Pregenerated sensors for ERBB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062312Ensembl transcript IDs: ENSMUST00000058295.6
Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR CCA 90 bp | CGAGCGAGGTTCCTCAGGGCACGTTCCTGGCATAGCCGGCTGCCCTaGATGTCATGTGGCCAGAGGACCTTCTCCCTGCTTTGTGGCGGG | + |
Preference number: 1 (lower is better) Translates to: RARFLRARSWHSRLP*MSCGQRTFSLLCGG Trigger: CCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGCAGCCGGCTATGCCAGGAACGTGCCCTGAGGAACCTCGCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR GCA 90 bp | ATAGCCGGCTGCCCTGGATGTCATGTGGCCAGAGGACCTTCTCCCTaGTTTGTGGCGGGCGATGGAGACCACAAGTTAGGCCTTCCTTCC | + |
Preference number: 1 (lower is better) Translates to: IAGCPGCHVARGPSP*FVAGDGDHKLGLPS Trigger: GGAAGGAAGGCCTAACTTGTGGTCTCCATCGCCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGCAGCCGGCTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR GCA 90 bp | TGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATaGACGTGCCTCAGTCCTAGTGGGGTGTCCTGCTCCCAGGATATT | + |
Preference number: 1 (lower is better) Translates to: CTKTSLGASAVPLLG*TCLSPSGVSCSQDI Trigger: AATATCCTGGGAGCAGGACACCCCACTAGGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CCA 90 bp | ATGTCATGTGGCCAGAGGACCTTCTCCCTGCTTTGTGGCGGGCGATaGAGACCACAAGTTAGGCCTTCCTTCCCCACTCTGAAGACAGAG | + |
Preference number: 1 (lower is better) Translates to: MSCGQRTFSLLCGGR*RPQVRPSFPTLKTE Trigger: CTCTGTCTTCAGAGTGGGGAAGGAAGGCCTAACTTGTGGTCTCCATCGCCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCCACATGACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CCA 90 bp | TTCCTGGATGGATACTTCTTTCTAAGGCAAGGAAAACAAGTCACATaGCAATGCTCTCCACAAGCTCCCCTCTCCCACTGGGAGGACAGG | + |
Preference number: 1 (lower is better) Translates to: FLDGYFFLRQGKQVT*QCSPQAPLSHWEDR Trigger: CCTGTCCTCCCAGTGGGAGAGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAGAAGTATCCATCCAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR TCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCGTAATCCTCTGGGGCTaGACAGTGTGCTGTCTCTTC | + |
Preference number: 2 (lower is better) Translates to: RPVWVQVLSPSWDARASVVILWG*TVCCLF Trigger: GAAGAGACAGCACACTGTTCAGCCCCAGAGGATTAC...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR CCA 90 bp | TGCCAAAGGGCCTTCAGAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCGCCCTGGATGTCATGTaGCCAGAGGACCTTCTCCCT | + |
Preference number: 2 (lower is better) Translates to: CQRAFRRNPNSPVPQAQSALDVM*PEDLLP Trigger: AGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGC...GCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTCTGAAGGCCCTTTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR TCA 90 bp | CACTCAGGATTGAAGCATCGAGCGAGGTTCCTCAGGGCACGTTCCTGGCATAGCCTTCCTTCCCCACTCTaGAGACAGAGGATGTCTGCA | + |
Preference number: 2 (lower is better) Translates to: HSGLKHRARFLRARSWHSLPSPL*RQRMSA Trigger: TGCAGACATCCTCTGTCTTCAGAGTGGGGAAGGAAG...GCTATGCCAGGAACGTGCCCTGAGGAACCTCGCTCGATGCTTCAATCCTGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR GCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTGGGGCCTCCTCCCTTaGAGGCTGAGCTTCCCTCAG | + |
Preference number: 2 (lower is better) Translates to: EGILTPQSLKPKAKLSQTWGLLP*RLSFPQ Trigger: CTGAGGGAAGCTCAGCCTGCAAGGGAGGAGGCCCCA...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR GCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCAGTCCCCCTCTTGGGATaGACGTGCCTCAGTCCTAGT | + |
Preference number: 2 (lower is better) Translates to: GPGPLSDIGWGPVILQISVPLLG*TCLSPS Trigger: ACTAGGACTGAGGCACGTGCATCCCAAGAGGGGGAC...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR TCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGTCCTCCCTTGCAGGCTaGGCTTCCCTCAGTCTTCAG | + |
Preference number: 2 (lower is better) Translates to: KINSVQRPVWVQVLSPSWSSLAG*ASLSLQ Trigger: CTGAAGACTGAGGGAAGCTCAGCCTGCAAGGGAGGA...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR TCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTAACCACTCAGGATTaGAGCATCGAGCGAGGTTCC | + |
Preference number: 2 (lower is better) Translates to: EGILTPQSLKPKAKLSQTLTTQD*SIERGS Trigger: GGAACCTCGCTCGATGCTTCAATCCTGAGTGGTTAA...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR GCA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCTTTTACAAATCTCATTaGAAATGGAGAAAGGGGACA | + |
Preference number: 2 (lower is better) Translates to: VSNFWKISTHSLQEELCVFYKSH*KWRKGT Trigger: TGTCCCCTTTCTCCATTTGCAATGAGATTTGTAAAA...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR GCA 72 bp | ACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATaGACGTGCCTCAGTCCTAGTGGGGTGTCCTGCTCC | + |
Preference number: 3 (lower is better) Translates to: TSLGASAVPLLG*TCLSPSGVSCS Trigger: GGAGCAGGACACCCCACTAGGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CCA 72 bp | GTCCTAGTGGGGTGTCCTGCTCCCAGGATATTCACCTaGGGCCTCCTCCCTTGCAGGCTGAGCTTCCCTCAG | + |
Preference number: 3 (lower is better) Translates to: VLVGCPAPRIFT*GLLPCRLSFPQ Trigger: CTGAGGGAAGCTCAGCCTGCAAGGGAGGAGGCCCCAGGTGAATATCCTGGGAGCAGGACACCCCACTAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR GCA 72 bp | TTGGGATGCACGTGCCTCAGTCCTAGTGGGGTGTCCTaGTCCCAGGATATTCACCTGGGGCCTCCTCCCTTG | + |
Preference number: 3 (lower is better) Translates to: LGCTCLSPSGVS*SQDIHLGPPPL Trigger: CAAGGGAGGAGGCCCCAGGTGAATATCCTGGGAGCAGGACACCCCACTAGGACTGAGGCACGTGCATCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CCA 72 bp | GGCCAGAGGACCTTCTCCCTGCTTTGTGGCGGGCGATaGAGACCACAAGTTAGGCCTTCCTTCCCCACTCTG | + |
Preference number: 3 (lower is better) Translates to: GQRTFSLLCGGR*RPQVRPSFPTL Trigger: CAGAGTGGGGAAGGAAGGCCTAACTTGTGGTCTCCATCGCCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CCA 72 bp | TTCCTCAGGGCACGTTCCTGGCATAGCCGGCTGCCCTaGATGTCATGTGGCCAGAGGACCTTCTCCCTGCTT | + |
Preference number: 3 (lower is better) Translates to: FLRARSWHSRLP*MSCGQRTFSLL Trigger: AAGCAGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGCAGCCGGCTATGCCAGGAACGTGCCCTGAGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR GCA 72 bp | TGCCCTGGATGTCATGTGGCCAGAGGACCTTCTCCCTaGTTTGTGGCGGGCGATGGAGACCACAAGTTAGGC | + |
Preference number: 3 (lower is better) Translates to: CPGCHVARGPSP*FVAGDGDHKLG Trigger: GCCTAACTTGTGGTCTCCATCGCCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CCA 72 bp | GAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCACTaGACCCTACAGTCTGTCAGGGCAGTCAGGGTCTGT | + |
Preference number: 3 (lower is better) Translates to: EPREPGQVRNTH*TLQSVRAVRVC Trigger: ACAGACCCTGACTGCCCTGACAGACTGTAGGGTCCAGTGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR CAA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTCTGGGGCCTCCTCCCTaGCAGGCTGAGCTTCCCTCA | + |
Preference number: 3 (lower is better) Translates to: EGILTPQSLKPKAKLSQTLGPPP*QAELPS Trigger: TGAGGGAAGCTCAGCCTGCAAGGGAGGAGGCCCCAG...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR TCA 72 bp | GGGGGTAGCCTTGGTATGAGTGTGTCCAACGGAGAATaGCCCTGTTGCCAAAGGGCCTTCAGAAGGAATCCT | + |
Preference number: 3 (lower is better) Translates to: GGSLGMSVSNGE*PCCQRAFRRNP Trigger: AGGATTCCTTCTGAAGGCCCTTTGGCAACAGGGTCATTCTCCGTTGGACACACTCATACCAAGGCTACCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR CAA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTCGGAGAATGACCCTGTaGCCAAAGGGCCTTCAGAAG | + |
Preference number: 3 (lower is better) Translates to: LSKARKTSHMAMLSTSSPRRMTL*PKGLQK Trigger: CTTCTGAAGGCCCTTTGGCAACAGGGTCATTCTCCG...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR-3UTR CAA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTATTTTACAAATCTCATaGCAAATGGAGAAAGGGGAC | + |
Preference number: 3 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCILQIS*QMEKGD Trigger: GTCCCCTTTCTCCATTTGCAATGAGATTTGTAAAAT...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGACACTGGGTGGGCCCTaGCCCCCAGCAGTGCCCACG | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRTLGGP*PPAVPT Trigger: CGTGGGCACTGCTGGGGGCCAGGGCCCACCCAGTGT...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGACGAGCTGCGGTGTCTaGGGTGGGCTGTGCTCCCAG | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRTSCGV*GGLCSQ Trigger: CTGGGAGCACAGCCCACCGCAGACACCGCAGCTCGT...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCAGGCGGAGGACCCTCTaGGGTCAAGGGAGACTGAGG | + |
Preference number: 4 (lower is better) Translates to: DQSGCKCCPPLGMHVPQSRRRTL*GQGRLR Trigger: CCTCAGTCTCCCTTGACCCCAGAGGGTCCTCCGCCT...GGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | CTGCCCTGGATGTCATGTGGCCAGAGGACCTTCTCCCTGCTTTGTGGCGGGCGATGGCCCCGGAGGAACTaGCTGCAGTTGACACACTGG | + |
