Pregenerated sensors for EPRS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026615Ensembl transcript IDs: ENSMUST00000046514.13, ENSMUST00000191900.6, ENSMUST00000195824.2
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTCTGTCCTCTGTTCACGTTCCGCCTTCATCTGTTCTGCAGGAGTGTCATCCACCAACATCTTCCAAGATaGCCCACTAGCCTCTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: FCPLFTFRLHLFCRSVIHQHLPR*PTSLWG Trigger: CCCCCAGAGGCTAGTGGGTCATCTTGGAAGATGTTG...GTGGATGACACTCCTGCAGAACAGATGAAGGCGGAACGTGAACAGAGGACAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTCCCTTTAAAGTTAACCTGGTAGTGCTGGTTCAGAAGAGCAGCTTTCGCTCCCATCTCTGCACCTaGAAGCTCCACGAATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: QFPFKVNLVVLVQKSSFRSHLCT*KLHEFP Trigger: GGGAAATTCGTGGAGCTTCCAGGTGCAGAGATGGGA...GCGAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTTAAAGGGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195824.2 |
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| 3UTR-3UTR CCA 90 bp | TCTTCCCACATCTGTAGATTCTTCTCAACAGAGTTCTTCCTGTGTTTGGATTCTTCCCATCTCTGCACCTaGAAGCTCCACGAATTTCCC | + |
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Preference number: 2 (lower is better) Translates to: SSHICRFFSTEFFLCLDSSHLCT*KLHEFP Trigger: GGGAAATTCGTGGAGCTTCCAGGTGCAGAGATGGGA...AGAATCCAAACACAGGAAGAACTCTGTTGAGAAGAATCTACAGATGTGGGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| 3UTR-3UTR GCA 90 bp | GTGTTTGGATTCTGTCCTCTGTTCACGTTCCGCCTTCATCTGTTCTGCAGGAGTTTTAATATGCAGCATTaGAACATCTTCCAAGATGAC | + |
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Preference number: 2 (lower is better) Translates to: VFGFCPLFTFRLHLFCRSFNMQH*NIFQDD Trigger: GTCATCTTGGAAGATGTTGCAATGCTGCATATTAAA...ACTCCTGCAGAACAGATGAAGGCGGAACGTGAACAGAGGACAGAATCCAAACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| 3UTR-3UTR CCA 90 bp | TGTTTGGATTCTGTCCTCTGTTCACGTTCCGCCTTCATCTGTTCTGCAGGAGTGGTAAGTAAACTGATCTaGTTTAATATGCAGCATTGC | + |
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Preference number: 2 (lower is better) Translates to: CLDSVLCSRSAFICSAGVVSKLI*FNMQHC Trigger: GCAATGCTGCATATTAAACCAGATCAGTTTACTTAC...CACTCCTGCAGAACAGATGAAGGCGGAACGTGAACAGAGGACAGAATCCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| 3UTR GCA 72 bp | TTCTGTCCTCTGTTCACGTTCCGCCTTCATCTGTTCTaGAGGAGTGTCATCCACATAAGCCTTCCCTTCTTG | + |
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Preference number: 3 (lower is better) Translates to: FCPLFTFRLHLF*RSVIHISLPFL Trigger: CAAGAAGGGAAGGCTTATGTGGATGACACTCCTGCAGAACAGATGAAGGCGGAACGTGAACAGAGGACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| 3UTR CCA 72 bp | TCTGTAGATTCTTCTCAACAGAGTTCTTCCTGTGTTTaGATTCTGTCCTCTGTTCACGTTCCGCCTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: SVDSSQQSSSCV*ILSSVHVPPSS Trigger: AGATGAAGGCGGAACGTGAACAGAGGACAGAATCCAAACACAGGAAGAACTCTGTTGAGAAGAATCTACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR GCA 90 bp | TTCCGCCTTCATCTGTTCTGCAGGAGTGTCATCCACATAAGCCTTCCCTTCTTGCAGCCCAGACGTAGTTaGAATTCTAGCCAGGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: FRLHLFCRSVIHISLPFLQPRRS*NSSQVA Trigger: CGCTACCTGGCTAGAATTGCAACTACGTCTGGGCTG...CAAGAAGGGAAGGCTTATGTGGATGACACTCCTGCAGAACAGATGAAGGCGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR GCA 90 bp | AAAGTTAACCTGGTAGTGCTGGTTCAGAAGAGCAGCTTTCGCATGCCCAATGTGCAGCCCAGACGTAGTTaGAATTCTAGCCAGGTAGCG | + |
