RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ERBB3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000018166

Ensembl transcript IDs: ENSMUST00000082059.7

Found 254 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGATTGCTGTGTGTGGAGTTGAAGGCCATCCTGGGCTACACAGTTaGAGGCCAGTCGCCAGGCCCGGCTTTACACACACACACATACAC +
Preference number: 1 (lower is better)
Translates to: GIAVCGVEGHPGLHS*RPVARPGFTHTHIH
Trigger: GTGTATGTGTGTGTGTGTAAAGCCGGGCCTGGCGACTGGCCTGCAACTGTGTAGCCCAGGATGGCCTTCAACTCCACACACAGCAATCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 90 bp GAGAGGCCTGGGTGCTGGAGGAAAACGTGGCTGGCTGCATTTGCTTaGTTCAGTGCACCAACAAACGGAGTCTGGAAGCTCACACATGTA +
Preference number: 1 (lower is better)
Translates to: ERPGCWRKTWLAAFA*FSAPTNGVWKLTHV
Trigger: TACATGTGTGAGCTTCCAGACTCCGTTTGTTGGTGCACTGAATCAAGCAAATGCAGCCAGCCACGTTTTCCTCCAGCACCCAGGCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 90 bp ACCAACAAACGGAGTCTGGAAGCTCACACATGTAGCCACAGCCTTTaGGAGGTGAAGATGGGATTGCTGTGTGTGGAGTTGAAGGCCATC +
Preference number: 1 (lower is better)
Translates to: TNKRSLEAHTCSHSL*EVKMGLLCVELKAI
Trigger: GATGGCCTTCAACTCCACACACAGCAATCCCATCTTCACCTCTCAAAGGCTGTGGCTACATGTGTGAGCTTCCAGACTCCGTTTGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 90 bp ACAAAAATGTCTAGTTACTTGTCCTGTGTCATCTCCACTCCTTCCTaGGATGAGAGGCCTGGGTGCTGGAGGAAAACGTGGCTGGCTGCA +
Preference number: 1 (lower is better)
Translates to: TKMSSYLSCVISTPS*DERPGCWRKTWLAA
Trigger: TGCAGCCAGCCACGTTTTCCTCCAGCACCCAGGCCTCTCATCTCAGGAAGGAGTGGAGATGACACAGGACAAGTAACTAGACATTTTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 90 bp TCCGGGACCTGTTGGCTATCTTGGAACACTCAGATTCCATATTGGTaGAACAGGATCAGTTCTACCTCACAAAACTGGAAAGATTATAAC +
Preference number: 1 (lower is better)
Translates to: SGTCWLSWNTQIPYW*NRISSTSQNWKDYN
Trigger: GTTATAATCTTTCCAGTTTTGTGAGGTAGAACTGATCCTGTTTCACCAATATGGAATCTGAGTGTTCCAAGATAGCCAACAGGTCCCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CAA 90 bp GGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTTTCCTAGGCTaGGGAAGAGAAGAGAGTGCACAGCCGGCTATGTACCGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: GIRKGETQGNFSFLG*GREESAQPAMYRKK
Trigger: CTTTTTGCGGTACATAGCCGGCTGTGCACTCTCTTCTCTTCCCAAGCCTAGGAAAGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR GCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTGGGAAGAGAAGAGAGTaGACAGCCGGCTATGTACCG +
Preference number: 2 (lower is better)
Translates to: KSLRERVWRVILHISRESGKRRE*TAGYVP
Trigger: CGGTACATAGCCGGCTGTGCACTCTCTTCTCTTCCC...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR GCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCAAAGAGGCACTAGCTaGCATCAAATGTTCCCCAAG +
Preference number: 2 (lower is better)
Translates to: KSLRERVWRVILHISRESQRGTS*HQMFPK
Trigger: CTTGGGGAACATTTGATGGCAGCTAGTGCCTCTTTG...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTACCTCAGAGAAAGGGGTaGGGAAGGGTTACCCTCAAA +
Preference number: 2 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVPQRKG*GRVTLK
Trigger: TTTGAGGGTAACCCTTCCTCACCCCTTTCTCTGAGG...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CAA 90 bp GAGTGCACAGCCGGCTATGTACCGCAAAAAGTTTGTGACGATATGTaGACAAATCTCCAAGAACTAGATGGCATTCTTGGAGAAATGGAG +
Preference number: 2 (lower is better)
Translates to: ECTAGYVPQKVCDDM*TNLQELDGILGEME
Trigger: CTCCATTTCTCCAAGAATGCCATCTAGTTCTTGGAGATTTGTCAACATATCGTCACAAACTTTTTGCGGTACATAGCCGGCTGTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR CCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTGGAGGAAAACGTGGCTaGCTGCATTTGCTTGATTCA +
Preference number: 2 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVGGKRG*LHLLDS
Trigger: TGAATCAAGCAAATGCAGCCAGCCACGTTTTCCTCC...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CAA 90 bp AGATTCCGGGACCTGTTGGCTATCTTGGAACACTCAGATTCCATATaGGTGAAACAGGATCAGTTCTACCTCACAAAACTGGAAAGATTA +
Preference number: 2 (lower is better)
Translates to: RFRDLLAILEHSDSI*VKQDQFYLTKLERL
Trigger: TAATCTTTCCAGTTTTGTGAGGTAGAACTGATCCTGTTTCACCAATATGGAATCTGAGTGTTCCAAGATAGCCAACAGGTCCCGGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR CCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTATCTCCAAGAACTAGATaGCATTCTTGGAGAAATGGA +
Preference number: 2 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVSPRTR*HSWRNG
Trigger: TCCATTTCTCCAAGAATGCCATCTAGTTCTTGGAGA...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR TCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTTGGAAAGATTATAACTaGGACAATGTAGGTGGGGTT +
Preference number: 2 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVWKDYN*DNVGGV
Trigger: AACCCCACCTACATTGTCTCAGTTATAATCTTTCCA...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR CCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTTTGTTTGAGAAAAGGTaGAAATTCTTGACTTCACGG +
Preference number: 2 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVLFEKR*KFLTSR
Trigger: CCGTGAAGTCAAGAATTTCCACCTTTTCTCAAACAA...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR GCA 72 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTaGCATCAAATGTTCCCCAAGAGTCTCAAGGAACCG +
Preference number: 3 (lower is better)
Translates to: GVRKGYPQRGTS*HQMFPKSLKEP
Trigger: CGGTTCCTTGAGACTCTTGGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CCA 72 bp GAGATGAGAGGCCTGGGTGCTGGAGGAAAACGTGGCTaGCTGCATTTGCTTGATTCAGTGCACCAACAAACG +
Preference number: 3 (lower is better)
Translates to: EMRGLGAGGKRG*LHLLDSVHQQT
Trigger: CGTTTGTTGGTGCACTGAATCAAGCAAATGCAGCCAGCCACGTTTTCCTCCAGCACCCAGGCCTCTCATCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 72 bp TGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTaGGGAACGGGATCAGGAAGGGAGAGACACAGGGAA +
Preference number: 3 (lower is better)
Translates to: WRVILHISRESP*GTGSGRERHRE
Trigger: TTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 72 bp CGGAGTCTGGAAGCTCACACATGTAGCCACAGCCTTTaGGAGGTGAAGATGGGATTGCTGTGTGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: RSLEAHTCSHSL*EVKMGLLCVEL
Trigger: CAACTCCACACACAGCAATCCCATCTTCACCTCTCAAAGGCTGTGGCTACATGTGTGAGCTTCCAGACTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 72 bp TCTAGTTACTTGTCCTGTGTCATCTCCACTCCTTCCTaGGATGAGAGGCCTGGGTGCTGGAGGAAAACGTGG +
Preference number: 3 (lower is better)
Translates to: SSYLSCVISTPS*DERPGCWRKTW
Trigger: CCACGTTTTCCTCCAGCACCCAGGCCTCTCATCTCAGGAAGGAGTGGAGATGACACAGGACAAGTAACTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR CAA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACTCACTCCTCAAAGCTTaGAGCTTCTCAATCTTCCTC +
Preference number: 3 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYSLLKA*SFSIFL
Trigger: GAGGAAGATTGAGAAGCTCAAAGCTTTGAGGAGTGA...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR GCA 72 bp AAACTTCTCTTTCCTAGGCTTGGGAAGAGAAGAGAGTaGACAGCCGGCTATGTACCGCAAAAAGTTTGTGAC +
Preference number: 3 (lower is better)
Translates to: KLLFPRLGKRRE*TAGYVPQKVCD
Trigger: GTCACAAACTTTTTGCGGTACATAGCCGGCTGTGCACTCTCTTCTCTTCCCAAGCCTAGGAAAGAGAAGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CCA 72 bp AATCACAGGCATGGGAATTGGGAGGATTTTGAATCCTaGACCTGTGGCTTTGCTTCTTCAAGGCTCAATTCC +
Preference number: 3 (lower is better)
Translates to: NHRHGNWEDFES*TCGFASSRLNS
Trigger: GGAATTGAGCCTTGAAGAAGCAAAGCCACAGGTCCAGGATTCAAAATCCTCCCAATTCCCATGCCTGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR-3UTR CAA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACGTTTGTGACGATATGTaGACAAATCTCCAAGAACTA +
Preference number: 3 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNVCDDM*TNLQEL
Trigger: TAGTTCTTGGAGATTTGTCAACATATCGTCACAAAC...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 72 bp ATAGTTAAATCACAGGCATGGGAATTGGGAGGATTTTaGATCCTGGACCTGTGGCTTTGCTTCTTCAAGGCT +
Preference number: 3 (lower is better)
Translates to: IVKSQAWELGGF*ILDLWLCFFKA
Trigger: AGCCTTGAAGAAGCAAAGCCACAGGTCCAGGATTCAAAATCCTCCCAATTCCCATGCCTGTGATTTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CCA 72 bp GATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTaGTTGAGAACAGCTCCCAAAATAGGAGTCTTGGAA +
Preference number: 3 (lower is better)
Translates to: DPLSIPPEVYHY*LRTAPKIGVLE
Trigger: TTCCAAGACTCCTATTTTGGGAGCTGTTCTCAACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 72 bp ATCAGTTCTACCTCACAAAACTGGAAAGATTATAACTaGGACAATGTAGGTGGGGTTCAGTATGAGGATGCC +
Preference number: 3 (lower is better)
Translates to: ISSTSQNWKDYN*DNVGGVQYEDA
Trigger: GGCATCCTCATACTGAACCCCACCTACATTGTCTCAGTTATAATCTTTCCAGTTTTGTGAGGTAGAACTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR TCA 72 bp TGTTGGCTATCTTGGAACACTCAGATTCCATATTGGTaGAACAGGATCAGTTCTACCTCACAAAACTGGAAA +
Preference number: 3 (lower is better)
Translates to: CWLSWNTQIPYW*NRISSTSQNWK
