2 (lower is better)
Translates to: NSHALLLTTACYPNFIIQSSSVQ*FFPLTT
Trigger: TGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGA...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAAGTATGAGAAATGCGTaGACATGCATCTACATTAGA +
Preference number: 2 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLSMRNA*TCIYIR
Trigger: TCTAATGTAGATGCATGTCCACGCATTTCTCATACT...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAAACAGGAATACCAGTTaGATAAAAGTAAGGACACAA +
Preference number: 2 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLNRNTS*IKVRTQ
Trigger: TTGTGTCCTTACTTTTATCCAACTGGTATTCCTGTT...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAACAGGAATACCAGTTaGATAAAAGTAAGGACACAA +
Preference number: 2 (lower is better)
Translates to: NSHALLLTTACYPNFIIQNRNTS*IKVRTQ
Trigger: TTGTGTCCTTACTTTTATCCAACTGGTATTCCTGTT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR GCA 72 bp CAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTaGTTTGGTTTCCTAGCTCCATGCACACTCACATTT +
Preference number: 3 (lower is better)
Translates to: QHFPIAVPVSQT*FGFLAPCTLTF
Trigger: AAATGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR CCA 72 bp CTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTaGTTTCCTAGCTCCATGCACACTCACATTTCCTCT +
Preference number: 3 (lower is better)
Translates to: LPHRCASLTDLL*FPSSMHTHISS
Trigger: AGAGGAAATGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCAAACCTTCTGACATTTaGTATTATGGGCGACACACA +
Preference number: 3 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCKPSDI*YYGRHT
Trigger: TGTGTGTCGCCCATAATACAAAATGTCAGAAGGTTT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAAACAGGAATACCAGTaGGATAAAAGTAAGGACACA +
Preference number: 3 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHKQEYQ*DKSKDT
Trigger: TGTGTCCTTACTTTTATCCAACTGGTATTCCTGTTT...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CAA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGAGGCTAACTATTGCCTaGCATACAGTCAGTCATGTG +
Preference number: 3 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKRLTIA*HTVSHV
Trigger: CACATGACTGACTGTATGCAAGGCAATAGTTAGCCT...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAAGGCTAACTATTGCCTaGCATACAGTCAGTCATGTG +
Preference number: 3 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKRLTIA*HTVSHV
Trigger: CACATGACTGACTGTATGCAAGGCAATAGTTAGCCT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CAA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAAGGCTAACTATTGCCTaGCATACAGTCAGTCATGTG +
Preference number: 3 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLRLTIA*HTVSHV
Trigger: CACATGACTGACTGTATGCAAGGCAATAGTTAGCCT...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAAAACAGGAATACCAGTaGGATAAAAGTAAGGACACA +
Preference number: 3 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKKQEYQ*DKSKDT
Trigger: TGTGTCCTTACTTTTATCCAACTGGTATTCCTGTTT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAAACCTTCTGACATTTaGTATTATGGGCGACACACA +
Preference number: 3 (lower is better)
Translates to: NSHALLLTTACYPNFIIQKPSDI*YYGRHT
Trigger: TGTGTGTCGCCCATAATACAAAATGTCAGAAGGTTT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGAGGGACGGGCACTCTaGGGCCTGGATGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHEGRAL*GLDVFG
Trigger: CCCAAATACATCCAGGCCTCAGAGTGCCCGTCCCTC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGAGGGACGGGCACTCTaGGGCCTGGATGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTEGRAL*GLDVFG
Trigger: CCCAAATACATCCAGGCCTCAGAGTGCCCGTCCCTC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAATGTGCCTGAGGCCTaGGAGGCTGGCCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHNVPEA*EAGPFV
Trigger: GACAAATGGGCCAGCCTCTCAGGCCTCAGGCACATT...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGCCCACATTTCTCCATaGCTGGCTGGGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHAHISP*LAGASL
Trigger: GAGACTTGCCCCAGCCAGGCATGGAGAAATGTGGGC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTCTAGAGGGATGCCTTaGCACAGATGCCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHSRGMP*HRCLRG
Trigger: CCCCCTCAGGCATCTGTGGCAAGGCATCCCTCTAGA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGAGGGACGGGCACTCTaGGGCCTGGATGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVEGRAL*GLDVFG
Trigger: CCCAAATACATCCAGGCCTCAGAGTGCCCGTCCCTC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTCATCATCATCAGGTCTaGAAGGGTTTCCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLHHHQV*KGFLCR
Trigger: GCGGCAGAGGAAACCCTTTCAGACCTGATGATGATG...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGTGAGGTGTAGACTGTaGGCCAGATACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCVRCRL*ARYCGS
Trigger: GCTGCCACAGTATCTGGCCCACAGTCTACACCTCAC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTNTCRG*SYSSVA
Trigger: TGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTT...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAGGGGGACCATACAGGTaGGGTGTAGACTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAGGPYR*GVDCGP
Trigger: TGGCCCACAGTCTACACCTCACCTGTATGGTCCCCC...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGTGACTAAGTGCACCTaGTGGGTGGTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHVTKCT*WVVLLF
Trigger: GAAGAGCAGAACCACCCATCAGGTGCACTTAGTCAC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTCCCTCCCTGGGTGGTaGCTCTCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHSLPGW*LSFIFV
Trigger: GACAAAGATGAAAGAGAGGCACCACCCAGGGAGGGA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGCCCACATTTCTCCATaGCTGGCTGGGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVAHISP*LAGASL
Trigger: GAGACTTGCCCCAGCCAGGCATGGAGAAATGTGGGC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCAGAACCTCTTCCGTCTaGAACACTCAGGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCRTSSV*NTQGKA
Trigger: AGCCTTGCCCTGAGTGTTGCAGACGGAAGAGGTTCT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCGTCAGCAGAAGAACTaGCCTTCTGTGGTTCAACCC +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHRQQKN*PSVVQP
Trigger: GGGTTGAACCACAGAAGGCCAGTTCTTCTGCTGACG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGGGCACTCTGAGGCCTaGATGTATTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTGHSEA*MYLGHR
Trigger: TCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
3UTR CAA 72 bp GCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTaGCTTTGGTTTCCTAGCTCCATGCACACTCACATT +
Preference number: 4 (lower is better)
Translates to: AALPHRCASLTD*LWFPSSMHTHI
Trigger: AATGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCVRFSS*ENPSGS
Trigger: GCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAAC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTGTTTCCGGCAGCTGCTaGAGGGAATTACTTGATAAG +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLVSGSC*RELLDK
Trigger: CTTATCAAGTAATTCCCTTCAGCAGCTGCCGGAAAC...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGATCTTGGAAGGCGCTaGGGAGGAAAACTGACAGGA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTDLGRR*GGKLTG
Trigger: TCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGTGACTAAGTGCACCTaGTGGGTGGTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTVTKCT*WVVLLF
Trigger: GAAGAGCAGAACCACCCATCAGGTGCACTTAGTCAC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGCCCACATTTCTCCATaGCTGGCTGGGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLAHISP*LAGASL
Trigger: GAGACTTGCCCCAGCCAGGCATGGAGAAATGTGGGC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLYLGHR*CTLVQK
Trigger: TTTCTGCACGAGCGTACAGCATCGATGGCCCAAATA...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGGTTTGACTATAATGTaGCTGAGGCCTGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCGLTIM*LRPERL
Trigger: CAGCCTCTCAGGCCTCAGGCACATTATAGTCAAACC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAACGTCTTCAGTCCGTaGCTGCTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHNVFSP*LLREHV
Trigger: TACATGTTCCCTCAGCAGCCACGGACTGAAGACGTT...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGTGAGGTGTAGACTGTaGGCCAGATACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVVRCRL*ARYCGS
Trigger: GCTGCCACAGTATCTGGCCCACAGTCTACACCTCAC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTGCACTGCCACTGTACTaGACATTATATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLALPLY*TLYCGG
Trigger: TCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHCTLRS*KALRRK
Trigger: TTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCCVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGTTTCCGGCAGCTGCTaGAGGGAATTACTTGATAAG +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCVSGSC*RELLDK
Trigger: CTTATCAAGTAATTCCCTTCAGCAGCTGCCGGAAAC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCATTCAAATGCCACTTaGGCCCGCTGTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHHSNAT*ARCFLC
Trigger: ACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCATTCAAATGCCACTTaGGCCCGCTGTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCHSNAT*ARCFLC
Trigger: ACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTCAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLQSDVS*LLSVLR
Trigger: TCTTAATACTGACAGCAGTCAAGACACGTCACTCTG...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTGGCAGACTTGCTTCTaGCTATGTTCTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHWQTCF*LCSSHP
Trigger: TGGATGGGAAGAACATAGTCAGAAGCAAGTCTGCCA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIANTCRG*SYSSVA
Trigger: TGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCATCATCATCAGGTCTaGAAGGGTTTCCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVHHHQV*KGFLCR
Trigger: GCGGCAGAGGAAACCCTTTCAGACCTGATGATGATG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTCCCTCCCTGGGTGGTaGCTCTCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVSLPGW*LSFIFV
Trigger: GACAAAGATGAAAGAGAGGCACCACCCAGGGAGGGA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCTGCCCTGGCTGCCATaGAGATCCCTAGAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPLPWLP*RSLELP
Trigger: TGGCAGCTCTAGGGATCTGCATGGCAGCCAGGGCAG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTT +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHSSLSS*VSLFMV
Trigger: AACCATGAATAGACTGACCCAGCTGGAAAGGCTGGA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTTAAGTTTCCCTCCCTaGGTGGTGCCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLSFPP*VVPLFH
Trigger: ATGAAAGAGAGGCACCACCCAGGGAGGGAAACTTAA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGTGAGGTGTAGACTGTaGGCCAGATACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLVRCRL*ARYCGS
Trigger: GCTGCCACAGTATCTGGCCCACAGTCTACACCTCAC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGCACTGCCACTGTACTaGACATTATATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHALPLY*TLYCGG
Trigger: TCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGCACTGCCACTGTACTaGACATTATATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCALPLY*TLYCGG
Trigger: TCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGGGCACTCTGAGGCCTaGATGTATTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLGHSEA*MYLGHR
Trigger: TCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTTTCATCAGGCTGTCTaGAAGACCTCTGTGACTAAG +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLFHQAV*KTSVTK
Trigger: CTTAGTCACAGAGGTCTTCCAGACAGCCTGATGAAA...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGTCTAGGAGAACAATaGGGATGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLCLGEQ*GCVYGG
Trigger: GCCTCCATATACACATCCCCATTGTTCTCCTAGACA...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGTTTCCGGCAGCTGCTaGAGGGAATTACTTGATAAG +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTVSGSC*RELLDK
Trigger: CTTATCAAGTAATTCCCTTCAGCAGCTGCCGGAAAC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTINTCRG*SYSSVA
Trigger: TGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAGATCTTGGAAGGCGCTaGGGAGGAAAACTGACAGGA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIADLGRR*GGKLTG
Trigger: TCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATC...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATCTGTGATCCTGACATaGCTGGAGTTCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTSVILT*LEFFPL
Trigger: CAATGGGAAGAACTCCAGTCATGTCAGGATCACAGA...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCATCATCATCAGGTCTaGAAGGGTTTCCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLHHHQV*KGFLCR
Trigger: GCGGCAGAGGAAACCCTTTCAGACCTGATGATGATG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTYLGHR*CTLVQK
Trigger: TTTCTGCACGAGCGTACAGCATCGATGGCCCAAATA...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCCTGGACTGGATGTCTaGGGATGCTTTTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHPGLDV*GCFSNF
Trigger: AAAGTTAGAAAAGCATCCGCAGACATCCAGTCCAGG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCTTACTCGAATCTCTTaGTTTGCCAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLTRIS*FASSWP
Trigger: AGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTCTAGAGGGATGCCTTaGCACAGATGCCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSRGMP*HRCLRG
Trigger: CCCCCTCAGGCATCTGTGGCAAGGCATCCCTCTAGA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTT +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTSSLSS*VSLFMV
Trigger: AACCATGAATAGACTGACCCAGCTGGAAAGGCTGGA...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCAACGTCTTCAGTCCGTaGCTGCTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVNVFSP*LLREHV
Trigger: TACATGTTCCCTCAGCAGCCACGGACTGAAGACGTT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCGTCAGCAGAAGAACTaGCCTTCTGTGGTTCAACCC +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLRQQKN*PSVVQP
Trigger: GGGTTGAACCACAGAAGGCCAGTTCTTCTGCTGACG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACGTCAGCAGAAGAACTaGCCTTCTGTGGTTCAACCC +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIARQQKN*PSVVQP
Trigger: GGGTTGAACCACAGAAGGCCAGTTCTTCTGCTGACG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCACAACAGCTCCAGTTaGACCACTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVHNSSS*TTSLRR
Trigger: TCTCCTCAGAGAAGTGGTCCAACTGGAGCTGTTGTG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGCACTGCCACTGTACTaGACATTATATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTALPLY*TLYCGG
Trigger: TCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCAGTGCACCTGATGGGTaGTTCTGCTCTTCTGACATG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVSAPDG*FCSSDM
Trigger: CATGTCAGAAGAGCAGAACCACCCATCAGGTGCACT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTVYGGW*ATFSIK
Trigger: TTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTGTCTAGGAGAACAATaGGGATGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCCLGEQ*GCVYGG
Trigger: GCCTCCATATACACATCCCCATTGTTCTCCTAGACA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCAAACATCCAAGTACGTaGGCTGTCTCAAACTACCAA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCKHPST*AVSNYQ
Trigger: TTGGTAGTTTGAGACAGCTCACGTACTTGGATGTTT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTTTGGACTGATTATCTaGCAGCCACATAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCFGLII*QPHSSQ
Trigger: TTGACTGCTATGTGGCTGTCAGATAATCAGTCCAAA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCATCAGAGGTTTGGACTaGTTATCTGACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCIRGLD*LSDSHI
