Pregenerated sensors for ERAL1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020832Ensembl transcript IDs: ENSMUST00000021183.4
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGGTTGGGCAAGCACTGTGCAGACTCGGCAATGCCAGGCTGGCTaGCACAGGACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGAT | + |
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Preference number: 1 (lower is better) Translates to: HGWASTVQTRQCQAG*HRTFTGPRASPPID Trigger: ATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGCCCAACCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR GCA 90 bp | GCCCCGAGAACTGAGCTAAGTGGAAACATGGTTGGGCAAGCACTGTaGAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAG | + |
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Preference number: 1 (lower is better) Translates to: APRTELSGNMVGQAL*RLGNARLAGTGPSQ Trigger: CTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGCCCAACCATGTTTCCACTTAGCTCAGTTCTCGGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR TCA 90 bp | CTTCCCAGTCCTGTAGACCCCTCTGACAGGGGTAGTTCTAGTCAGTaGCTCTGCCAGCAGCTTGAGCAGGGATCCACTGGGAGAAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: LPSPVDPSDRGSSSQ*LCQQLEQGSTGRSN Trigger: GTTGCTTCTCCCAGTGGATCCCTGCTCAAGCTGCTGGCAGAGTCACTGACTAGAACTACCCCTGTCAGAGGGGTCTACAGGACTGGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CCA 90 bp | CCATCCTCTGCTACATATGCAGCTGTAGCTATGGGTCCCTCACAATaGAAACCAGTCAGTGTCCATGGCCCTTCCCAGTCCTGTAGACCC | + |
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Preference number: 1 (lower is better) Translates to: PSSATYAAVAMGPSQ*KPVSVHGPSQSCRP Trigger: GGGTCTACAGGACTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAGCTACAGCTGCATATGTAGCAGAGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR-3UTR TCA 90 bp | ACTGTGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAGGACCAACTCTGCCAGCAGCTTaGGCAGGGATCCACTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: TVQTRQCQAGWHRTFTGPTLPAA*AGIHWE Trigger: CTCCCAGTGGATCCCTGCTCAAGCTGCTGGCAGAGT...TGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CAA 90 bp | CTGGCTGGCACAGGACCTTCACAGGACCAAGGGCCTCTCCTCCCATaGATGACCGACCGACTAGGCCATCCTCTGCTACATATGCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LAGTGPSQDQGPLLP*MTDRLGHPLLHMQL Trigger: CAGCTGCATATGTAGCAGAGGATGGCCTAGTCGGTCGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTCCTGTGCCAGCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR-3UTR CCA 90 bp | GTTGGGCAAGCACTGTGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTATGGGTCCCTCACAATaGAAACCAGTCAGTGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: VGQALCRLGNARLAGTGPMGPSQ*KPVSVH Trigger: ATGGACACTGACTGGTTTCCATTGTGAGGGACCCAT...AGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGCCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR-3UTR CCA 90 bp | GACCTTTGTGAGTTTAAAGCTAGCCTGATCTATGTAGAGATAGCCAGCCAGTCACAATGCCAGGCTGGCTaGCACAGGACCTTCACAGGA | + |
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Preference number: 2 (lower is better) Translates to: DLCEFKASLIYVEIASQSQCQAG*HRTFTG Trigger: TCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTG...TGACTGGCTGGCTATCTCTACATAGATCAGGCTAGCTTTAAACTCACAAAGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR-3UTR CCA 90 bp | ATCCGAGGCTGGGTGGTTGGATGGGATGGGAGGACCTTTGTGAGTTTAAAGCTAATGGGTTCTAGGGTGTaGTTCAGCATGTATCCTATA | + |
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Preference number: 2 (lower is better) Translates to: IRGWVVGWDGRTFVSLKLMGSRV*FSMYPI Trigger: TATAGGATACATGCTGAACCACACCCTAGAACCCAT...TAGCTTTAAACTCACAAAGGTCCTCCCATCCCATCCAACCACCCAGCCTCGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CCA 72 bp | GCAAGCACTGTGCAGACTCGGCAATGCCAGGCTGGCTaGCACAGGACCTTCACAGGACCAAGGGCCTCTCCT | + |
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Preference number: 3 (lower is better) Translates to: ASTVQTRQCQAG*HRTFTGPRASP Trigger: AGGAGAGGCCCTTGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR TCA 72 bp | CCTGTAGACCCCTCTGACAGGGGTAGTTCTAGTCAGTaGCTCTGCCAGCAGCTTGAGCAGGGATCCACTGGG | + |
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Preference number: 3 (lower is better) Translates to: PVDPSDRGSSSQ*LCQQLEQGSTG Trigger: CCCAGTGGATCCCTGCTCAAGCTGCTGGCAGAGTCACTGACTAGAACTACCCCTGTCAGAGGGGTCTACAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR GCA 72 bp | AAACATGGTTGGGCAAGCACTGTGCAGACTCGGCAATaGCAGGCTGGCTGGCACAGGACCTTCACAGGACCA | + |
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Preference number: 3 (lower is better) Translates to: KHGWASTVQTRQ*QAGWHRTFTGP Trigger: TGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGCCCAACCATGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR GCA 72 bp | ACTGAGCTAAGTGGAAACATGGTTGGGCAAGCACTGTaGAGACTCGGCAATGCCAGGCTGGCTGGCACAGGA | + |