Preference number: 4 (lower is better) Translates to: LPWMSCGQRTFSLLCGGRWPRRN*LQLTHW Trigger: CCAGTGTGTCAACTGCAGTCAGTTCCTCCGGGGCCA...TCGCCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | CTCAGGGCACGTTCCTGGCATAGCCGGCTGCCCTGGATGTCATGTGGCCAGAGGCTCCACACATCACTCTaGTGGGTGAACCGGCGTCTG | + |
Preference number: 4 (lower is better) Translates to: LRARSWHSRLPWMSCGQRLHTSL*WVNRRL Trigger: CAGACGCCGGTTCACCCATCAGAGTGATGTGTGGAG...CCTCTGGCCACATGACATCCAGGGCAGCCGGCTATGCCAGGAACGTGCCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGCTGTGGAGTAGGGCCTaGTGCGGGTTCCGGAAGAGC | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRLWSRA*CGFRKS Trigger: GCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAG...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | CTGCCCTGGATGTCATGTGGCCAGAGGACCTTCTCCCTGCTTTGTGGCGGGCGAAGTGCCGAAGGCTCCTaGCCCAAGCACCTTCAGCTT | + |
Preference number: 4 (lower is better) Translates to: LPWMSCGQRTFSLLCGGRSAEGS*PKHLQL Trigger: AAGCTGAAGGTGCTTGGGTCAGGAGCCTTCGGCACT...TCGCCCGCCACAAAGCAGGGAGAAGGTCCTCTGGCCACATGACATCCAGGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCCCAATGCCATCCACTTaGTGGGCACCTTGCCCCCAT | + |
Preference number: 4 (lower is better) Translates to: DQSGCKCCPPLGMHVPQSPMPST*WAPCPH Trigger: ATGGGGGCAAGGTGCCCATCAAGTGGATGGCATTGG...GGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCCTGAGGCCGAACCTCTaGCTGGTTCACATACTCGGG | + |
Preference number: 4 (lower is better) Translates to: DQSGCKCCPPLGMHVPQSLRPNL*LVHILG Trigger: CCCGAGTATGTGAACCAGCCAGAGGTTCGGCCTCAG...GGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GAGCCAGGCCAGGTAAGGAATACCCACTGGACCCTACAGTCTGTCAGGGCAGTCCGTAGCCCCAGTGAGTaGATCCCCAGGCCTTGCAAC | + |
Preference number: 4 (lower is better) Translates to: EPGQVRNTHWTLQSVRAVRSPSE*IPRPCN Trigger: GTTGCAAGGCCTGGGGATTCACTCACTGGGGCTACG...GACTGCCCTGACAGACTGTAGGGTCCAGTGGGTATTCCTTACCTGGCCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GAGCCAGGCCAGGTAAGGAATACCCACTGGACCCTACAGTCTGTCAGGGCAGTCTGTCAAAGGCTGGGCTaGAGGCAGGAGAAGGGTGGG | + |
Preference number: 4 (lower is better) Translates to: EPGQVRNTHWTLQSVRAVCQRLG*RQEKGG Trigger: CCCACCCTTCTCCTGCCTTCAGCCCAGCCTTTGACA...GACTGCCCTGACAGACTGTAGGGTCCAGTGGGTATTCCTTACCTGGCCTGGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCCCTCACATACTCCCTaGGGAGCCCCTTCCATACTC | + |
Preference number: 4 (lower is better) Translates to: RPVWVQVLSPSWDARASVPSHTP*GAPSIL Trigger: GAGTATGGAAGGGGCTCCCCAGGGAGTATGTGAGGG...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGATGACCACAAAGCGCTaGGGGTCCCTTGCCATACGG | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRMTTKR*GSLAIR Trigger: CCGTATGGCAAGGGACCCCCAGCGCTTTGTGGTCAT...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCGGCTCTGCAGTCCTTTaGTTACCCCCACTGCCAGGT | + |
Preference number: 4 (lower is better) Translates to: RPVWVQVLSPSWDARASVGSAVL*LPPLPG Trigger: ACCTGGCAGTGGGGGTAACCAAAGGACTGCAGAGCC...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGTTTAGGATCCGCATCTaGGCCTGGTTGGGCACAGCT | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRFRIRI*AWLGTA Trigger: AGCTGTGCCCAACCAGGCTCAGATGCGGATCCTAAA...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCTCGGAGGTGCTCCATaGCCAGACCATAGCATACTC | + |
Preference number: 4 (lower is better) Translates to: RPVWVQVLSPSWDARASVLGGAP*PDHSIL Trigger: GAGTATGCTATGGTCTGGGCATGGAGCACCTCCGAG...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CTCAGGGCACGTTCCTGGCATAGCCGGCTGCCCTGGATGTCATGTGGCCAGAGGGCTCTCCGGCAAAAATaGCAGGCTCCCAAAGATCTT | + |
Preference number: 4 (lower is better) Translates to: LRARSWHSRLPWMSCGQRALRQK*QAPKDL Trigger: AAGATCTTTGGGAGCCTGGCATTTTTGCCGGAGAGC...CCTCTGGCCACATGACATCCAGGGCAGCCGGCTATGCCAGGAACGTGCCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCTGGCATGGCAGACAGTaGTTGCCCCTCACATACTCC | + |
Preference number: 4 (lower is better) Translates to: RPVWVQVLSPSWDARASVWHGRQ*LPLTYS Trigger: GGAGTATGTGAGGGGCAAGCACTGTCTGCCATGCCA...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCGGGGCAGAGGTAATGTaGGATCCTCACTGTACCGCT | + |
Preference number: 4 (lower is better) Translates to: RPVWVQVLSPSWDARASVGAEVM*DPHCTA Trigger: AGCGGTACAGTGAGGATCCCACATTACCTCTGCCCC...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GAGCCAGGCCAGGTAAGGAATACCCACTGGACCCTACAGTCTGTCAGGGCAGTCTTGTCCTCAAAGAGCTaGGTCCCTCTCACGATGCGC | + |
Preference number: 4 (lower is better) Translates to: EPGQVRNTHWTLQSVRAVLSSKS*VPLTMR Trigger: GCGCATCGTGAGAGGGACTCAGCTCTTTGAGGACAA...GACTGCCCTGACAGACTGTAGGGTCCAGTGGGTATTCCTTACCTGGCCTGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCTCACAGATACCACTATaGTTGAAGTGGAGGCAGGCC | + |
Preference number: 4 (lower is better) Translates to: DQSGCKCCPPLGMHVPQSSQIPL*LKWRQA Trigger: GGCCTGCCTCCACTTCAATCATAGTGGTATCTGTGA...GGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | CTCAGGGCACGTTCCTGGCATAGCCGGCTGCCCTGGATGTCATGTGGCCAGAGGTGTATAGGTAACCTGTaGTCTCCTCCAGGGTTTCGA | + |
Preference number: 4 (lower is better) Translates to: LRARSWHSRLPWMSCGQRCIGNL*SPPGFR Trigger: TCGAAACCCTGGAGGAGATCACAGGTTACCTATACA...CCTCTGGCCACATGACATCCAGGGCAGCCGGCTATGCCAGGAACGTGCCCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | CACTCAGGATTGAAGCATCGAGCGAGGTTCCTCAGGGCACGTTCCTGGCATAGCGTGCAGATTGGAGGCTaGGGTAGGCGTTCTCCCTTC | + |
Preference number: 4 (lower is better) Translates to: HSGLKHRARFLRARSWHSVQIGG*GRRSPF Trigger: GAAGGGAGAACGCCTACCTCAGCCTCCAATCTGCAC...GCTATGCCAGGAACGTGCCCTGAGGAACCTCGCTCGATGCTTCAATCCTGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCATCATCCTCCAGCAGTaGACGGTAGAAGGTGCTGTC | + |
Preference number: 4 (lower is better) Translates to: RPVWVQVLSPSWDARASVIILQQ*TVEGAV Trigger: GACAGCACCTTCTACCGTTCACTGCTGGAGGATGAT...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCAGGAGAAGGGTGGGGCTaGGAGGCAGTGCCTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: GPGPLSDIGWGPVILQISGEGWG*EAVPAL Trigger: CAGAGCAGGCACTGCCTCTCAGCCCCACCCTTCTCC...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGAGGACCCTGCTCCGATaGGTTCTGGTCCCAGTAATA | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRRTLLR*VLVPVI Trigger: TATTACTGGGACCAGAACTCATCGGAGCAGGGTCCT...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAGCTTCCCTCAGTCTTCAGAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCAGCTGGCTCTCTGCTCTaGTGGGCAGCCTCGTTCGTC | + |
Preference number: 4 (lower is better) Translates to: ELPSVFRTKRARPGKEYPAGSLL*WAASFV Trigger: GACGAACGAGGCTGCCCAGCAGAGCAGAGAGCCAGC...TGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTCTGAAGACTGAGGGAAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAGCTTCCCTCAGTCTTCAGAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCAACTGGGCTGGCTCTCTaGTCTGCTGGGCAGCCTCGT | + |
Preference number: 4 (lower is better) Translates to: ELPSVFRTKRARPGKEYPTGLAL*SAGQPR Trigger: ACGAGGCTGCCCAGCAGAGCAGAGAGCCAGCCCAGT...TGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTCTGAAGACTGAGGGAAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | CAAAGGGCCTTCAGAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAATTCTGGGGTTCTGCCTaGGGCGGCGGTGGTGACGTT | + |
Preference number: 4 (lower is better) Translates to: QRAFRRNPNSPVPQAQSQFWGSA*GGGGDV Trigger: AACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAA...TTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTCTGAAGGCCCTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGAGGTCCACACATGAGTaGGTGCAGTTGATGGGGCAT | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRRSTHE*VQLMGH Trigger: ATGCCCCATCAACTGCACCCACTCATGTGTGGACCT...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CAA 72 bp | TCCAGGAGGAGCTGTGTGTCAGATGAGCAATACGGTTaGACCCGGCCCGGGACCACTCTCAGACATAGGCTG | + |
Preference number: 4 (lower is better) Translates to: SRRSCVSDEQYG*TRPGTTLRHRL Trigger: CAGCCTATGTCTGAGAGTGGTCCCGGGCCGGGTCAAACCGTATTGCTCATCTGACACACAGCTCCTCCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAGCTTCCCTCAGTCTTCAGAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCAGCCAGGCAGTCAGAATaGTTGGGACCCGTGCAGCCT | + |
Preference number: 4 (lower is better) Translates to: ELPSVFRTKRARPGKEYPARQSE*LGPVQP Trigger: AGGCTGCACGGGTCCCAAGCATTCTGACTGCCTGGC...TGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTCTGAAGACTGAGGGAAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAGCTTCCCTCAGTCTTCAGAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCAGGGGACAGACCAGAGTaGAGGATCCCACTTCCGTGG | + |