Trigger: TATGTGGCTGTCAGATAATCAGTCCAAACCTCTGAT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTCAGTTGCTGTTATTCTaGTTACTGTTGTGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLQLLLF*LLLCVT
Trigger: AGTCACACACAACAGTAATCAGAATAACAGCAACTG...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGTTGGACCACTTCTCTaGGGAGATAGATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLVGPLL*GDRSSV
Trigger: CACGGAAGATCTATCTCCTCAGAGAAGTGGTCCAAC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAGTTGGACCACTTCTCTaGGGAGATAGATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAVGPLL*GDRSSV
Trigger: CACGGAAGATCTATCTCCTCAGAGAAGTGGTCCAAC...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACGGGGGACCATACAGGTaGGGTGTAGACTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYGGPYR*GVDCGP
Trigger: TGGCCCACAGTCTACACCTCACCTGTATGGTCCCCC...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTCTGTGATCCTGACATaGCTGGAGTTCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVSVILT*LEFFPL
Trigger: CAATGGGAAGAACTCCAGTCATGTCAGGATCACAGA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGTGGTTCTGCTCTTCTaGCATGAATCTATCATCTTG +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHVVLLF*HESIIL
Trigger: CAAGATGATAGATTCATGTCAGAAGAGCAGAACCAC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTCTGGAAGACCTCTGTaGCTAAGTGCACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTISGRPL*LSAPDG
Trigger: CCCATCAGGTGCACTTAGTCACAGAGGTCTTCCAGA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTTCATCACATTCAAATaGCACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHFITFK*HLSPLF
Trigger: AAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTGTTCTCTAGAGGGATaGCTTGCCACAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVCSLEG*LATDAF
Trigger: GAAAGCATCTGTGGCAAGGCATCCCTCTAGAGAACA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
CDS-3UTR GCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACACTTACTCGAATCTCTTaGTTTGCCAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTLTRIS*FASSWP
Trigger: AGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAG...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTAGAACCTCTTCCGTCTaGAACACTCAGGGCAAGGCT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIRTSSV*NTQGKA
Trigger: AGCCTTGCCCTGAGTGTTGCAGACGGAAGAGGTTCT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCCTGGACTGGATGTCTaGGGATGTCGAAAAATGTGC +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLPGLDV*GCRKMC
Trigger: GCACATTTTTCGACATCCGCAGACATCCAGTCCAGG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAACGTCTTCAGTCCGTaGCTGCTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLNVFSP*LLREHV
Trigger: TACATGTTCCCTCAGCAGCCACGGACTGAAGACGTT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTTAAGTTTCCCTCCCTaGGTGGTGCCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVLSFPP*VVPLFH
Trigger: ATGAAAGAGAGGCACCACCCAGGGAGGGAAACTTAA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCGTCAGCAGAAGAACTaGCCTTCTGTGGTTCAACCC +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIRQQKN*PSVVQP
Trigger: GGGTTGAACCACAGAAGGCCAGTTCTTCTGCTGACG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCTGGACATTATATTGTaGGGGACCATACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVLDIIL*GTIQVR
Trigger: CCTCACCTGTATGGTCCCCCACAATATAATGTCCAG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACGACAGGATCTATTTGTaGATTCTGTTTAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHDRIYL*ILFRVP
Trigger: TGGCACCCTAAACAGAATCCACAAATAGATCCTGTC...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIACTLRS*KALRRK
Trigger: TTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCAACACTCTCCTGGACTaGATGTCTGCGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVNTLLD*MSADAF
Trigger: AAAAGCATCCGCAGACATCCAGTCCAGGAGAGTGTT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAAGTGCACCTGATGGGTaGTTCTGCTCTTCTGACATG +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIASAPDG*FCSSDM
Trigger: CATGTCAGAAGAGCAGAACCACCCATCAGGTGCACT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATTTCATCAGGCTGTCTaGAAGACCTCTGTGACTAAG +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTFHQAV*KTSVTK
Trigger: CTTAGTCACAGAGGTCTTCCAGACAGCCTGATGAAA...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACATTCAAATGCCACTTaGGCCCGCTGTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAHSNAT*ARCFLC
Trigger: ACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATGGCAGACTTGCTTCTaGCTATGTTCTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAWQTCF*LCSSHP
Trigger: TGGATGGGAAGAACATAGTCAGAAGCAAGTCTGCCA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCTGGCAGACTTGCTTCTaGCTATGTTCTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLWQTCF*LCSSHP
Trigger: TGGATGGGAAGAACATAGTCAGAAGCAAGTCTGCCA...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGGGGGACCATACAGGTaGGGTGTAGACTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISGGPYR*GVDCGP
Trigger: TGGCCCACAGTCTACACCTCACCTGTATGGTCCCCC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGTGGTTCTGCTCTTCTaGCATGAATCTATCATCTTG +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTVVLLF*HESIIL
Trigger: CAAGATGATAGATTCATGTCAGAAGAGCAGAACCAC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCATCATCATCAGGTCTaGAAGGGTTTCCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPHHHQV*KGFLCR
Trigger: GCGGCAGAGGAAACCCTTTCAGACCTGATGATGATG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACAATGTGCCTGAGGCCTaGGAGGCTGGCCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYNVPEA*EAGPFV
Trigger: GACAAATGGGCCAGCCTCTCAGGCCTCAGGCACATT...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATTCATCACATTCAAATaGCACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTFITFK*HLSPLF
Trigger: AAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAA...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTCCCTCCCTGGGTGGTaGCTCTCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSLPGW*LSFIFV
Trigger: GACAAAGATGAAAGAGAGGCACCACCCAGGGAGGGA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTCATGGTTAACAATATaGTTCAGGTTTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLSWLTI*FRFPDN
Trigger: GTTGTCTGGAAACCTGAAGCATATTGTTAACCATGA...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCVGRML*ITVIFC
Trigger: GCAGAAAATCACAGTTATGCAAAGCATTCTGCCAAC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGGCCCACATTTCTCCATaGCTGGCTGGGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRAHISP*LAGASL
Trigger: GAGACTTGCCCCAGCCAGGCATGGAGAAATGTGGGC...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATGTTCTCTAGAGGGATaGCTTGCCACAGATGCTTTC +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIACSLEG*LATDAF
Trigger: GAAAGCATCTGTGGCAAGGCATCCCTCTAGAGAACA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
CDS-3UTR GCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAAACAAGGACACCGCTTaGCCATGTTCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTNKDTA*PCSMLI
Trigger: TATCAACATTGAACATGGGCAAGCGGTGTCCTTGTT...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCTTAAGTTTCCCTCCCTaGGTGGTGCCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLLSFPP*VVPLFH
Trigger: ATGAAAGAGAGGCACCACCCAGGGAGGGAAACTTAA...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATTAAGTTTCCCTCCCTaGGTGGTGCCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIALSFPP*VVPLFH
Trigger: ATGAAAGAGAGGCACCACCCAGGGAGGGAAACTTAA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCATACTTGCAGTTACTaGCAAATTTCCACCATTGGT +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCHTCSY*QISTIG
Trigger: ACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCGTCAGCAGAAGAACTaGCCTTCTGTGGTTCAACCC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPRQQKN*PSVVQP
Trigger: GGGTTGAACCACAGAAGGCCAGTTCTTCTGCTGACG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCACAACAGCTCCAGTTaGACCACTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIHNSSS*TTSLRR
Trigger: TCTCCTCAGAGAAGTGGTCCAACTGGAGCTGTTGTG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACTGGACATTATATTGTaGGGGACCATACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIALDIIL*GTIQVR
Trigger: CCTCACCTGTATGGTCCCCCACAATATAATGTCCAG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAACACTCTCCTGGACTaGATGTCTGCGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLNTLLD*MSADAF
Trigger: AAAAGCATCCGCAGACATCCAGTCCAGGAGAGTGTT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLVYGGW*ATFSIK
Trigger: TTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTICVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKVRFSS*ENPSGS
Trigger: GCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAAC...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTGTGAGCTGGCCAATTaGGGAAGGCAAAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTICELAN*GRQSFN
Trigger: ATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCATTCAAATGCCACTTaGGCCCGCTGTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIHSNAT*ARCFLC
Trigger: ACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLQSDVS*LLSVLR
Trigger: TCTTAATACTGACAGCAGTCAAGACACGTCACTCTG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTTTCATCTTCTTGTCTaGCTTTGGAGTTACTATCCA +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHFHLLV*LWSYYP
Trigger: TGGATAGTAACTCCAAAGTCAGACAAGAAGATGAAA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTTTCATCTTCTTGTCTaGCTTTGGAGTTACTATCCA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCFHLLV*LWSYYP
Trigger: TGGATAGTAACTCCAAAGTCAGACAAGAAGATGAAA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTATATCCTGCATCTTTaGTCTTTCCATTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCYILHL*SFHYFW
Trigger: CCAGAAGTAATGGAAAGATCAAAGATGCAGGATATA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTGGCAGACTTGCTTCTaGCTATGTTCTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIWQTCF*LCSSHP
Trigger: TGGATGGGAAGAACATAGTCAGAAGCAAGTCTGCCA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACGGGGGACCATACAGGTaGGGTGTAGACTGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHGGPYR*GVDCGP
Trigger: TGGCCCACAGTCTACACCTCACCTGTATGGTCCCCC...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTCTGTGATCCTGACATaGCTGGAGTTCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTISVILT*LEFFPL
Trigger: CAATGGGAAGAACTCCAGTCATGTCAGGATCACAGA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAAATGTGCCTGAGGCCTaGGAGGCTGGCCCATTTGTC +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISNVPEA*EAGPFV
Trigger: GACAAATGGGCCAGCCTCTCAGGCCTCAGGCACATT...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTTCATCACATTCAAATaGCACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVFITFK*HLSPLF
Trigger: AAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTCATGGTTAACAATATaGTTCAGGTTTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHSWLTI*FRFPDN
Trigger: GTTGTCTGGAAACCTGAAGCATATTGTTAACCATGA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGCCCACATTTCTCCATaGCTGGCTGGGGCAAGTCTC +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISAHISP*LAGASL
Trigger: GAGACTTGCCCCAGCCAGGCATGGAGAAATGTGGGC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIYLGHR*CTLVQK
Trigger: TTTCTGCACGAGCGTACAGCATCGATGGCCCAAATA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTGGCAACATTTTCAACTaGTTTTCTCTAAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SALSAALPHRCASLTDLLGNIFN*FSLSSR
Trigger: TCTAGAACTTAGAGAAAACCAGTTGAAAATGTTGCC...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCTCATGTTTGTGAGCTaGCCAATTGAGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLLMFVS*PIEEGK
Trigger: TTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCACAACAGCTCCAGTTaGACCACTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPHNSSS*TTSLRR
Trigger: TCTCCTCAGAGAAGTGGTCCAACTGGAGCTGTTGTG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATGTGAGGTGTAGACTGTaGGCCAGATACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYVRCRL*ARYCGS
Trigger: GCTGCCACAGTATCTGGCCCACAGTCTACACCTCAC...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGAGTGCACCTGATGGGTaGTTCTGCTCTTCTGACATG +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKSAPDG*FCSSDM
Trigger: CATGTCAGAAGAGCAGAACCACCCATCAGGTGCACT...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATTTCATCAGGCTGTCTaGAAGACCTCTGTGACTAAG +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAFHQAV*KTSVTK
Trigger: CTTAGTCACAGAGGTCTTCCAGACAGCCTGATGAAA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPCVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATGTCTAGGAGAACAATaGGGATGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIACLGEQ*GCVYGG
Trigger: GCCTCCATATACACATCCCCATTGTTCTCCTAGACA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGGTTTCCGGCAGCTGCTaGAGGGAATTACTTGATAAG +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKVSGSC*RELLDK
Trigger: CTTATCAAGTAATTCCCTTCAGCAGCTGCCGGAAAC...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATTTGGACTGATTATCTaGCAGCCACATAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAFGLII*QPHSSQ
Trigger: TTGACTGCTATGTGGCTGTCAGATAATCAGTCCAAA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCATCAGAGGTTTGGACTaGTTATCTGACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLIRGLD*LSDSHI
Trigger: TATGTGGCTGTCAGATAATCAGTCCAAACCTCTGAT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGTGTCTGTTTCTTTTTaGAGAGGTATCAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVVSVSF*RGIRGL
Trigger: CAAACCTCTGATACCTCTTCAAAAAGAAACAGACAC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACATTTCATCTTCTTGTCTaGCTTTGGAGTTACTATCCA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTFHLLV*LWSYYP
Trigger: TGGATAGTAACTCCAAAGTCAGACAAGAAGATGAAA...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISNTCRG*SYSSVA
Trigger: TGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTT...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCTGAGGAGGAAAACTaGCAGGATCTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIAEEEN*QDLFVD
Trigger: ATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATGATCTTGGAAGGCGCTaGGGAGGAAAACTGACAGGA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYDLGRR*GGKLTG
Trigger: TCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATC...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTGAGGGACGGGCACTCTaGGGCCTGGATGTATTTGGG +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSEGRAL*GLDVFG
Trigger: CCCAAATACATCCAGGCCTCAGAGTGCCCGTCCCTC...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTCTGGAAGACCTCTGTaGCTAAGTGCACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRSGRPL*LSAPDG
Trigger: CCCATCAGGTGCACTTAGTCACAGAGGTCTTCCAGA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTCTGGAAGACCTCTGTaGCTAAGTGCACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYSGRPL*LSAPDG
Trigger: CCCATCAGGTGCACTTAGTCACAGAGGTCTTCCAGA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACCATCATCATCAGGTCTaGAAGGGTTTCCTCTGCCGC +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYHHHQV*KGFLCR
Trigger: GCGGCAGAGGAAACCCTTTCAGACCTGATGATGATG...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCTGTTCTTCCCACAATaGAGGATTAAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHLFFPQ*RIKTFI