Trigger: TTTCCAGTTTTGTGAGGTAGAACTGATCCTGTTTCACCAATATGGAATCTGAGTGTTCCAAGATAGCCAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCGGCACTGTCCCCACGTaGCCGTGGGCTCCGGCTCCG +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPGTVPT*PWAPAP
Trigger: CGGAGCCGGAGCCCACGGCCACGTGGGGACAGTGCC...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCCCGAGCCATTGCACGTaGTGGTGCCCTCCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPPSHCT*WCPPWA
Trigger: AGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGG...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTGGGCAGAACCCAGTGTaGTCGCCAGGCCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSGQNPV*SPGPPL
Trigger: AAGAGGAGGGCCTGGCGACCACACTGGGTTCTGCCC...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCCCCTTGTTCAGCTGCTaGGCAGGCCCCCATAGCTGC +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPPLFSC*AGPHSC
Trigger: GCAGCTATGGGGGCCTGCCCAGCAGCTGAACAAGGG...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTCCCAGCATCGCCCCTTaGAGACTTCGTGACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSPSIAP*RLRDRV
Trigger: CACCCTGTCACGAAGTCTGCAAGGGGCGATGCTGGG...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTGTTGAGCAGCAGCTGTaGTCCCAGTGTCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSVEQQL*SQCLTV
Trigger: CACCGTGAGACACTGGGACCACAGCTGCTGCTCAAC...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTGGGGCGCTGGACACCTaGGCACACAGGCACCACTGT +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESGALDT*AHRHHC
Trigger: ACAGTGGTGCCTGTGTGCCCAGGTGTCCAGCGCCCC...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCGTTTGCCTTCTCGCTTaGGTCCAGAGGCTCGATGCT +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPVCLLA*VQRLDA
Trigger: AGCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAAC...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCTACCCAGCACAGAACTaGGACCTACTGACGAAAGGG +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPYPAQN*DLLTKG
Trigger: CCCTTTCGTCAGTAGGTCTCAGTTCTGTGCTGGGTA...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCGTGGATCACACACTTTaGCCTCTGCCACGCATTCTC +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPVDHTL*PLPRIL
Trigger: GAGAATGCGTGGCAGAGGGCAAAGTGTGTGATCCAC...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTAGCCACACCAAAATCTaGCACCTGGACTTGACTCGG +
Preference number: 4 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSSHTKI*HLDLTR
Trigger: CCGAGTCAAGTCCAGGTGGCAGATTTTGGTGTGGCT...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCAAGCCTCCCCAAGGTTaGTCTGGTTCATGGGCATGT +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPKPPQG*SGSWAC
Trigger: ACATGCCCATGAACCAGAGCAACCTTGGGGAGGCTT...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCGTACAATGTGGGCATaGTCCAGGCTGCCGACGGCC +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESRTMWA*SRLPTA
Trigger: GGCCGTCGGCAGCCTGGACCATGCCCACATTGTACG...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACATACTGCCTGAGAGTTaGCCATCTCGGAACCCCGGG +
Preference number: 4 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYILPES*PSRNPG
Trigger: CCCGGGGTTCCGAGATGGGCAACTCTCAGGCAGTAT...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTAGCCAAGACTTTGTTTaGCTTCTCGCTTGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSSQDFV*LLAWVQ
Trigger: CTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCT...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCTCCAGCTCTGCATCCTaGAACTCTTTGGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPSSSAS*NSLVLR
Trigger: TCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTGGA...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACGGTCCCTTACACCCTTaGGTGCAGTTCTCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNGPLHP*VQFSWQ
Trigger: CTGCCACGAGAACTGCACCCAAGGGTGTAAGGGACC...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCCATCCTGCAACTCTTTaGTGCTCAGAGCAGATGGCT +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPHPATL*CSEQMA
Trigger: AGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATG...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTGTCGAGGTCCAGGTCTaGCTCCAGCTCTGCATCCTG +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESVEVQV*LQLCIL
Trigger: CAGGATGCAGAGCTGGAGCCAGACCTGGACCTCGAC...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCAGCGACCGTTACACTaGGGGGCACAGATGGTCTTG +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESQRPLH*GAQMVL
Trigger: CAAGACCATCTGTGCCCCTCAGTGTAACGGTCGCTG...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACAGGAAACCCAGCACCTaGAGAGTCCCAATCGCACTC +
Preference number: 4 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYRKPST*RVPIAL
Trigger: GAGTGCGATTGGGACTCTGCAGGTGCTGGGTTTCCT...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACAGTGCAGGGATCTTGTaGCAGGGGTCACCATTGAGG +
Preference number: 4 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYSAGIL*QGSPLR
Trigger: CCTCAATGGTGACCCCTGGCACAAGATCCCTGCACT...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACTGGAGTGGGCAACTCTaGGTACTGCCCAGAGAAGCA +
Preference number: 4 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYWSGQL*VLPREA
Trigger: TGCTTCTCTGGGCAGTACGCAGAGTTGCCCACTCCA...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTATCTGGCAGTCTTCTaGTCCAGGCCCCCAGCATCG +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESYLAVF*SRPPAS
Trigger: CGATGCTGGGGGCCTGGACCAGAAGACTGCCAGATA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGAGCCATTGCACGTGCTaGTGCCCTCCATGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKSHCTC*CPPWAG
Trigger: GCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCT...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTTCTGAGGTGCGTATCTaGCATGACATAACCATTGCC +
Preference number: 4 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSSEVRI*HDITIA
Trigger: GGCAATGGTTATGTCATGCCAGATACGCACCTCAGA...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTGCCCAGAGAAGCACTaGGGTCTGAACCCACATCCA +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESCPEKH*GLNPHP
Trigger: TGGATGTGGGTTCAGACCTCAGTGCTTCTCTGGGCA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACCCCCTTGCAGAACGTTaGAGTGAGTCACACAGACAC +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNPLAER*SESHRH
Trigger: GTGTCTGTGTGACTCACTGCAACGTTCTGCAAGGGG...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAGGGCATGGTCCAGGCTaGCGACGGCCAGCATGTGAT +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVGHGPG*RRPACD
Trigger: ATCACATGCTGGCCGTCGGCAGCCTGGACCATGCCC...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCCCCCGTGGGATCGGGTaGAGAGAGATGGGACGGGAG +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIPRGIG*REMGRE
Trigger: CTCCCGTCCCATCTCTCTGCACCCGATCCCACGGGG...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTGCTGGTGCCCTCCATaGGCTGGCATTCTGGATGGC +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKCWCPP*AGILDG
Trigger: GCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCA...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCGTGTATTTCCCAAAGTaGATACTCTCAAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPVYFPK*ILSRAI
Trigger: GATGGCCCTTGAGAGTATCCACTTTGGGAAATACAC...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGGACCAGATACCTTGGTaGGTCCCGGGCCATCCTGGT +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKDQIPW*VPGHPG
Trigger: ACCAGGATGGCCCGGGACCCACCAAGGTATCTGGTC...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CAA 72 bp AAGGGAGAGACACAGGGAAACTTCTCTTTCCTAGGCTaGGGAAGAGAAGAGAGTGCACAGCCGGCTATGTAC +
Preference number: 4 (lower is better)
Translates to: KGETQGNFSFLG*GREESAQPAMY
Trigger: GTACATAGCCGGCTGTGCACTCTCTTCTCTTCCCAAGCCTAGGAAAGAGAAGTTTCCCTGTGTCTCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCAACCCCGGGCCAGGCTaGGAAGGAAACCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLINPGPG*EGNPAP
Trigger: AGGTGCTGGGTTTCCTTCTCAGCCTGGCCCGGGGTT...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTGAGGCAAGTACTGAGTaGCAAGCTGCAGAGATGACC +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESEASTE*QAAEMT
Trigger: GGTCATCTCTGCAGCTTGTCACTCAGTACTTGCCTC...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACTGTAGACGTCAATGGTaGAGATCTGGGGCTGTGCTA +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNCRRQW*RSGAVL
Trigger: TAGCACAGCCCCAGATCTGCACCATTGACGTCTACA...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACCCTGCACATTCATCGTaGCAGCACTGGTTAGGATTG +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNPAHSS*QHWLGL
Trigger: CAATCCTAACCAGTGCTGCCACGATGAATGTGCAGG...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCATGGGCTGGCATTCTaGATGGCAGGAGAAGCAATG +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESHGLAF*MAGEAM