Preference number: 4 (lower is better) Translates to: ELPSVFRTKRARPGKEYPGDRPE*RIPLPW Trigger: CCACGGAAGTGGGATCCTGCACTCTGGTCTGTCCCC...TGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTCTGAAGACTGAGGGAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGCCTGGCCCCCAGCAGTaGCCACGGGCACACAGTGAG | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWPGPQQ*PRAHSE Trigger: CTCACTGTGTGCCCGTGGGCACTGCTGGGGGCCAGG...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAGCTTCCCTCAGTCTTCAGAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCAACACTCGGGGTGGCATaGCAGACAGTGCTTGCCCCT | + |
Preference number: 4 (lower is better) Translates to: ELPSVFRTKRARPGKEYPTLGVA*QTVLAP Trigger: AGGGGCAAGCACTGTCTGCCATGCCACCCCGAGTGT...TGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTCTGAAGACTGAGGGAAGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGGCAGCAGCCTACGCATaGTATACTTCCGGATCTTCT | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRAAAYA*YTSGSS Trigger: AGAAGATCCGGAAGTATACCATGCGTAGGCTGCTGC...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | TGCCAAAGGGCCTTCAGAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCATGAGGGCCGGGCAGTaGAGCTCACAGATACCACTA | + |
Preference number: 4 (lower is better) Translates to: CQRAFRRNPNSPVPQAQSMRAGQ*SSQIPL Trigger: TAGTGGTATCTGTGAGCTGCACTGCCCGGCCCTCAT...GCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTCTGAAGGCCCTTTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CAAAGGGCCTTCAGAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAGTGAACGGTAGAAGGTaGTGTCCATGGGGCTGGAGG | + |
Preference number: 4 (lower is better) Translates to: QRAFRRNPNSPVPQAQSQVNGRR*CPWGWR Trigger: CCTCCAGCCCCATGGACAGCACCTTCTACCGTTCAC...TTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTCTGAAGGCCCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCACGAAGCATGTCCAGGTaGGTCTCAGGACTGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: GPGPLSDIGWGPVILQISRSMSR*VSGLAG Trigger: CCCTGCCAGTCCTGAGACCCACCTGGACATGCTTCG...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGCACCAGCAGGTCGGATaGGAGGCGGAGGACCCTCTG | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWHQQVG*EAEDPL Trigger: CAGAGGGTCCTCCGCCTCCCATCCGACCTGCTGGTG...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GAGCCAGGCCAGGTAAGGAATACCCACTGGACCCTACAGTCTGTCAGGGCAGTCCATACGGGAGAATTCTaGTACCAACTCCCGGAATCT | + |
Preference number: 4 (lower is better) Translates to: EPGQVRNTHWTLQSVRAVHTGEF*YQLPES Trigger: AGATTCCGGGAGTTGGTATCAGAATTCTCCCGTATG...GACTGCCCTGACAGACTGTAGGGTCCAGTGGGTATTCCTTACCTGGCCTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCAAATGCTTGGGACCCGTaGAGCCTGCAGCACACTGCT | + |
Preference number: 4 (lower is better) Translates to: GPGPLSDIGWGPVILQISNAWDP*SLQHTA Trigger: AGCAGTGTGCTGCAGGCTGCACGGGTCCCAAGCATT...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAGCTTCCCTCAGTCTTCAGAACCAAGAGAGCCAGGCCAGGTAAGGAATACCCAGCGCAACCTCTGCAGTaGGACGTGTTTCACTCGGTT | + |
Preference number: 4 (lower is better) Translates to: ELPSVFRTKRARPGKEYPAQPLQ*DVFHSV Trigger: AACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGC...TGGGTATTCCTTACCTGGCCTGGCTCTCTTGGTTCTGAAGACTGAGGGAAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AGGGTCTGTAATCCTCTGGGGCTGAACAGTGTGCTGTCTCTTCCGGCCAGGCGGTTGCCCCCATCTGCATaGTATTCAGTCTCATCAATG | + |
Preference number: 4 (lower is better) Translates to: RVCNPLGLNSVLSLPARRLPPSA*YSVSSM Trigger: CATTGATGAGACTGAATACCATGCAGATGGGGGCAA...CCGCCTGGCCGGAAGAGACAGCACACTGTTCAGCCCCAGAGGATTACAGACCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGTCCTGCAGGAATaGGAGGCTGGCATTGGCGGG | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWDVLQE*EAGIGG Trigger: CCCGCCAATGCCAGCCTCTCATTCCTGCAGGACATC...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTGGCAGTCAGAATGCTTaGGACCCGTGCAGCCTGCAG | + |
Preference number: 4 (lower is better) Translates to: LSKARKTSHMAMLSTSSPGSQNA*DPCSLQ Trigger: CTGCAGGCTGCACGGGTCCCAAGCATTCTGACTGCC...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCAGCAGTTGATGGGGCATaGCTGACATATGCCCTCCTC | + |
Preference number: 4 (lower is better) Translates to: GPGPLSDIGWGPVILQISAVDGA*LTYALL Trigger: GAGGAGGGCATATGTCAGCCATGCCCCATCAACTGC...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGGGCACAGCTCCACTaGGCGTCAGCGGCTCCACCA | + |
Preference number: 4 (lower is better) Translates to: NCLKLLEDLYTLTPGGAVWAQLH*ASAAPP Trigger: TGGTGGAGCCGCTGACGCCCAGTGGAGCTGTGCCCA...CACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTGAGCCAGTGGAGATCTaGGGGGCTCTTCTTCCGAGG | + |
Preference number: 4 (lower is better) Translates to: EGILTPQSLKPKAKLSQTEPVEI*GALLPR Trigger: CCTCGGAAGAAGAGCCCCCCAGATCTCCACTGGCTC...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCACTCGGTTGTGAGCGATaGGCATGTATCCCTGGACTT | + |
Preference number: 4 (lower is better) Translates to: GPGPLSDIGWGPVILQISLGCER*ACIPGL Trigger: AAGTCCAGGGATACATGCTCATCGCTCACAACCGAG...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCAAGATACCACTATGATTaGAGTGGAGGCAGGCCAGGC | + |
Preference number: 4 (lower is better) Translates to: GPGPLSDIGWGPVILQISRYHYD*SGGRPG Trigger: GCCTGGCCTGCCTCCACTTCAATCATAGTGGTATCT...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGTTCCGTCCTCAGCTGTaGCCTCTTGGTTGTTCGGGG | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWFRPQL*PLGCSG Trigger: CCCCGAACAACCAAGAGGTCACAGCTGAGGACGGAA...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTGGAACTGACTGCAGTTaGCACACTGGGTGGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFGTDCS*HTGWAL Trigger: CAGGGCCCACCCAGTGTGTCAACTGCAGTCAGTTCC...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGAGTCCTCGTTCTGGATaGCCACAAAGCGCTGGGGGT | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWSPRSG*PQSAGG Trigger: ACCCCCAGCGCTTTGTGGTCATCCAGAACGAGGACT...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTGAGTCCCTCTCACGATaGGCAACCTCTGCAGTGGGA | + |
Preference number: 4 (lower is better) Translates to: LSKARKTSHMAMLSTSSPESLSR*ATSAVG Trigger: TCCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTC...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGTGAGACTTCGAAGCTaGAGCTCCCGCAGCCCTTCT | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWVRLRS*SSRSPS Trigger: AGAAGGGCTGCGGGAGCTGCAGCTTCGAAGTCTCAC...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CAAAGGGCCTTCAGAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAATGTAGACGTCGATGGTaGAGATTGGAGGCTGAGGTA | + |
Preference number: 4 (lower is better) Translates to: QRAFRRNPNSPVPQAQSQCRRRW*RLEAEV Trigger: TACCTCAGCCTCCAATCTGCACCATCGACGTCTACA...TTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTCTGAAGGCCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTGCAGGAATGAGAGGCTaGCATTGGCGGGCAGGTAGG | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFAGMRG*HWRAGR Trigger: CCTACCTGCCCGCCAATGCCAGCCTCTCATTCCTGC...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGCACTTGGAGATGCTCTaGCTTCAGTGGGGCAACGCC | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWHLEML*LQWGNA Trigger: GGCGTTGCCCCACTGAAGCCAGAGCATCTCCAAGTG...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCAGGGCTGAGGTCATGTaGAGAGAGGCTCTGCAGTCC | + |
Preference number: 4 (lower is better) Translates to: EQNKLCTKTSLGASAVPLRAEVM*REALQS Trigger: GGACTGCAGAGCCTCTCTCCACATGACCTCAGCCCT...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTCGTGGTTGGGACTCTTaGCTAGCACGTTTCGGGCAG | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFRGWDS*LARFGQ Trigger: CTGCCCGAAACGTGCTAGTCAAGAGTCCCAACCACG...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTCAGCCTGCAGCACACTaGTCATGGCAACAGTCAGTG | + |
Preference number: 4 (lower is better) Translates to: EGILTPQSLKPKAKLSQTQPAAH*SWQQSV Trigger: CACTGACTGTTGCCATGAGCAGTGTGCTGCAGGCTG...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTCTCCAGCACAGGGCTTaGTGCATTTCTCACACCGCT | + |
Preference number: 4 (lower is better) Translates to: EGILTPQSLKPKAKLSQTLQHRA*CISHTA Trigger: AGCGGTGTGAGAAATGCAGCAAGCCCTGTGCTGGAG...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGATGGCAGACAGTGCTTaGCCCTCACATACTCCCTGG | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWMADSA*PSHTPW Trigger: CCAGGGAGTATGTGAGGGGCAAGCACTGTCTGCCAT...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTAGCTGTGTCACCAGCTaGACTGTGGATGTCAGGCAG | + |
Preference number: 4 (lower is better) Translates to: LSKARKTSHMAMLSTSSPSCVTS*TVDVRQ Trigger: CTGCCTGACATCCACAGTGCAGCTGGTGACACAGCT...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTGAGGTTGTCAAAGGCTaGGCTGAAGGCAGGAGAAGG | + |
