Pregenerated sensors for EPYC (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019936Ensembl transcript IDs: ENSMUST00000020094.8, ENSMUST00000105285.4
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAAAGGCCATATTCACATATCCATGGAATGGAATGACTTCAGAATaGCAGAAGTTGTACTCATGTGTAAATGTCCCCAGGGAATGTTTA | + |
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Preference number: 1 (lower is better) Translates to: VKAIFTYPWNGMTSE*QKLYSCVNVPRECL Trigger: TAAACATTCCCTGGGGACATTTACACATGAGTACAACTTCTGGCATTCTGAAGTCATTCCATTCCATGGATATGTGAATATGGCCTTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| 3UTR CCA 90 bp | GAAATTTTGACAGTTTTTGGTGTAAAGGCCATATTCACATATCCATaGAATGGAATGACTTCAGAATGCCAGAAGTTGTACTCATGTGTA | + |
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Preference number: 1 (lower is better) Translates to: EILTVFGVKAIFTYP*NGMTSECQKLYSCV Trigger: TACACATGAGTACAACTTCTGGCATTCTGAAGTCATTCCATTCCATGGATATGTGAATATGGCCTTTACACCAAAAACTGTCAAAATTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| 3UTR CAA 90 bp | TATCATTGTGCCACATGTTTTAAACGCATCTCAAATATACTGAGTTaGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: YHCATCFKRISNILS*LLKRYMLLLATESI Trigger: GATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGCACAATGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| 3UTR CAA 90 bp | ATATTCACATATCCATGGAATGGAATGACTTCAGAATGCCAGAAGTaGTACTCATGTGTAAATGTCCCCAGGGAATGTTTAGAAATTATA | + |
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Preference number: 2 (lower is better) Translates to: IFTYPWNGMTSECQK*YSCVNVPRECLEII Trigger: TATAATTTCTAAACATTCCCTGGGGACATTTACACATGAGTACAACTTCTGGCATTCTGAAGTCATTCCATTCCATGGATATGTGAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| 3UTR-3UTR CAA 90 bp | AAGGTTTTTCAATACAGTTGTAGAGTAAATCACTGTGTTGAACTTGGGGTCTTAAGATATATGCTTCTCTaGGCTACAGAAAGCATCACA | + |
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Preference number: 3 (lower is better) Translates to: KVFQYSCRVNHCVELGVLRYMLL*ATESIT Trigger: TGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCT...TAAGACCCCAAGTTCAACACAGTGATTTACTCTACAACTGTATTGAAAAACCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCAAGCCCCGGGAATTCTaGCTCCTGTGGGGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: EEIYASLGYRKHHNSDICKPREF*LLWGRA Trigger: GGCTCTTCCCCACAGGAGCCAGAATTCCCGGGGCTT...GCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | ATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAAAGCCCCGGGAATTCTaGCTCCTGTGGGGAAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ISNILSLLLKRYMLLLATKPREF*LLWGRA Trigger: GGCTCTTCCCCACAGGAGCCAGAATTCCCGGGGCTT...TGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | AAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCCGAATTCTGGCTCCTGTaGGGAAGAGCCATCGATCAG | + |
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Preference number: 4 (lower is better) Translates to: KRYMLLLATESITILIFAEFWLL*GRAIDQ Trigger: CTGATCGATGGCTCTTCCCCACAGGAGCCAGAATTC...GGCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATTTGGAAAGTCTTCGTTaGTGTGTGGACCCAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ASEEIYASLGYRKHHNSDLESLR*CVDPEA Trigger: GGCTTCTGGGTCCACACACCAACGAAGACTTTCCAA...ATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR GCA 90 bp | TTCAGAATGCCAGAAGTTGTACTCATGTGTAAATGTCCCCAGGGAATGTTTAGAAGGCAGCTTTCGGAATaGATCTTCATCAATCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: FRMPEVVLMCKCPQGMFRRQLSE*IFINLR Trigger: TCGGAGATTGATGAAGATGCATTCCGAAAGCTGCCT...TCTAAACATTCCCTGGGGACATTTACACATGAGTACAACTTCTGGCATTCTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATAAAGAGCTCTGTAGTTaGTGCAGCCAATACAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ASEEIYASLGYRKHHNSDKELCS*CSQYSI