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Preference number: 4 (lower is better) Translates to: KVNLVVLVQKSSFRMPNVQPRRS*NSSQVA Trigger: CGCTACCTGGCTAGAATTGCAACTACGTCTGGGCTG...CACATTGGGCATGCGAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195824.2 |
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| CDS-3UTR TCA 90 bp | CCTCTGTTCACGTTCCGCCTTCATCTGTTCTGCAGGAGTGTCATCCACATAAGCCTAAACTCCAACCAATaGTCAATCTCAGTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: PLFTFRLHLFCRSVIHISLNSNQ*SISVCS Trigger: GGAGCACACTGAGATTGATCATTGGTTGGAGTTTAG...GCTTATGTGGATGACACTCCTGCAGAACAGATGAAGGCGGAACGTGAACAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR GCA 90 bp | TTCCGCCTTCATCTGTTCTGCAGGAGTGTCATCCACATAAGCCTTCCCTTCTTGATTCACGTCAGTGAATaGCACAGTCTCAGAAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: FRLHLFCRSVIHISLPFLIHVSE*HSLRNP Trigger: CGGGTTTCTGAGACTGTGGCATTCACTGACGTGAAT...CAAGAAGGGAAGGCTTATGTGGATGACACTCCTGCAGAACAGATGAAGGCGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR CCA 90 bp | GTGTTTGGATTCTGTCCTCTGTTCACGTTCCGCCTTCATCTGTTCTGCAGGAGTAGGTGCCTTTTAGGGTaGCCCAAACACATAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: VFGFCPLFTFRLHLFCRSRCLLG*PKHIDL Trigger: CAGATCTATGTGTTTGGGCCACCCTAAAAGGCACCT...ACTCCTGCAGAACAGATGAAGGCGGAACGTGAACAGAGGACAGAATCCAAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR GCA 90 bp | AAAGTTAACCTGGTAGTGCTGGTTCAGAAGAGCAGCTTTCGCATGCCCAATGTGATTCACGTCAGTGAATaGCACAGTCTCAGAAACCCG | + |
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Preference number: 4 (lower is better) Translates to: KVNLVVLVQKSSFRMPNVIHVSE*HSLRNP Trigger: CGGGTTTCTGAGACTGTGGCATTCACTGACGTGAAT...CACATTGGGCATGCGAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195824.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTAACCTGGTAGTGCTGGTTCAGAAGAGCAGCTTTCGCATGCCCAATGTGAGGTGCCTTTTAGGGTaGCCCAAACACATAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: KVNLVVLVQKSSFRMPNVRCLLG*PKHIDL Trigger: CAGATCTATGTGTTTGGGCCACCCTAAAAGGCACCT...CACATTGGGCATGCGAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000195824.2 |
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| CDS-3UTR TCA 90 bp | AAAGTTAACCTGGTAGTGCTGGTTCAGAAGAGCAGCTTTCGCATGCCCAATGTGCTAAACTCCAACCAATaGTCAATCTCAGTGTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KVNLVVLVQKSSFRMPNVLNSNQ*SISVCS Trigger: GGAGCACACTGAGATTGATCATTGGTTGGAGTTTAG...CACATTGGGCATGCGAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195824.2 |
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| CDS-3UTR TCA 90 bp | TTCTCAACAGAGTTCTTCCTGTGTTTGGATTCTGTCCTCTGTTCACGTTCCGCCCTCAGAGACAGGCAATaGTTAAGCTCGTTGATTGCA | + |
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Preference number: 4 (lower is better) Translates to: FSTEFFLCLDSVLCSRSALRDRQ*LSSLIA Trigger: TGCAATCAACGAGCTTAATCATTGCCTGTCTCTGAG...GGCGGAACGTGAACAGAGGACAGAATCCAAACACAGGAAGAACTCTGTTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR TCA 90 bp | TTTCCCTTTAAAGTTAACCTGGTAGTGCTGGTTCAGAAGAGCAGCTTTCGCATGCTCAGAGACAGGCAATaGTTAAGCTCGTTGATTGCA | + |