Preference number: 4 (lower is better) Translates to: EGILTPQSLKPKAKLSQTEVVKG*AEGRRR Trigger: CCTTCTCCTGCCTTCAGCCCAGCCTTTGACAACCTC...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGCAGGGTTCTCTGCAGTaGGGGTCCCTTCAAAGGTAC | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWQGSLQ*GSLQRY Trigger: GTACCTTTGAAGGGACCCCCACTGCAGAGAACCCTG...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTACTTCCTGGATGTCCTaGAGGAATGAGAGGCTGGCA | + |
Preference number: 4 (lower is better) Translates to: LSKARKTSHMAMLSTSSPTSWMS*RNERLA Trigger: TGCCAGCCTCTCATTCCTGCAGGACATCCAGGAAGT...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCCACGTTCTCCCCATCTaGGATCCAGATGCCCTTGTA | + |
Preference number: 4 (lower is better) Translates to: VSNFWKISTHSLQEELCVHVLPI*DPDALV Trigger: TACAAGGGCATCTGGATCCCAGATGGGGAGAACGTG...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTGAGGCGGGACACATATaGAGAACCCACACCAGCCAT | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFEAGHI*RTHTSH Trigger: ATGGCTGGTGTGGGTTCTCCATATGTGTCCCGCCTC...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCAGGGATCTCCCGAGCTaGGATCCCATCGTAAGGTTT | + |
Preference number: 4 (lower is better) Translates to: VSNFWKISTHSLQEELCVRDLPS*DPIVRF Trigger: AAACCTTACGATGGGATCCCAGCTCGGGAGATCCCT...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTCCTAAGTCCTCGTTCTaGATGACCACAAAGCGCTGG | + |
Preference number: 4 (lower is better) Translates to: EGILTPQSLKPKAKLSQTPKSSF*MTTKRW Trigger: CCAGCGCTTTGTGGTCATCCAGAACGAGGACTTAGG...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCAGGCAGTGCCTGCTCTaGGTGCTAAGTATTCAGGGT | + |
Preference number: 4 (lower is better) Translates to: EQNKLCTKTSLGASAVPLRQCLL*VLSIQG Trigger: ACCCTGAATACTTAGCACCCAGAGCAGGCACTGCCT...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCCCTTCAAGATCTCTGTaGGACTTCGAAGCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: EQNKLCTKTSLGASAVPLPSRSL*DFEAAA Trigger: AGCTGCAGCTTCGAAGTCTCACAGAGATCTTGAAGG...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTCTCTCACCCCAACAGTaGTTGTCTTTGCAGGTTGGG | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFLSPQQ*LSLQVG Trigger: CCCAACCTGCAAAGACAATCACTGTTGGGGTGAGAG...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTAGCGACCCTCAGGGTTaGGCATGGACTCGAAGGTGT | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCSDPQG*AWTRRC Trigger: ACACCTTCGAGTCCATGCTCAACCCTGAGGGTCGCT...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGCAGCACAGGGCTTGCTaGATTTCTCACACCGCTGTG | + |
Preference number: 4 (lower is better) Translates to: NCLKLLEDLYTLTPGGAVQHRAC*ISHTAV Trigger: CACAGCGGTGTGAGAAATGCAGCAAGCCCTGTGCTG...CACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTTTTGGTTACCCCCACTaGCAGGTCACCATCAAACAC | + |
Preference number: 4 (lower is better) Translates to: LSKARKTSHMAMLSTSSPFGYPH*QVTIKH Trigger: GTGTTTGATGGTGACCTGGCAGTGGGGGTAACCAAA...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGCAGCACACTGCTCATaGCAACAGTCAGTGGGCAGC | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCAAHCS*QQSVGS Trigger: GCTGCCCACTGACTGTTGCCATGAGCAGTGTGCTGC...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCGGTAGCTCATCCCCTTaGCAATCTGAACACACCAGT | + |
Preference number: 4 (lower is better) Translates to: EQNKLCTKTSLGASAVPLGSSSP*QSEHTS Trigger: ACTGGTGTGTTCAGATTGCCAAGGGGATGAGCTACC...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTTCATGTAGACGTCGATaGTGCAGATTGGAGGCTGAG | + |
Preference number: 4 (lower is better) Translates to: LSKARKTSHMAMLSTSSPSCRRR*CRLEAE Trigger: CTCAGCCTCCAATCTGCACCATCGACGTCTACATGA...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTTTGATGGGGCATGGCTaGCATATGCCCTCCTCATCC | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCLMGHG*HMPSSS Trigger: GGATGAGGAGGGCATATGTCAGCCATGCCCCATCAA...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR TCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTTTTCCCTCAACACCTTaGTGGCCACGGGGATTTTCA | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFFPSTP*WPRGFS Trigger: TGAAAATCCCCGTGGCCATCAAGGTGTTGAGGGAAA...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTCCCAAAGATCTTCTTaGAGCCAGCAAACTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: EQNKLCTKTSLGASAVPLSQRSS*SQQTPG Trigger: TCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGA...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGCATCTGGGATCCAGATaGCCTTGTAGACAGTGCCGA | + |
Preference number: 4 (lower is better) Translates to: NCLKLLEDLYTLTPGGAVHLGSR*PCRQCR Trigger: TCGGCACTGTCTACAAGGGCATCTGGATCCCAGATG...CACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTAATGTCCAGCAGCCGTaGCAGCCCGAAGTCGGTAAT | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCNVQQP*QPEVGN Trigger: ATTACCGACTTCGGGCTGGCACGGCTGCTGGACATT...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTAGTTGTAGGGGCAGGTaGTCACACAGCTGGCACCAA | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCSCRGR*SHSWHQ Trigger: TTGGTGCCAGCTGTGTGACCACCTGCCCCTACAACT...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGCAGCCAGCAAACTCCTaGATATTGTCACTGGTGATG | + |
Preference number: 4 (lower is better) Translates to: KINSVQRPVWVQVLSPSWQPANS*ILSLVM Trigger: CATCACCAGTGACAATATCCAGGAGTTTGCTGGCTG...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCAGGGTTTCGAACACTTaGAGATGCTCTGGCTTCAGT | + |
Preference number: 4 (lower is better) Translates to: VSNFWKISTHSLQEELCVRVSNT*RCSGFS Trigger: ACTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCT...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | GGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTTAAGACACTGAGGTCTTaGAAGCTCTCTGGCCATGCT | + |
Preference number: 4 (lower is better) Translates to: GILTPQSLKPKAKLSQTFKTLRS*KLSGHA Trigger: AGCATGGCCAGAGAGCTTCCAAGACCTCAGTGTCTT...AAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTTCGAACACTTGGAGATaGTCTGGCTTCAGTGGGGCA | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCSNTWR*SGFSGA Trigger: TGCCCCACTGAAGCCAGAGCATCTCCAAGTGTTCGA...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTACTCAGGGTTCTCTaGAGTGGGGGTCCCTTCAAA | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCVLRVL*SGGPFK Trigger: TTTGAAGGGACCCCCACTGCAGAGAACCCTGAGTAC...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTATCCCTGGACTTCCTaGATGTCCTGCAGGAATGAG | + |
Preference number: 4 (lower is better) Translates to: NCLKLLEDLYTLTPGGAVYPWTS*MSCRNE Trigger: CTCATTCCTGCAGGACATCCAGGAAGTCCAGGGATA...CACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CAA 72 bp | AGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTTTaGGAAGATCTCTACACACTCACTCCAGGAGGAGCT | + |
Preference number: 4 (lower is better) Translates to: SPSSPKPNCLKL*EDLYTLTPGGA Trigger: AGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR GCA 90 bp | AAATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTCACCTTGCCCCCATCTaGATGGTATTCAGTCTCATC | + |
Preference number: 4 (lower is better) Translates to: KLSQTFGRSLHTHSRRSCHLAPI*MVFSLI Trigger: GATGAGACTGAATACCATGCAGATGGGGGCAAGGTG...ACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CCA 90 bp | AATTGTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTCGGTAATCTTGACGTaGTTGGGACTCTTGACTAGC | + |
Preference number: 4 (lower is better) Translates to: NCLKLLEDLYTLTPGGAVSVILT*LGLLTS Trigger: GCTAGTCAAGAGTCCCAACCACGTCAAGATTACCGA...CACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
3UTR CAA 72 bp | ATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATaGTCTCAAACTTTTGGAAGATCTCTACACACTCAC | + |
Preference number: 4 (lower is better) Translates to: ILTPQSLKPKAK*SQTFGRSLHTH Trigger: GTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | CTTCCGAGGGCTCCAGGCCCAGTGTCAGCTCACCACCGCCACTCCTaGCCGACGAGCTGCGGTGTCTGCGGTGGGCTGTGCTCCCAGTAC | + |
Preference number: 5 (lower is better) Translates to: LPRAPGPVSAHHRHS*PTSCGVCGGLCSQY Trigger: GTACTGGGAGCACAGCCCACCGCAGACACCGCAGCTCGTCGGCCAGGAGTGGCGGTGGTGAGCTGACACTGGGCCTGGAGCCCTCGGAAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | GCAGGTCGGATGGGAGGCGGAGGACCCTCTGGGGTCAAGGGAGACTaGGGCCGAACCTCTGGCTGGTTCACATACTCGGGCTGGGGGCTG | + |
Preference number: 5 (lower is better) Translates to: AGRMGGGGPSGVKGD*GRTSGWFTYSGWGL Trigger: CAGCCCCCAGCCCGAGTATGTGAACCAGCCAGAGGTTCGGCCTCAGTCTCCCTTGACCCCAGAGGGTCCTCCGCCTCCCATCCGACCTGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | GCAGCTCCCGCAGCCCTTCTGGGGTTCTGCCTGGGGCGGCGGTGGTaGCGTTGTCCAAAGGGTCTCGGTTGTCTAGCACAGCCAGGGCAT | + |
Preference number: 5 (lower is better) Translates to: AAPAALLGFCLGRRW*RCPKGLGCLAQPGH Trigger: ATGCCCTGGCTGTGCTAGACAACCGAGACCCTTTGGACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGGGCTGCGGGAGCTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | AGCTCACCACCGCCACTCCTGGCCGACGAGCTGCGGTGTCTGCGGTaGGCTGTGCTCCCAGTACCTAGGGCAGGGTCTGGGGAGAAGAAT | + |