Trigger: GATGCTGTATTGGCTGCACCAACTACAGAGCTCTTT...ATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | ATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACATTGGAAAGTCTTCGTTaGTGTGTGGACCCAGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: ISNILSLLLKRYMLLLATLESLR*CVDPEA Trigger: GGCTTCTGGGTCCACACACCAACGAAGACTTTCCAA...TGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | TTCAGAATGCCAGAAGTTGTACTCATGTGTAAATGTCCCCAGGGAATGTTTAGAATAGCGTCCAGTTCATaGTCATCACAGTATACAGTG | + |
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Preference number: 4 (lower is better) Translates to: FRMPEVVLMCKCPQGMFRIASSS*SSQYTV Trigger: CACTGTATACTGTGATGACCATGAACTGGACGCTAT...TCTAAACATTCCCTGGGGACATTTACACATGAGTACAACTTCTGGCATTCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| CDS-3UTR TCA 90 bp | AAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCCCCAAGCTGTTATCGGTaGTATAGAGATGGTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: KRYMLLLATESITILIFAPSCYR*YRDGGD Trigger: ATCTCCACCATCTCTATATCACCGATAACAGCTTGG...GGCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GTACTCATGTGTAAATGTCCCCAGGGAATGTTTAGAAATTATACAAGCAAGGTTAAAGAGCTCTGTAGTTaGTGCAGCCAATACAGCATC | + |
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Preference number: 4 (lower is better) Translates to: VLMCKCPQGMFRNYTSKVKELCS*CSQYSI Trigger: GATGCTGTATTGGCTGCACCAACTACAGAGCTCTTT...AACCTTGCTTGTATAATTTCTAAACATTCCCTGGGGACATTTACACATGAGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | AAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCCACACAGGAGACAAGTTaGAAAGTCTTCGTTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KRYMLLLATESITILIFATQETS*KVFVGV Trigger: CACACCAACGAAGACTTTCCAACTTGTCTCCTGTGT...GGCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | AATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCACACAGGAGACAAGTTaGAAAGTCTTCGTTGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NILSLLLKRYMLLLATESTQETS*KVFVGV Trigger: CACACCAACGAAGACTTTCCAACTTGTCTCCTGTGT...GCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATAGCGTCCAGTTCATaGTCATCACAGTATACAGTG | + |
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Preference number: 4 (lower is better) Translates to: ASEEIYASLGYRKHHNSDIASSS*SSQYTV Trigger: CACTGTATACTGTGATGACCATGAACTGGACGCTAT...ATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR TCA 90 bp | AAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCCGGCATCATACACTTCTaGGTCATAGTTAAAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: KRYMLLLATESITILIFAGIIHF*VIVKEL Trigger: GAGCTCTTTAACTATGACTCAGAAGTGTATGATGCC...GGCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR TCA 90 bp | ACAGTTTTTGGTGTAAAGGCCATATTCACATATCCATGGAATGGAATGACTTCAGGCATCATACACTTCTaGGTCATAGTTAAAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TVFGVKAIFTYPWNGMTSGIIHF*VIVKEL Trigger: GAGCTCTTTAACTATGACTCAGAAGTGTATGATGCC...TGAAGTCATTCCATTCCATGGATATGTGAATATGGCCTTTACACCAAAAACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| CDS-3UTR TCA 90 bp | AAGGTTTTTCAATACAGTTGTAGAGTAAATCACTGTGTTGAACTTGGGGTCTTACCAAGCTGTTATCGGTaGTATAGAGATGGTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: KVFQYSCRVNHCVELGVLPSCYR*YRDGGD Trigger: ATCTCCACCATCTCTATATCACCGATAACAGCTTGG...TAAGACCCCAAGTTCAACACAGTGATTTACTCTACAACTGTATTGAAAAACCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000105285.4 |