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Preference number: 3 (lower is better) Translates to: TELSGNMVGQAL*RLGNARLAGTG Trigger: TCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGCCCAACCATGTTTCCACTTAGCTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CCA 72 bp | GCTACATATGCAGCTGTAGCTATGGGTCCCTCACAATaGAAACCAGTCAGTGTCCATGGCCCTTCCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: ATYAAVAMGPSQ*KPVSVHGPSQS Trigger: GGACTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAGCTACAGCTGCATATGTAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR-3UTR CAA 90 bp | GACCTTTGTGAGTTTAAAGCTAGCCTGATCTATGTAGAGATAGCCAGCCAGTCAACTCAGGGCAAGAGTTaGGTTCCAATGCTAGCGGGG | + |
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Preference number: 3 (lower is better) Translates to: DLCEFKASLIYVEIASQSTQGKS*VPMLAG Trigger: CCCCGCTAGCATTGGAACCAAACTCTTGCCCTGAGT...TGACTGGCTGGCTATCTCTACATAGATCAGGCTAGCTTTAAACTCACAAAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CCA 72 bp | GAGCACTTGTCATTTAACTTTATTAGCATCCGAGGCTaGGTGGTTGGATGGGATGGGAGGACCTTTGTGAGT | + |
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Preference number: 3 (lower is better) Translates to: EHLSFNFISIRG*VVGWDGRTFVS Trigger: ACTCACAAAGGTCCTCCCATCCCATCCAACCACCCAGCCTCGGATGCTAATAAAGTTAAATGACAAGTGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CCA 72 bp | TTTAACTTTATTAGCATCCGAGGCTGGGTGGTTGGATaGGATGGGAGGACCTTTGTGAGTTTAAAGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: FNFISIRGWVVG*DGRTFVSLKLA Trigger: GGCTAGCTTTAAACTCACAAAGGTCCTCCCATCCCATCCAACCACCCAGCCTCGGATGCTAATAAAGTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | ACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCGACCGACTAGGCCATCAGGGCCAGGGCAGTaGGTGCTGGAGCGTGAGCGC | + |
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Preference number: 4 (lower is better) Translates to: TFTGPRASPPIDDRPTRPSGPGQ*VLERER Trigger: GCGCTCACGCTCCAGCACCCACTGCCCTGGCCCTGA...TGGCCTAGTCGGTCGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | TGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAGGACCAAGGGATGACCCCCAGAGCTTaGCATCGAGTGGTGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: CRLGNARLAGTGPSQDQGMTPRA*HRVVCT Trigger: GGTGCACACCACTCGATGTCAAGCTCTGGGGGTCAT...CCCTTGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | ACAGGACCAAGGGCCTCTCCTCCCATTGATGACCGACCGACTAGGCCATCCTCTCATTCCCTCCCTGCATaGGAACCCACCTGTCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: TGPRASPPIDDRPTRPSSHSLPA*EPTCRA Trigger: GGCCCGACAGGTGGGTTCGCATGCAGGGAGGGAATG...AGAGGATGGCCTAGTCGGTCGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAGGACCATCCCAGGGTCCTGGCTaGGCCTGTGTCAGAAGGTAT | + |
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Preference number: 4 (lower is better) Translates to: TVQTRQCQAGWHRTFTGPSQGPG*ACVRRY Trigger: ATACCTTCTGACACAGGCCCAGCCAGGACCCTGGGA...TGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | TGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAGGACCAAGGGCAGCTCCAGGAGAACTaGCTTCTGCTTCAGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: CRLGNARLAGTGPSQDQGQLQEN*LLLQAI Trigger: GATTGCCTGAAGCAGAAGTCAGTTCTCCTGGAGCTG...CCCTTGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | TGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAGGACCAAGGGTTACGGCCCAGCAGCTaGTTGGAAAGTGTTGACTTC | + |
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Preference number: 4 (lower is better) Translates to: CRLGNARLAGTGPSQDQGLRPSS*LESVDF Trigger: GAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAA...CCCTTGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | ACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCGACCGACTAGGCCATCACAGAGAGGCGGATaGGAACGTCACAGTGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: TFTGPRASPPIDDRPTRPSQRGG*ERHSGR Trigger: TCTTCCACTGTGACGTTCTCATCCGCCTCTCTGTGA...TGGCCTAGTCGGTCGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | GTAGCTATGGGTCCCTCACAATGGAAACCAGTCAGTGTCCATGGCCCTTCCCAGCCGGCCCACCTCCTGTaGAATCTGGGAGATCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: VAMGPSQWKPVSVHGPSQPAHLL*NLGDQE Trigger: CTCTTGATCTCCCAGATTGCACAGGAGGTGGGCCGG...CTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAGCTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | ACTGTGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACAGGACCATTCCATGCTCGTCCATaGATCTTCCAGCAAAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TVQTRQCQAGWHRTFTGPFHARP*IFQQRA Trigger: CGCTCTTTGCTGGAAGATCCATGGACGAGCATGGAA...TGGTCCTGTGAAGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CAA 72 bp | ACAGGACCTTCACAGGACCAAGGGCCTCTCCTCCCATaGATGACCGACCGACTAGGCCATCCTCTGCTACAT | + |