Preference number: 5 (lower is better) Translates to: SSPPPLLADELRCLR*AVLPVPRAGSGEKN Trigger: ATTCTTCTCCCCAGACCCTGCCCTAGGTACTGGGAGCACAGCCCACCGCAGACACCGCAGCTCGTCGGCCAGGAGTGGCGGTGGTGAGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 90 bp | GTGGAGGCAGGCCAGGCAGTCAGAATGCTTGGGACCCGTGCAGCCTaGAGCACACTGCTCATGGCAACAGTCAGTGGGCAGCCGGCCCTT | + |
Preference number: 5 (lower is better) Translates to: VEAGQAVRMLGTRAA*STLLMATVSGQPAL Trigger: AAGGGCCGGCTGCCCACTGACTGTTGCCATGAGCAGTGTGCTGCAGGCTGCACGGGTCCCAAGCATTCTGACTGCCTGGCCTGCCTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | CAAACACATCGGAGCCAGCCCCTTCGGAGGGAGCCAGTGGAGATCTaGGGGGCTCTTCTTCCGAGGGCTCCAGGCCCAGTGTCAGCTCAC | + |
Preference number: 5 (lower is better) Translates to: QTHRSQPLRREPVEI*GALLPRAPGPVSAH Trigger: GTGAGCTGACACTGGGCCTGGAGCCCTCGGAAGAAGAGCCCCCCAGATCTCCACTGGCTCCCTCCGAAGGGGCTGGCTCCGATGTGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | TCTCCTTTAGGATCCGCATCTGAGCCTGGTTGGGCACAGCTCCACTaGGCGTCAGCGGCTCCACCAGCTCGGTCTCCTGCAGCAGCCTAC | + |
Preference number: 5 (lower is better) Translates to: SPLGSASEPGWAQLH*ASAAPPARSPAAAY Trigger: GTAGGCTGCTGCAGGAGACCGAGCTGGTGGAGCCGCTGACGCCCAGTGGAGCTGTGCCCAACCAGGCTCAGATGCGGATCCTAAAGGAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | CAAGATCTCTGTGAGACTTCGAAGCTGCAGCTCCCGCAGCCCTTCTaGGGTTCTGCCTGGGGCGGCGGTGGTGACGTTGTCCAAAGGGTC | + |
Preference number: 5 (lower is better) Translates to: QDLCETSKLQLPQPF*GSAWGGGGDVVQRV Trigger: GACCCTTTGGACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGGGCTGCGGGAGCTGCAGCTTCGAAGTCTCACAGAGATCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | ACCAAGCCCTCAAGACCACATGCCTCTTCTGGCCGGTTCCCACTGTaGAGTAGGGCCTGGTGCGGGTTCCGGAAGAGCTGGTCCCAAGGT | + |
Preference number: 5 (lower is better) Translates to: TKPSRPHASSGRFPL*SRAWCGFRKSWSQG Trigger: ACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCGGCCAGAAGAGGCATGTGGTCTTGAGGGCTTGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | GCTTCCTTAGCTCTGTCTCCTTTAGGATCCGCATCTGAGCCTGGTTaGGCACAGCTCCACTGGGCGTCAGCGGCTCCACCAGCTCGGTCT | + |
Preference number: 5 (lower is better) Translates to: ASLALSPLGSASEPG*AQLHWASAAPPARS Trigger: AGACCGAGCTGGTGGAGCCGCTGACGCCCAGTGGAGCTGTGCCCAACCAGGCTCAGATGCGGATCCTAAAGGAGACAGAGCTAAGGAAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | CTCAGGGCACGTTCCTGGCATAGCCGGCTGCCCTGGATGTCATGTGGCCAGAGGGATTGTCTTTGCAGGTaGGGGCACAAGGTGGACAGG | + |
Preference number: 5 (lower is better) Translates to: LRARSWHSRLPWMSCGQRDCLCR*GHKVDR Trigger: CCTGTCCACCTTGTGCCCCAACCTGCAAAGACAATC...CCTCTGGCCACATGACATCCAGGGCAGCCGGCTATGCCAGGAACGTGCCCTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | CTGGGCAGCCTCGTTCGTCCAGGTCCACACATGAGTGGGTGCAGTTaGTGGGGCATGGCTGACATATGCCCTCCTCATCCGGGTACTTCC | + |
Preference number: 5 (lower is better) Translates to: LGSLVRPGPHMSGCS*WGMADICPPHPGTS Trigger: GGAAGTACCCGGATGAGGAGGGCATATGTCAGCCATGCCCCATCAACTGCACCCACTCATGTGTGGACCTGGACGAACGAGGCTGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | AGCCCTGGTAGAGGTGGCGAAGCATGTCCAGGTGGGTCTCAGGACTaGCAGGGAGTCGCAACTTCATGTCGGTACCGGTACACACTTGGG | + |
Preference number: 5 (lower is better) Translates to: SPGRGGEACPGGSQD*QGVATSCRYRYTLG Trigger: CCCAAGTGTGTACCGGTACCGACATGAAGTTGCGACTCCCTGCCAGTCCTGAGACCCACCTGGACATGCTTCGCCACCTCTACCAGGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | GGGCTGGAGGGGCCTAAGTCCTCGTTCTGGATGACCACAAAGCGCTaGGGGTCCCTTGCCATACGGGAGAATTCTGATACCAACTCCCGG | + |
Preference number: 5 (lower is better) Translates to: GLEGPKSSFWMTTKR*GSLAIRENSDTNSR Trigger: CCGGGAGTTGGTATCAGAATTCTCCCGTATGGCAAGGGACCCCCAGCGCTTTGTGGTCATCCAGAACGAGGACTTAGGCCCCTCCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | AGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCACTCCAGCACAGGGCTaGCTGCATTTCTCACACCGC | + |
Preference number: 5 (lower is better) Translates to: RPVWVQVLSPSWDARASVTPAQG*LHFSHR Trigger: GCGGTGTGAGAAATGCAGCAAGCCCTGTGCTGGAGT...GACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 90 bp | CCACATGCCTCTTCTGGCCGGTTCCCACTGTGGAGTAGGGCCTGGTaGGGGTTCCGGAAGAGCTGGTCCCAAGGTACAGTGTTTACAAAG | + |
Preference number: 5 (lower is better) Translates to: PHASSGRFPLWSRAW*GFRKSWSQGTVFTK Trigger: CTTTGTAAACACTGTACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCGGCCAGAAGAGGCATGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 90 bp | ACGCCCACCACAGTTGCAATGATGAATGTCACTGGGCTGGCTCTCTaGTCTGCTGGGCAGCCTCGTTCGTCCAGGTCCACACATGAGTGG | + |
Preference number: 5 (lower is better) Translates to: TPTTVAMMNVTGLAL*SAGQPRSSRSTHEW Trigger: CCACTCATGTGTGGACCTGGACGAACGAGGCTGCCCAGCAGAGCAGAGAGCCAGCCCAGTGACATTCATCATTGCAACTGTGGTGGGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | GATCTCCTCCAGGGTTTCGAACACTTGGAGATGCTCTGGCTTCAGTaGGGCAACGCCGGAGGAGGGGTTCCCATCAAAGCTCTCCGGCAA | + |
Preference number: 5 (lower is better) Translates to: DLLQGFEHLEMLWLQ*GNAGGGVPIKALRQ Trigger: TTGCCGGAGAGCTTTGATGGGAACCCCTCCTCCGGCGTTGCCCCACTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCTGGAGGAGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | CGGTTCCCACTGTGGAGTAGGGCCTGGTGCGGGTTCCGGAAGAGCTaGTCCCAAGGTACAGTGTTTACAAAGCAGAGATGGGTGTTGCGG | + |
Preference number: 5 (lower is better) Translates to: RFPLWSRAWCGFRKS*SQGTVFTKQRWVLR Trigger: CCGCAACACCCATCTCTGCTTTGTAAACACTGTACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | AGACCACATGCCTCTTCTGGCCGGTTCCCACTGTGGAGTAGGGCCTaGTGCGGGTTCCGGAAGAGCTGGTCCCAAGGTACAGTGTTTACA | + |
Preference number: 5 (lower is better) Translates to: RPHASSGRFPLWSRA*CGFRKSWSQGTVFT Trigger: TGTAAACACTGTACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCGGCCAGAAGAGGCATGTGGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | CAGGAACAACAGGACGCCCACCACAGTTGCAATGATGAATGTCACTaGGCTGGCTCTCTGCTCTGCTGGGCAGCCTCGTTCGTCCAGGTC | + |
Preference number: 5 (lower is better) Translates to: QEQQDAHHSCNDECH*AGSLLCWAASFVQV Trigger: GACCTGGACGAACGAGGCTGCCCAGCAGAGCAGAGAGCCAGCCCAGTGACATTCATCATTGCAACTGTGGTGGGCGTCCTGTTGTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | CTGCATTTCTCACACCGCTGTGTTCCGTCCTCAGCTGTGACCTCTTaGTTGTTCGGGGGACAGACCAGAGTGCAGGATCCCACTTCCGTG | + |
Preference number: 5 (lower is better) Translates to: LHFSHRCVPSSAVTS*LFGGQTRVQDPTSV Trigger: CACGGAAGTGGGATCCTGCACTCTGGTCTGTCCCCCGAACAACCAAGAGGTCACAGCTGAGGACGGAACACAGCGGTGTGAGAAATGCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGGATGCACGTGCCTCAGTCCGTAATCTTGACGTGGTaGGGACTCTTGACTAGCACG | + |
Preference number: 5 (lower is better) Translates to: DQSGCKCCPPLGMHVPQSVILTW*GLLTST Trigger: CGTGCTAGTCAAGAGTCCCAACCACGTCAAGATTAC...GGACTGAGGCACGTGCATCCCAAGAGGGGGACAGCACTTGCACCCAGACTGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | CTCACGATGCGCAACCTCTGCAGTGGGACGTGTTTCACTCGGTTGTaGGCGATGAGCATGTATCCCTGGACTTCCTGGATGTCCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: LTMRNLCSGTCFTRL*AMSMYPWTSWMSCR Trigger: CCTGCAGGACATCCAGGAAGTCCAGGGATACATGCTCATCGCTCACAACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGCATCGTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | CCCAAGGTACAGTGTTTACAAAGCAGAGATGGGTGTTGCGGTGAATaGGAGCCAATCCACTGCCCAGCTCCCGCAGTGAGCGTAGCCCCA | + |
Preference number: 5 (lower is better) Translates to: PKVQCLQSRDGCCGE*EPIHCPAPAVSVAP Trigger: TGGGGCTACGCTCACTGCGGGAGCTGGGCAGTGGATTGGCTCTCATTCACCGCAACACCCATCTCTGCTTTGTAAACACTGTACCTTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 90 bp | CAGCCAGGGCATACTTGTCCTCAAAGAGCTGAGTCCCTCTCACGATaGGCAACCTCTGCAGTGGGACGTGTTTCACTCGGTTGTGAGCGA | + |
Preference number: 5 (lower is better) Translates to: QPGHTCPQRAESLSR*ATSAVGRVSLGCER Trigger: TCGCTCACAACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTCAGCTCTTTGAGGACAAGTATGCCCTGGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 90 bp | GGCAACGCCGGAGGAGGGGTTCCCATCAAAGCTCTCCGGCAAAAATaGCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAACTCCTGGAT | + |
Preference number: 5 (lower is better) Translates to: GNAGGGVPIKALRQK*QAPKDLLAASKLLD Trigger: ATCCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTTTGCCGGAGAGCTTTGATGGGAACCCCTCCTCCGGCGTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | TGTCTTTGCAGGTTGGGGCACAAGGTGGACAGGCCCGGGAACGATTaGTGTCCATGTCGACAGGAGCCAGCTGGTTATTCTTACGGAGGA | + |