Trigger: AATGAAAGTTTTAATCCTGCATTGTGGGAAGAACAG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTCCCTCCCTGGGTGGTaGCTCTCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYSLPGW*LSFIFV
Trigger: GACAAAGATGAAAGAGAGGCACCACCCAGGGAGGGA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCTGGAGGTCGCATCTCTaGCATTTTCATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLWRSHL*HFHFFI
Trigger: GATGAAGAAATGAAAATGGCAGAGATGCGACCTCCA...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTCATGAGGAACCTTaGTTTTTCCTGGAGGATCTA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLSHEEP*FFLEDL
Trigger: TAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAACAAGGACACCGCTTaGCCATGTTCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLNKDTA*PCSMLI
Trigger: TATCAACATTGAACATGGGCAAGCGGTGTCCTTGTT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCTAAGTTCTAGAATCTaGAGTTTAGTTAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLSSRI*SLVNLP
Trigger: TGGCAGATTAACTAAACTCCAGATTCTAGAACTTAG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGGCAACATTTTCAACTaGTTTTCTCTAAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCGNIFN*FSLSSR
Trigger: TCTAGAACTTAGAGAAAACCAGTTGAAAATGTTGCC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTT +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSSLSS*VSLFMV
Trigger: AACCATGAATAGACTGACCCAGCTGGAAAGGCTGGA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCTCATGTTTGTGAGCTaGCCAATTGAGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTILMFVS*PIEEGK
Trigger: TTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCATACTTGCAGTTACTaGCAAATTTCCACCATTGGT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVHTCSY*QISTIG
Trigger: ACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGGCACTGCCACTGTACTaGACATTATATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKALPLY*TLYCGG
Trigger: TCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGACAGGATCTATTTGTaGATTCTGTTTAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLDRIYL*ILFRVP
Trigger: TGGCACCCTAAACAGAATCCACAAATAGATCCTGTC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGGGCACTCTGAGGCCTaGATGTATTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISGHSEA*MYLGHR
Trigger: TCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYVRFSS*ENPSGS
Trigger: GCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAAC...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYVRFSS*ENPSGS
Trigger: GCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAAC...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTAAACATCCAAGTACGTaGGCTGTCTCAAACTACCAA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIKHPST*AVSNYQ
Trigger: TTGGTAGTTTGAGACAGCTCACGTACTTGGATGTTT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTTTGGACTGATTATCTaGCAGCCACATAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIFGLII*QPHSSQ
Trigger: TTGACTGCTATGTGGCTGTCAGATAATCAGTCCAAA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGTGTCTGTTTCTTTTTaGAGAGGTATCAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLVSVSF*RGIRGL
Trigger: CAAACCTCTGATACCTCTTCAAAAAGAAACAGACAC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAGTGTCTGTTTCTTTTTaGAGAGGTATCAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAVSVSF*RGIRGL
Trigger: CAAACCTCTGATACCTCTTCAAAAAGAAACAGACAC...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCAGTTGCTGTTATTCTaGTTACTGTTGTGTGTGACT +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLQLLLF*LLLCVT
Trigger: AGTCACACACAACAGTAATCAGAATAACAGCAACTG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACAGTTGCTGTTATTCTaGTTACTGTTGTGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAQLLLF*LLLCVT
Trigger: AGTCACACACAACAGTAATCAGAATAACAGCAACTG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTTTCATCTTCTTGTCTaGCTTTGGAGTTACTATCCA +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVFHLLV*LWSYYP
Trigger: TGGATAGTAACTCCAAAGTCAGACAAGAAGATGAAA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGATTTGAATCAAACTTaGAAACTGCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVDLNQT*KLPLYL
Trigger: CAGGTACAAAGGCAGTTTTCAAGTTTGATTCAAATC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGGCTGAGGAGGAAAACTaGCAGGATCTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKAEEEN*QDLFVD
Trigger: ATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGC...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTGCTGAGGAGGAAAACTaGCAGGATCTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPAEEEN*QDLFVD
Trigger: ATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGC...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGTGGTTCTGCTCTTCTaGCATGAATCTATCATCTTG +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIVVLLF*HESIIL
Trigger: CAAGATGATAGATTCATGTCAGAAGAGCAGAACCAC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTGACTAAGTGCACCTaGTGGGTGGTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISVTKCT*WVVLLF
Trigger: GAAGAGCAGAACCACCCATCAGGTGCACTTAGTCAC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGAACTTGTTCCAAGCTaGAATGAGAATAATCTAGAG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVELVPS*NENNLE
Trigger: CTCTAGATTATTCTCATTGCAGCTTGGAACAAGTTC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACACTGTTCTTCCCACAATaGAGGATTAAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTLFFPQ*RIKTFI
Trigger: AATGAAAGTTTTAATCCTGCATTGTGGGAAGAACAG...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATCCCTCCCTGGGTGGTaGCTCTCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKSLPGW*LSFIFV
Trigger: GACAAAGATGAAAGAGAGGCACCACCCAGGGAGGGA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCATAACTGTGATTTTCTaGACTCTCAGATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVITVIF*TLRSWK
Trigger: CTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTAT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTAACAAGGACACCGCTTaGCCATGTTCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTINKDTA*PCSMLI
Trigger: TATCAACATTGAACATGGGCAAGCGGTGTCCTTGTT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATGGATGTCGAAAAATGTaGCCACCAGAACCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYGCRKM*PPEPLP
Trigger: CGGAAGAGGTTCTGGTGGGCACATTTTTCGACATCC...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACACTAAGTTCTAGAATCTaGAGTTTAGTTAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTLSSRI*SLVNLP
Trigger: TGGCAGATTAACTAAACTCCAGATTCTAGAACTTAG...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGGCAACATTTTCAACTaGTTTTCTCTAAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTGNIFN*FSLSSR
Trigger: TCTAGAACTTAGAGAAAACCAGTTGAAAATGTTGCC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATAACGTCTTCAGTCCGTaGCTGCTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYNVFSP*LLREHV
Trigger: TACATGTTCCCTCAGCAGCCACGGACTGAAGACGTT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATCACAACAGCTCCAGTTaGACCACTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYHNSSS*TTSLRR
Trigger: TCTCCTCAGAGAAGTGGTCCAACTGGAGCTGTTGTG...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCAGCTCTTATTATATCTaGCTCTTCAGGGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVSSYYI*LFRVVI
Trigger: AATCACAACCCTGAAGAGCCAGATATAATAAGAGCT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGACAGGATCTATTTGTaGATTCTGTTTAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIDRIYL*ILFRVP
Trigger: TGGCACCCTAAACAGAATCCACAAATAGATCCTGTC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYCTLRS*KALRRK
Trigger: TTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRCTLRS*KALRRK
Trigger: TTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTAGGGCACTCTGAGGCCTaGATGTATTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLGHSEA*MYLGHR
Trigger: TCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGCTTTTCTAACTTTTTaGCCTCAATGTGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVAFLTF*PQCVVV
Trigger: TACTACGACACATTGAGGCCAAAAAGTTAGAAAAGC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCTTCAGGCACTTCTGTaGATTCATTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTILQALL*IHYFPN
Trigger: ATTTGGGAAGTAATGAATTCACAGAAGTGCCTGAAG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTAAACATCCAAGTACGTaGGCTGTCTCAAACTACCAA +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPKHPST*AVSNYQ
Trigger: TTGGTAGTTTGAGACAGCTCACGTACTTGGATGTTT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTGTGACATTTTTCAATaGACCAATAGTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTICDIFQ*TNSFRQ
Trigger: CTGCCGGAAACTATTGGTTCATTGAAAAATGTCACA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTGTGAGCTGGCCAATTaGGGAAGGCAAAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYCELAN*GRQSFN
Trigger: ATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTGGCAGACTTGCTTCTaGCTATGTTCTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYWQTCF*LCSSHP
Trigger: TGGATGGGAAGAACATAGTCAGAAGCAAGTCTGCCA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCA +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQNTCRG*SYSSVA
Trigger: TGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTAGATCTTGGAAGGCGCTaGGGAGGAAAACTGACAGGA +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLDLGRR*GGKLTG
Trigger: TCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATC...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTCTGTGATCCTGACATaGCTGGAGTTCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYSVILT*LEFFPL
Trigger: CAATGGGAAGAACTCCAGTCATGTCAGGATCACAGA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGGTGGTTCTGCTCTTCTaGCATGAATCTATCATCTTG +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKVVLLF*HESIIL
Trigger: CAAGATGATAGATTCATGTCAGAAGAGCAGAACCAC...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGAACTTGTTCCAAGCTaGAATGAGAATAATCTAGAG +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLELVPS*NENNLE
Trigger: CTCTAGATTATTCTCATTGCAGCTTGGAACAAGTTC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCCCTCCCTGGGTGGTaGCTCTCTTTCATCTTTGTC +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHSLPGW*LSFIFV
Trigger: GACAAAGATGAAAGAGAGGCACCACCCAGGGAGGGA...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTGGAGGTCGCATCTCTaGCATTTTCATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPWRSHL*HFHFFI
Trigger: GATGAAGAAATGAAAATGGCAGAGATGCGACCTCCA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCCAAGTACTATATCCTaGATCTTTGATCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVPSTIS*IFDLSI
Trigger: AATGGAAAGATCAAAGATGCAGGATATAGTACTTGG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIVGRML*ITVIFC
Trigger: GCAGAAAATCACAGTTATGCAAAGCATTCTGCCAAC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGAGTCATGAGGAACCTTaGTTTTTCCTGGAGGATCTA +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKSHEEP*FFLEDL
Trigger: TAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACT...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTAGTCATGAGGAACCTTaGTTTTTCCTGGAGGATCTA +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSHEEP*FFLEDL
Trigger: TAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTCTAGAGGGATGCCTTaGCACAGATGCTTTCATCAG +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYSRGMP*HRCFHQ
Trigger: CTGATGAAAGCATCTGTGGCAAGGCATCCCTCTAGA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
CDS-3UTR GCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGGTTTGACTATAATGTaGCTGAGGCCTGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISGLTIM*LRPERL
Trigger: CAGCCTCTCAGGCCTCAGGCACATTATAGTCAAACC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAGGTTTGACTATAATGTaGCTGAGGCCTGAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKGLTIM*LRPERL
Trigger: CAGCCTCTCAGGCCTCAGGCACATTATAGTCAAACC...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGGCAACATTTTCAACTaGTTTTCTCTAAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SAICLGATSRLTIALHTVGNIFN*FSLSSR
Trigger: TCTAGAACTTAGAGAAAACCAGTTGAAAATGTTGCC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRSSLSS*VSLFMV
Trigger: AACCATGAATAGACTGACCCAGCTGGAAAGGCTGGA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAAACGTCTTCAGTCCGTaGCTGCTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISNVFSP*LLREHV
Trigger: TACATGTTCCCTCAGCAGCCACGGACTGAAGACGTT...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTTAAGTTTCCCTCCCTaGGTGGTGCCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYLSFPP*VVPLFH
Trigger: ATGAAAGAGAGGCACCACCCAGGGAGGGAAACTTAA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGCTCTTATTATATCTaGCTCTTCAGGGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLSSYYI*LFRVVI
Trigger: AATCACAACCCTGAAGAGCCAGATATAATAAGAGCT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGGTGAGGTGTAGACTGTaGGCCAGATACTGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQVRCRL*ARYCGS
Trigger: GCTGCCACAGTATCTGGCCCACAGTCTACACCTCAC...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTGGACATTATATTGTaGGGGACCATACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLDIIL*GTIQVR
Trigger: CCTCACCTGTATGGTCCCCCACAATATAATGTCCAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKCTLRS*KALRRK
Trigger: TTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGGGGCACTCTGAGGCCTaGATGTATTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQGHSEA*MYLGHR
Trigger: TCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGGGCACTCTGAGGCCTaGATGTATTTGGGCCATCGA +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEGHSEA*MYLGHR
Trigger: TCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRVYGGW*ATFSIK
Trigger: TTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCATGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISCVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLVRFSS*ENPSGS
Trigger: GCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAAC...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCTTCAGGCACTTCTGTaGATTCATTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPLQALL*IHYFPN
Trigger: ATTTGGGAAGTAATGAATTCACAGAAGTGCCTGAAG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTGTGACATTTTTCAATaGACCAATAGTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPCDIFQ*TNSFRQ
Trigger: CTGCCGGAAACTATTGGTTCATTGAAAAATGTCACA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCATGTGAGCTGGCCAATTaGGGAAGGCAAAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISCELAN*GRQSFN
Trigger: ATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACA...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACATTCAAATGCCACTTaGGCCCGCTGTTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKHSNAT*ARCFLC
Trigger: ACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATCAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYQSDVS*LLSVLR
Trigger: TCTTAATACTGACAGCAGTCAAGACACGTCACTCTG...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCATGGCAGACTTGCTTCTaGCTATGTTCTTCCCATCCA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISWQTCF*LCSSHP
Trigger: TGGATGGGAAGAACATAGTCAGAAGCAAGTCTGCCA...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGATTTGAATCAAACTTaGAAACTGCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIDLNQT*KLPLYL
Trigger: CAGGTACAAAGGCAGTTTTCAAGTTTGATTCAAATC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATGCTGAGGAGGAAAACTaGCAGGATCTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYAEEEN*QDLFVD