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Preference number: 4 (lower is better) Translates to: FPFKVNLVVLVQKSSFRMLRDRQ*LSSLIA Trigger: TGCAATCAACGAGCTTAATCATTGCCTGTCTCTGAG...CATGCGAAAGCTGCTCTTCTGAACCAGCACTACCAGGTTAACTTTAAAGGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000195824.2 |
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| 3UTR CAA 72 bp | ATCTGTAGATTCTTCTCAACAGAGTTCTTCCTGTGTTaGGATTCTGTCCTCTGTTCACGTTCCGCCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: ICRFFSTEFFLC*DSVLCSRSAFI Trigger: GATGAAGGCGGAACGTGAACAGAGGACAGAATCCAAACACAGGAAGAACTCTGTTGAGAAGAATCTACAGAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS-3UTR TCA 90 bp | CAGGAGTGTCATCCACATAAGCCTTCCCTTCTTGAATTAATTTCTCTGCATACTCTTCCACAGAAATGCTaGCATCACCTTTCACATGTT | + |
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Preference number: 4 (lower is better) Translates to: QECHPHKPSLLELISLHTLPQKC*HHLSHV Trigger: AACATGTGAAAGGTGATGTCAGCATTTCTGTGGAAG...AGTATGCAGAGAAATTAATTCAAGAAGGGAAGGCTTATGTGGATGACACTCCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191900.6 |
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| CDS CCA 90 bp | GTGCCCCTCCTGCCACAGGAACTCCCGAGTTCGGAGGAAAGGCTGTaGGTGTTTGAACTCCCAGCGCACCACATTGCACCACTGGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: VPLLPQELPSSEERL*VFELPAHHIAPLVE Trigger: CTCAACCAGTGGTGCAATGTGGTGCGCTGGGAGTTCAAACACCCACAGCCTTTCCTCCGAACTCGGGAGTTCCTGTGGCAGGAGGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | TCATCAGCTGCTTCCTCAAAGGTGGCAAAGGCGCTGTGCCCCTCCTaGCACAGGAACTCCCGAGTTCGGAGGAAAGGCTGTGGGTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: SSAASSKVAKALCPS*HRNSRVRRKGCGCL Trigger: CAAACACCCACAGCCTTTCCTCCGAACTCGGGAGTTCCTGTGGCAGGAGGGGCACAGCGCCTTTGCCACCTTTGAGGAAGCAGCTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 90 bp | GCACTTTGGCTTCTGGTTTCTCCGCTCCAGCAGGCTGAGCATTACTaGCAGGGTTTGAATGTGAGTTCTGCGATGCTGGGGGCTGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ALWLLVSPLQQAEHY*QGLNVSSAMLGAGQ Trigger: CTGGCCAGCCCCCAGCATCGCAGAACTCACATTCAAACCCTGTCAGTAATGCTCAGCCTGCTGGAGCGGAGAAACCAGAAGCCAAAGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | AAAGGCTGTGGGTGTTTGAACTCCCAGCGCACCACATTGCACCACTaGTTGAGCCTGACGGGCAGGTCTCTGTGGGACTGCACCCATTTA | + |
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Preference number: 5 (lower is better) Translates to: KGCGCLNSQRTTLHH*LSLTGRSLWDCTHL Trigger: TAAATGGGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGTGGTGCGCTGGGAGTTCAAACACCCACAGCCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | TCTGGCTACTTCCTTCATCTCCTCCTGCGCATCCAGGACATTCACTaGGACGACTTCCTTCTTCAGCAATGCAACGTACCGTGGAGCCAC | + |
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Preference number: 5 (lower is better) Translates to: SGYFLHLLLRIQDIH*DDFLLQQCNVPWSH Trigger: GTGGCTCCACGGTACGTTGCATTGCTGAAGAAGGAAGTCGTCCCAGTGAATGTCCTGGATGCGCAGGAGGAGATGAAGGAAGTAGCCAGA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | CGCACCACATTGCACCACTGGTTGAGCCTGACGGGCAGGTCTCTGTaGGACTGCACCCATTTAGCATATGCCGGATACATCACTGTTTCA | + |