Preference number: 5 (lower is better) Translates to: CLCRLGHKVDRPGND*CPCRQEPAGYSYGG Trigger: TCCTCCGTAAGAATAACCAGCTGGCTCCTGTCGACATGGACACCAATCGTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTGCAAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | GTAACCTGTGATCTCCTCCAGGGTTTCGAACACTTGGAGATGCTCTaGCTTCAGTGGGGCAACGCCGGAGGAGGGGTTCCCATCAAAGCT | + |
Preference number: 5 (lower is better) Translates to: VTCDLLQGFEHLEML*LQWGNAGGGVPIKA Trigger: AGCTTTGATGGGAACCCCTCCTCCGGCGTTGCCCCACTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCTGGAGGAGATCACAGGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GAGCCAGGCCAGGTAAGGAATACCCACTGGACCCTACAGTCTGTCAGGGCAGTCCTCCCAAAGATCTTCTaGCAGCCAGCAAACTCCTGG | + |
Preference number: 5 (lower is better) Translates to: EPGQVRNTHWTLQSVRAVLPKIF*QPANSW Trigger: CCAGGAGTTTGCTGGCTGCAAGAAGATCTTTGGGAG...GACTGCCCTGACAGACTGTAGGGTCCAGTGGGTATTCCTTACCTGGCCTGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | TCTCGGTTGTCTAGCACAGCCAGGGCATACTTGTCCTCAAAGAGCTaGGTCCCTCTCACGATGCGCAACCTCTGCAGTGGGACGTGTTTC | + |
Preference number: 5 (lower is better) Translates to: SRLSSTARAYLSSKS*VPLTMRNLCSGTCF Trigger: GAAACACGTCCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTCAGCTCTTTGAGGACAAGTATGCCCTGGCTGTGCTAGACAACCGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | TGGTCCCAAGGTACAGTGTTTACAAAGCAGAGATGGGTGTTGCGGTaGATGAGAGCCAATCCACTGCCCAGCTCCCGCAGTGAGCGTAGC | + |
Preference number: 5 (lower is better) Translates to: WSQGTVFTKQRWVLR*MRANPLPSSRSERS Trigger: GCTACGCTCACTGCGGGAGCTGGGCAGTGGATTGGCTCTCATTCACCGCAACACCCATCTCTGCTTTGTAAACACTGTACCTTGGGACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | GTCCTCAAAGAGCTGAGTCCCTCTCACGATGCGCAACCTCTGCAGTaGGACGTGTTTCACTCGGTTGTGAGCGATGAGCATGTATCCCTG | + |
Preference number: 5 (lower is better) Translates to: VLKELSPSHDAQPLQ*DVFHSVVSDEHVSL Trigger: CAGGGATACATGCTCATCGCTCACAACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTCAGCTCTTTGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 90 bp | GGACAGGCCCGGGAACGATTGGTGTCCATGTCGACAGGAGCCAGCTaGTTATTCTTACGGAGGACATCCTTCCACAAAACCATGTCCTGG | + |
Preference number: 5 (lower is better) Translates to: GQARERLVSMSTGAS*LFLRRTSFHKTMSW Trigger: CCAGGACATGGTTTTGTGGAAGGATGTCCTCCGTAAGAATAACCAGCTGGCTCCTGTCGACATGGACACCAATCGTTCCCGGGCCTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCAAGGCTCTGCAGTCCTTaGGTTACCCCCACTGCCAGG | + |
Preference number: 5 (lower is better) Translates to: GPGPLSDIGWGPVILQISRLCSP*VTPTAR Trigger: CCTGGCAGTGGGGGTAACCAAAGGACTGCAGAGCCT...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | TGCGCAACCTCTGCAGTGGGACGTGTTTCACTCGGTTGTGAGCGATaGGCATGTATCCCTGGACTTCCTGGATGTCCTGCAGGAATGAGA | + |
Preference number: 5 (lower is better) Translates to: CATSAVGRVSLGCER*ACIPGLPGCPAGMR Trigger: TCTCATTCCTGCAGGACATCCAGGAAGTCCAGGGATACATGCTCATCGCTCACAACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 90 bp | AGTGGGGGTCCCTTCAAAGGTACTTGGTGGAGGACCCTGCTCCGATaGGTTCTGGTCCCAGTAATAGAGGTTGTCAAAGGCTGGGCTGAA | + |
Preference number: 5 (lower is better) Translates to: SGGPFKGTWWRTLLR*VLVPVIEVVKGWAE Trigger: TTCAGCCCAGCCTTTGACAACCTCTATTACTGGGACCAGAACTCATCGGAGCAGGGTCCTCCACCAAGTACCTTTGAAGGGACCCCCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GGCCCGGGACCACTCTCAGACATAGGCTGGGGTCCAGTTATTTTACAAATCTCACATGGCAGACAGTGCTaGCCCCTCACATACTCCCTG | + |
Preference number: 5 (lower is better) Translates to: GPGPLSDIGWGPVILQISHGRQC*PLTYSL Trigger: CAGGGAGTATGTGAGGGGCAAGCACTGTCTGCCATG...TGAGATTTGTAAAATAACTGGACCCCAGCCTATGTCTGAGAGTGGTCCCGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 90 bp | AATGACCACCACTATGATCAGGAACAACAGGACGCCCACCACAGTTaGAATGATGAATGTCACTGGGCTGGCTCTCTGCTCTGCTGGGCA | + |
Preference number: 5 (lower is better) Translates to: NDHHYDQEQQDAHHS*NDECHWAGSLLCWA Trigger: TGCCCAGCAGAGCAGAGAGCCAGCCCAGTGACATTCATCATTGCAACTGTGGTGGGCGTCCTGTTGTTCCTGATCATAGTGGTGGTCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCAGGCAGTCAGAATGCTaGGGACCCGTGCAGCCTGCA | + |
Preference number: 5 (lower is better) Translates to: VSNFWKISTHSLQEELCVRQSEC*GPVQPA Trigger: TGCAGGCTGCACGGGTCCCAAGCATTCTGACTGCCT...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCCTCAGCTGTGACCTCTaGGTTGTTCGGGGGACAGAC | + |
Preference number: 5 (lower is better) Translates to: EQNKLCTKTSLGASAVPLLSCDL*VVRGTD Trigger: GTCTGTCCCCCGAACAACCAAGAGGTCACAGCTGAG...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GAACAAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCCGTCGATGGTGCAGATaGGAGGCTGAGGTAGGCGTT | + |
Preference number: 5 (lower is better) Translates to: EQNKLCTKTSLGASAVPLRRWCR*EAEVGV Trigger: AACGCCTACCTCAGCCTCCAATCTGCACCATCGACG...GAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTTGTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | AAAATAAACTCTGTACAAAGACCAGTCTGGGTGCAAGTGCTGTCCCCCTCTTGGACGTGGTTGGGACTCTaGACTAGCACGTTTCGGGCA | + |
Preference number: 5 (lower is better) Translates to: KINSVQRPVWVQVLSPSWTWLGL*TSTFRA Trigger: TGCCCGAAACGTGCTAGTCAAGAGTCCCAACCACGT...CCAAGAGGGGGACAGCACTTGCACCCAGACTGGTCTTTGTACAGAGTTTATTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCCACTTGATGGGCACCTaGCCCCCATCTGCATGGTAT | + |
Preference number: 5 (lower is better) Translates to: VSNFWKISTHSLQEELCVHLMGT*PPSAWY Trigger: ATACCATGCAGATGGGGGCAAGGTGCCCATCAAGTG...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTGCAAACTCCTGGATATaGTCACTGGTGATGGCCCTC | + |
Preference number: 5 (lower is better) Translates to: EGILTPQSLKPKAKLSQTANSWI*SLVMAL Trigger: GAGGGCCATCACCAGTGACAATATCCAGGAGTTTGC...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | CTTTCTAAGGCAAGGAAAACAAGTCACATGGCAATGCTCTCCACAAGCTCCCCTCAGGGTTTCGAACACTaGGAGATGCTCTGGCTTCAG | + |
Preference number: 5 (lower is better) Translates to: LSKARKTSHMAMLSTSSPQGFEH*EMLWLQ Trigger: CTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCTG...AGGGGAGCTTGTGGAGAGCATTGCCATGTGACTTGTTTTCCTTGCCTTAGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GTCTCAAACTTTTGGAAGATCTCTACACACTCACTCCAGGAGGAGCTGTGTGTCCCGAAGTCGGTAATCTaGACGTGGTTGGGACTCTTG | + |
Preference number: 5 (lower is better) Translates to: VSNFWKISTHSLQEELCVPKSVI*TWLGLL Trigger: CAAGAGTCCCAACCACGTCAAGATTACCGACTTCGG...GACACACAGCTCCTCCTGGAGTGAGTGTGTAGAGATCTTCCAAAAGTTTGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS-3UTR CAA 90 bp | GAAGGAATCCTAACTCCCCAGTCCCTCAAGCCCAAAGCCAAATTGTCTCAAACTCCAGGAGAGAGAGTCTaGGGTCTTTCTAGAGTAGCA | + |
Preference number: 5 (lower is better) Translates to: EGILTPQSLKPKAKLSQTPGERV*GLSRVA Trigger: TGCTACTCTAGAAAGACCCAAGACTCTCTCTCCTGG...AGTTTGAGACAATTTGGCTTTGGGCTTGAGGGACTGGGGAGTTAGGATTCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CCGCCACTCCTGGCCGACGAGCTGCGGTGTCTGCGGTaGGCTGTGCTCCCAGTACCTAGGGCAGGGTCTGGG | + |
Preference number: 6 (lower is better) Translates to: PPLLADELRCLR*AVLPVPRAGSG Trigger: CCCAGACCCTGCCCTAGGTACTGGGAGCACAGCCCACCGCAGACACCGCAGCTCGTCGGCCAGGAGTGGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CGGAGCCAGCCCCTTCGGAGGGAGCCAGTGGAGATCTaGGGGGCTCTTCTTCCGAGGGCTCCAGGCCCAGTG | + |
Preference number: 6 (lower is better) Translates to: RSQPLRREPVEI*GALLPRAPGPV Trigger: CACTGGGCCTGGAGCCCTCGGAAGAAGAGCCCCCCAGATCTCCACTGGCTCCCTCCGAAGGGGCTGGCTCCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | TCCTGGCCGACGAGCTGCGGTGTCTGCGGTGGGCTGTaGTCCCAGTACCTAGGGCAGGGTCTGGGGAGAAGA | + |
Preference number: 6 (lower is better) Translates to: SWPTSCGVCGGL*SQYLGQGLGRR Trigger: TCTTCTCCCCAGACCCTGCCCTAGGTACTGGGAGCACAGCCCACCGCAGACACCGCAGCTCGTCGGCCAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | AAGCTGCAGCTCCCGCAGCCCTTCTGGGGTTCTGCCTaGGGCGGCGGTGGTGACGTTGTCCAAAGGGTCTCG | + |
Preference number: 6 (lower is better) Translates to: KLQLPQPFWGSA*GGGGDVVQRVS Trigger: CGAGACCCTTTGGACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGGGCTGCGGGAGCTGCAGCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | TGTGAGACTTCGAAGCTGCAGCTCCCGCAGCCCTTCTaGGGTTCTGCCTGGGGCGGCGGTGGTGACGTTGTC | + |
Preference number: 6 (lower is better) Translates to: CETSKLQLPQPF*GSAWGGGGDVV Trigger: GACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGGGCTGCGGGAGCTGCAGCTTCGAAGTCTCACA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | ACCCTCTGGGGTCAAGGGAGACTGAGGCCGAACCTCTaGCTGGTTCACATACTCGGGCTGGGGGCTGCAGGC | + |
Preference number: 6 (lower is better) Translates to: TLWGQGRLRPNL*LVHILGLGAAG Trigger: GCCTGCAGCCCCCAGCCCGAGTATGTGAACCAGCCAGAGGTTCGGCCTCAGTCTCCCTTGACCCCAGAGGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | GCAGCCCTTCTGGGGTTCTGCCTGGGGCGGCGGTGGTaGCGTTGTCCAAAGGGTCTCGGTTGTCTAGCACAG | + |