Trigger: ATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGC...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGGCTGAGGAGGAAAACTaGCAGGATCTATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRAEEEN*QDLFVD
Trigger: ATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGC...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGATCTTGGAAGGCGCTaGGGAGGAAAACTGACAGGA +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEDLGRR*GGKLTG
Trigger: TCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGTGACTAAGTGCACCTaGTGGGTGGTTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEVTKCT*WVVLLF
Trigger: GAAGAGCAGAACCACCCATCAGGTGCACTTAGTCAC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGTCTGGAAGACCTCTGTaGCTAAGTGCACCTGATGGG +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQSGRPL*LSAPDG
Trigger: CCCATCAGGTGCACTTAGTCACAGAGGTCTTCCAGA...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGAACTTGTTCCAAGCTaGAATGAGAATAATCTAGAG +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIELVPS*NENNLE
Trigger: CTCTAGATTATTCTCATTGCAGCTTGGAACAAGTTC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTAGACAACTTCATACTTaGAGTTACTGGCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIRQLHT*SYWQIS
Trigger: GGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTACGGAGAAGAACAGTTaGTGTTATTCTGATTACTGT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTITEKNS*CYSDYC
Trigger: ACAGTAATCAGAATAACAGCAACTGTTCTTCTCCGT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCCAAGTACTATATCCTaGATCTTTGATCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLPSTIS*IFDLSI
Trigger: AATGGAAAGATCAAAGATGCAGGATATAGTACTTGG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPVGRML*ITVIFC
Trigger: GCAGAAAATCACAGTTATGCAAAGCATTCTGCCAAC...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKYLGHR*CTLVQK
Trigger: TTTCTGCACGAGCGTACAGCATCGATGGCCCAAATA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCATATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISYLGHR*CTLVQK
Trigger: TTTCTGCACGAGCGTACAGCATCGATGGCCCAAATA...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTGGATGTCTGCGGATaGTTTTCTAACTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLDVCG*FSNFLA
Trigger: GGCCAAAAAGTTAGAAAAGCATCCGCAGACATCCAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTTACTCGAATCTCTTaGTTTGCCAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLTRIS*FASSWP
Trigger: AGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCTAAGTTCTAGAATCTaGAGTTTAGTTAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: NLALKSEPTSINFIYPLLLSSRI*SLVNLP
Trigger: TGGCAGATTAACTAAACTCCAGATTCTAGAACTTAG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTCATGTTTGTGAGCTaGCCAATTGAGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLMFVS*PIEEGK
Trigger: TTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCATTAAGTTTCCCTCCCTaGGTGGTGCCTCTCTTTCAT +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISLSFPP*VVPLFH
Trigger: ATGAAAGAGAGGCACCACCCAGGGAGGGAAACTTAA...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCACAACAGCTCCAGTTaGACCACTTCTCTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHHNSSS*TTSLRR
Trigger: TCTCCTCAGAGAAGTGGTCCAACTGGAGCTGTTGTG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACTGGACATTATATTGTaGGGGACCATACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKLDIIL*GTIQVR
Trigger: CCTCACCTGTATGGTCCCCCACAATATAATGTCCAG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCTTTTCTAACTTTTTaGCCTCAATGTGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: YEIDSSAICLGATSRLTIAFLTF*PQCVVV
Trigger: TACTACGACACATTGAGGCCAAAAAGTTAGAAAAGC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAGTATATGGAGGCTGGTaGGCCACTTTCAGCATCAAA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKVYGGW*ATFSIK
Trigger: TTTGATGCTGAAAGTGGCCCACCAGCCTCCATATAC...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTGTCTAGGAGAACAATaGGGATGTGTATATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYCLGEQ*GCVYGG
Trigger: GCCTCCATATACACATCCCCATTGTTCTCCTAGACA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATCTTTTCTAACTTTTTaGCCTCAATGTGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: SEPTSINFIYPLLSMHIASFLTF*PQCVVV
Trigger: TACTACGACACATTGAGGCCAAAAAGTTAGAAAAGA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATAAACATCCAAGTACGTaGGCTGTCTCAAACTACCAA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYKHPST*AVSNYQ
Trigger: TTGGTAGTTTGAGACAGCTCACGTACTTGGATGTTT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTTTGGACTGATTATCTaGCAGCCACATAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYFGLII*QPHSSQ
Trigger: TTGACTGCTATGTGGCTGTCAGATAATCAGTCCAAA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTTTGGACTGATTATCTaGCAGCCACATAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRFGLII*QPHSSQ
Trigger: TTGACTGCTATGTGGCTGTCAGATAATCAGTCCAAA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGATCAGAGGTTTGGACTaGTTATCTGACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRIRGLD*LSDSHI
Trigger: TATGTGGCTGTCAGATAATCAGTCCAAACCTCTGAT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCACAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISQSDVS*LLSVLR
Trigger: TCTTAATACTGACAGCAGTCAAGACACGTCACTCTG...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTATATCCTGCATCTTTaGTCTTTCCATTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPYILHL*SFHYFW
Trigger: CCAGAAGTAATGGAAAGATCAAAGATGCAGGATATA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGTTGGACCACTTCTCTaGGGAGATAGATCTTCCGTG +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEVGPLL*GDRSSV
Trigger: CACGGAAGATCTATCTCCTCAGAGAAGTGGTCCAAC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTGATTTGAATCAAACTTaGAAACTGCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPDLNQT*KLPLYL
Trigger: CAGGTACAAAGGCAGTTTTCAAGTTTGATTCAAATC...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTATCTGTGATCCTGACATaGCTGGAGTTCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLSVILT*LEFFPL
Trigger: CAATGGGAAGAACTCCAGTCATGTCAGGATCACAGA...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGGAACTTGTTCCAAGCTaGAATGAGAATAATCTAGAG +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKELVPS*NENNLE
Trigger: CTCTAGATTATTCTCATTGCAGCTTGGAACAAGTTC...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTAGACAACTTCATACTTaGAGTTACTGGCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPRQLHT*SYWQIS
Trigger: GGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTCATGGTTAACAATATaGTTCAGGTTTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSWLTI*FRFPDN
Trigger: GTTGTCTGGAAACCTGAAGCATATTGTTAACCATGA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTGGAGGTCGCATCTCTaGCATTTTCATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYWRSHL*HFHFFI
Trigger: GATGAAGAAATGAAAATGGCAGAGATGCGACCTCCA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTGGAGGTCGCATCTCTaGCATTTTCATTTCTTCATC +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRWRSHL*HFHFFI
Trigger: GATGAAGAAATGAAAATGGCAGAGATGCGACCTCCA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGACGGAGAAGAACAGTTaGTGTTATTCTGATTACTGT +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKTEKNS*CYSDYC
Trigger: ACAGTAATCAGAATAACAGCAACTGTTCTTCTCCGT...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTACGGAGAAGAACAGTTaGTGTTATTCTGATTACTGT +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPTEKNS*CYSDYC
Trigger: ACAGTAATCAGAATAACAGCAACTGTTCTTCTCCGT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTATAACTGTGATTTTCTaGACTCTCAGATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPITVIF*TLRSWK
Trigger: CTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTAT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTATATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLYLGHR*CTLVQK
Trigger: TTTCTGCACGAGCGTACAGCATCGATGGCCCAAATA...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGAGTCATGAGGAACCTTaGTTTTTCCTGGAGGATCTA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRSHEEP*FFLEDL
Trigger: TAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCACTGGATGTCTGCGGATaGTTTTCTAACTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISLDVCG*FSNFLA
Trigger: GGCCAAAAAGTTAGAAAAGCATCCGCAGACATCCAG...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACCTGGACTGGATGTCTaGGGATGCTTTTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKPGLDV*GCFSNF
Trigger: AAAGTTAGAAAAGCATCCGCAGACATCCAGTCCAGG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATAACAAGGACACCGCTTaGCCATGTTCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYNKDTA*PCSMLI
Trigger: TATCAACATTGAACATGGGCAAGCGGTGTCCTTGTT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGGCATTCGAAAAATGTaGCCACCAGAACCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEGIRKM*PPEPLP
Trigger: CGGAAGAGGTTCTGGTGGGCACATTTTTCGAATGCC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169083.8
CDS-3UTR CCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACTCATGTTTGTGAGCTaGCCAATTGAGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKLMFVS*PIEEGK
Trigger: TTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAACGTCTTCAGTCCGTaGCTGCTGAGGGAACATGTA +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQNVFSP*LLREHV
Trigger: TACATGTTCCCTCAGCAGCCACGGACTGAAGACGTT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTAGCTCTTATTATATCTaGCTCTTCAGGGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSSYYI*LFRVVI
Trigger: AATCACAACCCTGAAGAGCCAGATATAATAAGAGCT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACTGGACATTATATTGTaGGGGACCATACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLLDIIL*GTIQVR
Trigger: CCTCACCTGTATGGTCCCCCACAATATAATGTCCAG...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFECTLRS*KALRRK
Trigger: TTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAAACACTCTCCTGGACTaGATGTCTGCGGATGCTTTT +
Preference number: 4 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLNTLLD*MSADAF
Trigger: AAAAGCATCCGCAGACATCCAGTCCAGGAGAGTGTT...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTAGTGCACCTGATGGGTaGTTCTGCTCTTCTGACATG +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSSAPDG*FCSSDM
Trigger: CATGTCAGAAGAGCAGAACCACCCATCAGGTGCACT...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTGTGTATATGGAGGCTaGTGGGCCACTTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFECVYGG*WATFSI
Trigger: GATGCTGAAAGTGGCCCACCAGCCTCCATATACACA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTTCAGGCACTTCTGTaGATTCATTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLQALL*IHYFPN
Trigger: ATTTGGGAAGTAATGAATTCACAGAAGTGCCTGAAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGTTTCCGGCAGCTGCTaGAGGGAATTACTTGATAAG +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEVSGSC*RELLDK
Trigger: CTTATCAAGTAATTCCCTTCAGCAGCTGCCGGAAAC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTGTGACATTTTTCAATaGACCAATAGTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYCDIFQ*TNSFRQ
Trigger: CTGCCGGAAACTATTGGTTCATTGAAAAATGTCACA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTGTGACATTTTTCAATaGACCAATAGTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRCDIFQ*TNSFRQ
Trigger: CTGCCGGAAACTATTGGTTCATTGAAAAATGTCACA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTTGTGAGCTGGCCAATTaGGGAAGGCAAAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSCELAN*GRQSFN
Trigger: ATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACA...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTGTGAGCTGGCCAATTaGGGAAGGCAAAGCTTCAAT +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFECELAN*GRQSFN
Trigger: ATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATTTGGACTGATTATCTaGCAGCCACATAGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKFGLII*QPHSSQ
Trigger: TTGACTGCTATGTGGCTGTCAGATAATCAGTCCAAA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAATCAGAGGTTTGGACTaGTTATCTGACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKIRGLD*LSDSHI
Trigger: TATGTGGCTGTCAGATAATCAGTCCAAACCTCTGAT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGGTGTCTGTTTCTTTTTaGAGAGGTATCAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRVSVSF*RGIRGL
Trigger: CAAACCTCTGATACCTCTTCAAAAAGAAACAGACAC...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACGTGTCTGTTTCTTTTTaGAGAGGTATCAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYVSVSF*RGIRGL
Trigger: CAAACCTCTGATACCTCTTCAAAAAGAAACAGACAC...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCAGTTGCTGTTATTCTaGTTACTGTTGTGTGTGACT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRQLLLF*LLLCVT
Trigger: AGTCACACACAACAGTAATCAGAATAACAGCAACTG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHQSDVS*LLSVLR
Trigger: TCTTAATACTGACAGCAGTCAAGACACGTCACTCTG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTCTGTGATCCTGACATaGCTGGAGTTCTTCCCATTG +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFESVILT*LEFFPL
Trigger: CAATGGGAAGAACTCCAGTCATGTCAGGATCACAGA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATTCATCACATTCAAATaGCACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKFITFK*HLSPLF
Trigger: AAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGTAAAGCGCTATCACACCGGTCCATTTAGAAACCCTTTAAAGACTCTGAAGCCAAGTACTATATCCTaGATCTTTGATCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: VVKRYHTGPFRNPLKTLKPSTIS*IFDLSI
Trigger: AATGGAAAGATCAAAGATGCAGGATATAGTACTTGG...CTTCAGAGTCTTTAAAGGGTTTCTAAATGGACCGGTGTGATAGCGCTTTACCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCCTGGACTGGATGTCTaGGGATGCTTTTCTAACTTT +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHPGLDV*GCFSNF
Trigger: AAAGTTAGAAAAGCATCCGCAGACATCCAGTCCAGG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCTTACTCGAATCTCTTaGTTTGCCAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHLTRIS*FASSWP
Trigger: AGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAAACAAGGACACCGCTTaGCCATGTTCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKNKDTA*PCSMLI
Trigger: TATCAACATTGAACATGGGCAAGCGGTGTCCTTGTT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGTCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTT +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQSSLSS*VSLFMV
Trigger: AACCATGAATAGACTGACCCAGCTGGAAAGGCTGGA...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCTGGACATTATATTGTaGGGGACCATACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFELDIIL*GTIQVR
Trigger: CCTCACCTGTATGGTCCCCCACAATATAATGTCCAG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTGCACTGCCACTGTACTaGACATTATATTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSALPLY*TLYCGG
Trigger: TCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTATTTCATCAGGCTGTCTaGAAGACCTCTGTGACTAAG +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLFHQAV*KTSVTK
Trigger: CTTAGTCACAGAGGTCTTCCAGACAGCCTGATGAAA...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
3UTR CAA 72 bp ATCAATACTTGTTACAGTAACAAGGAACAAAGGCAATaGGTGGTAAAGCGCTATCACACCGGTCCATTTAGA +
Preference number: 4 (lower is better)
Translates to: INTCYSNKEQRQ*VVKRYHTGPFR
Trigger: TCTAAATGGACCGGTGTGATAGCGCTTTACCACCAATTGCCTTTGTTCCTTGTTACTGTAACAAGTATTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCATGTGACATTTTTCAATaGACCAATAGTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISCDIFQ*TNSFRQ