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Preference number: 5 (lower is better) Translates to: RTTLHHWLSLTGRSL*DCTHLAYAGYITVS Trigger: TGAAACAGTGATGTATCCGGCATATGCTAAATGGGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGTGGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | CTGTTTCCTGAAACATCCCACTTGGTGCCAACTGAGCGGAAGGCCTaGTGGGCCTCAAGAAAGCCAAACCAGCGTTTAACGTGGACTAGA | + |
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Preference number: 5 (lower is better) Translates to: LFPETSHLVPTERKA*WASRKPNQRLTWTR Trigger: TCTAGTCCACGTTAAACGCTGGTTTGGCTTTCTTGAGGCCCAGCAGGCCTTCCGCTCAGTTGGCACCAAGTGGGATGTTTCAGGAAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | ATAACTCAAGGATCTGTAAAACCTCATCAGCTGCTTCCTCAAAGGTaGCAAAGGCGCTGTGCCCCTCCTGCCACAGGAACTCCCGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: ITQGSVKPHQLLPQR*QRRCAPPATGTPEF Trigger: GAACTCGGGAGTTCCTGTGGCAGGAGGGGCACAGCGCCTTTGCCACCTTTGAGGAAGCAGCTGATGAGGTTTTACAGATCCTTGAGTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | AAACTGACAGCTCTTCATATCACGTGGCCCCACCTCAAGTCTGACTaGAACTCCCTTGAGTTCCCAGTGGTTGAACTTCCAGCCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: KLTALHITWPHLKSD*NSLEFPVVELPAWG Trigger: TCCCCAGGCTGGAAGTTCAACCACTGGGAACTCAAGGGAGTTCCAGTCAGACTTGAGGTGGGGCCACGTGATATGAAGAGCTGTCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | AGCACCAAGCAGCCGCCTTCTGTACTCGTTGCATTTTGCCATCAGTaGCTCTCTGTCTTCTTCAGACAGGGCATTTGTGATTCCACAGGG | + |
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Preference number: 5 (lower is better) Translates to: STKQPPSVLVAFCHQ*LSVFFRQGICDSTG Trigger: CCCTGTGGAATCACAAATGCCCTGTCTGAAGAAGACAGAGAGGCACTGATGGCAAAATGCAACGAGTACAGAAGGCGGCTGCTTGGTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | TTTCCTGAAACATCCCACTTGGTGCCAACTGAGCGGAAGGCCTGCTaGGCCTCAAGAAAGCCAAACCAGCGTTTAACGTGGACTAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: FPETSHLVPTERKAC*ASRKPNQRLTWTRV Trigger: AACTCTAGTCCACGTTAAACGCTGGTTTGGCTTTCTTGAGGCCCAGCAGGCCTTCCGCTCAGTTGGCACCAAGTGGGATGTTTCAGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | CAGCACTGGCTTTGTGATCAAGTGCTCATAAGTGACACAGACGGCTaGGATCGAGAGAGCGTGTGTGCTCTCAGCAAGCCAAGTGATCTT | + |
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Preference number: 5 (lower is better) Translates to: QHWLCDQVLISDTDG*DRESVCALSKPSDL Trigger: AAGATCACTTGGCTTGCTGAGAGCACACACGCTCTCTCGATCCCAGCCGTCTGTGTCACTTATGAGCACTTGATCACAAAGCCAGTGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | AAAGCTGCTTCACAGCTGCGTCTATATCTTCCTTTGGCGCTTTCTTaGCTTTCAATTCACGAACCACATCCCCCTGCACCGCCACTCTGC | + |
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Preference number: 5 (lower is better) Translates to: KAASQLRLYLPLALS*LSIHEPHPPAPPLC Trigger: GCAGAGTGGCGGTGCAGGGGGATGTGGTTCGTGAATTGAAAGCCAAGAAAGCGCCAAAGGAAGATATAGACGCAGCTGTGAAGCAGCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 90 bp | CTGTCAAATAGCACTTTGGCTTCTGGTTTCTCCGCTCCAGCAGGCTaGGCATTACTGACAGGGTTTGAATGTGAGTTCTGCGATGCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LSNSTLASGFSAPAG*ALLTGFECEFCDAG Trigger: CCCAGCATCGCAGAACTCACATTCAAACCCTGTCAGTAATGCTCAGCCTGCTGGAGCGGAGAAACCAGAAGCCAAAGTGCTATTTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | ACATCAGGATTCTTGGGGTGTCTGGCTACTTCCTTCATCTCCTCCTaGGCATCCAGGACATTCACTGGGACGACTTCCTTCTTCAGCAAT | + |