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Preference number: 4 (lower is better) Translates to: TGPSQDQGPLLP*MTDRLGHPLLH Trigger: ATGTAGCAGAGGATGGCCTAGTCGGTCGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGTCCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | CTATGGGTCCCTCACAATGGAAACCAGTCAGTGTCCATGGCCCTTCCCAGTCCTACCTTCAGTGAGGGCTaGTGTCAGCTCCAGGAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LWVPHNGNQSVSMALPSPTFSEG*CQLQEN Trigger: GTTCTCCTGGAGCTGACAGCAGCCCTCACTGAAGGT...AGGACTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | GTAGCTATGGGTCCCTCACAATGGAAACCAGTCAGTGTCCATGGCCCTTCCCAGACCAAGAGTAGATTCTaGTCATCTCTGTGCACCGAC | + |
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Preference number: 4 (lower is better) Translates to: VAMGPSQWKPVSVHGPSQTKSRF*SSLCTD Trigger: GTCGGTGCACAGAGATGAGCAGAATCTACTCTTGGT...CTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAGCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | AGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGGGCCAGGGCAGTGGGTaGTGGAGCGTGAGCGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: RREKLCSYQQLETQGKSLGQGSG*WSVSAR Trigger: CCTTGCGCTCACGCTCCAGCACCCACTGCCCTGGCC...CAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | ATCCGAGGCTGGGTGGTTGGATGGGATGGGAGGACCTTTGTGAGTTTAAAGCTAGGACCTGAGAGAACTTaGTCAAGCACTGCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: IRGWVVGWDGRTFVSLKLGPERT*SSTAAP Trigger: AGGTGCTGCAGTGCTTGACCAAGTTCTCTCAGGTCC...TAGCTTTAAACTCACAAAGGTCCTCCCATCCCATCCAACCACCCAGCCTCGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | CTATGGGTCCCTCACAATGGAAACCAGTCAGTGTCCATGGCCCTTCCCAGTCCTTCAAGCAGAATCACTTaGGTCTCCTTCTCTGTGATG | + |
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Preference number: 4 (lower is better) Translates to: LWVPHNGNQSVSMALPSPSSRIT*VSFSVM Trigger: CATCACAGAGAAGGAGACCCAAGTGATTCTGCTTGA...AGGACTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | GTAGTTCTAGTCAGTGACTCTGCCAGCAGCTTGAGCAGGGATCCACTGGGAGAAACCAGAAGGTTCTGTTaGATCACTAGCTCTCCACTT | + |
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Preference number: 4 (lower is better) Translates to: VVLVSDSASSLSRDPLGETRRFC*ITSSPL Trigger: AAGTGGAGAGCTAGTGATCCAACAGAACCTTCTGGT...TTCTCCCAGTGGATCCCTGCTCAAGCTGCTGGCAGAGTCACTGACTAGAACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | TGGGAGGACCTTTGTGAGTTTAAAGCTAGCCTGATCTATGTAGAGATAGCCAGCAGGATGCTAGGGACCTaGGAGAACTTGGTCAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: WEDLCEFKASLIYVEIASRMLGT*ENLVKH Trigger: GTGCTTGACCAAGTTCTCTCAGGTCCCTAGCATCCT...GCTGGCTATCTCTACATAGATCAGGCTAGCTTTAAACTCACAAAGGTCCTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | GGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGGGCCAGCCAATTCTCTaGGGGTTCCTCACTGAGTGT | + |
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Preference number: 4 (lower is better) Translates to: GTWGRREKLCSYQQLETQGQPIL*GFLTEC Trigger: ACACTCAGTGAGGAACCCTCAGAGAATTGGCTGGCC...CTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | GGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGAACTTGGTCAAGCACTaGAGCACCTGGGGGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTWGRREKLCSYQQLETQNLVKH*STWGLS Trigger: GCTCAACCCCCAGGTGCTGCAGTGCTTGACCAAGTT...CTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGAGGCCCAGCAGCTGATTaGAAAGTGTTGACTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: KKKETRVLMQLQGEELGGGPAAD*KVLTSL Trigger: CAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCC...TCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | AGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGGGGGACCAGAGAAAGTaGAGCCCACGACACAGGACA | + |
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Preference number: 4 (lower is better) Translates to: RREKLCSYQQLETQGKSLGDQRK*SPRHRT Trigger: TGTCCTGTGTCGTGGGCTCCACTTTCTCTGGTCCCC...CAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | AATAAAAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGAACTCCCAGGGTCCTaGCTGGGCCTGTGTCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: NKRKRKHGSLCNFKVRNLELPGS*LGLCQK Trigger: CTTCTGACACAGGCCCAGCCAGGACCCTGGGAGTTC...CAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | AATAAAAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGTGAGCACACCACTGTaGAACTCCCAGGGTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: NKRKRKHGSLCNFKVRNLVSTPL*NSQGPG Trigger: GCCAGGACCCTGGGAGTTCCACAGTGGTGTGCTCAC...CAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTTTTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | GGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGCCTGGTCCACTTGTCTaGCACATCCACAAGAACTAC | + |
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Preference number: 4 (lower is better) Translates to: GTWGRREKLCSYQQLETQPGPLV*HIHKNY Trigger: GTAGTTCTTGTGGATGTGTCAGACAAGTGGACCAGG...CTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | GACCTTTGTGAGTTTAAAGCTAGCCTGATCTATGTAGAGATAGCCAGCCAGTCAATCAAGAGGCCCTTCTaGCCAATCAGGATCCTCACA | + |