Trigger: CTGCCGGAAACTATTGGTTCATTGAAAAATGTCACA...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTCAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGA +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSQSDVS*LLSVLR
Trigger: TCTTAATACTGACAGCAGTCAAGACACGTCACTCTG...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTTTCATCTTCTTGTCTaGCTTTGGAGTTACTATCCA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRFHLLV*LWSYYP
Trigger: TGGATAGTAACTCCAAAGTCAGACAAGAAGATGAAA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTATATCCTGCATCTTTaGTCTTTCCATTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYYILHL*SFHYFW
Trigger: CCAGAAGTAATGGAAAGATCAAAGATGCAGGATATA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACGAACTTGTTCCAAGCTaGAATGAGAATAATCTAGAG +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYELVPS*NENNLE
Trigger: CTCTAGATTATTCTCATTGCAGCTTGGAACAAGTTC...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTTCATCACATTCAAATaGCACTTGAGCCCGCTGTTT +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHFITFK*HLSPLF
Trigger: AAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAA...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATAGACAACTTCATACTTaGAGTTACTGGCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYRQLHT*SYWQIS
Trigger: GGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACAGACAACTTCATACTTaGAGTTACTGGCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYRQLHT*SYWQIS
Trigger: GGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCT...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATACGGAGAAGAACAGTTaGTGTTATTCTGATTACTGT +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYTEKNS*CYSDYC
Trigger: ACAGTAATCAGAATAACAGCAACTGTTCTTCTCCGT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGACGGAGAAGAACAGTTaGTGTTATTCTGATTACTGT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRTEKNS*CYSDYC
Trigger: ACAGTAATCAGAATAACAGCAACTGTTCTTCTCCGT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGATAACTGTGATTTTCTaGACTCTCAGATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRITVIF*TLRSWK
Trigger: CTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTAT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKVGRML*ITVIFC
Trigger: GCAGAAAATCACAGTTATGCAAAGCATTCTGCCAAC...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTAAGTCATGAGGAACCTTaGTTTTTCCTGGAGGATCTA +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLSHEEP*FFLEDL
Trigger: TAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACT...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGCTGGATGTCTGCGGATaGTTTTCTAACTTTTTGGCC +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQLDVCG*FSNFLA
Trigger: GGCCAAAAAGTTAGAAAAGCATCCGCAGACATCCAG...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTCTTACTCGAATCTCTTaGTTTGCCAGTTCATGGCCT +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSLTRIS*FASSWP
Trigger: AGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAG...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCTCATGTTTGTGAGCTaGCCAATTGAGGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFELMFVS*PIEEGK
Trigger: TTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATAGCTCTTATTATATCTaGCTCTTCAGGGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYSSYYI*LFRVVI
Trigger: AATCACAACCCTGAAGAGCCAGATATAATAAGAGCT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACGACAGGATCTATTTGTaGATTCTGTTTAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHDRIYL*ILFRVP
Trigger: TGGCACCCTAAACAGAATCCACAAATAGATCCTGTC...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTACTTCAGGCACTTCTGTaGATTCATTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLLQALL*IHYFPN
Trigger: ATTTGGGAAGTAATGAATTCACAGAAGTGCCTGAAG...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGAAACATCCAAGTACGTaGGCTGTCTCAAACTACCAA +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEKHPST*AVSNYQ
Trigger: TTGGTAGTTTGAGACAGCTCACGTACTTGGATGTTT...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTATCAGAGGTTTGGACTaGTTATCTGACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSIRGLD*LSDSHI
Trigger: TATGTGGCTGTCAGATAATCAGTCCAAACCTCTGAT...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGATCAGAGGTTTGGACTaGTTATCTGACAGCCACATA +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEIRGLD*LSDSHI
Trigger: TATGTGGCTGTCAGATAATCAGTCCAAACCTCTGAT...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTAGTGTCTGTTTCTTTTTaGAGAGGTATCAGAGGTTTG +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLVSVSF*RGIRGL
Trigger: CAAACCTCTGATACCTCTTCAAAAAGAAACAGACAC...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATATATCCTGCATCTTTaGTCTTTCCATTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKYILHL*SFHYFW
Trigger: CCAGAAGTAATGGAAAGATCAAAGATGCAGGATATA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGATTTGAATCAAACTTaGAAACTGCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISDLNQT*KLPLYL
Trigger: CAGGTACAAAGGCAGTTTTCAAGTTTGATTCAAATC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATCTGTTCTTCCCACAATaGAGGATTAAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYLFFPQ*RIKTFI
Trigger: AATGAAAGTTTTAATCCTGCATTGTGGGAAGAACAG...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTGTTCTTCCCACAATaGAGGATTAAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLFFPQ*RIKTFI
Trigger: AATGAAAGTTTTAATCCTGCATTGTGGGAAGAACAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAAGACAACTTCATACTTaGAGTTACTGGCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISRQLHT*SYWQIS
Trigger: GGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCT...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACCCAAGTACTATATCCTaGATCTTTGATCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYPSTIS*IFDLSI
Trigger: AATGGAAAGATCAAAGATGCAGGATATAGTACTTGG...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAATAACTGTGATTTTCTaGACTCTCAGATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKITVIF*TLRSWK
Trigger: CTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTAT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTAGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLVGRML*ITVIFC
Trigger: GCAGAAAATCACAGTTATGCAAAGCATTCTGCCAAC...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAGTCATGAGGAACCTTaGTTTTTCCTGGAGGATCTA +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQSHEEP*FFLEDL
Trigger: TAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAACAAGGACACCGCTTaGCCATGTTCAATGTTGATA +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQNKDTA*PCSMLI
Trigger: TATCAACATTGAACATGGGCAAGCGGTGTCCTTGTT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTAAGTTCTAGAATCTaGAGTTTAGTTAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLSSRI*SLVNLP
Trigger: TGGCAGATTAACTAAACTCCAGATTCTAGAACTTAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCATACTTGCAGTTACTaGCAAATTTCCACCATTGGT +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHHTCSY*QISTIG
Trigger: ACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTGACAGGATCTATTTGTaGATTCTGTTTAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSDRIYL*ILFRVP
Trigger: TGGCACCCTAAACAGAATCCACAAATAGATCCTGTC...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGGACAGGATCTATTTGTaGATTCTGTTTAGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQDRIYL*ILFRVP
Trigger: TGGCACCCTAAACAGAATCCACAAATAGATCCTGTC...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTCTTTTCTAACTTTTTaGCCTCAATGTGTCGTAGTA +
Preference number: 4 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRSFLTF*PQCVVV
Trigger: TACTACGACACATTGAGGCCAAAAAGTTAGAAAAGA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCTTCAGGCACTTCTGTaGATTCATTACTTCCCAAAT +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFELQALL*IHYFPN
Trigger: ATTTGGGAAGTAATGAATTCACAGAAGTGCCTGAAG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTGTGACATTTTTCAATaGACCAATAGTTTCCGGCAG +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFECDIFQ*TNSFRQ
Trigger: CTGCCGGAAACTATTGGTTCATTGAAAAATGTCACA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTATTTCATCTTCTTGTCTaGCTTTGGAGTTACTATCCA +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLFHLLV*LWSYYP
Trigger: TGGATAGTAACTCCAAAGTCAGACAAGAAGATGAAA...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTATATATCCTGCATCTTTaGTCTTTCCATTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLYILHL*SFHYFW
Trigger: CCAGAAGTAATGGAAAGATCAAAGATGCAGGATATA...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR TCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATATATCCTGCATCTTTaGTCTTTCCATTACTTCTGG +
Preference number: 4 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLYILHL*SFHYFW
Trigger: CCAGAAGTAATGGAAAGATCAAAGATGCAGGATATA...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACTGTTCTTCCCACAATaGAGGATTAAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKLFFPQ*RIKTFI
Trigger: AATGAAAGTTTTAATCCTGCATTGTGGGAAGAACAG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTAAGACAACTTCATACTTaGAGTTACTGGCAAATTTCC +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLRQLHT*SYWQIS
Trigger: GGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCT...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCATGGTTAACAATATaGTTCAGGTTTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHSWLTI*FRFPDN
Trigger: GTTGTCTGGAAACCTGAAGCATATTGTTAACCATGA...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACACGGAGAAGAACAGTTaGTGTTATTCTGATTACTGT +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHTEKNS*CYSDYC
Trigger: ACAGTAATCAGAATAACAGCAACTGTTCTTCTCCGT...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACCAAGTACTATATCCTaGATCTTTGATCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKPSTIS*IFDLSI
Trigger: AATGGAAAGATCAAAGATGCAGGATATAGTACTTGG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGC +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSVGRML*ITVIFC
Trigger: GCAGAAAATCACAGTTATGCAAAGCATTCTGCCAAC...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAGGCAACATTTTCAACTaGTTTTCTCTAAGTTCTAGA +
Preference number: 4 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKGNIFN*FSLSSR
Trigger: TCTAGAACTTAGAGAAAACCAGTTGAAAATGTTGCC...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CCA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAATTCTTAAGCTCATCTaGGTATGGTGTTGGATATCT +
Preference number: 4 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLILKLI*VWCWIS
Trigger: AGATATCCAACACCATACCCAGATGAGCTTAAGAAT...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCATACTTGCAGTTACTaGCAAATTTCCACCATTGGT +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEHTCSY*QISTIG
Trigger: ACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR TCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTGATTTGAATCAAACTTaGAAACTGCCTTTGTACCTG +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSDLNQT*KLPLYL
Trigger: CAGGTACAAAGGCAGTTTTCAAGTTTGATTCAAATC...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCTGTTCTTCCCACAATaGAGGATTAAAACTTTCATT +
Preference number: 4 (lower is better)
Translates to: EFTLNVICRTALYLNTLHLFFPQ*RIKTFI
Trigger: AATGAAAGTTTTAATCCTGCATTGTGGGAAGAACAG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR GCA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTCATGGTTAACAATATaGTTCAGGTTTCCAGACAAC +
Preference number: 4 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFESWLTI*FRFPDN
Trigger: GTTGTCTGGAAACCTGAAGCATATTGTTAACCATGA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR GCA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGATAACTGTGATTTTCTaGACTCTCAGATCTTGGAAG +
Preference number: 4 (lower is better)
Translates to: NSHALLLTTACYPNFIIQITVIF*TLRSWK
Trigger: CTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTAT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACTAAGTTCTAGAATCTaGAGTTTAGTTAATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VEFTLNVICRTALYLNTLLSSRI*SLVNLP
Trigger: TGGCAGATTAACTAAACTCCAGATTCTAGAACTTAG...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CCA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTAGCTCTTATTATATCTaGCTCTTCAGGGTTGTGATT +
Preference number: 4 (lower is better)
Translates to: FTLNVICRTALYLNTLHSSSYYI*LFRVVI
Trigger: AATCACAACCCTGAAGAGCCAGATATAATAAGAGCT...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS TCA 90 bp CTGCCTTTGTACCTGACAGTAACTCAGAAGATGAGGAGGCAGCAGTaGACACCTGCAGGGGCTGATCATACAGCAGTGTGGCAGACTTGC +
Preference number: 5 (lower is better)
Translates to: LPLYLTVTQKMRRQQ*TPAGADHTAVWQTC
Trigger: GCAAGTCTGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTTCACTGCTGCCTCCTCATCTTCTGAGTTACTGTCAGGTACAAAGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCCQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTCTCGAATCTCTTGCTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: SALSAALPHRCASLTDLLLESLA*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAG...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCTGCACTCTCAGATCTaGGAAGGCGCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVLHSQI*EGAEEE
Trigger: TTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCAG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCTCGAATCTCTTGCTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLESLA*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCTCGAATCTCTTGCTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHLESLA*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS TCA 90 bp TCACCGAGATTTACAGAAGCCGTTGAAGACACGCTACTCTGTCTCTaGATAGTAGTCCGAGTGACTGCTGGCACTAGTCGGTCATTCGGG +
Preference number: 5 (lower is better)
Translates to: SPRFTEAVEDTLLCL*IVVRVTAGTSRSFG
Trigger: CCCGAATGACCGACTAGTGCCAGCAGTCACTCGGACTACTATTCAGAGACAGAGTAGCGTGTCTTCAACGGCTTCTGTAAATCTCGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp TCCTTCAGTACGCCTTGTGGGGTCACCGAGATTTACAGAAGCCGTTaGAGACACGCTACTCTGTCTCTGAATAGTAGTCCGAGTGACTGC +
Preference number: 5 (lower is better)
Translates to: SFSTPCGVTEIYRSR*RHATLSLNSSPSDC
Trigger: GCAGTCACTCGGACTACTATTCAGAGACAGAGTAGCGTGTCTTCAACGGCTTCTGTAAATCTCGGTGACCCCACAAGGCGTACTGAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTGKFPP*VSASGS
Trigger: TGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCTGCACTCTCAGATCTaGGAAGGCGCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLLHSQI*EGAEEE
Trigger: TTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCAG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCTCTTACTCGAATCTCTaGCTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCSYSNL*LCQFMA
Trigger: GGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGA...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS TCA 90 bp AGTAACTCAGAAGATGAGGAGGCAGCAGTGAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCAGACTTGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SNSEDEEAAVNTCRG*SYSSVADLLLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTTCACTGCTGCCTCCTCATCTTCTGAGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp GGTGTCTTTCACTGTAGCACTGCCACTGTACTGGACATTATATTGTaGGGGACCATACAGGTGAGGTGTAGACTGTGGGCCAGATACTGT +
Preference number: 5 (lower is better)
Translates to: GVFHCSTATVLDIIL*GTIQVRCRLWARYC
Trigger: ACAGTATCTGGCCCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAGTACAGTGGCAGTGCTACAGTGAAAGACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVGKFPP*VSASGS