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| CDS-3UTR GCA 90 bp | GCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATAGGCAGCTTTCGGAATaGATCTTCATCAATCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: ATCFKRISNILSLLLKRYRQLSE*IFINLR Trigger: TCGGAGATTGATGAAGATGCATTCCGAAAGCTGCCT...ATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCTTCTCGTTCTCTACATaGTTGTCAGGAATGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: EEIYASLGYRKHHNSDICFSFST*LSGMCS Trigger: TGAACACATTCCTGACAACCATGTAGAGAACGAGAA...GCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| 3UTR CAA 72 bp | GCCACATGTTTTAAACGCATCTCAAATATACTGAGTTaGCTTCTGAAGAGATATATGCTTCTCTTGGCTACA | + |
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Preference number: 4 (lower is better) Translates to: ATCFKRISNILS*LLKRYMLLLAT Trigger: TGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATTTCTCGTTCTCTACATaGTTGTCAGGAATGTGTTCA | + |
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Preference number: 4 (lower is better) Translates to: ATCFKRISNILSLLLKRYFSFST*LSGMCS Trigger: TGAACACATTCCTGACAACCATGTAGAGAACGAGAA...ATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATCATCACAGTATACAGTaGTACTTATACAAGTACACA | + |
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Preference number: 4 (lower is better) Translates to: ASEEIYASLGYRKHHNSDHHSIQ*YLYKYT Trigger: TGTGTACTTGTATAAGTACCACTGTATACTGTGATG...ATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | CATTGTGCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGAAATGTCAAAGTGTTTaGCAATTCTGGAAGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: HCATCFKRISNILSLLLKKCQSV*QFWKLL Trigger: AAGCAGCTTCCAGAATTGCCAAACACTTTGACATTT...CTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGCACAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR GCA 90 bp | CATTGTGCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGCAGAAAGTATCTTCATaGATCTCCAGAATGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: HCATCFKRISNILSLLLKQKVSS*ISRMSL Trigger: TAATGACATTCTGGAGATGCATGAAGATACTTTCTG...CTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGCACAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCCATCACAGTATACAGTaGTACTTATACAAGTACACA | + |
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Preference number: 4 (lower is better) Translates to: EEIYASLGYRKHHNSDICHHSIQ*YLYKYT Trigger: TGTGTACTTGTATAAGTACCACTGTATACTGTGATG...GCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CCA 90 bp | GCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATAAATGTCAAAGTGTTTaGCAATTCTGGAAGCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: ATCFKRISNILSLLLKRYKCQSV*QFWKLL Trigger: AAGCAGCTTCCAGAATTGCCAAACACTTTGACATTT...ATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR GCA 90 bp | GCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATCAGAAAGTATCTTCATaGATCTCCAGAATGTCATTA | + |
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Preference number: 4 (lower is better) Translates to: ATCFKRISNILSLLLKRYQKVSS*ISRMSL Trigger: TAATGACATTCTGGAGATGCATGAAGATACTTTCTG...ATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGC 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 90 bp | CCATCGATCAGCCTGGGAGTAGATTCTTCATCCTTGTCTTCATCCTaGTTGTCCCCTAGCTGTGGGCCTGGGGTCAGGAGCTCTCTGTTC | + |
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Preference number: 5 (lower is better) Translates to: PSISLGVDSSSLSSS*LSPSCGPGVRSSLF Trigger: GAACAGAGAGCTCCTGACCCCAGGCCCACAGCTAGGGGACAACCAGGATGAAGACAAGGATGAAGAATCTACTCCCAGGCTGATCGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 90 bp | TTCGTTGGTGTGTGGACCCAGAAGCCCCGGGAATTCTGGCTCCTGTaGGGAAGAGCCATCGATCAGCCTGGGAGTAGATTCTTCATCCTT | + |