Trigger: CATTGCTTCTCCTGCCATCCAGAATGCCAGCCCATG...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAGTGCCCTCCATGGGCTaGCATTCTGGATGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVVPSMG*HSGWQE
Trigger: CTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCAC...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAAGCAGCCGTACAATGTaGGCATGGTCCAGGCTGCCG +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVSSRTM*AWSRLP
Trigger: CGGCAGCCTGGACCATGCCCACATTGTACGGCTGCT...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGGATGACCAGATACCTTaGTGGGTCCCGGGCCATCCT +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKDDQIP*WVPGHP
Trigger: AGGATGGCCCGGGACCCACCAAGGTATCTGGTCATC...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACGGTTGCTCTGGTTCATaGGCATGTATCCAGACGAAG +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNGCSGS*ACIQTK
Trigger: CTTCGTCTGGATACATGCCCATGAACCAGAGCAACC...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGAGGGCACGATGGCCATaGGATGGAGTGGGCAACTCT +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKRARWP*DGVGNS
Trigger: AGAGTTGCCCACTCCATCCCATGGCCATCGTGCCCT...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTCAGCAGAGGGCACGATaGCCATGGGATGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFQQRAR*PWDGVG
Trigger: GCCCACTCCATCCCATGGCCATCGTGCCCTCTGCTG...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTCTCCAGGTTACCCATaGCCACCTCACACTTCTCAT +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESSPGYP*PPHTSH
Trigger: ATGAGAAGTGTGAGGTGGTCATGGGTAACCTGGAGA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACAACTACGCAGAGTTTTaGGGCGGGCATAACGAACAT +
Preference number: 4 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYNYAEF*GGHNEH
Trigger: ATGTTCGTTATGCCCGCCTCAAAACTCTGCGTAGTT...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTCCCTGCGTAGGGCTCTaGCCCGAAGGTCATCAACTC +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFPCVGL*PEGHQL
Trigger: GAGTTGATGACCTTCGGGGCAGAGCCCTACGCAGGG...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAAGCAGATGGCTCTGCTaGAGGAGGTATTCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVSRWLC*RRYSRP
Trigger: GGGCCTGGAATACCTCCTGCAGCAGAGCCATCTGCT...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCCCTCATCTGGAGTCGTaGCAGCAGAGGGCACGATGG +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIPHLES*QQRARW
Trigger: CCATCGTGCCCTCTGCTGGCACGACTCCAGATGAGG...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTTGGGTGCAGTTCTCGTaGCAGGGCCGGCACTCATTC +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVWVQFS*QGRHSF
Trigger: GAATGAGTGCCGGCCCTGCCACGAGAACTGCACCCA...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTCAGAGCCCGTCACATaGCCCTCTGATGACTCTGAC +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKSEPVT*PSDDSD
Trigger: GTCAGAGTCATCAGAGGGCCATGTGACGGGCTCTGA...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACATTGATACTCTCTCTTaGAGTTCAGCCTCAGAGCCC +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNIDTLS*SSASEP
Trigger: GGGCTCTGAGGCTGAACTCCAAGAGAGAGTATCAAT...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGACGATGGCCATGGGATaGAGTGGGCAACTCTGCGTA +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKTMAMG*SGQLCV
Trigger: TACGCAGAGTTGCCCACTCCATCCCATGGCCATCGT...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTAGGCACCACTGTCATTaGAGTGTCGGCAGGCGAAGC +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFRHHCH*SVGRRS
Trigger: GCTTCGCCTGCCGACACTTCAATGACAGTGGTGCCT...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTATAGCCCTTTTATTCTaGATCCTGCGTCCACGCCAA +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESIALLF*ILRPRQ
Trigger: TTGGCGTGGACGCAGGATTCAGAATAAAAGGGCTAT...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTATTTGTACTCCCCAGTTaGGCAGCAGCTGTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVFVLPS*AAAVVP
Trigger: TGGGACCACAGCTGCTGCTCAACTGGGGAGTACAAA...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAAGAACTGAGACCTACTaGCGAAAGGGTGCCTTCCCG +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVRTETY*RKGAFP
Trigger: CGGGAAGGCACCCTTTCGTCAGTAGGTCTCAGTTCT...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACACTTCTCGGATCCATTaGAGGAAGGAAAGATCAGCA +
Preference number: 4 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYTSRIH*RKERSA
Trigger: TGCTGATCTTTCCTTCCTGCAATGGATCCGAGAAGT...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCTTTTCCGGGTCCAGTaGAGGGATCTTGTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVLFRVQ*RDLVPG
Trigger: CCCTGGCACAAGATCCCTGCACTGGACCCGGAAAAG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTATACCCTTGTTCAGCTaGTGGGCAGGCCCCCATAGC +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVIPLFS*WAGPHS
Trigger: GCTATGGGGGCCTGCCCAGCAGCTGAACAAGGGTAT...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACAGTTTGTACAGTGTCTaGTACTGGTTGTCAGCATCG +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNSLYSV*YWLSAS
Trigger: CGATGCTGACAACCAGTACCAGACACTGTACAAACT...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTGCCCCCGCAGAAGTCTaGTCCAGTTCAGAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFAPAEV*SSSESG
Trigger: ACCACTCTCTGAACTGGACCAGACTTCTGCGGGGGC...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAGCACCTAGGATTCCATaGGGGCAGCTGTTCACACAG +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVAPRIP*GQLFTQ
Trigger: CTGTGTGAACAGCTGCCCCCATGGAATCCTAGGTGC...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTACCCAGAGGCAAGTACTaGGTGACAAGCTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVPRGKY*VTSCRD
Trigger: ATCTCTGCAGCTTGTCACTCAGTACTTGCCTCTGGG...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGAGAAGCACTGAGGTCTaGACCCACATCCATGTACTC +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKRSTEV*THIHVL
Trigger: GAGTACATGGATGTGGGTTCAGACCTCAGTGCTTCT...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGGGTCCCTATGCACCATaGTGTGTTCCTCGAGGTAAT +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKGPYAP*CVPRGN
Trigger: ATTACCTCGAGGAACACAGCATGGTGCATAGGGACC...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCAGAGCAGATGGCTCTaGTGCAGGAGGTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVQSRWL*CRRYSR
Trigger: CCTGGAATACCTCCTGCAGCAGAGCCATCTGCTCTG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGGGCGCAGAGCATGGCTaGAGTTGGTATTGTAGTTCA +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKGAEHG*SWYCSS
Trigger: TGAACTACAATACCAACTCCAGCCATGCTCTGCGCC...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTAAGCAATCTGTGTCCTaGGGTCCAGAGCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVKQSVS*GPEQPP
Trigger: AGGTGGCTGCTCTGGACCCCAGGACACAGATTGCTT...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGGGTTGCCCAGGATCTTaGTACAGTTCACGAACCCAT +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKGCPGS*YSSRTH
Trigger: ATGGGTTCGTGAACTGTACCAAGATCCTGGGCAACC...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCGGTGCTCAGAGCAGATaGCTCTGCTGCAGGAGGTAT +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIGAQSR*LCCRRY
Trigger: ATACCTCCTGCAGCAGAGCCATCTGCTCTGAGCACC...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTCCCCAAGGTTGCTCTaGTTCATGGGCATGTATCCA +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKSPRLL*FMGMYP
Trigger: TGGATACATGCCCATGAACCAGAGCAACCTTGGGGA...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACAAGGCTCACACATCTTaGGTCCATTCTTATCTACTT +
Preference number: 4 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNKAHTS*VHSYLL
Trigger: AAGTAGATAAGAATGGACTCAAGATGTGTGAGCCTT...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTTGCAGAACGTTGCAGTaGGTCACACAGACACCTTCC +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVCRTLQ*VTQTPS
Trigger: GGAAGGTGTCTGTGTGACTCACTGCAACGTTCTGCA...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTATGCAGACTGGAATCTTaGTGGATTCACCCTCGGGAA +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVCRLES*WIHPRE
Trigger: TTCCCGAGGGTGAATCCATCAAGATTCCAGTCTGCA...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCCTGCAACTCTTTGGTaGTCAGAGCAGATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVPATLW*SEQMAL
Trigger: CAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTGTCTGGCTCCAGCTCTaGATCCTGCAACTCTTTGGT +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFVWLQL*ILQLFG
Trigger: ACCAAAGAGTTGCAGGATGCAGAGCTGGAGCCAGAC...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTTACAGTGTCTGGTACTaGTTGTCAGCATCGCCGGTC +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVYSVWY*LSASPV
Trigger: GACCGGCGATGCTGACAACCAGTACCAGACACTGTA...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCACTATCTCAGCGTCTaGAACCCTCACGATGTCCCT +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVHYLSV*NPHDVP