Preference number: 6 (lower is better) Translates to: AALLGFCLGRRW*RCPKGLGCLAQ Trigger: CTGTGCTAGACAACCGAGACCCTTTGGACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | ATGGGAGGCGGAGGACCCTCTGGGGTCAAGGGAGACTaGGGCCGAACCTCTGGCTGGTTCACATACTCGGGC | + |
Preference number: 6 (lower is better) Translates to: MGGGGPSGVKGD*GRTSGWFTYSG Trigger: GCCCGAGTATGTGAACCAGCCAGAGGTTCGGCCTCAGTCTCCCTTGACCCCAGAGGGTCCTCCGCCTCCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GCCTCTTCTGGCCGGTTCCCACTGTGGAGTAGGGCCTaGTGCGGGTTCCGGAAGAGCTGGTCCCAAGGTACA | + |
Preference number: 6 (lower is better) Translates to: ASSGRFPLWSRA*CGFRKSWSQGT Trigger: TGTACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCGGCCAGAAGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CCTTCTGGGGTTCTGCCTGGGGCGGCGGTGGTGACGTaGTCCAAAGGGTCTCGGTTGTCTAGCACAGCCAGG | + |
Preference number: 6 (lower is better) Translates to: PSGVLPGAAVVT*SKGSRLSSTAR Trigger: CCTGGCTGTGCTAGACAACCGAGACCCTTTGGACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 90 bp | TCCCGCAGCCCTTCTGGGGTTCTGCCTGGGGCGGCGGTGGTGACGTaGTCCAAAGGGTCTCGGTTGTCTAGCACAGCCAGGGCATACTTG | + |
Preference number: 6 (lower is better) Translates to: SRSPSGVLPGAAVVT*SKGSRLSSTARAYL Trigger: CAAGTATGCCCTGGCTGTGCTAGACAACCGAGACCCTTTGGACAACGTCACCACCGCCGCCCCAGGCAGAACCCCAGAAGGGCTGCGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | GGCCAGGCAGTCAGAATGCTTGGGACCCGTGCAGCCTaGAGCACACTGCTCATGGCAACAGTCAGTGGGCAG | + |
Preference number: 6 (lower is better) Translates to: GQAVRMLGTRAA*STLLMATVSGQ Trigger: CTGCCCACTGACTGTTGCCATGAGCAGTGTGCTGCAGGCTGCACGGGTCCCAAGCATTCTGACTGCCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | TCTTCTGGCCGGTTCCCACTGTGGAGTAGGGCCTGGTaGGGGTTCCGGAAGAGCTGGTCCCAAGGTACAGTG | + |
Preference number: 6 (lower is better) Translates to: SSGRFPLWSRAW*GFRKSWSQGTV Trigger: CACTGTACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCGGCCAGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | TCAAGACCACATGCCTCTTCTGGCCGGTTCCCACTGTaGAGTAGGGCCTGGTGCGGGTTCCGGAAGAGCTGG | + |
Preference number: 6 (lower is better) Translates to: SRPHASSGRFPL*SRAWCGFRKSW Trigger: CCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAGTGGGAACCGGCCAGAAGAGGCATGTGGTCTTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GGCATGGCAGACAGTGCTTGCCCCTCACATACTCCCTaGGGAGCCCCTTCCATACTCGGCACTCCTCCACAC | + |
Preference number: 6 (lower is better) Translates to: GMADSACPSHTP*GAPSILGTPPH Trigger: GTGTGGAGGAGTGCCGAGTATGGAAGGGGCTCCCCAGGGAGTATGTGAGGGGCAAGCACTGTCTGCCATGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GCTCTGTCTCCTTTAGGATCCGCATCTGAGCCTGGTTaGGCACAGCTCCACTGGGCGTCAGCGGCTCCACCA | + |
Preference number: 6 (lower is better) Translates to: ALSPLGSASEPG*AQLHWASAAPP Trigger: TGGTGGAGCCGCTGACGCCCAGTGGAGCTGTGCCCAACCAGGCTCAGATGCGGATCCTAAAGGAGACAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CACTGCTCATGGCAACAGTCAGTGGGCAGCCGGCCCTaGCACCGGGCACAGCCACTAGTACAGATGGTGCCA | + |
Preference number: 6 (lower is better) Translates to: HCSWQQSVGSRP*HRAQPLVQMVP Trigger: TGGCACCATCTGTACTAGTGGCTGTGCCCGGTGCAAGGGCCGGCTGCCCACTGACTGTTGCCATGAGCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | CCTGTGATCTCCTCCAGGGTTTCGAACACTTGGAGATaGTCTGGCTTCAGTGGGGCAACGCCGGAGGAGGGG | + |
Preference number: 6 (lower is better) Translates to: PVISSRVSNTWR*SGFSGATPEEG Trigger: CCCCTCCTCCGGCGTTGCCCCACTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCTGGAGGAGATCACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GATCTCCTCCAGGGTTTCGAACACTTGGAGATGCTCTaGCTTCAGTGGGGCAACGCCGGAGGAGGGGTTCCC | + |
Preference number: 6 (lower is better) Translates to: DLLQGFEHLEML*LQWGNAGGGVP Trigger: GGGAACCCCTCCTCCGGCGTTGCCCCACTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCTGGAGGAGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | ACTCCTCCCTTCAAGATCTCTGTGAGACTTCGAAGCTaGAGCTCCCGCAGCCCTTCTGGGGTTCTGCCTGGG | + |
Preference number: 6 (lower is better) Translates to: TPPFKISVRLRS*SSRSPSGVLPG Trigger: CCCAGGCAGAACCCCAGAAGGGCTGCGGGAGCTGCAGCTTCGAAGTCTCACAGAGATCTTGAAGGGAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | CCAGTACCTAGGGCAGGGTCTGGGGAGAAGAATCCCTaGTGGGGTACCAGGTACTCTTCAGCATCGACCAGC | + |
Preference number: 6 (lower is better) Translates to: PVPRAGSGEKNP*WGTRYSSASTS Trigger: GCTGGTCGATGCTGAAGAGTACCTGGTACCCCAGCAGGGATTCTTCTCCCCAGACCCTGCCCTAGGTACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | TGGAGAGAGGCTCTGCAGTCCTTTGGTTACCCCCACTaGCAGGTCACCATCAAACACATCGGAGCCAGCCCC | + |
Preference number: 6 (lower is better) Translates to: WREALQSFGYPH*QVTIKHIGASP Trigger: GGGGCTGGCTCCGATGTGTTTGATGGTGACCTGGCAGTGGGGGTAACCAAAGGACTGCAGAGCCTCTCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | TCACACCGCTGTGTTCCGTCCTCAGCTGTGACCTCTTaGTTGTTCGGGGGACAGACCAGAGTGCAGGATCCC | + |
Preference number: 6 (lower is better) Translates to: SHRCVPSSAVTS*LFGGQTRVQDP Trigger: GGGATCCTGCACTCTGGTCTGTCCCCCGAACAACCAAGAGGTCACAGCTGAGGACGGAACACAGCGGTGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CAGGACGCCCACCACAGTTGCAATGATGAATGTCACTaGGCTGGCTCTCTGCTCTGCTGGGCAGCCTCGTTC | + |
Preference number: 6 (lower is better) Translates to: QDAHHSCNDECH*AGSLLCWAASF Trigger: GAACGAGGCTGCCCAGCAGAGCAGAGAGCCAGCCCAGTGACATTCATCATTGCAACTGTGGTGGGCGTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | GGGGCGGCGGTGGTGACGTTGTCCAAAGGGTCTCGGTaGTCTAGCACAGCCAGGGCATACTTGTCCTCAAAG | + |
Preference number: 6 (lower is better) Translates to: GAAVVTLSKGSR*SSTARAYLSSK Trigger: CTTTGAGGACAAGTATGCCCTGGCTGTGCTAGACAACCGAGACCCTTTGGACAACGTCACCACCGCCGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CAGGTTGGGGCACAAGGTGGACAGGCCCGGGAACGATaGGTGTCCATGTCGACAGGAGCCAGCTGGTTATTC | + |
Preference number: 6 (lower is better) Translates to: QVGAQGGQARER*VSMSTGASWLF Trigger: GAATAACCAGCTGGCTCCTGTCGACATGGACACCAATCGTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CTCACACCGCTGTGTTCCGTCCTCAGCTGTGACCTCTaGGTTGTTCGGGGGACAGACCAGAGTGCAGGATCC | + |
Preference number: 6 (lower is better) Translates to: LTPLCSVLSCDL*VVRGTDQSAGS Trigger: GGATCCTGCACTCTGGTCTGTCCCCCGAACAACCAAGAGGTCACAGCTGAGGACGGAACACAGCGGTGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CAGGGTTCTCTGCAGTGGGGGTCCCTTCAAAGGTACTaGGTGGAGGACCCTGCTCCGATGAGTTCTGGTCCC | + |
Preference number: 6 (lower is better) Translates to: QGSLQWGSLQRY*VEDPAPMSSGP Trigger: GGGACCAGAACTCATCGGAGCAGGGTCCTCCACCAAGTACCTTTGAAGGGACCCCCACTGCAGAGAACCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 90 bp | CATTTCTCACACCGCTGTGTTCCGTCCTCAGCTGTGACCTCTTGGTaGTTCGGGGGACAGACCAGAGTGCAGGATCCCACTTCCGTGGAG | + |
Preference number: 6 (lower is better) Translates to: HFSHRCVPSSAVTSW*FGGQTRVQDPTSVE Trigger: CTCCACGGAAGTGGGATCCTGCACTCTGGTCTGTCCCCCGAACAACCAAGAGGTCACAGCTGAGGACGGAACACAGCGGTGTGAGAAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 90 bp | GCTGCATTTCTCACACCGCTGTGTTCCGTCCTCAGCTGTGACCTCTaGGTTGTTCGGGGGACAGACCAGAGTGCAGGATCCCACTTCCGT | + |
Preference number: 6 (lower is better) Translates to: AAFLTPLCSVLSCDL*VVRGTDQSAGSHFR Trigger: ACGGAAGTGGGATCCTGCACTCTGGTCTGTCCCCCGAACAACCAAGAGGTCACAGCTGAGGACGGAACACAGCGGTGTGAGAAATGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | GGGCCGGGCAGTGCAGCTCACAGATACCACTATGATTaGAGTGGAGGCAGGCCAGGCAGTCAGAATGCTTGG | + |
Preference number: 6 (lower is better) Translates to: GPGSAAHRYHYD*SGGRPGSQNAW Trigger: CCAAGCATTCTGACTGCCTGGCCTGCCTCCACTTCAATCATAGTGGTATCTGTGAGCTGCACTGCCCGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | CTCGTTCGTCCAGGTCCACACATGAGTGGGTGCAGTTaGTGGGGCATGGCTGACATATGCCCTCCTCATCCG | + |
Preference number: 6 (lower is better) Translates to: LVRPGPHMSGCS*WGMADICPPHP Trigger: CGGATGAGGAGGGCATATGTCAGCCATGCCCCATCAACTGCACCCACTCATGTGTGGACCTGGACGAACGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | CTCTGCTGGGCAGCCTCGTTCGTCCAGGTCCACACATaGGTGGGTGCAGTTGATGGGGCATGGCTGACATAT | + |
Preference number: 6 (lower is better) Translates to: LCWAASFVQVHT*VGAVDGAWLTY Trigger: ATATGTCAGCCATGCCCCATCAACTGCACCCACTCATGTGTGGACCTGGACGAACGAGGCTGCCCAGCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CAGGGTTTCGAACACTTGGAGATGCTCTGGCTTCAGTaGGGCAACGCCGGAGGAGGGGTTCCCATCAAAGCT | + |
Preference number: 6 (lower is better) Translates to: QGFEHLEMLWLQ*GNAGGGVPIKA Trigger: AGCTTTGATGGGAACCCCTCCTCCGGCGTTGCCCCACTGAAGCCAGAGCATCTCCAAGTGTTCGAAACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | AGCAGCCGTGCCAGCCCGAAGTCGGTAATCTTGACGTaGTTGGGACTCTTGACTAGCACGTTTCGGGCAGCT | + |