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Preference number: 4 (lower is better) Translates to: DLCEFKASLIYVEIASQSIKRPF*PIRILT Trigger: TGTGAGGATCCTGATTGGTCAGAAGGGCCTCTTGAT...TGACTGGCTGGCTATCTCTACATAGATCAGGCTAGCTTTAAACTCACAAAGGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | AATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGGTTCCAATGCGAGCGCTCCAGATGGTaGCTCTTCTGTTTAACAGGA | + |
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Preference number: 4 (lower is better) Translates to: NCVPTNNWKLRARVWFQCERSRW*LFCLTG Trigger: TCCTGTTAAACAGAAGAGGCACCATCTGGAGCGCTC...GCATTGGAACCAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGACGTGAGCGCAAGGCCTaGTTGATATTAAGCTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KKKETRVLMQLQGEELGGRERKA*LILSFL Trigger: CAAGAAGCTTAATATCAAGCAGGCCTTGCGCTCACG...TCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | TCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGAGAAGAGAAAAATTGTGTTCACCTCCTGTGCAATCTaGGAGATCAAGAGGCCCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLCNFKVRNLGEKRKIVFTSCAI*EIKRPF Trigger: GAAGGGCCTCTTGATCTCCCAGATTGCACAGGAGGT...GAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | CAACTTCAAGGTGAGGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACAACGAACTGTCAGGCTaGGAAAATCCAAGGATACGG | + |
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Preference number: 4 (lower is better) Translates to: QLQGEELGGEEKNCVPTNNELSG*ENPRIR Trigger: CCGTATCCTTGGATTTTCTCAGCCTGACAGTTCGTT...GTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR TCA 90 bp | CAACTTCAAGGTGAGGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACATCAGGATCCTCACATaGGATTCTTTGGGCACCAGA | + |
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Preference number: 4 (lower is better) Translates to: QLQGEELGGEEKNCVPTNIRILT*DSLGTR Trigger: TCTGGTGCCCAAAGAATCTCATGTGAGGATCCTGAT...GTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | AAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGAAGGAGAACTGACTTCTaGTTCAGGCAATCTACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKKETRVLMQLQGEELGGRRTDF*FRQSTL Trigger: CAAGGTAGATTGCCTGAAGCAGAAGTCAGTTCTCCT...TCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | GGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGAAAGAGCGCTCCAGATaGTGCCTCTTCTGTTTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GTWGRREKLCSYQQLETQKERSR*CLFCLT Trigger: TGTTAAACAGAAGAGGCACCATCTGGAGCGCTCTTT...CTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | AAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGATCACATGAGATTCTTTaGGCACCAGAAGGTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KKKETRVLMQLQGEELGGSHEIL*APEGSV Trigger: AACAGAACCTTCTGGTGCCCAAAGAATCTCATGTGA...TCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CCA 90 bp | TCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGAGAAGAGAAAAATTGTGTTCATGAGAACGTCACAGTaGAAGATGTCCATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLCNFKVRNLGEKRKIVFMRTSQ*KMSMRS Trigger: GGACCTCATGGACATCTTCCACTGTGACGTTCTCAT...GAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| 3UTR CAA 72 bp | AAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTaGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: KHGSLCNFKVRN*GEKRKIVFLPT Trigger: TGTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR GCA 90 bp | AATAAAAGAAAAAGGAAACACGGGTCCTTATGCAACTTCAAGGTGAGGAACTTGGATCAGCAGATTCCATaGTCGTCCATGGATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NKRKRKHGSLCNFKVRNLDQQIP*SSMDLP Trigger: TGGAAGATCCATGGACGAGCATGGAATCTGCTGATC...CAAGTTCCTCACCTTGAAGTTGCATAAGGACCCGTGTTTCCTTTTTCTTTTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS-3UTR GCA 90 bp | AATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGGTTCCAATGCTGTGTCAGAAGGTATTaGTTCAATGTGTTCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: NCVPTNNWKLRARVWFQCCVRRY*FNVFTS Trigger: GGATGTGAACACATTGAAGCAATACCTTCTGACACA...GCATTGGAACCAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS GCA 90 bp | TTACCTAGAAGACAGCCGGGCGGAGCAAGCCATTCCCTCCCTGCATaGGAACCCACCTGTCGGGCCCCTAACAAGGCCCGAACGAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPRRQPGGASHSLPA*EPTCRAPNKARTSP Trigger: TGGGCTCGTTCGGGCCTTGTTAGGGGCCCGACAGGTGGGTTCGCATGCAGGGAGGGAATGGCTTGCTCCGCCCGGCTGTCTTCTAGGTAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS GCA 90 bp | GGCATGTCGGGAGTGTGCACCAAGAGTAGATTCTGCTCATCTCTGTaGACCGACACCGCGGGGACGCTCGGAACCAACGAACTGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMSGVCTKSRFCSSL*TDTAGTLGTNELSG Trigger: GCCTGACAGTTCGTTGGTTCCGAGCGTCCCCGCGGTGTCGGTGCACAGAGATGAGCAGAATCTACTCTTGGTGCACACTCCCGACATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS GCA 90 bp | AGGACCACGCGGAGGACCCGTGGATTCTCAGGCATGTCGGGAGTGTaGACCAAGAGTAGATTCTGCTCATCTCTGTGCACCGACACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: RTTRRTRGFSGMSGV*TKSRFCSSLCTDTA Trigger: CGCGGTGTCGGTGCACAGAGATGAGCAGAATCTACTCTTGGTGCACACTCCCGACATGCCTGAGAATCCACGGGTCCTCCGCGTGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS TCA 90 bp | GATCTCCTGGAAGTAGGGCCAGCCAATTCTCTGAGGGTTCCTCACTaGGTGTGCATTTGGGCCCTCAGTTTCAGGGCCAGGGCAGTGGGT | + |