Trigger: AGGGACATCGTGAGGGTTCCAGACGCTGAGATAGTG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTCAGCTGTTCACACAGTaGGGCCCATCACGAAAATGG +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFQLFTQ*GPSRKW
Trigger: CCATTTTCGTGATGGGCCCCACTGTGTGAACAGCTG...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCTCCGTACTGATACTTaGTATGGGGGTTGGGCTCAA +
Preference number: 4 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVLRTDT*YGGWAQ
Trigger: TTGAGCCCAACCCCCATATCAAGTATCAGTACGGAG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTCAGCAGGACAAGCCCTaGCACAAAATGTCTGATCCA +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFQQDKP*HKMSDP
Trigger: TGGATCAGACATTTTGTGTCAGGGCTTGTCCTGCTG...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCGGTGCGTATCTGGCATaGCATAACCATTGCCATCCT +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIGAYLA*HNHCHP
Trigger: AGGATGGCAATGGTTATGTCATGCCAGATACGCACC...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR GCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTTTTATTCTGAATCCTaGGTCCACGCCAATAGAGAA +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESFYSES*VHANRE
Trigger: TTCTCTATTGGCGTGGACGCAGGATTCAGAATAAAA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCGTCTTGGTCAATATCTaGCAGTCTTCTGGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIVLVNI*QSSGPG
Trigger: GCCTGGACCAGAAGACTGCCAGATATTGACCAAGAC...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCGGGTTGGGCTCAAGCTaGAACGTTAGCTTGTTGTAC +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIGLGSS*NVSLLY
Trigger: GTACAACAAGCTAACGTTCCAGCTTGAGCCCAACCC...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTGACTTTAATGCAGACTaGAATCTTGATGGATTCACC +
Preference number: 4 (lower is better)
Translates to: KSLRERVWRVILHISRESDFNAD*NLDGFT
Trigger: GGTGAATCCATCAAGATTCCAGTCTGCATTAAAGTC...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGCTCCAGACATCACTCTaGTGTGTGTATTTCCCAAAG +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKLQTSL*CVYFPK
Trigger: CTTTGGGAAATACACACACCAGAGTGATGTCTGGAG...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CAA 72 bp CCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTaGAGAACAGCTCCCAAAATAGGAGTCTTGGAACCT +
Preference number: 4 (lower is better)
Translates to: PLSIPPEVYHYW*RTAPKIGVLEP
Trigger: AGGTTCCAAGACTCCTATTTTGGGAGCTGTTCTCAACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTACATTCAAGTTCTTCATaGTCAACAAGGAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVHSSSS*STRRSP
Trigger: GGGGCTTCTCCTTGTTGATCATGAAGAACTTGAATG...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTTCCACCACAAAGTTATaGGGACAACTGGCAACACAG +
Preference number: 4 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFSTTKL*GQLATQ
Trigger: CTGTGTTGCCAGTTGTCCCCATAACTTTGTGGTGGA...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGGGTAATACATACCCTTaGCAATTTGTACTCCCCAGT +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKGNTYP*QFVLPS
Trigger: ACTGGGGAGTACAAATTGCCAAGGGTATGTATTACC...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCGGCCATCCATTTAATTaGAGTCTTGGCCTCACTGTG +
Preference number: 4 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIGHPFN*SLGLTV
Trigger: CACAGTGAGGCCAAGACTCCAATTAAATGGATGGCC...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
3UTR CAA 72 bp GCCGGCTATGTACCGCAAAAAGTTTGTGACGATATGTaGACAAATCTCCAAGAACTAGATGGCATTCTTGGA +
Preference number: 4 (lower is better)
Translates to: AGYVPQKVCDDM*TNLQELDGILG
Trigger: TCCAAGAATGCCATCTAGTTCTTGGAGATTTGTCAACATATCGTCACAAACTTTTTGCGGTACATAGCCGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTACTGACACAAAATGTCTaGTCCACCACAAAGTTATGG +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVLTQNV*STTKLW
Trigger: CCATAACTTTGTGGTGGATCAGACATTTTGTGTCAG...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR TCA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTATTGTAGTTCAACATaGCAAAGATGGCAAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFSFISPSLESDWGRKAKYCSST*QRWQTS
Trigger: GGAAGTTTGCCATCTTTGTCATGTTGAACTACAATA...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CCA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTACAGTTCTTTAAAGGTTaGGCGAATATTCTCGTCAAT +
Preference number: 4 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVQFFKG*ANILVN
Trigger: ATTGACGAGAATATTCGCCCAACCTTTAAAGAACTG...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp AATGGGCGCATCGAGCACAAGCGTCGGAGCCCGAGCCATTGCACGTaGTGGTGCCCTCCATGGGCTGGCATTCTGGATGGCAGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: NGRIEHKRRSPSHCT*WCPPWAGILDGRRS
Trigger: GCTTCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTCGATGCGCCCATT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp GGGCGCATCGAGCACAAGCGTCGGAGCCCGAGCCATTGCACGTGCTaGTGCCCTCCATGGGCTGGCATTCTGGATGGCAGGAGAAGCAAT +
Preference number: 5 (lower is better)
Translates to: GRIEHKRRSPSHCTC*CPPWAGILDGRRSN
Trigger: ATTGCTTCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTCGATGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp CGCATCGAGCACAAGCGTCGGAGCCCGAGCCATTGCACGTGCTGGTaGCCTCCATGGGCTGGCATTCTGGATGGCAGGAGAAGCAATGAG +
Preference number: 5 (lower is better)
Translates to: RIEHKRRSPSHCTCW*PPWAGILDGRRSNE
Trigger: CTCATTGCTTCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTCGATGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp ACACAAGGGGCGCTGGACACCTGGGCACACAGGCACCACTGTCATTaGAGTGTCGGCAGGCGAAGCAATCTGTGTCCTGGGGTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: TQGALDTWAHRHHCH*SVGRRSNLCPGVQS
Trigger: GCTCTGGACCCCAGGACACAGATTGCTTCGCCTGCCGACACTTCAATGACAGTGGTGCCTGTGTGCCCAGGTGTCCAGCGCCCCTTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp CTGGGCACAGTCCCAGCAGCCGTACAATGTGGGCATGGTCCAGGCTaGCGACGGCCAGCATGTGATCAGTCACAGCCTGAAAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: LGTVPAAVQCGHGPG*RRPACDQSQPENSA
Trigger: GGCAGAGTTTTCAGGCTGTGACTGATCACATGCTGGCCGTCGGCAGCCTGGACCATGCCCACATTGTACGGCTGCTGGGACTGTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp CATTTCCTCATACCCTTGTTCAGCTGCTGGGCAGGCCCCCATAGCTaGATAATCCCCTCCGGAACCGCCCGCACCACGCCTGCGGTTCAT +
Preference number: 5 (lower is better)
Translates to: HFLIPLFSCWAGPHS*IIPSGTARTTPAVH
Trigger: ATGAACCGCAGGCGTGGTGCGGGCGGTTCCGGAGGGGATTATGCAGCTATGGGGGCCTGCCCAGCAGCTGAACAAGGGTATGAGGAAATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp GCCCGAGCCATTGCACGTGCTGGTGCCCTCCATGGGCTGGCATTCTaGATGGCAGGAGAAGCAATGAGCCTCATGAACAAACTCTCGGGG +
Preference number: 5 (lower is better)
Translates to: ARAIARAGALHGLAF*MAGEAMSLMNKLSG
Trigger: CCCCGAGAGTTTGTTCATGAGGCTCATTGCTTCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp GGACCTTTGGCACCTAGGATTCCATGGGGGCAGCTGTTCACACAGTaGGGCCCATCACGAAAATGGGCGCATCGAGCACAAGCGTCGGAG +
Preference number: 5 (lower is better)
Translates to: GPLAPRIPWGQLFTQ*GPSRKWAHRAQASE
Trigger: CTCCGACGCTTGTGCTCGATGCGCCCATTTTCGTGATGGGCCCCACTGTGTGAACAGCTGCCCCCATGGAATCCTAGGTGCCAAAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp GGTCGAGGTCCAGGTCTGGCTCCAGCTCTGCATCCTGCAACTCTTTaGTGCTCAGAGCAGATGGCTCTGCTGCAGGAGGTATTCCAGGCC +
Preference number: 5 (lower is better)
Translates to: GRGPGLAPALHPATL*CSEQMALLQEVFQA
Trigger: GGCCTGGAATACCTCCTGCAGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTGGAGCCAGACCTGGACCTCGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp CCACATCCATGTACTCATAGCCCAGCTCTTCCAGGGAACCAGGTCTaGGGGGCCGAGCCGGGCTACCCCTCCTCTTCCGGTTCATGTATT +
Preference number: 5 (lower is better)
Translates to: PHPCTHSPALPGNQV*GAEPGYPSSSGSCI
Trigger: AATACATGAACCGGAAGAGGAGGGGTAGCCCGGCTCGGCCCCCCAGACCTGGTTCCCTGGAAGAGCTGGGCTATGAGTACATGGATGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTCAGCACTGGTTAGGATaGGGCCCGAAGCAGCGACCG +
Preference number: 5 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSQHWLG*GPKQRP
Trigger: CGGTCGCTGCTTCGGGCCCAATCCTAACCAGTGCTG...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp GCATTCTCCCAGAGGCCGGTTGTACTTGATGTCAAGTCTCTCCTCTaGGGGCCCCCGCAGAAGTCTGGTCCAGTTCAGAGAGTGGTGGTA +
Preference number: 5 (lower is better)
Translates to: AFSQRPVVLDVKSLL*GPPQKSGPVQRVVV
Trigger: TACCACCACTCTCTGAACTGGACCAGACTTCTGCGGGGGCCCGCAGAGGAGAGACTTGACATCAAGTACAACCGGCCTCTGGGAGAATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp CCAGCATCCCCCAGAGGAGCACAGTGGATCACACACTTTGCCCTCTaGCACGCATTCTCCCAGAGGCCGGTTGTACTTGATGTCAAGTCT +
Preference number: 5 (lower is better)
Translates to: PASPRGAQWITHFAL*HAFSQRPVVLDVKS
Trigger: AGACTTGACATCAAGTACAACCGGCCTCTGGGAGAATGCGTGGCAGAGGGCAAAGTGTGTGATCCACTGTGCTCCTCTGGGGGATGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp CAGCTCTGCATCCTGCAACTCTTTGGTGCTCAGAGCAGATGGCTCTaGTGCAGGAGGTATTCCAGGCCCACTCGCTCTCTTGATGACCAG +