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Preference number: 5 (lower is better) Translates to: FVGVWTQKPREFWLL*GRAIDQPGSRFFIL Trigger: AAGGATGAAGAATCTACTCCCAGGCTGATCGATGGCTCTTCCCCACAGGAGCCAGAATTCCCGGGGCTTCTGGGTCCACACACCAACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 90 bp | TATACAAGTACACAGGAGACAAGTTGGAAAGTCTTCGTTGGTGTGTaGACCCAGAAGCCCCGGGAATTCTGGCTCCTGTGGGGAAGAGCC | + |
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Preference number: 5 (lower is better) Translates to: YTSTQETSWKVFVGV*TQKPREFWLLWGRA Trigger: GGCTCTTCCCCACAGGAGCCAGAATTCCCGGGGCTTCTGGGTCCACACACCAACGAAGACTTTCCAACTTGTCTCCTGTGTACTTGTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 90 bp | TGGTACTTATACAAGTACACAGGAGACAAGTTGGAAAGTCTTCGTTaGTGTGTGGACCCAGAAGCCCCGGGAATTCTGGCTCCTGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: WYLYKYTGDKLESLR*CVDPEAPGILAPVG Trigger: CCCCACAGGAGCCAGAATTCCCGGGGCTTCTGGGTCCACACACCAACGAAGACTTTCCAACTTGTCTCCTGTGTACTTGTATAAGTACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS TCA 90 bp | CAGAAAGTATCTTCATGCATCTCCAGAATGTCATTATTCTGGAGGTaGAGAGCCCGCAGACTTTCTGGGAGTGGTAGAGGGATGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: QKVSSCISRMSLFWR*RARRLSGSGRGMWS Trigger: GGACCACATCCCTCTACCACTCCCAGAAAGTCTGCGGGCTCTTCACCTCCAGAATAATGACATTCTGGAGATGCATGAAGATACTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | GCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATTTGTCTTCATCCTGGTaGTCCCCTAGCTGTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: ASEEIYASLGYRKHHNSDLSSSW*SPSCGP Trigger: AGGCCCACAGCTAGGGGACAACCAGGATGAAGACAA...ATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | CATTGTGCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGACGCAGAACCAGCTCTaGGAGGTGAGGCAGCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: HCATCFKRISNILSLLLKTQNQL*EVRQLS Trigger: CGAAAGCTGCCTCACCTCCAAGAGCTGGTTCTGCGT...CTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGCACAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS TCA 90 bp | GTTATAAAAGGTCCCTGTGTCCTCCAAGATGGCATCATACACTTCTaGGTCATAGTTAAAGAGCTCTGTAGTTGGTGCAGCCAATACAGC | + |
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Preference number: 5 (lower is better) Translates to: VIKGPCVLQDGIIHF*VIVKELCSWCSQYS Trigger: GCTGTATTGGCTGCACCAACTACAGAGCTCTTTAACTATGACTCAGAAGTGTATGATGCCATCTTGGAGGACACAGGGACCTTTTATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS TCA 90 bp | GGAAGCTGCTTTATCTTATTGTCACGCAGAACCAGCTCTTGGAGGTaGGGCAGCTTTCGGAATGCATCTTCATCAATCTCCGATATTAAA | + |
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Preference number: 5 (lower is better) Translates to: GSCFILLSRRTSSWR*GSFRNASSSISDIK Trigger: TTTAATATCGGAGATTGATGAAGATGCATTCCGAAAGCTGCCTCACCTCCAAGAGCTGGTTCTGCGTGACAATAAGATAAAGCAGCTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | AATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCTTGTCTTCATCCTGGTaGTCCCCTAGCTGTGGGCCT | + |
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Preference number: 5 (lower is better) Translates to: NILSLLLKRYMLLLATESLSSSW*SPSCGP Trigger: AGGCCCACAGCTAGGGGACAACCAGGATGAAGACAA...GCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | ATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAACGCAGAACCAGCTCTaGGAGGTGAGGCAGCTTTCG | + |