Trigger: TGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCTGGAGTTCTTCCCATaGAATGTAACTCTCTGTACG +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLEFFP*NVTLCT
Trigger: CGTACAGAGAGTTACATTCAATGGGAAGAACTCCAG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCGTTCAGACCCGACCCTaGTATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCVQTRP*YLVFLK
Trigger: CTTCAAAAAGACCAAATACAAGGGTCGGGTCTGAAC...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp CTATCCACGGGAGTCTGTTTCACGGGAGAACAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGAGACACTGAATCAGACATTCGGGAC +
Preference number: 5 (lower is better)
Translates to: LSTGVCFTGEQSDVS*LLSVLRDTESDIRD
Trigger: GTCCCGAATGTCTGATTCAGTGTCTCTTAATACTGACAGCAGTCAAGACACGTCACTCTGTTCTCCCGTGAAACAGACTCCCGTGGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp GCACTGCCACTGTACTGGACATTATATTGTGGGGGACCATACAGGTaGGGTGTAGACTGTGGGCCAGATACTGTGGCAGCTCTTATTATA +
Preference number: 5 (lower is better)
Translates to: ALPLYWTLYCGGPYR*GVDCGPDTVAALII
Trigger: TATAATAAGAGCTGCCACAGTATCTGGCCCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAGTACAGTGGCAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 90 bp CCTGGGTGGTGCCTCTCTTTCATCTTTGTCTTCATCACATTCAAATaGCACTTGAGCCCGCTGTTTTCTCTGTTCTTCCCACAATGCAGG +
Preference number: 5 (lower is better)
Translates to: PGWCLSFIFVFITFK*HLSPLFSLFFPQCR
Trigger: CCTGCATTGTGGGAAGAACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAAGACAAAGATGAAAGAGAGGCACCACCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 90 bp GCTTCTGACTATGTTCTTCCCATCCACAGCAGATGCGATTTTAACTaGTGCACTTGGCGGCTGAGGGCCATCATCACCAAGAATGTCATA +
Preference number: 5 (lower is better)
Translates to: ASDYVLPIHSRCDFN*CTWRLRAIITKNVI
Trigger: TATGACATTCTTGGTGATGATGGCCCTCAGCCGCCAAGTGCAGCAGTTAAAATCGCATCTGCTGTGGATGGGAAGAACATAGTCAGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp CTGGACATTATATTGTGGGGGACCATACAGGTGAGGTGTAGACTGTaGGCCAGATACTGTGGCAGCTCTTATTATATCTGGCTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: LDIILWGTIQVRCRL*ARYCGSSYYIWLFR
Trigger: CCTGAAGAGCCAGATATAATAAGAGCTGCCACAGTATCTGGCCCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp CGAATCTCTTGCTTTGCCAGTTCATGGCCTTGTCTAGGAGAACAATaGGGATGTGTATATGGAGGCTGGTGGGCCACTTTCAGCATCAAA +
Preference number: 5 (lower is better)
Translates to: RISCFASSWPCLGEQ*GCVYGGWWATFSIK
Trigger: TTTGATGCTGAAAGTGGCCCACCAGCCTCCATATACACATCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAGCAAGAGATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTACCTTAACCCTCCTATaGAGTCTGGTAGATACATTA +
Preference number: 5 (lower is better)
Translates to: SALSAALPHRCASLTDLLTLTLL*SLVDTL
Trigger: TAATGTATCTACCAGACTCAATAGGAGGGTTAAGGT...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVTFKCH*SPLFSL
Trigger: CAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCTGCACTCTCAGATCTaGGAAGGCGCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPLHSQI*EGAEEE
Trigger: TTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCAG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAGTTCAGACCCGACCCTaGTATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTVQTRP*YLVFLK
Trigger: CTTCAAAAAGACCAAATACAAGGGTCGGGTCTGAAC...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGT +
Preference number: 5 (lower is better)
Translates to: SALSAALPHRCASLTDLLCFSNF*ASMCRS
Trigger: ACTACGACACATTGAGGCCAAAAAGTTAGAAAAGCA...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACTCGAATCTCTTGCTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIALESLA*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCTCTTACTCGAATCTCTaGCTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVSYSNL*LCQFMA
Trigger: GGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGA...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHCWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAGAGAGGCTGGCCCATTaGTCCATTACTCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAERLAH*SITQRH
Trigger: ATGCCTTTGAGTAATGGACAAATGGGCCAGCCTCTC...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS GCA 90 bp AGCAGAAGAACTGGCCTTCTGTGGTTCAACCCTACCAGGAGACGGTaGAGTGTCCTCACAAAGACCATTTACCTTATTTATGGACTCCAA +
Preference number: 5 (lower is better)
Translates to: SRRTGLLWFNPTRRR*SVLTKTIYLIYGLQ
Trigger: TTGGAGTCCATAAATAAGGTAAATGGTCTTTGTGAGGACACTGCACCGTCTCCTGGTAGGGTTGAACCACAGAAGGCCAGTTCTTCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACCTTAACCCTCCTATaGAGTCTGGTAGATACATTA +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCTLTLL*SLVDTL
Trigger: TAATGTATCTACCAGACTCAATAGGAGGGTTAAGGT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAATCCAGTTCTTCTATaGACCTTAACCCTCCTATTG +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHNPVLL*TLTLLL
Trigger: CAATAGGAGGGTTAAGGTCAATAGAAGAACTGGATT...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIATFKCH*SPLFSL
Trigger: CAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCATCTGGGTATGGTGTaGGATATCTCTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHHLGMV*DISLSF
Trigger: GAAACTTAAAGAGATATCCAACACCATACCCAGATG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCATCTGGGTATGGTGTaGGATATCTCTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCHLGMV*DISLSF
Trigger: GAAACTTAAAGAGATATCCAACACCATACCCAGATG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: YEIDSSAICLGATSRLTIGKFPP*VSASGS
Trigger: TGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCAGACAACTTCATACTaGCAGTTACTGGCAAATTTC +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCQTTSY*QLLANF
Trigger: GAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCACTCTCTGCAGCACTTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTCTATATCCTGCATCTTaGATCTTTCCATTACTTCTG +
Preference number: 5 (lower is better)
Translates to: SALSAALPHRCASLTDLLLYPAS*IFPLLL
Trigger: CAGAAGTAATGGAAAGATCAAAGATGCAGGATATAG...AAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAAGTGCTGCAGAGAGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAAGCAGTGTGGCAGACTaGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIASSVAD*LLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGG +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCKWYPV*ALTLLW
Trigger: CCATAACAATGTTAGAGCCAATACTGGATACCACTT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCTGGAGTTCTTCCCATaGAATGTAACTCTCTGTACG +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVLEFFP*NVTLCT
Trigger: CGTACAGAGAGTTACATTCAATGGGAAGAACTCCAG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTGCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGT +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHCFSNF*ASMCRS
Trigger: ACTACGACACATTGAGGCCAAAAAGTTAGAAAAGCA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCATGAATCTATCATCTaGGCAACACTCTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVHESII*ATLSWT
Trigger: AGTCCAGGAGAGTGTTGCCAAGATGATAGATTCATG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCTCTTACTCGAATCTCTaGCTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLSYSNL*LCQFMA
Trigger: GGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGA...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCCTGGCTGTAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVLAVVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTACAGCCAG...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp ATCATCATCAGGTCTGAAAGGGTTTCCTCTGCCGCCGACACCTCCTaGTATGCTAAATCCAAGTTCTGGATCCTTTTCTACTCTTACTCG +
Preference number: 5 (lower is better)
Translates to: IIIRSERVSSAADTS*YAKSKFWILFYSYS
Trigger: CGAGTAAGAGTAGAAAAGGATCCAGAACTTGGATTTAGCATATCAGGAGGTGTCGGCGGCAGAGGAAACCCTTTCAGACCTGATGATGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp GGATCCTTTTCTACTCTTACTCGAATCTCTTGCTTTGCCAGTTCATaGCCTTGTCTAGGAGAACAATGGGGATGTGTATATGGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GSFSTLTRISCFASS*PCLGEQWGCVYGGW
Trigger: CCAGCCTCCATATACACATCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGAGTAGAAAAGGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCGCTGAAGGGAATTACTaGATAAGAGAAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVAEGNY*IRESPG
Trigger: TCCAGGACTTTCTCTTATCAAGTAATTCCCTTCAGC...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACAACCTTAACCCTCCTATaGAGTCTGGTAGATACATTA +
Preference number: 5 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTTLTLL*SLVDTL
Trigger: TAATGTATCTACCAGACTCAATAGGAGGGTTAAGGT...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACTGTGTCTGTTTCTTTTaGAAGAGGTATCAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHCVCFF*KRYQRF
Trigger: AAACCTCTGATACCTCTTCAAAAAGAAACAGACACA...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCATCCTTATTTACAACTaGCTGATCTTCATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCILIYN*LIFMLL
Trigger: AAGCAGCATGAAGATCAGCAAGTTGTAAATAAGGAT...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACACAGACAACTTCATACTaGCAGTTACTGGCAAATTTC +
Preference number: 5 (lower is better)
Translates to: AVPVSQTCFGFLAPCTLTQTTSY*QLLANF
Trigger: GAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTG...TGTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCTATATCCTGCATCTTaGATCTTTCCATTACTTCTG +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLYPAS*IFPLLL
Trigger: CAGAAGTAATGGAAAGATCAAAGATGCAGGATATAG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACTGGAGTTCTTCCCATaGAATGTAACTCTCTGTACG +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIALEFFP*NVTLCT
Trigger: CGTACAGAGAGTTACATTCAATGGGAAGAACTCCAG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAGTTCAGACCCGACCCTaGTATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAVQTRP*YLVFLK
Trigger: CTTCAAAAAGACCAAATACAAGGGTCGGGTCTGAAC...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCGTTCAGACCCGACCCTaGTATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLVQTRP*YLVFLK
Trigger: CTTCAAAAAGACCAAATACAAGGGTCGGGTCTGAAC...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACATGAATCTATCATCTaGGCAACACTCTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAHESII*ATLSWT
Trigger: AGTCCAGGAGAGTGTTGCCAAGATGATAGATTCATG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCCCCATCGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: FPIAVPVSQTCFGFLAPCLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...GCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCGATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp CGCTGTGCCAGTCTCACAGACTTGCTTTGGTTTCCTAGCTCCATGCACACTCACCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: RCASLTDLLWFPSSMHTHLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...GTGAGTGTGCATGGAGCTAGGAAACCAAAGCAAGTCTGTGAGACTGGCACAGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTGAGAGGCTGGCCCATTaGTCCATTACTCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPERLAH*SITQRH
Trigger: ATGCCTTTGAGTAATGGACAAATGGGCCAGCCTCTC...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS CCA 90 bp AATGTAACTCTCTGTACGATAAGTAATCTCCTTCAGTACGCCTTGTaGGGTCACCGAGATTTACAGAAGCCGTTGAAGACACGCTACTCT +
Preference number: 5 (lower is better)
Translates to: NVTLCTISNLLQYAL*GHRDLQKPLKTRYS
Trigger: AGAGTAGCGTGTCTTCAACGGCTTCTGTAAATCTCGGTGACCCCACAAGGCGTACTGAAGGAGATTACTTATCGTACAGAGAGTTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAAAGGTGAAAATCTCTTaGGGAACTTGTTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAKVKIS*GTCSKL
Trigger: CAGCTTGGAACAAGTTCCCAAAGAGATTTTCACCTT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAAGGTGAAAATCTCTTaGGGAACTTGTTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLKVKIS*GTCSKL
Trigger: CAGCTTGGAACAAGTTCCCAAAGAGATTTTCACCTT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCACCTTAACCCTCCTATaGAGTCTGGTAGATACATTA +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVTLTLL*SLVDTL
Trigger: TAATGTATCTACCAGACTCAATAGGAGGGTTAAGGT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCAATCCAGTTCTTCTATaGACCTTAACCCTCCTATTG +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVNPVLL*TLTLLL
Trigger: CAATAGGAGGGTTAAGGTCAATAGAAGAACTGGATT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPTFKCH*SPLFSL
Trigger: CAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGT...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACTGCACTCTCAGATCTaGGAAGGCGCTGAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKLHSQI*EGAEEE
Trigger: TTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCAG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRCQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYCQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTCTTACTCGAATCTCTaGCTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPSYSNL*LCQFMA
Trigger: GGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCATGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIACWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp AACTTTTTGGCCTCAATGTGTCGTAGTACTTGTTCCCGCCAGTCATaGGGAACCTTGCTTTTTCCTGGAGGATCTAACAGAGAATGTTCA +
Preference number: 5 (lower is better)
Translates to: NFLASMCRSTCSRQS*GTLLFPGGSNRECS
Trigger: TGAACATTCTCTGTTAGATCCTCCAGGAAAAAGCAAGGTTCCTCATGACTGGCGGGAACAAGTACTACGACACATTGAGGCCAAAAAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 90 bp AGAGAAATTCATGTTGGCAGAATGCTTTGCATAACTGTGATTTTCTaGACTCTCAGATCTTGGAAGGCGCTGAGGAGGAAAACTGACAGG +
Preference number: 5 (lower is better)
Translates to: REIHVGRMLCITVIF*TLRSWKALRRKTDR
Trigger: CCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTATGCAAAGCATTCTGCCAACATGAATTTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp GGCAGAATGCTTTGCATAACTGTGATTTTCTGCACTCTCAGATCTTaGAAGGCGCTGAGGAGGAAAACTGACAGGATCTATTTGTGGATT +
Preference number: 5 (lower is better)
Translates to: GRMLCITVIFCTLRS*KALRRKTDRIYLWI
Trigger: AATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTATGCAAAGCATTCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCTGAAGGGAATTACTaGATAAGAGAAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: YEIDSSAICLGATSRLTIAEGNY*IRESPG
Trigger: TCCAGGACTTTCTCTTATCAAGTAATTCCCTTCAGC...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAATCCAGTTCTTCTATaGACCTTAACCCTCCTATTG +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLNPVLL*TLTLLL
Trigger: CAATAGGAGGGTTAAGGTCAATAGAAGAACTGGATT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCCATCTGGGTATGGTGTaGGATATCTCTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLHLGMV*DISLSF
Trigger: GAAACTTAAAGAGATATCCAACACCATACCCAGATG...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTGCCTTGCATACAGTCATCCTTATTTACAACTaGCTGATCTTCATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SAICLGATSRLTIALHTVILIYN*LIFMLL
Trigger: AAGCAGCATGAAGATCAGCAAGTTGTAAATAAGGAT...GACTGTATGCAAGGCAATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYGKFPP*VSASGS
Trigger: TGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCC...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCACAGACAACTTCATACTaGCAGTTACTGGCAAATTTC +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAQTTSY*QLLANF
Trigger: GAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTG...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGG +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAKWYPV*ALTLLW