Preference number: 5 (lower is better)
Translates to: QLCILQLFGAQSRWL*CRRYSRPTRSLDDQ
Trigger: CTGGTCATCAAGAGAGCGAGTGGGCCTGGAATACCTCCTGCAGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp TGGCTCCAGCTCTGCATCCTGCAACTCTTTGGTGCTCAGAGCAGATaGCTCTGCTGCAGGAGGTATTCCAGGCCCACTCGCTCTCTTGAT +
Preference number: 5 (lower is better)
Translates to: WLQLCILQLFGAQSR*LCCRRYSRPTRSLD
Trigger: ATCAAGAGAGCGAGTGGGCCTGGAATACCTCCTGCAGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp TGTATTCATAGTCCTCATCTGGAGTCGTGCCAGCAGAGGGCACGATaGCCATGGGATGGAGTGGGCAACTCTGCGTACTGCCCAGAGAAG +
Preference number: 5 (lower is better)
Translates to: CIHSPHLESCQQRAR*PWDGVGNSAYCPEK
Trigger: CTTCTCTGGGCAGTACGCAGAGTTGCCCACTCCATCCCATGGCCATCGTGCCCTCTGCTGGCACGACTCCAGATGAGGACTATGAATACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTTGTTTGCCTTCTCGCTaGGGTCCAGAGGCTCGATGC +
Preference number: 5 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSCLPSR*GPEARC
Trigger: GCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACA...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp TGGCAGCACTGGTTAGGATTGGGCCCGAAGCAGCGACCGTTACACTaGGGGGCACAGATGGTCTTGGTCAATATCTGGCAGTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: WQHWLGLGPKQRPLH*GAQMVLVNIWQSSG
Trigger: ACCAGAAGACTGCCAGATATTGACCAAGACCATCTGTGCCCCTCAGTGTAACGGTCGCTGCTTCGGGCCCAATCCTAACCAGTGCTGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp GCTGTCTTACATGATCAAGGAGAGAGCCCAGAGGCAAGTACTGAGTaGCAAGCTGCAGAGATGACCCTGGGCACAGTCCCAGCAGCCGTA +
Preference number: 5 (lower is better)
Translates to: AVLHDQGESPEASTE*QAAEMTLGTVPAAV
Trigger: TACGGCTGCTGGGACTGTGCCCAGGGTCATCTCTGCAGCTTGTCACTCAGTACTTGCCTCTGGGCTCTCTCCTTGATCATGTAAGACAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp TCTGGCGGCAGCAAGTCAGCCACACCAAAATCTGCCACCTGGACTTaGCTCGGTGACTTAAGCATCACATTCCGGAGCGCAAGGTCCCTA +
Preference number: 5 (lower is better)
Translates to: SGGSKSATPKSATWT*LGDLSITFRSARSL
Trigger: TAGGGACCTTGCGCTCCGGAATGTGATGCTTAAGTCACCGAGTCAAGTCCAGGTGGCAGATTTTGGTGTGGCTGACTTGCTGCCGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp ATGGAGTGGGCAACTCTGCGTACTGCCCAGAGAAGCACTGAGGTCTaGACCCACATCCATGTACTCATAGCCCAGCTCTTCCAGGGAACC +
Preference number: 5 (lower is better)
Translates to: MEWATLRTAQRSTEV*THIHVLIAQLFQGT
Trigger: GGTTCCCTGGAAGAGCTGGGCTATGAGTACATGGATGTGGGTTCAGACCTCAGTGCTTCTCTGGGCAGTACGCAGAGTTGCCCACTCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp CCATGGGATGGAGTGGGCAACTCTGCGTACTGCCCAGAGAAGCACTaGGGTCTGAACCCACATCCATGTACTCATAGCCCAGCTCTTCCA +
Preference number: 5 (lower is better)
Translates to: PWDGVGNSAYCPEKH*GLNPHPCTHSPALP
Trigger: TGGAAGAGCTGGGCTATGAGTACATGGATGTGGGTTCAGACCTCAGTGCTTCTCTGGGCAGTACGCAGAGTTGCCCACTCCATCCCATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp CTCTGGTTCATGGGCATGTATCCAGACGAAGGACTTAAAAGACTCTaGCTCCCACGTGGCCGGGTAAGCGTTCCTGTAGGCAAGCTGAGG +
Preference number: 5 (lower is better)
Translates to: LWFMGMYPDEGLKRL*LPRGRVSVPVGKLR
Trigger: CCTCAGCTTGCCTACAGGAACGCTTACCCGGCCACGTGGGAGCCAGAGTCTTTTAAGTCCTTCGTCTGGATACATGCCCATGAACCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCGCATCCTGCAACTCTTaGGTGCTCAGAGCAGATGGC +
Preference number: 5 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPASCNS*VLRADG
Trigger: GCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGC...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp GCCGGCACTCATTCTGAGCATCTGGATATTTGTAGATTGGACCTTTaGCACCTAGGATTCCATGGGGGCAGCTGTTCACACAGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: AGTHSEHLDICRLDL*HLGFHGGSCSHSGA
Trigger: GGCCCCACTGTGTGAACAGCTGCCCCCATGGAATCCTAGGTGCCAAAGGTCCAATCTACAAATATCCAGATGCTCAGAATGAGTGCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp GGAGCTGGCGCAGAGCATGGCTGGAGTTGGTATTGTAGTTCAACATaGCAAAGATGGCAAACTTCCCATCGTAGACCTGGGTTCCCCGGA +
Preference number: 5 (lower is better)
Translates to: GAGAEHGWSWYCSST*QRWQTSHRRPGFPG
Trigger: TCCGGGGAACCCAGGTCTACGATGGGAAGTTTGCCATCTTTGTCATGTTGAACTACAATACCAACTCCAGCCATGCTCTGCGCCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp CAGCAAGTCAGCCACACCAAAATCTGCCACCTGGACTTGACTCGGTaGCTTAAGCATCACATTCCGGAGCGCAAGGTCCCTATGCACCAT +
Preference number: 5 (lower is better)
Translates to: QQVSHTKICHLDLTR*LKHHIPERKVPMHH
Trigger: ATGGTGCATAGGGACCTTGCGCTCCGGAATGTGATGCTTAAGTCACCGAGTCAAGTCCAGGTGGCAGATTTTGGTGTGGCTGACTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp ATCTTCATCTTCCTCTTCGGTACCCAGCACAGAACTGAGACCTACTaGCGAAAGGGTGCCTTCCCGGGAAGAGGATGTACCTCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: IFIFLFGTQHRTETY*RKGAFPGRGCTSEV
Trigger: CACCTCAGAGGTACATCCTCTTCCCGGGAAGGCACCCTTTCGTCAGTAGGTCTCAGTTCTGTGCTGGGTACCGAAGAGGAAGATGAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGAGTCTCCCTGAGGAACGGGATCAGGAAGGGAGAGACACAGGGAAACTTCTCTCACTTCTCGGATCCATaGCAGGAAGGAAAGATCAGC +
Preference number: 5 (lower is better)
Translates to: GVSLRNGIRKGETQGNFSHFSDP*QEGKIS
Trigger: GCTGATCTTTCCTTCCTGCAATGGATCCGAGAAGTG...AGAGAAGTTTCCCTGTGTCTCTCCCTTCCTGATCCCGTTCCTCAGGGAGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACTGGTCCCTTACACCCTaGGGTGCAGTTCTCGTGGCA +
Preference number: 5 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYWSLTP*GAVLVA
Trigger: TGCCACGAGAACTGCACCCAAGGGTGTAAGGGACCA...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp CATACTCCTCATCTTCATCTTCCTCTTCGGTACCCAGCACAGAACTaGGACCTACTGACGAAAGGGTGCCTTCCCGGGAAGAGGATGTAC +
Preference number: 5 (lower is better)
Translates to: HTPHLHLPLRYPAQN*DLLTKGCLPGKRMY
Trigger: GTACATCCTCTTCCCGGGAAGGCACCCTTTCGTCAGTAGGTCTCAGTTCTGTGCTGGGTACCGAAGAGGAAGATGAAGATGAGGAGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp AATGAGCCTCATGAACAAACTCTCGGGGTTCCCCTTGCAGAACGTTaGAGTGAGTCACACAGACACCTTCCCGGCTGTAGTTTCGACAAG +
Preference number: 5 (lower is better)
Translates to: NEPHEQTLGVPLAER*SESHRHLPGCSFDK
Trigger: CTTGTCGAAACTACAGCCGGGAAGGTGTCTGTGTGACTCACTGCAACGTTCTGCAAGGGGAACCCCGAGAGTTTGTTCATGAGGCTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp TTTCCTCAGCTCTGTCTCTTTGAAGATTCTAGCCAAGACTTTGTTTaGCTTCTCGCTTGGGTCCAGAGGCTCGATGCTCTCACCCCGCTC +
Preference number: 5 (lower is better)
Translates to: FPQLCLFEDSSQDFV*LLAWVQRLDALTPL
Trigger: GAGCGGGGTGAGAGCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTCAAAGAGACAGAGCTGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp TGTCTCTTTGAAGATTCTAGCCAAGACTTTGTTTGCCTTCTCGCTTaGGTCCAGAGGCTCGATGCTCTCACCCCGCTCCAAGTAGCGTCT +
Preference number: 5 (lower is better)
Translates to: CLFEDSSQDFVCLLA*VQRLDALTPLQVAS
Trigger: AGACGCTACTTGGAGCGGGGTGAGAGCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTCAAAGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp AGGTATTCCAGGCCCACTCGCTCTCTTGATGACCAGATACCTTGGTaGGTCCCGGGCCATCCTGGTAAACTCATTGGCCAGTTCTTTAAA +
Preference number: 5 (lower is better)
Translates to: RYSRPTRSLDDQIPW*VPGHPGKLIGQFFK
Trigger: TTTAAAGAACTGGCCAATGAGTTTACCAGGATGGCCCGGGACCCACCAAGGTATCTGGTCATCAAGAGAGCGAGTGGGCCTGGAATACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp AAACCGCAGAATCCAGACAAGCCTCCCCAAGGTTGCTCTGGTTCATaGGCATGTATCCAGACGAAGGACTTAAAAGACTCTGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: KPQNPDKPPQGCSGS*ACIQTKDLKDSGSH
Trigger: GTGGGAGCCAGAGTCTTTTAAGTCCTTCGTCTGGATACATGCCCATGAACCAGAGCAACCTTGGGGAGGCTTGTCTGGATTCTGCGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTGCCAGGGGTCACCATaGAGGCCAGTGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KSLRERVWRVILHISRESCQGSP*RPVMRK
Trigger: CTTCCTCATCACTGGCCTCAATGGTGACCCCTGGCA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTCCAGTGCAGGGATCTaGTGCCAGGGGTCACCATTG +
Preference number: 5 (lower is better)
Translates to: KSLRERVWRVILHISRESSSAGI*CQGSPL
Trigger: CAATGGTGACCCCTGGCACAAGATCCCTGCACTGGA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TATGAGGATGCCTGGCTCACAGTGCATGTTCAGTTCGTAGTCACTGGTACCTACATTTGTACTCCCCAGTaGAGCAGCAGCTGTGGTCCC +
Preference number: 5 (lower is better)
Translates to: YEDAWLTVHVQFVVTGTYICTPQ*SSSCGP
Trigger: GGGACCACAGCTGCTGCTCAACTGGGGAGTACAAAT...GTAGGTACCAGTGACTACGAACTGAACATGCACTGTGAGCCAGGCATCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp GTTCCTCGAGGTAATACATACCCTTGGCAATTTGTACTCCCCAGTTaGGCAGCAGCTGTGGTCCCAGTGTCTCACGGTGCTGTCTTACAT +
Preference number: 5 (lower is better)
Translates to: VPRGNTYPWQFVLPS*AAAVVPVSHGAVLH
Trigger: ATGTAAGACAGCACCGTGAGACACTGGGACCACAGCTGCTGCTCAACTGGGGAGTACAAATTGCCAAGGGTATGTATTACCTCGAGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 90 bp AGGGCCATCCATTTAATTGGAGTCTTGGCCTCACTGTGTAGTAACTaGTTGTCATCTGGCGGCAGCAAGTCAGCCACACCAAAATCTGCC +
Preference number: 5 (lower is better)
Translates to: RAIHLIGVLASLCSN*LSSGGSKSATPKSA