|
Preference number: 5 (lower is better) Translates to: DLLEVGPANSLRVPH*VCIWALSFRARAVG Trigger: ACCCACTGCCCTGGCCCTGAAACTGAGGGCCCAAATGCACACTCAGTGAGGAACCCTCAGAGAATTGGCTGGCCCTACTTCCAGGAGATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS CCA 90 bp | CTCACTGAGTGTGCATTTGGGCCCTCAGTTTCAGGGCCAGGGCAGTaGGTGCTGGAGCGTGAGCGCAAGGCCTGCTTGATATTAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTECAFGPSVSGPGQ*VLERERKACLILSF Trigger: GAAGCTTAATATCAAGCAGGCCTTGCGCTCACGCTCCAGCACCCACTGCCCTGGCCCTGAAACTGAGGGCCCAAATGCACACTCAGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS-3UTR CAA 90 bp | GTTGGGCAAGCACTGTGCAGACTCGGCAATGCCAGGCTGGCTGGCACAGGACCTTCACTAGCTCTCCACTaGGTCCTTCCTCCCATATCA | + |
|
Preference number: 5 (lower is better) Translates to: VGQALCRLGNARLAGTGPSLALH*VLPPIS Trigger: TGATATGGGAGGAAGGACCAAGTGGAGAGCTAGTGA...AGGTCCTGTGCCAGCCAGCCTGGCATTGCCGAGTCTGCACAGTGCTTGCCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | ACCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGACCGACCGACTAGGCCACGACTCCTGGTCCACTaGTCTGACACATCCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: TFTGPRASPPIDDRPTRPRLLVH*SDTSTR Trigger: TCTTGTGGATGTGTCAGACAAGTGGACCAGGAGTCG...TGGCCTAGTCGGTCGGTCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS GCA 90 bp | AACGTCACAGTGGAAGATGTCCATGAGGTCCCGGCCCACCTCCTGTaGAATCTGGGAGATCAAGAGGCCCTTCTGACCAATCAGGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: NVTVEDVHEVPAHLL*NLGDQEALLTNQDP Trigger: AGGATCCTGATTGGTCAGAAGGGCCTCTTGATCTCCCAGATTGCACAGGAGGTGGGCCGGGACCTCATGGACATCTTCCACTGTGACGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 90 bp | GCACTGCAGCACCTGGGGGTTGAGCCGACTCCTGGTCCACTTGTCTaGCACATCCACAAGAACTACAACAAGATCAGCAGATTCCATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALQHLGVEPTPGPLV*HIHKNYNKISRFHA Trigger: AGCATGGAATCTGCTGATCTTGTTGTAGTTCTTGTGGATGTGTCAGACAAGTGGACCAGGAGTCGGCTCAACCCCCAGGTGCTGCAGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 90 bp | TGCTTCAGGCAATCTACCTTGTTTAAGACGAGGATGCTAGGGACCTaGGAGAACTTGGTCAAGCACTGCAGCACCTGGGGGTTGAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: CFRQSTLFKTRMLGT*ENLVKHCSTWGLSR Trigger: TCGGCTCAACCCCCAGGTGCTGCAGTGCTTGACCAAGTTCTCTCAGGTCCCTAGCATCCTCGTCTTAAACAAGGTAGATTGCCTGAAGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 90 bp | AAGAGCTTCTCTCTGATTTTATTGGCACAGATCTCTTCGGGTGTCTaGCTAGTGAGCACACCACTGTGGAACTCCCAGGGTCCTGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KSFSLILLAQISSGV*LVSTPLWNSQGPGW Trigger: CCAGCCAGGACCCTGGGAGTTCCACAGTGGTGTGCTCACTAGCCAGACACCCGAAGAGATCTGTGCCAATAAAATCAGAGAGAAGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS TCA 90 bp | GTGTGCACCTTCTTTGAAACAGGAAACACTTTACGGCCCAGCAGCTaGTTGGAAAGTGTTGACTTCCCTGCATTTGGGGCTCCCAGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCTFFETGNTLRPSS*LESVDFPAFGAPRR Trigger: CCTCCTGGGAGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAAAGAAGGTGCACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS GCA 90 bp | ACACCTTCAGTGAGGGCTGCTGTCAGCTCCAGGAGAACTGACTTCTaGTTCAGGCAATCTACCTTGTTTAAGACGAGGATGCTAGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: TPSVRAAVSSRRTDF*FRQSTLFKTRMLGT Trigger: GGTCCCTAGCATCCTCGTCTTAAACAAGGTAGATTGCCTGAAGCAGAAGTCAGTTCTCCTGGAGCTGACAGCAGCCCTCACTGAAGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 90 bp | GCACCTTCTTTGAAACAGGAAACACTTTACGGCCCAGCAGCTGATTaGAAAGTGTTGACTTCCCTGCATTTGGGGCTCCCAGGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: APSLKQETLYGPAAD*KVLTSLHLGLPGGP Trigger: TGGTCCTCCTGGGAGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAAAGAAGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | GTAGTTCTAGTCAGTGACTCTGCCAGCAGCTTGAGCAGGGATCCACTGGGAGAAGCTGATTGGAAAGTGTaGACTTCCCTGCATTTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VVLVSDSASSLSRDPLGEADWKV*TSLHLG Trigger: CCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGC...TTCTCCCAGTGGATCCCTGCTCAAGCTGCTGGCAGAGTCACTGACTAGAACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 90 bp | TGTGATGACCCCCAGAGCTTGACATCGAGTGGTGTGCACCTTCTTTaGAACAGGAAACACTTTACGGCCCAGCAGCTGATTGGAAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CDDPQSLTSSGVHLL*NRKHFTAQQLIGKC Trigger: ACACTTTCCAATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAAAGAAGGTGCACACCACTCGATGTCAAGCTCTGGGGGTCATCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 90 bp | TCAAGAGGCCCTTCTGACCAATCAGGATCCTCACATGAGATTCTTTaGGCACCAGAAGGTTCTGTTGGATCACTAGCTCTCCACTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGPSDQSGSSHEIL*APEGSVGSLALHLV Trigger: GACCAAGTGGAGAGCTAGTGATCCAACAGAACCTTCTGGTGCCCAAAGAATCTCATGTGAGGATCCTGATTGGTCAGAAGGGCCTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | CAACTTCAAGGTGAGGAACTTGGGGGAGAAGAGAAAAATTGTGTTCCTACCAACGATGACCCCCAGAGCTaGACATCGAGTGGTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QLQGEELGGEEKNCVPTNDDPQS*TSSGVH Trigger: GTGCACACCACTCGATGTCAAGCTCTGGGGGTCATC...GTTGGTAGGAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | TCCTTATGCAACTTCAAGGTGAGGAACTTGGGGGAGAAGAGAAAAATTGTGTTCTTGACTTCCCTGCATTaGGGGCTCCCAGGAGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLCNFKVRNLGEKRKIVFLTSLH*GLPGGP Trigger: TGGTCCTCCTGGGAGCCCCAAATGCAGGGAAGTCAA...GAACACAATTTTTCTCTTCTCCCCCAAGTTCCTCACCTTGAAGTTGCATAAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 90 bp | AGCAGAATCACTTGGGTCTCCTTCTCTGTGATGACCCCCAGAGCTTaGCATCGAGTGGTGTGCACCTTCTTTGAAACAGGAAACACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SRITWVSFSVMTPRA*HRVVCTFFETGNTL Trigger: TAAAGTGTTTCCTGTTTCAAAGAAGGTGCACACCACTCGATGTCAAGCTCTGGGGGTCATCACAGAGAAGGAGACCCAAGTGATTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 90 bp | ATCCACAAGAACTACAACAAGATCAGCAGATTCCATGCTCGTCCATaGATCTTCCAGCAAAGAGCGCTCCAGATGGTGCCTCTTCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHKNYNKISRFHARP*IFQQRALQMVPLLF Trigger: AAACAGAAGAGGCACCATCTGGAGCGCTCTTTGCTGGAAGATCCATGGACGAGCATGGAATCTGCTGATCTTGTTGTAGTTCTTGTGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | CTATGGGTCCCTCACAATGGAAACCAGTCAGTGTCCATGGCCCTTCCCAGTCCTTTGATATTAAGCTTCTaGCCATTGACAACACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LWVPHNGNQSVSMALPSPLILSF*PLTTPS Trigger: TGAAGGTGTTGTCAATGGCAAGAAGCTTAATATCAA...AGGACTGGGAAGGGCCATGGACACTGACTGGTTTCCATTGTGAGGGACCCATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | TGGGAGGACCTTTGTGAGTTTAAAGCTAGCCTGATCTATGTAGAGATAGCCAGCGAGCGCAAGGCCTGCTaGATATTAAGCTTCTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: WEDLCEFKASLIYVEIASERKAC*ILSFLP Trigger: TGGCAAGAAGCTTAATATCAAGCAGGCCTTGCGCTC...GCTGGCTATCTCTACATAGATCAGGCTAGCTTTAAACTCACAAAGGTCCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | AATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGGTTCCAATGCGTCAAGCAGAATCACTaGGGTCTCCTTCTCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: NCVPTNNWKLRARVWFQCVKQNH*GLLLCD Trigger: ATCACAGAGAAGGAGACCCAAGTGATTCTGCTTGAC...GCATTGGAACCAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 90 bp | ATTGCTTCAATGTGTTCACATCCTTGTTGTTTAGTGCTGATAACATaGAGATCTCCTGGAAGTAGGGCCAGCCAATTCTCTGAGGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IASMCSHPCCLVLIT*RSPGSRASQFSEGS Trigger: GGAACCCTCAGAGAATTGGCTGGCCCTACTTCCAGGAGATCTTCATGTTATCAGCACTAAACAACAAGGATGTGAACACATTGAAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | TGGGAGGACCTTTGTGAGTTTAAAGCTAGCCTGATCTATGTAGAGATAGCCAGCTGGTGTGCACCTTCTTaGAAACAGGAAACACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: WEDLCEFKASLIYVEIASWCAPS*KQETLY Trigger: GTAAAGTGTTTCCTGTTTCAAAGAAGGTGCACACCA...GCTGGCTATCTCTACATAGATCAGGCTAGCTTTAAACTCACAAAGGTCCTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGTTAAGCTTCTTGCCATaGACAACACCTTCAGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RREKLCSYQQLETQGKSLLSFLP*TTPSVR Trigger: CCTCACTGAAGGTGTTGTCAATGGCAAGAAGCTTAA...CAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAAAAATTGTGTTCCTACCAACAACTGGAAACTCAGGGCAAGAGTTTGTTCTCTCTGATTTTATaGGCACAGATCTCTTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RREKLCSYQQLETQGKSLFSLIL*AQISSG Trigger: ACCCGAAGAGATCTGTGCCAATAAAATCAGAGAGAA...CAAACTCTTGCCCTGAGTTTCCAGTTGTTGGTAGGAACACAATTTTTCTCTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 72 bp | ATTTGGGGCTCCCAGGAGGACCACGCGGAGGACCCGTaGATTCTCAGGCATGTCGGGAGTGTGCACCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IWGSQEDHAEDP*ILRHVGSVHQE Trigger: CTCTTGGTGCACACTCCCGACATGCCTGAGAATCCACGGGTCCTCCGCGTGGTCCTCCTGGGAGCCCCAAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 72 bp | AAAGTGGAGCCCACGACACAGGACACGCACCTCGCCTaGTTACCTAGAAGACAGCCGGGCGGAGCAAGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: KVEPTTQDTHLA*LPRRQPGGASH Trigger: ATGGCTTGCTCCGCCCGGCTGTCTTCTAGGTAACCAGGCGAGGTGCGTGTCCTGTGTCGTGGGCTCCACTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS CCA 72 bp | TGTGCATTTGGGCCCTCAGTTTCAGGGCCAGGGCAGTaGGTGCTGGAGCGTGAGCGCAAGGCCTGCTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: CAFGPSVSGPGQ*VLERERKACLI Trigger: TATCAAGCAGGCCTTGCGCTCACGCTCCAGCACCCACTGCCCTGGCCCTGAAACTGAGGGCCCAAATGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS CAA 72 bp | CCAGCAGCTGATTGGAAAGTGTTGACTTCCCTGCATTaGGGGCTCCCAGGAGGACCACGCGGAGGACCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PAADWKVLTSLH*GLPGGPRGGPV Trigger: CACGGGTCCTCCGCGTGGTCCTCCTGGGAGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS TCA 72 bp | ACCGCGGGGACGCTCGGAACCAACGAACTGTCAGGCTaGGAAAATCCAAGGATACGGTCCAAGGCGGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: TAGTLGTNELSG*ENPRIRSKAES Trigger: GGACTCCGCCTTGGACCGTATCCTTGGATTTTCTCAGCCTGACAGTTCGTTGGTTCCGAGCGTCCCCGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS GCA 72 bp | TCAGGCATGTCGGGAGTGTGCACCAAGAGTAGATTCTaGTCATCTCTGTGCACCGACACCGCGGGGACGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SGMSGVCTKSRF*SSLCTDTAGTL Trigger: GAGCGTCCCCGCGGTGTCGGTGCACAGAGATGAGCAGAATCTACTCTTGGTGCACACTCCCGACATGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS CAA 90 bp | CTTTACGGCCCAGCAGCTGATTGGAAAGTGTTGACTTCCCTGCATTaGGGGCTCCCAGGAGGACCACGCGGAGGACCCGTGGATTCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: LYGPAADWKVLTSLH*GLPGGPRGGPVDSQ Trigger: CTGAGAATCCACGGGTCCTCCGCGTGGTCCTCCTGGGAGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS CAA 72 bp | AGCCAATTCTCTGAGGGTTCCTCACTGAGTGTGCATTaGGGCCCTCAGTTTCAGGGCCAGGGCAGTGGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: SQFSEGSSLSVH*GPQFQGQGSGC Trigger: GCACCCACTGCCCTGGCCCTGAAACTGAGGGCCCAAATGCACACTCAGTGAGGAACCCTCAGAGAATTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS TCA 72 bp | GAAGTAGGGCCAGCCAATTCTCTGAGGGTTCCTCACTaGGTGTGCATTTGGGCCCTCAGTTTCAGGGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: EVGPANSLRVPH*VCIWALSFRAR Trigger: CCTGGCCCTGAAACTGAGGGCCCAAATGCACACTCAGTGAGGAACCCTCAGAGAATTGGCTGGCCCTACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS GCA 72 bp | CGGAGGACCCGTGGATTCTCAGGCATGTCGGGAGTGTaGACCAAGAGTAGATTCTGCTCATCTCTGTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RRTRGFSGMSGV*TKSRFCSSLCT Trigger: GGTGCACAGAGATGAGCAGAATCTACTCTTGGTGCACACTCCCGACATGCCTGAGAATCCACGGGTCCTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS GCA 72 bp | GTGGAAGATGTCCATGAGGTCCCGGCCCACCTCCTGTaGAATCTGGGAGATCAAGAGGCCCTTCTGACCAAT | + |
|
Preference number: 6 (lower is better) Translates to: VEDVHEVPAHLL*NLGDQEALLTN Trigger: ATTGGTCAGAAGGGCCTCTTGATCTCCCAGATTGCACAGGAGGTGGGCCGGGACCTCATGGACATCTTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
||
| CDS CCA 72 bp | AGGAGTTTCACAGAGAGGCGGATGAGAACGTCACAGTaGAAGATGTCCATGAGGTCCCGGCCCACCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: RSFTERRMRTSQ*KMSMRSRPTSC Trigger: ACAGGAGGTGGGCCGGGACCTCATGGACATCTTCCACTGTGACGTTCTCATCCGCCTCTCTGTGAAACTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 90 bp | TGGGTGCTGGAGCGTGAGCGCAAGGCCTGCTTGATATTAAGCTTCTaGCCATTGACAACACCTTCAGTGAGGGCTGCTGTCAGCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: WVLERERKACLILSF*PLTTPSVRAAVSSR Trigger: CCTGGAGCTGACAGCAGCCCTCACTGAAGGTGTTGTCAATGGCAAGAAGCTTAATATCAAGCAGGCCTTGCGCTCACGCTCCAGCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS GCA 72 bp | CCAGGGCAGTGGGTGCTGGAGCGTGAGCGCAAGGCCTaGTTGATATTAAGCTTCTTGCCATTGACAACACCT | + |
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Preference number: 6 (lower is better) Translates to: PGQWVLERERKA*LILSFLPLTTP Trigger: AGGTGTTGTCAATGGCAAGAAGCTTAATATCAAGCAGGCCTTGCGCTCACGCTCCAGCACCCACTGCCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 90 bp | TTGAAACAGGAAACACTTTACGGCCCAGCAGCTGATTGGAAAGTGTaGACTTCCCTGCATTTGGGGCTCCCAGGAGGACCACGCGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: LKQETLYGPAADWKV*TSLHLGLPGGPRGG Trigger: TCCTCCGCGTGGTCCTCCTGGGAGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | GGGCAGTGGGTGCTGGAGCGTGAGCGCAAGGCCTGCTaGATATTAAGCTTCTTGCCATTGACAACACCTTCA | + |
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Preference number: 6 (lower is better) Translates to: GQWVLERERKAC*ILSFLPLTTPS Trigger: TGAAGGTGTTGTCAATGGCAAGAAGCTTAATATCAAGCAGGCCTTGCGCTCACGCTCCAGCACCCACTGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 90 bp | GTCAAGCACTGCAGCACCTGGGGGTTGAGCCGACTCCTGGTCCACTaGTCTGACACATCCACAAGAACTACAACAAGATCAGCAGATTCC | + |
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Preference number: 6 (lower is better) Translates to: VKHCSTWGLSRLLVH*SDTSTRTTTRSADS Trigger: GGAATCTGCTGATCTTGTTGTAGTTCTTGTGGATGTGTCAGACAAGTGGACCAGGAGTCGGCTCAACCCCCAGGTGCTGCAGTGCTTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 72 bp | CACCTGGGGGTTGAGCCGACTCCTGGTCCACTTGTCTaGCACATCCACAAGAACTACAACAAGATCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: HLGVEPTPGPLV*HIHKNYNKISR Trigger: TCTGCTGATCTTGTTGTAGTTCTTGTGGATGTGTCAGACAAGTGGACCAGGAGTCGGCTCAACCCCCAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | CCCCCAGAGCTTGACATCGAGTGGTGTGCACCTTCTTaGAAACAGGAAACACTTTACGGCCCAGCAGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: PPELDIEWCAPS*KQETLYGPAAD Trigger: ATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAAAGAAGGTGCACACCACTCGATGTCAAGCTCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | TGCAGCACCTGGGGGTTGAGCCGACTCCTGGTCCACTaGTCTGACACATCCACAAGAACTACAACAAGATCA | + |