Preference number: 6 (lower is better) Translates to: SSRASPKSVILT*LGLLTSTFRAA Trigger: AGCTGCCCGAAACGTGCTAGTCAAGAGTCCCAACCACGTCAAGATTACCGACTTCGGGCTGGCACGGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GCACATCCAGGCCTAGGTACTCAGGGTTCTCTGCAGTaGGGGTCCCTTCAAAGGTACTTGGTGGAGGACCCT | + |
Preference number: 6 (lower is better) Translates to: AHPGLGTQGSLQ*GSLQRYLVEDP Trigger: AGGGTCCTCCACCAAGTACCTTTGAAGGGACCCCCACTGCAGAGAACCCTGAGTACCTAGGCCTGGATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CAGGACTCTCACCCCAACAGTGATTGTCTTTGCAGGTaGGGGCACAAGGTGGACAGGCCCGGGAACGATTGG | + |
Preference number: 6 (lower is better) Translates to: QDSHPNSDCLCR*GHKVDRPGNDW Trigger: CCAATCGTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTGCAAAGACAATCACTGTTGGGGTGAGAGTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 90 bp | TTGTCTTTGCAGGTTGGGGCACAAGGTGGACAGGCCCGGGAACGATaGGTGTCCATGTCGACAGGAGCCAGCTGGTTATTCTTACGGAGG | + |
Preference number: 6 (lower is better) Translates to: LSLQVGAQGGQARER*VSMSTGASWLFLRR Trigger: CCTCCGTAAGAATAACCAGCTGGCTCCTGTCGACATGGACACCAATCGTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTGCAAAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | TCTAGCACAGCCAGGGCATACTTGTCCTCAAAGAGCTaGGTCCCTCTCACGATGCGCAACCTCTGCAGTGGG | + |
Preference number: 6 (lower is better) Translates to: SSTARAYLSSKS*VPLTMRNLCSG Trigger: CCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTCAGCTCTTTGAGGACAAGTATGCCCTGGCTGTGCTAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | AGTCTTCAGGACTCTCACCCCAACAGTGATTGTCTTTaGAGGTTGGGGCACAAGGTGGACAGGCCCGGGAAC | + |
Preference number: 6 (lower is better) Translates to: SLQDSHPNSDCL*RLGHKVDRPGN Trigger: GTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTGCAAAGACAATCACTGTTGGGGTGAGAGTCCTGAAGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | TGCCCAGACCATAGCATACTCCAGCACAGGGCTTGCTaGATTTCTCACACCGCTGTGTTCCGTCCTCAGCTG | + |
Preference number: 6 (lower is better) Translates to: CPDHSILQHRAC*ISHTAVFRPQL Trigger: CAGCTGAGGACGGAACACAGCGGTGTGAGAAATGCAGCAAGCCCTGTGCTGGAGTATGCTATGGTCTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | CCATGCCCAGACCATAGCATACTCCAGCACAGGGCTTaGTGCATTTCTCACACCGCTGTGTTCCGTCCTCAG | + |
Preference number: 6 (lower is better) Translates to: PCPDHSILQHRA*CISHTAVFRPQ Trigger: CTGAGGACGGAACACAGCGGTGTGAGAAATGCAGCAAGCCCTGTGCTGGAGTATGCTATGGTCTGGGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GAGCTGAGTCCCTCTCACGATGCGCAACCTCTGCAGTaGGACGTGTTTCACTCGGTTGTGAGCGATGAGCAT | + |
Preference number: 6 (lower is better) Translates to: ELSPSHDAQPLQ*DVFHSVVSDEH Trigger: ATGCTCATCGCTCACAACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTCAGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CCAACAGTGATTGTCTTTGCAGGTTGGGGCACAAGGTaGACAGGCCCGGGAACGATTGGTGTCCATGTCGAC | + |
Preference number: 6 (lower is better) Translates to: PTVIVFAGWGTR*TGPGTIGVHVD Trigger: GTCGACATGGACACCAATCGTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTGCAAAGACAATCACTGTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | AGGACTCTCACCCCAACAGTGATTGTCTTTGCAGGTTaGGGCACAAGGTGGACAGGCCCGGGAACGATTGGT | + |
Preference number: 6 (lower is better) Translates to: RTLTPTVIVFAG*GTRWTGPGTIG Trigger: ACCAATCGTTCCCGGGCCTGTCCACCTTGTGCCCCAACCTGCAAAGACAATCACTGTTGGGGTGAGAGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CTGTGGAGTAGGGCCTGGTGCGGGTTCCGGAAGAGCTaGTCCCAAGGTACAGTGTTTACAAAGCAGAGATGG | + |
Preference number: 6 (lower is better) Translates to: LWSRAWCGFRKS*SQGTVFTKQRW Trigger: CCATCTCTGCTTTGTAAACACTGTACCTTGGGACCAGCTCTTCCGGAACCCGCACCAGGCCCTACTCCACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | GGGCCTAAGTCCTCGTTCTGGATGACCACAAAGCGCTaGGGGTCCCTTGCCATACGGGAGAATTCTGATACC | + |
Preference number: 6 (lower is better) Translates to: GPKSSFWMTTKR*GSLAIRENSDT Trigger: GGTATCAGAATTCTCCCGTATGGCAAGGGACCCCCAGCGCTTTGTGGTCATCCAGAACGAGGACTTAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | ATGTCCAGCAGCCGTGCCAGCCCGAAGTCGGTAATCTaGACGTGGTTGGGACTCTTGACTAGCACGTTTCGG | + |
Preference number: 6 (lower is better) Translates to: MSSSRASPKSVI*TWLGLLTSTFR Trigger: CCGAAACGTGCTAGTCAAGAGTCCCAACCACGTCAAGATTACCGACTTCGGGCTGGCACGGCTGCTGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | CGCAACCTCTGCAGTGGGACGTGTTTCACTCGGTTGTaGGCGATGAGCATGTATCCCTGGACTTCCTGGATG | + |
Preference number: 6 (lower is better) Translates to: RNLCSGTCFTRL*AMSMYPWTSWM Trigger: CATCCAGGAAGTCCAGGGATACATGCTCATCGCTCACAACCGAGTGAAACACGTCCCACTGCAGAGGTTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | CAGTGTTTACAAAGCAGAGATGGGTGTTGCGGTGAATaGGAGCCAATCCACTGCCCAGCTCCCGCAGTGAGC | + |
Preference number: 6 (lower is better) Translates to: QCLQSRDGCCGE*EPIHCPAPAVS Trigger: GCTCACTGCGGGAGCTGGGCAGTGGATTGGCTCTCATTCACCGCAACACCCATCTCTGCTTTGTAAACACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 90 bp | CTAGGTACTCAGGGTTCTCTGCAGTGGGGGTCCCTTCAAAGGTACTaGGTGGAGGACCCTGCTCCGATGAGTTCTGGTCCCAGTAATAGA | + |
Preference number: 6 (lower is better) Translates to: LGTQGSLQWGSLQRY*VEDPAPMSSGPSNR Trigger: TCTATTACTGGGACCAGAACTCATCGGAGCAGGGTCCTCCACCAAGTACCTTTGAAGGGACCCCCACTGCAGAGAACCCTGAGTACCTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | TCTGCAGTGGGACGTGTTTCACTCGGTTGTGAGCGATaGGCATGTATCCCTGGACTTCCTGGATGTCCTGCA | + |
Preference number: 6 (lower is better) Translates to: SAVGRVSLGCER*ACIPGLPGCPA Trigger: TGCAGGACATCCAGGAAGTCCAGGGATACATGCTCATCGCTCACAACCGAGTGAAACACGTCCCACTGCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | GGTACAGTGTTTACAAAGCAGAGATGGGTGTTGCGGTaGATGAGAGCCAATCCACTGCCCAGCTCCCGCAGT | + |
Preference number: 6 (lower is better) Translates to: GTVFTKQRWVLR*MRANPLPSSRS Trigger: ACTGCGGGAGCTGGGCAGTGGATTGGCTCTCATTCACCGCAACACCCATCTCTGCTTTGTAAACACTGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | TCCACACATGAGTGGGTGCAGTTGATGGGGCATGGCTaGCATATGCCCTCCTCATCCGGGTACTTCCAGATA | + |
Preference number: 6 (lower is better) Translates to: STHEWVQLMGHG*HMPSSSGYFQI Trigger: TATCTGGAAGTACCCGGATGAGGAGGGCATATGTCAGCCATGCCCCATCAACTGCACCCACTCATGTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | CATACTTGTCCTCAAAGAGCTGAGTCCCTCTCACGATaGGCAACCTCTGCAGTGGGACGTGTTTCACTCGGT | + |
Preference number: 6 (lower is better) Translates to: HTCPQRAESLSR*ATSAVGRVSLG Trigger: ACCGAGTGAAACACGTCCCACTGCAGAGGTTGCGCATCGTGAGAGGGACTCAGCTCTTTGAGGACAAGTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | GGAGGAGGGGTTCCCATCAAAGCTCTCCGGCAAAAATaGCAGGCTCCCAAAGATCTTCTTGCAGCCAGCAAA | + |
Preference number: 6 (lower is better) Translates to: GGGVPIKALRQK*QAPKDLLAASK Trigger: TTTGCTGGCTGCAAGAAGATCTTTGGGAGCCTGGCATTTTTGCCGGAGAGCTTTGATGGGAACCCCTCCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS GCA 72 bp | TGCATGGTATTCAGTCTCATCAATGTCCAGCAGCCGTaGCAGCCCGAAGTCGGTAATCTTGACGTGGTTGGG | + |
Preference number: 6 (lower is better) Translates to: CMVFSLINVQQP*QPEVGNLDVVG Trigger: CCCAACCACGTCAAGATTACCGACTTCGGGCTGGCACGGCTGCTGGACATTGATGAGACTGAATACCATGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS TCA 72 bp | CCCTTCAAAGGTACTTGGTGGAGGACCCTGCTCCGATaGGTTCTGGTCCCAGTAATAGAGGTTGTCAAAGGC | + |
Preference number: 6 (lower is better) Translates to: PFKGTWWRTLLR*VLVPVIEVVKG Trigger: GCCTTTGACAACCTCTATTACTGGGACCAGAACTCATCGGAGCAGGGTCCTCCACCAAGTACCTTTGAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CCA 72 bp | CGGGAACGATTGGTGTCCATGTCGACAGGAGCCAGCTaGTTATTCTTACGGAGGACATCCTTCCACAAAACC | + |
Preference number: 6 (lower is better) Translates to: RERLVSMSTGAS*LFLRRTSFHKT Trigger: GGTTTTGTGGAAGGATGTCCTCCGTAAGAATAACCAGCTGGCTCCTGTCGACATGGACACCAATCGTTCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 90 bp | AGCAGCCTACGCATGGTATACTTCCGGATCTTCTGTCGCCTTCGTTaGATTAGGATTCCAATGACCACCACTATGATCAGGAACAACAGG | + |
Preference number: 6 (lower is better) Translates to: SSLRMVYFRIFCRLR*IRIPMTTTMIRNNR Trigger: CCTGTTGTTCCTGATCATAGTGGTGGTCATTGGAATCCTAATCAAACGAAGGCGACAGAAGATCCGGAAGTATACCATGCGTAGGCTGCT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | CGCATGGTATACTTCCGGATCTTCTGTCGCCTTCGTTaGATTAGGATTCCAATGACCACCACTATGATCAGG | + |
Preference number: 6 (lower is better) Translates to: RMVYFRIFCRLR*IRIPMTTTMIR Trigger: CCTGATCATAGTGGTGGTCATTGGAATCCTAATCAAACGAAGGCGACAGAAGATCCGGAAGTATACCATGCG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |
||
CDS CAA 72 bp | ACACCAGCCATGACGTACGCTTCATCTAGGATTTCTTaGTTAGCTTTAGGAGATGTGTTTTCCCTCAACACC | + |
Preference number: 6 (lower is better) Translates to: TPAMTYASSRIS*LALGDVFSLNT Trigger: GGTGTTGAGGGAAAACACATCTCCTAAAGCTAACAAAGAAATCCTAGATGAAGCGTACGTCATGGCTGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058295.6 |