Trigger: GGCAGATTTTGGTGTGGCTGACTTGCTGCCGCCAGATGACAAGCAGTTACTACACAGTGAGGCCAAGACTCCAATTAAATGGATGGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp GTCACCGCTATGACCAGGTGTGGTTTGCTCATTAATACCTCTGCTTaGCCTAAACAGTCTTGTAGTTCTGGTCCCTTACACCCTTGGGTG +
Preference number: 5 (lower is better)
Translates to: VTAMTRCGLLINTSA*PKQSCSSGPLHPWV
Trigger: CACCCAAGGGTGTAAGGGACCAGAACTACAAGACTGTTTAGGCCAAGCAGAGGTATTAATGAGCAAACCACACCTGGTCATAGCGGTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp ATACATACCCTTGGCAATTTGTACTCCCCAGTTGAGCAGCAGCTGTaGTCCCAGTGTCTCACGGTGCTGTCTTACATGATCAAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: IHTLGNLYSPVEQQL*SQCLTVLSYMIKER
Trigger: TCTCTCCTTGATCATGTAAGACAGCACCGTGAGACACTGGGACCACAGCTGCTGCTCAACTGGGGAGTACAAATTGCCAAGGGTATGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCGTGGTGGTAACAAAGTaGCTGATTGGCACTTATGTA +
Preference number: 5 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPVVVTK*LIGTYV
Trigger: TACATAAGTGCCAATCAGCAACTTTGTTACCACCAC...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 90 bp AGTTATGGGGACAACTGGCAACACAGACTCCTCCGTACTGATACTTaGTATGGGGGTTGGGCTCAAGCTGGAACGTTAGCTTGTTGTACA +
Preference number: 5 (lower is better)
Translates to: SYGDNWQHRLLRTDT*YGGWAQAGTLACCT
Trigger: TGTACAACAAGCTAACGTTCCAGCTTGAGCCCAACCCCCATATCAAGTATCAGTACGGAGGAGTCTGTGTTGCCAGTTGTCCCCATAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 90 bp AAAACTCTGCCGCCCACTCTTGTCCTCGATGACTTTAATGCAGACTaGAATCTTGATGGATTCACCCTCGGGAATCCAAATCCCCTTGTG +
Preference number: 5 (lower is better)
Translates to: KTLPPTLVLDDFNAD*NLDGFTLGNPNPLV
Trigger: CACAAGGGGATTTGGATTCCCGAGGGTGAATCCATCAAGATTCCAGTCTGCATTAAAGTCATCGAGGACAAGAGTGGGCGGCAGAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACTTATCTACTTCCATCTaGTCAGCAGGACAAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNLSTSI*SAGQAL
Trigger: CAGGGCTTGTCCTGCTGACAAGATGGAAGTAGATAA...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTCCCTGAGGAACATTCTAGCCAAGACTTaGTTTGCCTTCTCGCTTGGG +
Preference number: 5 (lower is better)
Translates to: RKGLESNPSYLQGVSLRNILAKT*FAFSLG
Trigger: CCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAAT...GTTCCTCAGGGAGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGGGTGAGGAAGGGTTACCCTCAAAGAGGCACTAGCTGCCATCAAATGTTCCCCATCCTGGTAAACTCATaGGCCAGTTCTTTAAAGGTT +
Preference number: 5 (lower is better)
Translates to: GVRKGYPQRGTSCHQMFPILVNS*ASSLKV
Trigger: AACCTTTAAAGAACTGGCCAATGAGTTTACCAGGAT...GGGGAACATTTGATGGCAGCTAGTGCCTCTTTGAGGGTAACCCTTCCTCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAAGTGTCTGGTACTGGTaGTCAGCATCGCCGGTCACA +
Preference number: 5 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVSVWYW*SASPVT
Trigger: TGTGACCGGCGATGCTGACAACCAGTACCAGACACT...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp CTCTTCTCTTTCATCTCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGAGGTTGCCCAGGATCTaGGTACAGTTCACGAACCCA +
Preference number: 5 (lower is better)
Translates to: LFSFISPSLESDWGRKAKRLPRI*VQFTNP
Trigger: TGGGTTCGTGAACTGTACCAAGATCCTGGGCAACCT...CTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGAGATGAAAGAGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCCAAGCCTCCCCAAGGTaGCTCTGGTTCATGGGCATG +
Preference number: 5 (lower is better)
Translates to: SPSLESDWGRKAKFKSLIQASPR*LWFMGM
Trigger: CATGCCCATGAACCAGAGCAACCTTGGGGAGGCTTG...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTCCGGCTCCTACACATaGATACTCTCTCTTGGAGTT +
Preference number: 5 (lower is better)
Translates to: KSLRERVWRVILHISRESSGSYT*ILSLGV
Trigger: AACTCCAAGAGAGAGTATCAATGTGTAGGAGCCGGA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AAGAGCCTGAGAGAAAGGGTCTGGAGAGTAATCCTTCATATCTCCAGGGAGTCTTGTCCCTCCAGTCAATaGTATCCATGTGGCAAAGTT +
Preference number: 5 (lower is better)
Translates to: KSLRERVWRVILHISRESCPSSQ*YPCGKV
Trigger: AACTTTGCCACATGGATACAATTGACTGGAGGGACA...AGACTCCCTGGAGATATGAAGGATTACTCTCCAGACCCTTTCTCTCAGGCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTAGTGGATCACACACTTaGCCCTCTGCCACGCATTCT +
Preference number: 5 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVSGSHT*PSATHS
Trigger: AGAATGCGTGGCAGAGGGCAAAGTGTGTGATCCACT...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCCTCTGCCGCCCACTCTaGTCCTCGATGACTTTAATG +
Preference number: 5 (lower is better)
Translates to: SPSLESDWGRKAKFKSLILCRPL*SSMTLM
Trigger: CATTAAAGTCATCGAGGACAAGAGTGGGCGGCAGAG...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCATACCCTTGGCAATTaGTACTCCCCAGTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVHTLGN*YSPVEQ
Trigger: CTGCTCAACTGGGGAGTACAAATTGCCAAGGGTATG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TTTAAGAGTCTAATCCCAATGAGTAAGAGCCTGAGAGAAAGGGTCTGGAGAGTAGGAATCCAAATCCCCTaGTGTACAGTTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: FKSLIPMSKSLRERVWRVGIQIP*CTVPKT
Trigger: TGTCTTTGGAACTGTACACAAGGGGATTTGGATTCC...TACTCTCCAGACCCTTTCTCTCAGGCTCTTACTCATTGGGATTAGACTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp TCCCCTTCTTTAGAGTCTGATTGGGGAAGAAAGGCAAAGTTTAAGAGTCTAATCCTGGATATTTGTAGATaGGACCTTTGGCACCTAGGA +
Preference number: 5 (lower is better)
Translates to: SPSLESDWGRKAKFKSLILDICR*DLWHLG
Trigger: TCCTAGGTGCCAAAGGTCCAATCTACAAATATCCAG...GATTAGACTCTTAAACTTTGCCTTTCTTCCCCAATCAGACTCTAAAGAAGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp AGGTTTGAAGATGGATCCTCTTTCTATCCCACCAGAAGTTTATCACTACTGGTTCTCAGCTCTGTCTCTTaGAAGATTCTAGCCAAGACT +
Preference number: 5 (lower is better)
Translates to: RFEDGSSFYPTRSLSLLVLSSVS*KILAKT
Trigger: AGTCTTGGCTAGAATCTTCAAAGAGACAGAGCTGAG...AACCAGTAGTGATAAACTTCTGGTGGGATAGAAAGAGGATCCATCTTCAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS-3UTR CAA 90 bp GGGCCCAAAGGGCAAGTCCTGCTATTAATTCAAATGTGTCAAAGAAATGGTTTTCAAGGCTCACACATCTaGAGTCCATTCTTATCTACT +
Preference number: 5 (lower is better)
Translates to: GPKGQVLLLIQMCQRNGFQGSHI*SPFLST
Trigger: AGTAGATAAGAATGGACTCAAGATGTGTGAGCCTTG...AAAACCATTTCTTTGACACATTTGAATTAATAGCAGGACTTGCCCTTTGGGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp GGGCGCATCGAGCACAAGCGTCGGAGCCCGAGCCATTaGACGTGCTGGTGCCCTCCATGGGCTGGCATTCTG +
Preference number: 6 (lower is better)
Translates to: GRIEHKRRSPSH*TCWCPPWAGIL
Trigger: CAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTCGATGCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GAGCACAAGCGTCGGAGCCCGAGCCATTGCACGTGCTaGTGCCCTCCATGGGCTGGCATTCTGGATGGCAGG +
Preference number: 6 (lower is better)
Translates to: EHKRRSPSHCTC*CPPWAGILDGR
Trigger: CCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp TGGGCGCATCGAGCACAAGCGTCGGAGCCCGAGCCATaGCACGTGCTGGTGCCCTCCATGGGCTGGCATTCT +
Preference number: 6 (lower is better)
Translates to: WAHRAQASEPEP*HVLVPSMGWHS
Trigger: AGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTCGATGCGCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp CACAAGCGTCGGAGCCCGAGCCATTGCACGTGCTGGTaGCCTCCATGGGCTGGCATTCTGGATGGCAGGAGA +
Preference number: 6 (lower is better)
Translates to: HKRRSPSHCTCW*PPWAGILDGRR
Trigger: TCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp ATCGAGCACAAGCGTCGGAGCCCGAGCCATTGCACGTaGTGGTGCCCTCCATGGGCTGGCATTCTGGATGGC +
Preference number: 6 (lower is better)
Translates to: IEHKRRSPSHCT*WCPPWAGILDG
Trigger: GCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAATGGCTCGGGCTCCGACGCTTGTGCTCGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp ATACCCTTGTTCAGCTGCTGGGCAGGCCCCCATAGCTaGATAATCCCCTCCGGAACCGCCCGCACCACGCCT +
Preference number: 6 (lower is better)
Translates to: IPLFSCWAGPHS*IIPSGTARTTP
Trigger: AGGCGTGGTGCGGGCGGTTCCGGAGGGGATTATGCAGCTATGGGGGCCTGCCCAGCAGCTGAACAAGGGTAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GGGCAGCTGTTCACACAGTGGGGCCCATCACGAAAATaGGCGCATCGAGCACAAGCGTCGGAGCCCGAGCCA +
Preference number: 6 (lower is better)
Translates to: GQLFTQWGPSRK*AHRAQASEPEP
Trigger: TGGCTCGGGCTCCGACGCTTGTGCTCGATGCGCCCATTTTCGTGATGGGCCCCACTGTGTGAACAGCTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp GAGCCCGTCACATGGCCCTCTGATGACTCTGACGTTTaGCGCCCCCGTGGGATCGGGTGCAGAGAGATGGGA +
Preference number: 6 (lower is better)
Translates to: EPVTWPSDDSDV*RPRGIGCREMG
Trigger: TCCCATCTCTCTGCACCCGATCCCACGGGGGCGTCAAACGTCAGAGTCATCAGAGGGCCATGTGACGGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp CGTGCCAGCAGAGGGCACGATGGCCATGGGATGGAGTaGGCAACTCTGCGTACTGCCCAGAGAAGCACTGAG +
Preference number: 6 (lower is better)
Translates to: RASRGHDGHGME*ATLRTAQRSTE
Trigger: CTCAGTGCTTCTCTGGGCAGTACGCAGAGTTGCCCACTCCATCCCATGGCCATCGTGCCCTCTGCTGGCACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp CATCTGGAGTCGTGCCAGCAGAGGGCACGATGGCCATaGGATGGAGTGGGCAACTCTGCGTACTGCCCAGAG +
Preference number: 6 (lower is better)
Translates to: HLESCQQRARWP*DGVGNSAYCPE