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Preference number: 5 (lower is better) Translates to: ISNILSLLLKRYMLLLATTQNQL*EVRQLS Trigger: CGAAAGCTGCCTCACCTCCAAGAGCTGGTTCTGCGT...TGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | GAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCGGAGTTCTGCTGAGGTaGATAGGGTTTCCATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: EEIYASLGYRKHHNSDICGVLLR*IGFPSS Trigger: ACTGGATGGAAACCCTATCAACCTCAGCAGAACTCC...GCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | CATTGTGCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGGGAGTTCTGCTGAGGTaGATAGGGTTTCCATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: HCATCFKRISNILSLLLKGVLLR*IGFPSS Trigger: ACTGGATGGAAACCCTATCAACCTCAGCAGAACTCC...CTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGCACAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | GCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATGTAGATTCTTCATCCTaGTCTTCATCCTGGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ASEEIYASLGYRKHHNSDVDSSS*SSSWLS Trigger: GGACAACCAGGATGAAGACAAGGATGAAGAATCTAC...ATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | AAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCCAGCTGCTTTATCTTATaGTCACGCAGAACCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: KRYMLLLATESITILIFASCFIL*SRRTSS Trigger: AGAGCTGGTTCTGCGTGACAATAAGATAAAGCAGCT...GGCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | GAAGAGATATATGCTTCTCTTGGCTACAGAAAGCATCACAATTCTGATATTTGCAGCTGCTTTATCTTATaGTCACGCAGAACCAGCTCT | + |
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Preference number: 5 (lower is better) Translates to: EEIYASLGYRKHHNSDICSCFIL*SRRTSS Trigger: AGAGCTGGTTCTGCGTGACAATAAGATAAAGCAGCT...GCAAATATCAGAATTGTGATGCTTTCTGTAGCCAAGAGAAGCATATATCTCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 90 bp | TCTATTGTTGCTGATATCAATAAATGTCAAAGTGTTTGGCAATTCTaGAAGCTGCTTTATCTTATTGTCACGCAGAACCAGCTCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SIVADINKCQSVWQF*KLLYLIVTQNQLLE Trigger: CTCCAAGAGCTGGTTCTGCGTGACAATAAGATAAAGCAGCTTCCAGAATTGCCAAACACTTTGACATTTATTGATATCAGCAACAATAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | GCCACATGTTTTAAACGCATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATGTAGATTCTTCATCCTaGTCTTCATCCTGGTTGTCC | + |
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Preference number: 5 (lower is better) Translates to: ATCFKRISNILSLLLKRYVDSSS*SSSWLS Trigger: GGACAACCAGGATGAAGACAAGGATGAAGAATCTAC...ATATCTCTTCAGAAGCAAACTCAGTATATTTGAGATGCGTTTAAAACATGTGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | ATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAAAATATGTAGTCTTCTaGGGCAGTGGAGGAATAGCG | + |
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Preference number: 5 (lower is better) Translates to: ISNILSLLLKRYMLLLATKYVVF*GSGGIA Trigger: CGCTATTCCTCCACTGCCCAAGAAGACTACATATTT...TGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | AATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACAGAAAGCCTTCCCAGTCTATTGTaGCTGATATCAATAAATGTC | + |
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Preference number: 5 (lower is better) Translates to: NILSLLLKRYMLLLATESLPSLL*LISINV Trigger: GACATTTATTGATATCAGCAACAATAGACTGGGAAG...GCTTTCTGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS-3UTR CAA 90 bp | ATCTCAAATATACTGAGTTTGCTTCTGAAGAGATATATGCTTCTCTTGGCTACACTTCCCAGTCTATTGTaGCTGATATCAATAAATGTC | + |
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Preference number: 5 (lower is better) Translates to: ISNILSLLLKRYMLLLATLPSLL*LISINV Trigger: GACATTTATTGATATCAGCAACAATAGACTGGGAAG...TGTAGCCAAGAGAAGCATATATCTCTTCAGAAGCAAACTCAGTATATTTGAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 72 bp | AGCCTGGGAGTAGATTCTTCATCCTTGTCTTCATCCTaGTTGTCCCCTAGCTGTGGGCCTGGGGTCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: SLGVDSSSLSSS*LSPSCGPGVRS Trigger: GCTCCTGACCCCAGGCCCACAGCTAGGGGACAACCAGGATGAAGACAAGGATGAAGAATCTACTCCCAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 90 bp | TCGATCAGCCTGGGAGTAGATTCTTCATCCTTGTCTTCATCCTGGTaGTCCCCTAGCTGTGGGCCTGGGGTCAGGAGCTCTCTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: SISLGVDSSSLSSSW*SPSCGPGVRSSLFP Trigger: TGGGAACAGAGAGCTCCTGACCCCAGGCCCACAGCTAGGGGACAACCAGGATGAAGACAAGGATGAAGAATCTACTCCCAGGCTGATCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 72 bp | ACACAGGAGACAAGTTGGAAAGTCTTCGTTGGTGTGTaGACCCAGAAGCCCCGGGAATTCTGGCTCCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: TQETSWKVFVGV*TQKPREFWLLW Trigger: CCACAGGAGCCAGAATTCCCGGGGCTTCTGGGTCCACACACCAACGAAGACTTTCCAACTTGTCTCCTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 90 bp | GTGGTACTTATACAAGTACACAGGAGACAAGTTGGAAAGTCTTCGTaGGTGTGTGGACCCAGAAGCCCCGGGAATTCTGGCTCCTGTGGG | + |
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Preference number: 6 (lower is better) Translates to: VVLIQVHRRQVGKSS*VCGPRSPGNSGSCG Trigger: CCCACAGGAGCCAGAATTCCCGGGGCTTCTGGGTCCACACACCAACGAAGACTTTCCAACTTGTCTCCTGTGTACTTGTATAAGTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS TCA 72 bp | GGTCCCTGTGTCCTCCAAGATGGCATCATACACTTCTaGGTCATAGTTAAAGAGCTCTGTAGTTGGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: GPCVLQDGIIHF*VIVKELCSWCS Trigger: GCTGCACCAACTACAGAGCTCTTTAACTATGACTCAGAAGTGTATGATGCCATCTTGGAGGACACAGGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 90 bp | CAATTCTGGAAGCTGCTTTATCTTATTGTCACGCAGAACCAGCTCTaGGAGGTGAGGCAGCTTTCGGAATGCATCTTCATCAATCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: QFWKLLYLIVTQNQL*EVRQLSECIFINLR Trigger: TCGGAGATTGATGAAGATGCATTCCGAAAGCTGCCTCACCTCCAAGAGCTGGTTCTGCGTGACAATAAGATAAAGCAGCTTCCAGAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 72 bp | AAGCTGCTTTATCTTATTGTCACGCAGAACCAGCTCTaGGAGGTGAGGCAGCTTTCGGAATGCATCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: KLLYLIVTQNQL*EVRQLSECIFI Trigger: GATGAAGATGCATTCCGAAAGCTGCCTCACCTCCAAGAGCTGGTTCTGCGTGACAATAAGATAAAGCAGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS TCA 72 bp | TTTATCTTATTGTCACGCAGAACCAGCTCTTGGAGGTaGGGCAGCTTTCGGAATGCATCTTCATCAATCTCC | + |
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Preference number: 6 (lower is better) Translates to: FILLSRRTSSWR*GSFRNASSSIS Trigger: GGAGATTGATGAAGATGCATTCCGAAAGCTGCCTCACCTCCAAGAGCTGGTTCTGCGTGACAATAAGATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CCA 72 bp | GTCTTCTTGGGCAGTGGAGGAATAGCGTCCAGTTCATaGTCATCACAGTATACAGTGGTACTTATACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: VFLGSGGIASSS*SSQYTVVLIQV Trigger: TACTTGTATAAGTACCACTGTATACTGTGATGACCATGAACTGGACGCTATTCCTCCACTGCCCAAGAAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 90 bp | GAGGCAGCTTTCGGAATGCATCTTCATCAATCTCCGATATTAAATTaGATGTCAGATCGATCCTTTTTAAATCATTTAAGCTTGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: EAAFGMHLHQSPILN*MSDRSFLNHLSLQS Trigger: ACTTTGCAAGCTTAAATGATTTAAAAAGGATCGATCTGACATCAAATTTAATATCGGAGATTGATGAAGATGCATTCCGAAAGCTGCCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 72 bp | GCTTCTTGTTTAATGCCTTTTCTTCCCAGTCTATTGTaGCTGATATCAATAAATGTCAAAGTGTTTGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ASCLMPFLPSLL*LISINVKVFGN Trigger: ATTGCCAAACACTTTGACATTTATTGATATCAGCAACAATAGACTGGGAAGAAAAGGCATTAAACAAGAAGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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| CDS CAA 72 bp | AAAGCTTCTTGTTTAATGCCTTTTCTTCCCAGTCTATaGTTGCTGATATCAATAAATGTCAAAGTGTTTGGC | + |
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Preference number: 6 (lower is better) Translates to: KASCLMPFLPSL*LLISINVKVFG Trigger: GCCAAACACTTTGACATTTATTGATATCAGCAACAATAGACTGGGAAGAAAAGGCATTAAACAAGAAGCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020094.8 ENSMUST00000105285.4 |
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