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Preference number: 6 (lower is better) Translates to: CSTWGLSRLLVH*SDTSTRTTTRS Trigger: TGATCTTGTTGTAGTTCTTGTGGATGTGTCAGACAAGTGGACCAGGAGTCGGCTCAACCCCCAGGTGCTGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | GAGCGTGAGCGCAAGGCCTGCTTGATATTAAGCTTCTaGCCATTGACAACACCTTCAGTGAGGGCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: ERERKACLILSF*PLTTPSVRAAV Trigger: GACAGCAGCCCTCACTGAAGGTGTTGTCAATGGCAAGAAGCTTAATATCAAGCAGGCCTTGCGCTCACGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 90 bp | ATTCTTTGGGCACCAGAAGGTTCTGTTGGATCACTAGCTCTCCACTaGGTCCTTCCTCCCATATCACTGTCTTCTGCTGCACACCGTAGG | + |
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Preference number: 6 (lower is better) Translates to: ILWAPEGSVGSLALH*VLPPISLSSAAHRR Trigger: CCTACGGTGTGCAGCAGAAGACAGTGATATGGGAGGAAGGACCAAGTGGAGAGCTAGTGATCCAACAGAACCTTCTGGTGCCCAAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 72 bp | CCCCAGAGCTTGACATCGAGTGGTGTGCACCTTCTTTaGAACAGGAAACACTTTACGGCCCAGCAGCTGATT | + |
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Preference number: 6 (lower is better) Translates to: PQSLTSSGVHLL*NRKHFTAQQLI Trigger: AATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAAAGAAGGTGCACACCACTCGATGTCAAGCTCTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 72 bp | GCACCTCCTCAGGCAGGTACTCTAAGAGCTTCTCTCTaGTTTTATTGGCACAGATCTCTTCGGGTGTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: APPQAGTLRASL*FYWHRSLRVSG Trigger: GCCAGACACCCGAAGAGATCTGTGCCAATAAAATCAGAGAGAAGCTCTTAGAGTACCTGCCTGAGGAGGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS GCA 72 bp | GTGAGGGCTGCTGTCAGCTCCAGGAGAACTGACTTCTaGTTCAGGCAATCTACCTTGTTTAAGACGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: VRAAVSSRRTDF*FRQSTLFKTRM Trigger: CATCCTCGTCTTAAACAAGGTAGATTGCCTGAAGCAGAAGTCAGTTCTCCTGGAGCTGACAGCAGCCCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 72 bp | TCTCTGATTTTATTGGCACAGATCTCTTCGGGTGTCTaGCTAGTGAGCACACCACTGTGGAACTCCCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: SLILLAQISSGV*LVSTPLWNSQG Trigger: ACCCTGGGAGTTCCACAGTGGTGTGCTCACTAGCCAGACACCCGAAGAGATCTGTGCCAATAAAATCAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | GCACCAGAAGGTTCTGTTGGATCACTAGCTCTCCACTaGGTCCTTCCTCCCATATCACTGTCTTCTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: APEGSVGSLALH*VLPPISLSSAA Trigger: TGCAGCAGAAGACAGTGATATGGGAGGAAGGACCAAGTGGAGAGCTAGTGATCCAACAGAACCTTCTGGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 72 bp | TTGAAACAGGAAACACTTTACGGCCCAGCAGCTGATTaGAAAGTGTTGACTTCCCTGCATTTGGGGCTCCCA | + |
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Preference number: 6 (lower is better) Translates to: LKQETLYGPAAD*KVLTSLHLGLP Trigger: TGGGAGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 72 bp | AACTACAACAAGATCAGCAGATTCCATGCTCGTCCATaGATCTTCCAGCAAAGAGCGCTCCAGATGGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: NYNKISRFHARP*IFQQRALQMVP Trigger: AGGCACCATCTGGAGCGCTCTTTGCTGGAAGATCCATGGACGAGCATGGAATCTGCTGATCTTGTTGTAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS GCA 72 bp | CATCCACAAGAACTACAACAAGATCAGCAGATTCCATaGTCGTCCATGGATCTTCCAGCAAAGAGCGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HPQELQQDQQIP*SSMDLPAKSAP Trigger: TGGAGCGCTCTTTGCTGGAAGATCCATGGACGAGCATGGAATCTGCTGATCTTGTTGTAGTTCTTGTGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CCA 72 bp | CCTTCTGACCAATCAGGATCCTCACATGAGATTCTTTaGGCACCAGAAGGTTCTGTTGGATCACTAGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: PSDQSGSSHEIL*APEGSVGSLAL Trigger: GAGAGCTAGTGATCCAACAGAACCTTCTGGTGCCCAAAGAATCTCATGTGAGGATCCTGATTGGTCAGAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS TCA 72 bp | TTCTTTGAAACAGGAAACACTTTACGGCCCAGCAGCTaGTTGGAAAGTGTTGACTTCCCTGCATTTGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: FFETGNTLRPSS*LESVDFPAFGA Trigger: AGCCCCAAATGCAGGGAAGTCAACACTTTCCAATCAGCTGCTGGGCCGTAAAGTGTTTCCTGTTTCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | GTCAGAAGGTATTGCTTCAATGTGTTCACATCCTTGTaGTTTAGTGCTGATAACATGAAGATCTCCTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VRRYCFNVFTSL*FSADNMKISWK Trigger: CTTCCAGGAGATCTTCATGTTATCAGCACTAAACAACAAGGATGTGAACACATTGAAGCAATACCTTCTGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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| CDS CAA 72 bp | TGTGTCAGAAGGTATTGCTTCAATGTGTTCACATCCTaGTTGTTTAGTGCTGATAACATGAAGATCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: CVRRYCFNVFTS*LFSADNMKISW Trigger: CCAGGAGATCTTCATGTTATCAGCACTAAACAACAAGGATGTGAACACATTGAAGCAATACCTTCTGACACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021183.4 |
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