Trigger: CTCTGGGCAGTACGCAGAGTTGCCCACTCCATCCCATGGCCATCGTGCCCTCTGCTGGCACGACTCCAGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp GCGCTGGACACCTGGGCACACAGGCACCACTGTCATTaGAGTGTCGGCAGGCGAAGCAATCTGTGTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ALDTWAHRHHCH*SVGRRSNLCPG
Trigger: CCCAGGACACAGATTGCTTCGCCTGCCGACACTTCAATGACAGTGGTGCCTGTGTGCCCAGGTGTCCAGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp GAGGGCACGATGGCCATGGGATGGAGTGGGCAACTCTaGGTACTGCCCAGAGAAGCACTGAGGTCTGAACCC +
Preference number: 6 (lower is better)
Translates to: EGTMAMGWSGQL*VLPREALRSEP
Trigger: GGGTTCAGACCTCAGTGCTTCTCTGGGCAGTACGCAGAGTTGCCCACTCCATCCCATGGCCATCGTGCCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp TCCTGGGGTCCAGAGCAGCCACCTGCACATTCATCGTaGCAGCACTGGTTAGGATTGGGCCCGAAGCAGCGA +
Preference number: 6 (lower is better)
Translates to: SWGPEQPPAHSS*QHWLGLGPKQR
Trigger: TCGCTGCTTCGGGCCCAATCCTAACCAGTGCTGCCACGATGAATGTGCAGGTGGCTGCTCTGGACCCCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp GGCGCTGGACACCTGGGCACACAGGCACCACTGTCATaGAAGTGTCGGCAGGCGAAGCAATCTGTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: GAGHLGTQAPLS*KCRQAKQSVSW
Trigger: CCAGGACACAGATTGCTTCGCCTGCCGACACTTCAATGACAGTGGTGCCTGTGTGCCCAGGTGTCCAGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp CAGCATCCCCCAGAGGAGCACAGTGGATCACACACTTaGCCCTCTGCCACGCATTCTCCCAGAGGCCGGTTG +
Preference number: 6 (lower is better)
Translates to: QHPPEEHSGSHT*PSATHSPRGRL
Trigger: CAACCGGCCTCTGGGAGAATGCGTGGCAGAGGGCAAAGTGTGTGATCCACTGTGCTCCTCTGGGGGATGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp AGCATCCCCCAGAGGAGCACAGTGGATCACACACTTTaGCCTCTGCCACGCATTCTCCCAGAGGCCGGTTGT +
Preference number: 6 (lower is better)
Translates to: SIPQRSTVDHTL*PLPRILPEAGC
Trigger: ACAACCGGCCTCTGGGAGAATGCGTGGCAGAGGGCAAAGTGTGTGATCCACTGTGCTCCTCTGGGGGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp ACTTTGCCCTCTGCCACGCATTCTCCCAGAGGCCGGTaGTACTTGATGTCAAGTCTCTCCTCTGCGGGCCCC +
Preference number: 6 (lower is better)
Translates to: TLPSATHSPRGR*YLMSSLSSAGP
Trigger: GGGGCCCGCAGAGGAGAGACTTGACATCAAGTACAACCGGCCTCTGGGAGAATGCGTGGCAGAGGGCAAAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp GGATCACACACTTTGCCCTCTGCCACGCATTCTCCCAGAGGCCGGTaGTACTTGATGTCAAGTCTCTCCTCTGCGGGCCCCCGCAGAAGT +
Preference number: 6 (lower is better)
Translates to: GSHTLPSATHSPRGR*YLMSSLSSAGPRRS
Trigger: ACTTCTGCGGGGGCCCGCAGAGGAGAGACTTGACATCAAGTACAACCGGCCTCTGGGAGAATGCGTGGCAGAGGGCAAAGTGTGTGATCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp CAGAGGCCGGTTGTACTTGATGTCAAGTCTCTCCTCTaGGGGCCCCCGCAGAAGTCTGGTCCAGTTCAGAGA +
Preference number: 6 (lower is better)
Translates to: QRPVVLDVKSLL*GPPQKSGPVQR
Trigger: TCTCTGAACTGGACCAGACTTCTGCGGGGGCCCGCAGAGGAGAGACTTGACATCAAGTACAACCGGCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp AGGTCGAGGTCCAGGTCTGGCTCCAGCTCTGCATCCTaGAACTCTTTGGTGCTCAGAGCAGATGGCTCTGCT +
Preference number: 6 (lower is better)
Translates to: RSRSRSGSSSAS*NSLVLRADGSA
Trigger: AGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTGGAGCCAGACCTGGACCTCGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GGCACAGATGGTCTTGGTCAATATCTGGCAGTCTTCTaGTCCAGGCCCCCAGCATCGCCCCTTGCAGACTTC +
Preference number: 6 (lower is better)
Translates to: GTDGLGQYLAVF*SRPPASPLADF
Trigger: GAAGTCTGCAAGGGGCGATGCTGGGGGCCTGGACCAGAAGACTGCCAGATATTGACCAAGACCATCTGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GCACCTAGGATTCCATGGGGGCAGCTGTTCACACAGTaGGGCCCATCACGAAAATGGGCGCATCGAGCACAA +
Preference number: 6 (lower is better)
Translates to: APRIPWGQLFTQ*GPSRKWAHRAQ
Trigger: TTGTGCTCGATGCGCCCATTTTCGTGATGGGCCCCACTGTGTGAACAGCTGCCCCCATGGAATCCTAGGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp AGGCCCACTCGCTCTCTTGATGACCAGATACCTTGGTaGGTCCCGGGCCATCCTGGTAAACTCATTGGCCAG +
Preference number: 6 (lower is better)
Translates to: RPTRSLDDQIPW*VPGHPGKLIGQ
Trigger: CTGGCCAATGAGTTTACCAGGATGGCCCGGGACCCACCAAGGTATCTGGTCATCAAGAGAGCGAGTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp TCCAGGCCCACTCGCTCTCTTGATGACCAGATACCTTaGTGGGTCCCGGGCCATCCTGGTAAACTCATTGGC +
Preference number: 6 (lower is better)
Translates to: SRPTRSLDDQIP*WVPGHPGKLIG
Trigger: GCCAATGAGTTTACCAGGATGGCCCGGGACCCACCAAGGTATCTGGTCATCAAGAGAGCGAGTGGGCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp CCCAGAGGAGCACAGTGGATCACACACTTTGCCCTCTaGCACGCATTCTCCCAGAGGCCGGTTGTACTTGAT +
Preference number: 6 (lower is better)
Translates to: PRGAQWITHFAL*HAFSQRPVVLD
Trigger: ATCAAGTACAACCGGCCTCTGGGAGAATGCGTGGCAGAGGGCAAAGTGTGTGATCCACTGTGCTCCTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp GGTCTGGCTCCAGCTCTGCATCCTGCAACTCTTTGGTaGTCAGAGCAGATGGCTCTGCTGCAGGAGGTATTC +
Preference number: 6 (lower is better)
Translates to: GLAPALHPATLW*SEQMALLQEVF
Trigger: GAATACCTCCTGCAGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGATGCAGAGCTGGAGCCAGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp CTGGAAAGCTCGCATTTCCTCATACCCTTGTTCAGCTaGTGGGCAGGCCCCCATAGCTGCATAATCCCCTCC +
Preference number: 6 (lower is better)
Translates to: LESSHFLIPLFS*WAGPHSCIIPS
Trigger: GGAGGGGATTATGCAGCTATGGGGGCCTGCCCAGCAGCTGAACAAGGGTATGAGGAAATGCGAGCTTTCCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GCCCGAAGCAGCGACCGTTACACTGAGGGGCACAGATaGTCTTGGTCAATATCTGGCAGTCTTCTGGTCCAG +
Preference number: 6 (lower is better)
Translates to: ARSSDRYTEGHR*SWSISGSLLVQ
Trigger: CTGGACCAGAAGACTGCCAGATATTGACCAAGACCATCTGTGCCCCTCAGTGTAACGGTCGCTGCTTCGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GAAAGCTCGCATTTCCTCATACCCTTGTTCAGCTGCTaGGCAGGCCCCCATAGCTGCATAATCCCCTCCGGA +
Preference number: 6 (lower is better)
Translates to: ESSHFLIPLFSC*AGPHSCIIPSG
Trigger: TCCGGAGGGGATTATGCAGCTATGGGGGCCTGCCCAGCAGCTGAACAAGGGTATGAGGAAATGCGAGCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp TTCCTCTTCGGTACCCAGCACAGAACTGAGACCTACTaGCGAAAGGGTGCCTTCCCGGGAAGAGGATGTACC +
Preference number: 6 (lower is better)
Translates to: FLFGTQHRTETY*RKGAFPGRGCT
Trigger: GGTACATCCTCTTCCCGGGAAGGCACCCTTTCGTCAGTAGGTCTCAGTTCTGTGCTGGGTACCGAAGAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp GGAGTGGGCAACTCTGCGTACTGCCCAGAGAAGCACTaGGGTCTGAACCCACATCCATGTACTCATAGCCCA +
Preference number: 6 (lower is better)
Translates to: GVGNSAYCPEKH*GLNPHPCTHSP
Trigger: TGGGCTATGAGTACATGGATGTGGGTTCAGACCTCAGTGCTTCTCTGGGCAGTACGCAGAGTTGCCCACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp AACAGTCTTGTAGTTCTGGTCCCTTACACCCTTGGGTaGAGTTCTCGTGGCAGGGCCGGCACTCATTCTGAG +
Preference number: 6 (lower is better)
Translates to: NSLVVLVPYTLG*SSRGRAGTHSE
Trigger: CTCAGAATGAGTGCCGGCCCTGCCACGAGAACTGCACCCAAGGGTGTAAGGGACCAGAACTACAAGACTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp ATCCTGCAACTCTTTGGTGCTCAGAGCAGATGGCTCTaGTGCAGGAGGTATTCCAGGCCCACTCGCTCTCTT +
Preference number: 6 (lower is better)
Translates to: ILQLFGAQSRWL*CRRYSRPTRSL
Trigger: AAGAGAGCGAGTGGGCCTGGAATACCTCCTGCAGCAGAGCCATCTGCTCTGAGCACCAAAGAGTTGCAGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp TGTCAAGTCTCTCCTCTGCGGGCCCCCGCAGAAGTCTaGTCCAGTTCAGAGAGTGGTGGTAACAAAGTTGCT +
Preference number: 6 (lower is better)
Translates to: CQVSPLRAPAEV*SSSESGGNKVA
Trigger: AGCAACTTTGTTACCACCACTCTCTGAACTGGACCAGACTTCTGCGGGGGCCCGCAGAGGAGAGACTTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp CGTGGCAGGGCCGGCACTCATTCTGAGCATCTGGATATTTGTAGATaGGACCTTTGGCACCTAGGATTCCATGGGGGCAGCTGTTCACAC +
Preference number: 6 (lower is better)
Translates to: RGRAGTHSEHLDICR*DLWHLGFHGGSCSH
Trigger: GTGTGAACAGCTGCCCCCATGGAATCCTAGGTGCCAAAGGTCCAATCTACAAATATCCAGATGCTCAGAATGAGTGCCGGCCCTGCCACG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp AGCCACACCAAAATCTGCCACCTGGACTTGACTCGGTaGCTTAAGCATCACATTCCGGAGCGCAAGGTCCCT +
Preference number: 6 (lower is better)
Translates to: SHTKICHLDLTR*LKHHIPERKVP
Trigger: AGGGACCTTGCGCTCCGGAATGTGATGCTTAAGTCACCGAGTCAAGTCCAGGTGGCAGATTTTGGTGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp GCAACTCTGCGTACTGCCCAGAGAAGCACTGAGGTCTaGACCCACATCCATGTACTCATAGCCCAGCTCTTC +
Preference number: 6 (lower is better)
Translates to: ATLRTAQRSTEV*THIHVLIAQLF
Trigger: GAAGAGCTGGGCTATGAGTACATGGATGTGGGTTCAGACCTCAGTGCTTCTCTGGGCAGTACGCAGAGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp ATTGCACGTGCTGGTGCCCTCCATGGGCTGGCATTCTaGATGGCAGGAGAAGCAATGAGCCTCATGAACAAA +
Preference number: 6 (lower is better)
Translates to: IARAGALHGLAF*MAGEAMSLMNK
Trigger: TTTGTTCATGAGGCTCATTGCTTCTCCTGCCATCCAGAATGCCAGCCCATGGAGGGCACCAGCACGTGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp GAAGATTCTAGCCAAGACTTTGTTTGCCTTCTCGCTTaGGTCCAGAGGCTCGATGCTCTCACCCCGCTCCAA +
Preference number: 6 (lower is better)
Translates to: EDSSQDFVCLLA*VQRLDALTPLQ