Trigger: CCATAACAATGTTAGAGCCAATACTGGATACCACTT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTCTGGCTGTAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPLAVVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTACAGCCAG...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACGAGAGGCTGGCCCATTaGTCCATTACTCAAAGGCAT +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYERLAH*SITQRH
Trigger: ATGCCTTTGAGTAATGGACAAATGGGCCAGCCTCTC...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS TCA 90 bp TCAAGGAAAGCATCATTCAGATATAACTGGGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGCTTAGAAATAGGGTTCACACTAGCC +
Preference number: 5 (lower is better)
Translates to: SRKASFRYNWVRFSS*ENPSGSLEIGFTLA
Trigger: GGCTAGTGTGAACCCTATTTCTAAGCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAACCCAGTTATATCTGAATGATGCTTTCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYTFKCH*SPLFSL
Trigger: CAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCATCTGGGTATGGTGTaGGATATCTCTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: YEIDSSAICLGATSRLTIHLGMV*DISLSF
Trigger: GAAACTTAAAGAGATATCCAACACCATACCCAGATG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCAGTATGCACATAGCAATCCTTATTTACAACTaGCTGATCTTCATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SEPTSINFIYPLLSMHIAILIYN*LIFMLL
Trigger: AAGCAGCATGAAGATCAGCAAGTTGTAAATAAGGAT...TGCTATGTGCATACTGAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISGKFPP*VSASGS
Trigger: TGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCC...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATAGCAGTGTGGCAGACTaGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYSSVAD*LLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCT...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: EFTLNVICRTALYLNTLHCQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TCACTTTACCAAGGCAACACCAGGCCAACAAAACCAAGAGGCTTTCTAAAACCTTGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: SLYQGNTRPTKPRGFLKPCWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...AGGTTTTAGAAAGCCTCTTGGTTTTGTTGGCCTGGTGTTGCCTTGGTAAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATCTGGCCTTGAAAAGTGAACCCACCAGCATCAACTTCATCTACCCACTCCTCATCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGT +
Preference number: 5 (lower is better)
Translates to: NLALKSEPTSINFIYPLLIFSNF*ASMCRS
Trigger: ACTACGACACATTGAGGCCAAAAAGTTAGAAAAGAT...GAGGAGTGGGTAGATGAAGTTGATGCTGGTGGGTTCACTTTTCAAGGCCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000188997.7
CDS GCA 90 bp ATCATGGTTAACAATATGCTTCAGGTTTCCAGACAACTTCATACTTaGAGTTACTGGCAAATTTCCACCATTGGTCTCAGCTTCAGGCTC +
Preference number: 5 (lower is better)
Translates to: IMVNNMLQVSRQLHT*SYWQISTIGLSFRL
Trigger: GAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTGGAAACCTGAAGCATATTGTTAACCATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp GGCACTTCTGTGAATTCATTACTTCCCAAATCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTTTTAGGCAACATTTTCAACTGGTTT +
Preference number: 5 (lower is better)
Translates to: GTSVNSLLPKSSLSS*VSLFMVLGNIFNWF
Trigger: AAACCAGTTGAAAATGTTGCCTAAAACCATGAATAGACTGACCCAGCTGGAAAGGCTGGATTTGGGAAGTAATGAATTCACAGAAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTTGTGTCTGTTTCTTTTaGAAGAGGTATCAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: YEIDSSAICLGATSRLTICVCFF*KRYQRF
Trigger: AAACCTCTGATACCTCTTCAAAAAGAAACAGACACA...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAAGCAGTGTGGCAGACTaGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISSSVAD*LLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCT...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGG +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFECQFMA*SRRTMG
Trigger: CCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGAGATAGACAGCTCTGCCATCTGTCTCGGGGCTACATCAAGGCTAACTATTCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: YEIDSSAICLGATSRLTILQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...AATAGTTAGCCTTGATGTAGCCCCGAGACAGATGGCAGAGCTGTCTATCTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATCTGGCTGTAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYLAVVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTACAGCCAG...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp ATTGTGATCTGCAGCAAATGTTCTCATGTTTGTGAGCTGGCCAATTaGGGAAGGCAAAGCTTCAATTTCATTGAAACTGCAATCCAGTTC +
Preference number: 5 (lower is better)
Translates to: IVICSKCSHVCELAN*GRQSFNFIETAIQF
Trigger: GAACTGGATTGCAGTTTCAATGAAATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAGAACATTTGCTGCAGATCACAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACAAGGTGAAAATCTCTTaGGGAACTTGTTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYKVKIS*GTCSKL
Trigger: CAGCTTGGAACAAGTTCCCAAAGAGATTTTCACCTT...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGAAGGTGAAAATCTCTTaGGGAACTTGTTCCAAGCTG +
Preference number: 5 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRKVKIS*GTCSKL
Trigger: CAGCTTGGAACAAGTTCCCAAAGAGATTTTCACCTT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATGCTGAAGGGAATTACTaGATAAGAGAAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYAEGNY*IRESPG
Trigger: TCCAGGACTTTCTCTTATCAAGTAATTCCCTTCAGC...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTAACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTG +
Preference number: 5 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLTFKCH*SPLFSL
Trigger: CAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGT...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: FTLNVICRTALYLNTLHSGKFPP*VSASGS
Trigger: TGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCC...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACAGCAGTGTGGCAGACTaGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: EFTLNVICRTALYLNTLHSSVAD*LLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCT...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGCTCGAATCTCTTGCTTaGCCAGTTCATGGCCTTGTC +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQLESLA*PVHGLV
Trigger: GACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAG...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYCWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACTGCTGGTCCTTCAGGTaGTACCCTTGTTACAAATAT +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYCWSFR*YPCYKY
Trigger: ATATTTGTAACAAGGGTACAACCTGAAGGACCAGCA...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACTGGCTGTAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKLAVVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTACAGCCAG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 90 bp CTCTTATTATATCTGGCTCTTCAGGGTTGTGATTTGAATCAAACTTaGAAACTGCCTTTGTACCTGACAGTAACTCAGAAGATGAGGAGG +
Preference number: 5 (lower is better)
Translates to: LLLYLALQGCDLNQT*KLPLYLTVTQKMRR
Trigger: CCTCCTCATCTTCTGAGTTACTGTCAGGTACAAAGGCAGTTTTCAAGTTTGATTCAAATCACAACCCTGAAGAGCCAGATATAATAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 90 bp TCTAACATTGTTATGGTTAGAGAAATTCATGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGCACTCTCAGATCTTGGAAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SNIVMVREIHVGRML*ITVIFCTLRSWKAL
Trigger: CAGCGCCTTCCAAGATCTGAGAGTGCAGAAAATCACAGTTATGCAAAGCATTCTGCCAACATGAATTTCTCTAACCATAACAATGTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 90 bp TTCCAGACAACTTCATACTTGCAGTTACTGGCAAATTTCCACCATTaGTCTCAGCTTCAGGCTCACTCATTTTCTGTACAGAATTCATAT +
Preference number: 5 (lower is better)
Translates to: FQTTSYLQLLANFHH*SQLQAHSFSVQNSY
Trigger: ATATGAATTCTGTACAGAAAATGAGTGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAGCTGAAGGGAATTACTaGATAAGAGAAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKAEGNY*IRESPG
Trigger: TCCAGGACTTTCTCTTATCAAGTAATTCCCTTCAGC...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACACCTTAACCCTCCTATaGAGTCTGGTAGATACATTA +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYTLTLL*SLVDTL
Trigger: TAATGTATCTACCAGACTCAATAGGAGGGTTAAGGT...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAGCAGTGTGGCAGACTaGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQSSVAD*LLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGAGCAGTGTGGCAGACTaGCTTCTGACTATGTTCTTC +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFESSVAD*LLTMFF
Trigger: GAAGAACATAGTCAGAAGCAAGTCTGCCACACTGCT...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGG +
Preference number: 5 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRKWYPV*ALTLLW
Trigger: CCATAACAATGTTAGAGCCAATACTGGATACCACTT...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTGCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGT +
Preference number: 5 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRCFSNF*ASMCRS
Trigger: ACTACGACACATTGAGGCCAAAAAGTTAGAAAAGCA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp GTCCAAATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTACATGAATCTATCATCTaGGCAACACTCTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: VQIAMHYFLPLHVTQISLHESII*ATLSWT
Trigger: AGTCCAGGAGAGTGTTGCCAAGATGATAGATTCATG...TAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATTTGGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTCTTACTCGAATCTCTaGCTTTGCCAGTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFESYSNL*LCQFMA
Trigger: GGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACCTTACAGCAGTAAGATaGGAATTAAAGGACCTTGAC +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYLTAVR*ELKDLD
Trigger: GTCAAGGTCCTTTAATTCCAATCTTACTGCTGTAAG...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACGCTGAAGGGAATTACTaGATAAGAGAAAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: EFTLNVICRTALYLNTLHAEGNY*IRESPG
Trigger: TCCAGGACTTTCTCTTATCAAGTAATTCCCTTCAGC...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAAATCCAGTTCTTCTATaGACCTTAACCCTCCTATTG +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKNPVLL*TLTLLL
Trigger: CAATAGGAGGGTTAAGGTCAATAGAAGAACTGGATT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGTGTGTCTGTTTCTTTTaGAAGAGGTATCAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRCVCFF*KRYQRF
Trigger: AAACCTCTGATACCTCTTCAAAAAGAAACAGACACA...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCAGTAATGTACATCCTTATTTACAACTaGCTGATCTTCATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SVQWFFPLTTRSIISVMYILIYN*LIFMLL
Trigger: AAGCAGCATGAAGATCAGCAAGTTGTAAATAAGGAT...GTACATTACTGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAACAGACAACTTCATACTaGCAGTTACTGGCAAATTTC +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKQTTSY*QLLANF
Trigger: GAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTG...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GTCTTTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATCTATATCCTGCATCTTaGATCTTTCCATTACTTCTG +
Preference number: 5 (lower is better)
Translates to: VFFIFCTVVLPSNHKVHYLYPAS*IFPLLL
Trigger: CAGAAGTAATGGAAAGATCAAAGATGCAGGATATAG...ATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TATGCACATAGCAAAGCCAACACTTCAAATCTCTTACCCACAAGGAAAAACAGGCTATATCCTGCATCTTaGATCTTTCCATTACTTCTG +
Preference number: 5 (lower is better)
Translates to: YAHSKANTSNLLPTRKNRLYPAS*IFPLLL
Trigger: CAGAAGTAATGGAAAGATCAAAGATGCAGGATATAG...CCTGTTTTTCCTTGTGGGTAAGAGATTTGAAGTGTTGGCTTTGCTATGTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAAAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGG +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKKWYPV*ALTLLW
Trigger: CCATAACAATGTTAGAGCCAATACTGGATACCACTT...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGCTGGAGTTCTTCCCATaGAATGTAACTCTCTGTACG +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQLEFFP*NVTLCT
Trigger: CGTACAGAGAGTTACATTCAATGGGAAGAACTCCAG...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGGTTCAGACCCGACCCTaGTATTTGGTCTTTTTGAAG +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEVQTRP*YLVFLK
Trigger: CTTCAAAAAGACCAAATACAAGGGTCGGGTCTGAAC...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCATGAATCTATCATCTaGGCAACACTCTCCTGGACT +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEHESII*ATLSWT
Trigger: AGTCCAGGAGAGTGTTGCCAAGATGATAGATTCATG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCTGGCTGTAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFELAVVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTACAGCCAG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACTCTCTGGCTGTAGTAATTTaGATGCTGGTCCTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: FTLNVICRTALYLNTLHSLAVVI*MLVLQV
Trigger: AACCTGAAGGACCAGCATCAAAATTACTACAGCCAG...AGAGTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp TTTTCATCTTCTGTACAGTGGTTCTTCCCTCTAACCACAAGGTCCATTATTTCACTCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGT +
Preference number: 5 (lower is better)
Translates to: FSSSVQWFFPLTTRSIISLFSNF*ASMCRS
Trigger: ACTACGACACATTGAGGCCAAAAAGTTAGAAAAGAG...TGAAATAATGGACCTTGTGGTTAGAGGGAAGAACCACTGTACAGAAGATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS TCA 90 bp TTCGCATCATCCTTTTTATTATTACTAAGTGCTACAACTTTGGGCTaGTTAATCGAGGATTCAATTAATGGAGGTCGCATCTCTGCCATT +
Preference number: 5 (lower is better)
Translates to: FASSFLLLLSATTLG*LIEDSINGGRISAI
Trigger: AATGGCAGAGATGCGACCTCCATTAATTGAATCCTCGATTAATCAGCCCAAAGTTGTAGCACTTAGTAATAATAAAAAGGATGATGCGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTCTTGTATTCCATTTTaGCTGACATCCAGTTCCCTG +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFESCIPF*LTSSSL
Trigger: CAGGGAACTGGATGTCAGCAAAAATGGAATACAAGA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp TCGGGACTTCATAGTATGAGAAATGCGTGGACATGCATCTACATTAGAGTTAAATGTGTCTGTTTCTTTTaGAAGAGGTATCAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SGLHSMRNAWTCIYIRVKCVCFF*KRYQRF
Trigger: AAACCTCTGATACCTCTTCAAAAAGAAACAGACACA...TTTAACTCTAATGTAGATGCATGTCCACGCATTTCTCATACTATGAAGTCCCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCATCTGGGTATGGTGTaGGATATCTCTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: EFTLNVICRTALYLNTLHHLGMV*DISLSF
Trigger: GAAACTTAAAGAGATATCCAACACCATACCCAGATG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp GAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACACCAGACAACTTCATACTaGCAGTTACTGGCAAATTTC +
Preference number: 5 (lower is better)
Translates to: EFTLNVICRTALYLNTLHQTTSY*QLLANF
Trigger: GAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTG...GTGTAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGACCTTAACCCTCCTATaGAGTCTGGTAGATACATTA +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFETLTLL*SLVDTL
Trigger: TAATGTATCTACCAGACTCAATAGGAGGGTTAAGGT...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGAATCCAGTTCTTCTATaGACCTTAACCCTCCTATTG +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFENPVLL*TLTLLL
Trigger: CAATAGGAGGGTTAAGGTCAATAGAAGAACTGGATT...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGCATCTGGGTATGGTGTaGGATATCTCTTTAAGTTTC +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQHLGMV*DISLSF
Trigger: GAAACTTAAAGAGATATCCAACACCATACCCAGATG...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCAGACAACTTCATACTaGCAGTTACTGGCAAATTTC +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFEQTTSY*QLLANF
Trigger: GAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGG +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQKWYPV*ALTLLW
Trigger: CCATAACAATGTTAGAGCCAATACTGGATACCACTT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp GTGGAGTTCACATTGAATGTTATCTGTAGAACAGCCCTTTATCTGAACACTTTACTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: VEFTLNVICRTALYLNTLLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...TAAAGTGTTCAGATAAAGGGCTGTTCTACAGATAACATTCAATGTGAACTCCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCTTACAGCAGTAAGATaGGAATTAAAGGACCTTGAC +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFELTAVR*ELKDLD
Trigger: GTCAAGGTCCTTTAATTCCAATCTTACTGCTGTAAG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS TCA 90 bp GACTCTTCATTAGTCTCTTCATCTTTTAATCTATGTACAATGGTTTaGACAGTCTTGACCATATTCTTAAGCTCATCTGGGTATGGTGTT +
Preference number: 5 (lower is better)
Translates to: DSSLVSSSFNLCTMV*TVLTIFLSSSGYGV
Trigger: AACACCATACCCAGATGAGCTTAAGAATATGGTCAAGACTGTTCAAACCATTGTACATAGATTAAAAGATGAAGAGACTAATGAAGAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGTGTGTCTGTTTCTTTTaGAAGAGGTATCAGAGGTTT +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFECVCFF*KRYQRF
Trigger: AAACCTCTGATACCTCTTCAAAAAGAAACAGACACA...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGATCCTTATTTACAACTaGCTGATCTTCATGCTGCTT +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQILIYN*LIFMLL
Trigger: AAGCAGCATGAAGATCAGCAAGTTGTAAATAAGGAT...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGCTATATCCTGCATCTTaGATCTTTCCATTACTTCTG +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQLYPAS*IFPLLL
Trigger: CAGAAGTAATGGAAAGATCAAAGATGCAGGATATAG...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AATAGCCATGCATTACTTCTTACCACTGCATGTTACCCAAATTTCATTATACAGCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: NSHALLLTTACYPNFIIQLQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...CTGTATAATGAAATTTGGGTAACATGCAGTGGTAAGAAGTAATGCATGGCTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS-3UTR CAA 90 bp AACCACAAGGTCCATTATTTCAGTAATGTACAAGTTTCAAACCAACAGTTTGAGCTTCAGGTTGTACCCTaGTTACAAATATACCATCAT +
Preference number: 5 (lower is better)
Translates to: NHKVHYFSNVQVSNQQFELQVVP*LQIYHH
Trigger: ATGATGGTATATTTGTAACAAGGGTACAACCTGAAG...CTCAAACTGTTGGTTTGAAACTTGTACATTACTGAAATAATGGACCTTGTGGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 72 bp GGGCACTCTGAGGCCTGGATGTATTTGGGCCATCGATaGTGTACGCTCGTGCAGAAAGAGGTCTCTGTGATC +
Preference number: 6 (lower is better)
Translates to: GHSEAWMYLGHR*CTLVQKEVSVI
Trigger: GATCACAGAGACCTCTTTCTGCACGAGCGTACAGCATCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp AATAGAGGGACGGGCACTCTGAGGCCTGGATGTATTTaGGCCATCGATGCTGTACGCTCGTGCAGAAAGAGG +
Preference number: 6 (lower is better)
Translates to: NRGTGTLRPGCI*AIDAVRSCRKR
Trigger: CCTCTTTCTGCACGAGCGTACAGCATCGATGGCCCAAATACATCCAGGCCTCAGAGTGCCCGTCCCTCTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp GAAGATGAGGAGGCAGCAGTGAACACCTGCAGGGGCTaGTCATACAGCAGTGTGGCAGACTTGCTTCTGACT +
Preference number: 6 (lower is better)
Translates to: EDEEAAVNTCRG*SYSSVADLLLT
Trigger: AGTCAGAAGCAAGTCTGCCACACTGCTGTATGATCAGCCCCTGCAGGTGTTCACTGCTGCCTCCTCATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp CACTGTAGCACTGCCACTGTACTGGACATTATATTGTaGGGGACCATACAGGTGAGGTGTAGACTGTGGGCC +
Preference number: 6 (lower is better)
Translates to: HCSTATVLDIIL*GTIQVRCRLWA
Trigger: GGCCCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAGTACAGTGGCAGTGCTACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp CTGTACTGGACATTATATTGTGGGGGACCATACAGGTaGGGTGTAGACTGTGGGCCAGATACTGTGGCAGCT +
Preference number: 6 (lower is better)
Translates to: LYWTLYCGGPYR*GVDCGPDTVAA
Trigger: AGCTGCCACAGTATCTGGCCCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp ACGCCTTGTGGGGTCACCGAGATTTACAGAAGCCGTTaGAGACACGCTACTCTGTCTCTGAATAGTAGTCCG +
Preference number: 6 (lower is better)
Translates to: TPCGVTEIYRSR*RHATLSLNSSP
Trigger: CGGACTACTATTCAGAGACAGAGTAGCGTGTCTTCAACGGCTTCTGTAAATCTCGGTGACCCCACAAGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 72 bp TATGTTCTTCCCATCCACAGCAGATGCGATTTTAACTaGTGCACTTGGCGGCTGAGGGCCATCATCACCAAG +
Preference number: 6 (lower is better)
Translates to: YVLPIHSRCDFN*CTWRLRAIITK
Trigger: CTTGGTGATGATGGCCCTCAGCCGCCAAGTGCAGCAGTTAAAATCGCATCTGCTGTGGATGGGAAGAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp TGCTTTGCCAGTTCATGGCCTTGTCTAGGAGAACAATaGGGATGTGTATATGGAGGCTGGTGGGCCACTTTC +
Preference number: 6 (lower is better)
Translates to: CFASSWPCLGEQ*GCVYGGWWATF
Trigger: GAAAGTGGCCCACCAGCCTCCATATACACATCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS CAA 90 bp CAAGGTGTCTTTCACTGTAGCACTGCCACTGTACTGGACATTATATaGTGGGGGACCATACAGGTGAGGTGTAGACTGTGGGCCAGATAC +
Preference number: 6 (lower is better)
Translates to: QGVFHCSTATVLDII*WGTIQVRCRLWARY
Trigger: GTATCTGGCCCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAGTACAGTGGCAGTGCTACAGTGAAAGACACCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp CCTGGACTGGATGTCTGCGGATGCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGTACTTGTTCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: PGLDVCGCFSNF*ASMCRSTCSRQ
Trigger: CTGGCGGGAACAAGTACTACGACACATTGAGGCCAAAAAGTTAGAAAAGCATCCGCAGACATCCAGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS TCA 72 bp ACTATCCACGGGAGTCTGTTTCACGGGAGAACAGAGTaGCGTGTCTTGACTGCTGTCAGTATTAAGAGACAC +
Preference number: 6 (lower is better)
Translates to: TIHGSLFHGRTE*RVLTAVSIKRH
Trigger: GTGTCTCTTAATACTGACAGCAGTCAAGACACGTCACTCTGTTCTCCCGTGAAACAGACTCCCGTGGATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp CTGGACTGGATGTCTGCGGATGCTTTTCTAACTTTTTaGCCTCAATGTGTCGTAGTACTTGTTCCCGCCAGT +
Preference number: 6 (lower is better)
Translates to: LDWMSADAFLTF*PQCVVVLVPAS
Trigger: ACTGGCGGGAACAAGTACTACGACACATTGAGGCCAAAAAGTTAGAAAAGCATCCGCAGACATCCAGTCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
CDS CAA 72 bp TTTCACTGTAGCACTGCCACTGTACTGGACATTATATaGTGGGGGACCATACAGGTGAGGTGTAGACTGTGG +
Preference number: 6 (lower is better)
Translates to: FHCSTATVLDII*WGTIQVRCRLW
Trigger: CCACAGTCTACACCTCACCTGTATGGTCCCCCACAATATAATGTCCAGTACAGTGGCAGTGCTACAGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 90 bp CTCAGATCTTGGAAGGCGCTGAGGAGGAAAACTGACAGGATCTATTaGTGGATTCTGTTTAGGGTGCCACAAGGTGTCTTTCACTGTAGC +
Preference number: 6 (lower is better)
Translates to: LRSWKALRRKTDRIY*WILFRVPQGVFHCS
Trigger: GCTACAGTGAAAGACACCTTGTGGCACCCTAAACAGAATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGCGCCTTCCAAGATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp GGAGTCTGTTTCACGGGAGAACAGAGTGACGTGTCTTaGCTGCTGTCAGTATTAAGAGACACTGAATCAGAC +
Preference number: 6 (lower is better)
Translates to: GVCFTGEQSDVS*LLSVLRDTESD
Trigger: GTCTGATTCAGTGTCTCTTAATACTGACAGCAGTCAAGACACGTCACTCTGTTCTCCCGTGAAACAGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp GTACCCTTGTTACAAATATACCATCATCATCAGGTCTaGAAGGGTTTCCTCTGCCGCCGACACCTCCTGATA +
Preference number: 6 (lower is better)
Translates to: VPLLQIYHHHQV*KGFLCRRHLLI
Trigger: TATCAGGAGGTGTCGGCGGCAGAGGAAACCCTTTCAGACCTGATGATGATGGTATATTTGTAACAAGGGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 72 bp ACTGGCCTTCTGTGGTTCAACCCTACCAGGAGACGGTaGAGTGTCCTCACAAAGACCATTTACCTTATTTAT +
Preference number: 6 (lower is better)
Translates to: TGLLWFNPTRRR*SVLTKTIYLIY
Trigger: ATAAATAAGGTAAATGGTCTTTGTGAGGACACTGCACCGTCTCCTGGTAGGGTTGAACCACAGAAGGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp CTCTGTACGATAAGTAATCTCCTTCAGTACGCCTTGTaGGGTCACCGAGATTTACAGAAGCCGTTGAAGACA +
Preference number: 6 (lower is better)
Translates to: LCTISNLLQYAL*GHRDLQKPLKT
Trigger: TGTCTTCAACGGCTTCTGTAAATCTCGGTGACCCCACAAGGCGTACTGAAGGAGATTACTTATCGTACAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp ATGGCCTTGTCTAGGAGAACAATGGGGATGTGTATATaGAGGCTGGTGGGCCACTTTCAGCATCAAATAATC +
Preference number: 6 (lower is better)
Translates to: MALSRRTMGMCI*RLVGHFQHQII
Trigger: GATTATTTGATGCTGAAAGTGGCCCACCAGCCTCCATATACACATCCCCATTGTTCTCCTAGACAAGGCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS CAA 72 bp TGGAAGGCGCTGAGGAGGAAAACTGACAGGATCTATTaGTGGATTCTGTTTAGGGTGCCACAAGGTGTCTTT +
Preference number: 6 (lower is better)
Translates to: WKALRRKTDRIY*WILFRVPQGVF
Trigger: AAAGACACCTTGTGGCACCCTAAACAGAATCCACAAATAGATCCTGTCAGTTTTCCTCCTCAGCGCCTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp ACTCTCTGTACGATAAGTAATCTCCTTCAGTACGCCTaGTGGGGTCACCGAGATTTACAGAAGCCGTTGAAG +
Preference number: 6 (lower is better)
Translates to: TLCTISNLLQYA*WGHRDLQKPLK
Trigger: CTTCAACGGCTTCTGTAAATCTCGGTGACCCCACAAGGCGTACTGAAGGAGATTACTTATCGTACAGAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 90 bp TTGAATGTAACTCTCTGTACGATAAGTAATCTCCTTCAGTACGCCTaGTGGGGTCACCGAGATTTACAGAAGCCGTTGAAGACACGCTAC +
Preference number: 6 (lower is better)
Translates to: LNVTLCTISNLLQYA*WGHRDLQKPLKTRY
Trigger: GTAGCGTGTCTTCAACGGCTTCTGTAAATCTCGGTGACCCCACAAGGCGTACTGAAGGAGATTACTTATCGTACAGAGAGTTACATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 72 bp AAACTGACAGGATCTATTTGTGGATTCTGTTTAGGGTaGCACAAGGTGTCTTTCACTGTAGCACTGCCACTG +
Preference number: 6 (lower is better)
Translates to: KLTGSICGFCLG*HKVSFTVALPL
Trigger: CAGTGGCAGTGCTACAGTGAAAGACACCTTGTGGCACCCTAAACAGAATCCACAAATAGATCCTGTCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp TCTTACTCGAATCTCTTGCTTTGCCAGTTCATGGCCTaGTCTAGGAGAACAATGGGGATGTGTATATGGAGG +
Preference number: 6 (lower is better)
Translates to: SYSNLLLCQFMA*SRRTMGMCIWR
Trigger: CCTCCATATACACATCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS CAA 90 bp CCATGCCTGGCTGGGGCAAGTCTCTGTTGTAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGGTTAGAGAAATTCATGTTGGCAGAA +
Preference number: 6 (lower is better)
Translates to: PCLAGASLCCKWYPV*ALTLLWLEKFMLAE
Trigger: TTCTGCCAACATGAATTTCTCTAACCATAACAATGTTAGAGCCAATACTGGATACCACTTACAACAGAGACTTGCCCCAGCCAGGCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 90 bp TGGTGCCTCTCTTTCATCTTTGTCTTCATCACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTGTTCTTCCCACAATGCAGGATTAAA +
Preference number: 6 (lower is better)
Translates to: WCLSFIFVFITFKCH*SPLFSLFFPQCRIK
Trigger: TTTAATCCTGCATTGTGGGAAGAACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAAGACAAAGATGAAAGAGAGGCACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp GCATCATTCAGATATAACTGGGTTAGGTTTAGCAGCTaGGAAAACCCATCAGGGAGCTTAGAAATAGGGTTC +
Preference number: 6 (lower is better)
Translates to: ASFRYNWVRFSS*ENPSGSLEIGF
Trigger: GAACCCTATTTCTAAGCTCCCTGATGGGTTTTCTCAGCTGCTAAACCTAACCCAGTTATATCTGAATGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp ACTTCATACTTGCAGTTACTGGCAAATTTCCACCATTaGTCTCAGCTTCAGGCTCACTCATTTTCTGTACAG +
Preference number: 6 (lower is better)
Translates to: TSYLQLLANFHH*SQLQAHSFSVQ
Trigger: CTGTACAGAAAATGAGTGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp TCTACTCTTACTCGAATCTCTTGCTTTGCCAGTTCATaGCCTTGTCTAGGAGAACAATGGGGATGTGTATAT +
Preference number: 6 (lower is better)
Translates to: STLTRISCFASS*PCLGEQWGCVY
Trigger: ATATACACATCCCCATTGTTCTCCTAGACAAGGCCATGAACTGGCAAAGCAAGAGATTCGAGTAAGAGTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS CAA 72 bp TCTTTCATCTTTGTCTTCATCACATTCAAATGCCACTaGAGCCCGCTGTTTTCTCTGTTCTTCCCACAATGC +
Preference number: 6 (lower is better)
Translates to: SFIFVFITFKCH*SPLFSLFFPQC
Trigger: GCATTGTGGGAAGAACAGAGAAAACAGCGGGCTCAAGTGGCATTTGAATGTGATGAAGACAAAGATGAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp TTAAAGGACCTTGACAGCATACTCTTTTCTAACTTTTaGGCCTCAATGTGTCGTAGTACTTGTTCCCGCCAG +
Preference number: 6 (lower is better)
Translates to: LKDLDSILFSNF*ASMCRSTCSRQ
Trigger: CTGGCGGGAACAAGTACTACGACACATTGAGGCCAAAAAGTTAGAAAAGAGTATGCTGTCAAGGTCCTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000169083.8
ENSMUST00000191275.7
CDS TCA 72 bp ACATTTTTCAATGAACCAATAGTTTCCGGCAGCTGCTaGAGGGAATTACTTGATAAGAGAAAGTCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: TFFNEPIVSGSC*RELLDKRKSWR
Trigger: CCTCCAGGACTTTCTCTTATCAAGTAATTCCCTTCAGCAGCTGCCGGAAACTATTGGTTCATTGAAAAATGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp GTGAATTCATTACTTCCCAAATCCAGCCTTTCCAGCTaGGTCAGTCTATTCATGGTTTTAGGCAACATTTTC +
Preference number: 6 (lower is better)
Translates to: VNSLLPKSSLSS*VSLFMVLGNIF
Trigger: GAAAATGTTGCCTAAAACCATGAATAGACTGACCCAGCTGGAAAGGCTGGATTTGGGAAGTAATGAATTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp AACTTCATACTTGCAGTTACTGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCACTCATTTTCTGTACA +
Preference number: 6 (lower is better)
Translates to: NFILAVTGKFPP*VSASGSLIFCT
Trigger: TGTACAGAAAATGAGTGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp GCTGGGGCAAGTCTCTGTTGTAAGTGGTATCCAGTATaGGCTCTAACATTGTTATGGTTAGAGAAATTCATG +
Preference number: 6 (lower is better)
Translates to: AGASLCCKWYPV*ALTLLWLEKFM
Trigger: CATGAATTTCTCTAACCATAACAATGTTAGAGCCAATACTGGATACCACTTACAACAGAGACTTGCCCCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 90 bp TTTCCAGACAACTTCATACTTGCAGTTACTGGCAAATTTCCACCATaGGTCTCAGCTTCAGGCTCACTCATTTTCTGTACAGAATTCATA +
Preference number: 6 (lower is better)
Translates to: FPDNFILAVTGKFPP*VSASGSLIFCTEFI
Trigger: TATGAATTCTGTACAGAAAATGAGTGAGCCTGAAGCTGAGACCAATGGTGGAAATTTGCCAGTAACTGCAAGTATGAAGTTGTCTGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp AGTAATTGTGATCTGCAGCAAATGTTCTCATGTTTGTaGGCTGGCCAATTGAGGAAGGCAAAGCTTCAATTT +
Preference number: 6 (lower is better)
Translates to: SNCDLQQMFSCL*AGQLRKAKLQF
Trigger: AAATTGAAGCTTTGCCTTCCTCAATTGGCCAGCTCACAAACATGAGAACATTTGCTGCAGATCACAATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp TTCTTCCCACAATGCAGGATTAAAACTTTCATTATCTaGTATGAACATAACGTCTTCAGTCCGTGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: FFPQCRIKTFII*YEHNVFSPWLL
Trigger: CAGCAGCCACGGACTGAAGACGTTATGTTCATATCAGATAATGAAAGTTTTAATCCTGCATTGTGGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CCA 72 bp GAAACTTCTCGTACAATGATGAGATCTACTGCATTATaGAAAGTTTTTAACAAGGACACCGCTTGCCCATGT +
Preference number: 6 (lower is better)
Translates to: ETSRTMMRSTAL*KVFNKDTACPC
Trigger: ACATGGGCAAGCGGTGTCCTTGTTAAAAACTTTCCATAATGCAGTAGATCTCATCATTGTACGAGAAGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS GCA 72 bp GTTATGGTTAGAGAAATTCATGTTGGCAGAATGCTTTaGATAACTGTGATTTTCTGCACTCTCAGATCTTGG +
Preference number: 6 (lower is better)
Translates to: VMVREIHVGRML*ITVIFCTLRSW
Trigger: CCAAGATCTGAGAGTGCAGAAAATCACAGTTATGCAAAGCATTCTGCCAACATGAATTTCTCTAACCATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS CAA 72 bp CTCTGTTGTAAGTGGTATCCAGTATTGGCTCTAACATaGTTATGGTTAGAGAAATTCATGTTGGCAGAATGC +
Preference number: 6 (lower is better)
Translates to: LCCKWYPVLALT*LWLEKFMLAEC
Trigger: GCATTCTGCCAACATGAATTTCTCTAACCATAACAATGTTAGAGCCAATACTGGATACCACTTACAACAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp TCCTTTTTATTATTACTAAGTGCTACAACTTTGGGCTaGTTAATCGAGGATTCAATTAATGGAGGTCGCATC +
Preference number: 6 (lower is better)
Translates to: SFLLLLSATTLG*LIEDSINGGRI
Trigger: GATGCGACCTCCATTAATTGAATCCTCGATTAATCAGCCCAAAGTTGTAGCACTTAGTAATAATAAAAAGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7
CDS TCA 72 bp TTAGTCTCTTCATCTTTTAATCTATGTACAATGGTTTaGACAGTCTTGACCATATTCTTAAGCTCATCTGGG +
Preference number: 6 (lower is better)
Translates to: LVSSSFNLCTMV*TVLTIFLSSSG
Trigger: CCCAGATGAGCTTAAGAATATGGTCAAGACTGTTCAAACCATTGTACATAGATTAAAAGATGAAGAGACTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000022222.12
ENSMUST00000053927.12
ENSMUST00000091269.11
ENSMUST00000169083.8
ENSMUST00000188997.7
ENSMUST00000191275.7