Trigger: TTGGAGCGGGGTGAGAGCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp GGTAATACATACCCTTGGCAATTTGTACTCCCCAGTTaGGCAGCAGCTGTGGTCCCAGTGTCTCACGGTGCT +
Preference number: 6 (lower is better)
Translates to: GNTYPWQFVLPS*AAAVVPVSHGA
Trigger: AGCACCGTGAGACACTGGGACCACAGCTGCTGCTCAACTGGGGAGTACAAATTGCCAAGGGTATGTATTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp AGCAAGTCAGCCACACCAAAATCTGCCACCTGGACTTaGCTCGGTGACTTAAGCATCACATTCCGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: SKSATPKSATWT*LGDLSITFRSA
Trigger: TGCGCTCCGGAATGTGATGCTTAAGTCACCGAGTCAAGTCCAGGTGGCAGATTTTGGTGTGGCTGACTTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp GCATCACATTCCGGAGCGCAAGGTCCCTATGCACCATaGTGTGTTCCTCGAGGTAATACATACCCTTGGCAA +
Preference number: 6 (lower is better)
Translates to: ASHSGAQGPYAP*CVPRGNTYPWQ
Trigger: TTGCCAAGGGTATGTATTACCTCGAGGAACACAGCATGGTGCATAGGGACCTTGCGCTCCGGAATGTGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp CTTGGCAATTTGTACTCCCCAGTTGAGCAGCAGCTGTaGTCCCAGTGTCTCACGGTGCTGTCTTACATGATC +
Preference number: 6 (lower is better)
Translates to: LGNLYSPVEQQL*SQCLTVLSYMI
Trigger: GATCATGTAAGACAGCACCGTGAGACACTGGGACCACAGCTGCTGCTCAACTGGGGAGTACAAATTGCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp GCAATGAGCCTCATGAACAAACTCTCGGGGTTCCCCTaGCAGAACGTTGCAGTGAGTCACACAGACACCTTC +
Preference number: 6 (lower is better)
Translates to: AMSLMNKLSGFP*QNVAVSHTDTF
Trigger: GAAGGTGTCTGTGTGACTCACTGCAACGTTCTGCAAGGGGAACCCCGAGAGTTTGTTCATGAGGCTCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp GCCGGCACTCATTCTGAGCATCTGGATATTTGTAGATaGGACCTTTGGCACCTAGGATTCCATGGGGGCAGC +
Preference number: 6 (lower is better)
Translates to: AGTHSEHLDICR*DLWHLGFHGGS
Trigger: GCTGCCCCCATGGAATCCTAGGTGCCAAAGGTCCAATCTACAAATATCCAGATGCTCAGAATGAGTGCCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp GCTGTGTTCCTCGAGGTAATACATACCCTTGGCAATTaGTACTCCCCAGTTGAGCAGCAGCTGTGGTCCCAG +
Preference number: 6 (lower is better)
Translates to: AVFLEVIHTLGN*YSPVEQQLWSQ
Trigger: CTGGGACCACAGCTGCTGCTCAACTGGGGAGTACAAATTGCCAAGGGTATGTATTACCTCGAGGAACACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp GCCATCCATTTAATTGGAGTCTTGGCCTCACTGTGTAGTAACTGCTaGTCATCTGGCGGCAGCAAGTCAGCCACACCAAAATCTGCCACC +
Preference number: 6 (lower is better)
Translates to: AIHLIGVLASLCSNC*SSGGSKSATPKSAT
Trigger: GGTGGCAGATTTTGGTGTGGCTGACTTGCTGCCGCCAGATGACAAGCAGTTACTACACAGTGAGGCCAAGACTCCAATTAAATGGATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp GACAACTGGCAACACAGACTCCTCCGTACTGATACTTaGTATGGGGGTTGGGCTCAAGCTGGAACGTTAGCT +
Preference number: 6 (lower is better)
Translates to: DNWQHRLLRTDT*YGGWAQAGTLA
Trigger: AGCTAACGTTCCAGCTTGAGCCCAACCCCCATATCAAGTATCAGTACGGAGGAGTCTGTGTTGCCAGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp ACCGCAGAATCCAGACAAGCCTCCCCAAGGTTGCTCTaGTTCATGGGCATGTATCCAGACGAAGGACTTAAA +
Preference number: 6 (lower is better)
Translates to: TAESRQASPRLL*FMGMYPDEGLK
Trigger: TTTAAGTCCTTCGTCTGGATACATGCCCATGAACCAGAGCAACCTTGGGGAGGCTTGTCTGGATTCTGCGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp AGGCCAGTGATGAGGAAGTCCAGGTTGCCCAGGATCTaGGTACAGTTCACGAACCCATCGATATTGCTAGAG +
Preference number: 6 (lower is better)
Translates to: RPVMRKSRLPRI*VQFTNPSILLE
Trigger: CTCTAGCAATATCGATGGGTTCGTGAACTGTACCAAGATCCTGGGCAACCTGGACTTCCTCATCACTGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp TACCTTGGTGGGTCCCGGGCCATCCTGGTAAACTCATaGGCCAGTTCTTTAAAGGTTGGGCGAATATTCTCG +
Preference number: 6 (lower is better)
Translates to: YLGGSRAILVNS*ASSLKVGRIFS
Trigger: CGAGAATATTCGCCCAACCTTTAAAGAACTGGCCAATGAGTTTACCAGGATGGCCCGGGACCCACCAAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp CCCCCGCAGAAGTCTGGTCCAGTTCAGAGAGTGGTGGTAACAAAGTaGCTGATTGGCACTTATGTAGACACGCCCAGCACTAATTTCCTT +
Preference number: 6 (lower is better)
Translates to: PPQKSGPVQRVVVTK*LIGTYVDTPSTNFL
Trigger: AAGGAAATTAGTGCTGGGCGTGTCTACATAAGTGCCAATCAGCAACTTTGTTACCACCACTCTCTGAACTGGACCAGACTTCTGCGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp CTCTGTCTCTTTGAAGATTCTAGCCAAGACTTTGTTTaGCTTCTCGCTTGGGTCCAGAGGCTCGATGCTCTC +
Preference number: 6 (lower is better)
Translates to: LCLFEDSSQDFV*LLAWVQRLDAL
Trigger: GAGAGCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTCAAAGAGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS GCA 72 bp CATTTAATTGGAGTCTTGGCCTCACTGTGTAGTAACTaGTTGTCATCTGGCGGCAGCAAGTCAGCCACACCA +
Preference number: 6 (lower is better)
Translates to: HLIGVLASLCSN*LSSGGSKSATP
Trigger: TGGTGTGGCTGACTTGCTGCCGCCAGATGACAAGCAGTTACTACACAGTGAGGCCAAGACTCCAATTAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp CTCAGCTCTGTCTCTTTGAAGATTCTAGCCAAGACTTaGTTTGCCTTCTCGCTTGGGTCCAGAGGCTCGATG +
Preference number: 6 (lower is better)
Translates to: LSSVSLKILAKT*FAFSLGSRGSM
Trigger: CATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTCAAAGAGACAGAGCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp TTAAGTTTCCTCAGCTCTGTCTCTTTGAAGATTCTAGCCAAGACTTaGTTTGCCTTCTCGCTTGGGTCCAGAGGCTCGATGCTCTCACCC +
Preference number: 6 (lower is better)
Translates to: LSFLSSVSLKILAKT*FAFSLGSRGSMLSP
Trigger: GGGTGAGAGCATCGAGCCTCTGGACCCAAGCGAGAAGGCAAACAAAGTCTTGGCTAGAATCTTCAAAGAGACAGAGCTGAGGAAACTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp TGCCGCCCACTCTTGTCCTCGATGACTTTAATGCAGACTGGAATCTaGATGGATTCACCCTCGGGAATCCAAATCCCCTTGTGTACAGTT +
Preference number: 6 (lower is better)
Translates to: CRPLLSSMTLMQTGI*MDSPSGIQIPLCTV
Trigger: AACTGTACACAAGGGGATTTGGATTCCCGAGGGTGAATCCATCAAGATTCCAGTCTGCATTAAAGTCATCGAGGACAAGAGTGGGCGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp ATGACCAGATACCTTGGTGGGTCCCGGGCCATCCTGGTAAACTCATaGGCCAGTTCTTTAAAGGTTGGGCGAATATTCTCGTCAATCATC +
Preference number: 6 (lower is better)
Translates to: MTRYLGGSRAILVNS*ASSLKVGRIFSSII
Trigger: GATGATTGACGAGAATATTCGCCCAACCTTTAAAGAACTGGCCAATGAGTTTACCAGGATGGCCCGGGACCCACCAAGGTATCTGGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp CCGCCCACTCTTGTCCTCGATGACTTTAATGCAGACTaGAATCTTGATGGATTCACCCTCGGGAATCCAAAT +
Preference number: 6 (lower is better)
Translates to: PPTLVLDDFNAD*NLDGFTLGNPN
Trigger: ATTTGGATTCCCGAGGGTGAATCCATCAAGATTCCAGTCTGCATTAAAGTCATCGAGGACAAGAGTGGGCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp AATCCAGACAAGCCTCCCCAAGGTTGCTCTGGTTCATaGGCATGTATCCAGACGAAGGACTTAAAAGACTCT +
Preference number: 6 (lower is better)
Translates to: NPDKPPQGCSGS*ACIQTKDLKDS
Trigger: AGAGTCTTTTAAGTCCTTCGTCTGGATACATGCCCATGAACCAGAGCAACCTTGGGGAGGCTTGTCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp AAGTCTGGTCCAGTTCAGAGAGTGGTGGTAACAAAGTaGCTGATTGGCACTTATGTAGACACGCCCAGCACT +
Preference number: 6 (lower is better)
Translates to: KSGPVQRVVVTK*LIGTYVDTPST
Trigger: AGTGCTGGGCGTGTCTACATAAGTGCCAATCAGCAACTTTGTTACCACCACTCTCTGAACTGGACCAGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 90 bp CCACTATCTCAGCGTCTGGAACCCTCACGATGTCCCTCCAGTCAATaGTATCCATGTGGCAAAGTTTGTCATTCTTCTCAATGTAAACGC +
Preference number: 6 (lower is better)
Translates to: PLSQRLEPSRCPSSQ*YPCGKVCHSSQCKR
Trigger: GCGTTTACATTGAGAAGAATGACAAACTTTGCCACATGGATACAATTGACTGGAGGGACATCGTGAGGGTTCCAGACGCTGAGATAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp ATCTTGTCAGCAGGACAAGCCCTGACACAAAATGTCTaGTCCACCACAAAGTTATGGGGACAACTGGCAACA +
Preference number: 6 (lower is better)
Translates to: ILSAGQALTQNV*STTKLWGQLAT
Trigger: TGTTGCCAGTTGTCCCCATAACTTTGTGGTGGATCAGACATTTTGTGTCAGGGCTTGTCCTGCTGACAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS TCA 72 bp TCAGGAAGATCACAGTCAGTCCTACTGTCACCGCTATaGCCAGGTGTGGTTTGCTCATTAATACCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: SGRSQSVLLSPL*PGVVCSLIPLL
Trigger: AAGCAGAGGTATTAATGAGCAAACCACACCTGGTCATAGCGGTGACAGTAGGACTGACTGTGATCTTCCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp CAGCGTCTGGAACCCTCACGATGTCCCTCCAGTCAATaGTATCCATGTGGCAAAGTTTGTCATTCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: QRLEPSRCPSSQ*YPCGKVCHSSQ
Trigger: TTGAGAAGAATGACAAACTTTGCCACATGGATACAATTGACTGGAGGGACATCGTGAGGGTTCCAGACGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CAA 72 bp CTCTTGTCCTCGATGACTTTAATGCAGACTGGAATCTaGATGGATTCACCCTCGGGAATCCAAATCCCCTTG +
Preference number: 6 (lower is better)
Translates to: LLSSMTLMQTGI*MDSPSGIQIPL
Trigger: CAAGGGGATTTGGATTCCCGAGGGTGAATCCATCAAGATTCCAGTCTGCATTAAAGTCATCGAGGACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7
CDS CCA 72 bp ATGACCAGGTGTGGTTTGCTCATTAATACCTCTGCTTaGCCTAAACAGTCTTGTAGTTCTGGTCCCTTACAC +
Preference number: 6 (lower is better)
Translates to: MTRCGLLINTSA*PKQSCSSGPLH
Trigger: GTGTAAGGGACCAGAACTACAAGACTGTTTAGGCCAAGCAGAGGTATTAATGAGCAAACCACACCTGGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000082059.7