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Preference number: 5 (lower is better) Translates to: TSGFLGCLATSFISS*ASRTFTGTTSFFSN Trigger: ATTGCTGAAGAAGGAAGTCGTCCCAGTGAATGTCCTGGATGCGCAGGAGGAGATGAAGGAAGTAGCCAGACACCCCAAGAATCCTGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | ACATTGCACCACTGGTTGAGCCTGACGGGCAGGTCTCTGTGGGACTaGACCCATTTAGCATATGCCGGATACATCACTGTTTCACTAGTA | + |
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Preference number: 5 (lower is better) Translates to: TLHHWLSLTGRSLWD*THLAYAGYITVSLV Trigger: TACTAGTGAAACAGTGATGTATCCGGCATATGCTAAATGGGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | CGGAAGGCCTGCTGGGCCTCAAGAAAGCCAAACCAGCGTTTAACGTaGACTAGAGTTTTGTTCTGTTTCAAGTGTTCCTGCCATGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RKACWASRKPNQRLT*TRVLFCFKCSCHAA Trigger: TGCTGCATGGCAGGAACACTTGAAACAGAACAAAACTCTAGTCCACGTTAAACGCTGGTTTGGCTTTCTTGAGGCCCAGCAGGCCTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | AGTATCTCGTCTGACTGCTACAAACTGACAGCTCTTCATATCACGTaGCCCCACCTCAAGTCTGACTGGAACTCCCTTGAGTTCCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SISSDCYKLTALHIT*PHLKSDWNSLEFPV Trigger: CACTGGGAACTCAAGGGAGTTCCAGTCAGACTTGAGGTGGGGCCACGTGATATGAAGAGCTGTCAGTTTGTAGCAGTCAGACGAGATACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 90 bp | CAGCCTCCTTCTCAGCAATTGTCAGTTTCTCTCCAGTATCTCGTCTaGCTGCTACAAACTGACAGCTCTTCATATCACGTGGCCCCACCT | + |
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Preference number: 5 (lower is better) Translates to: QPPSQQLSVSLQYLV*LLQTDSSSYHVAPP Trigger: AGGTGGGGCCACGTGATATGAAGAGCTGTCAGTTTGTAGCAGTCAGACGAGATACTGGAGAGAAACTGACAATTGCTGAGAAGGAGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | CTGCGCATCCAGGACATTCACTGGGACGACTTCCTTCTTCAGCAATaGAACGTACCGTGGAGCCACTGGGTCAATAACCTTTTTGTTGAA | + |
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Preference number: 5 (lower is better) Translates to: LRIQDIHWDDFLLQQ*NVPWSHWVNNLFVE Trigger: TTCAACAAAAAGGTTATTGACCCAGTGGCTCCACGGTACGTTGCATTGCTGAAGAAGGAAGTCGTCCCAGTGAATGTCCTGGATGCGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | ATGACCATCACACCGATGGTTCGTGTTGTCAGGCCCCAGGAGCACTaGTATGCAAACTGCTTTTCTCCTGGTGTCTTGGGATCTTCAAAA | + |
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Preference number: 5 (lower is better) Translates to: MTITPMVRVVRPQEH*YANCFSPGVLGSSK Trigger: TTTTGAAGATCCCAAGACACCAGGAGAAAAGCAGTTTGCATACCAGTGCTCCTGGGGCCTGACAACACGAACCATCGGTGTGATGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 90 bp | ATACAGCCCAGACGTAGTTGCAATTCTAGCCAGGTAGCGCAGGATTaGATTCACGTCAGTGAATGCCACAGTCTCAGAAACCCGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: IQPRRSCNSSQVAQD*IHVSECHSLRNPKK Trigger: CTTCTTCGGGTTTCTGAGACTGTGGCATTCACTGACGTGAATTCAATCCTGCGCTACCTGGCTAGAATTGCAACTACGTCTGGGCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046514.13 ENSMUST00000191900.6 ENSMUST00000195824.2 |
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| CDS TCA 90 bp | GCAATTGTCAGTTTCTCTCCAGTATCTCGTCTGACTGCTACAAACTaGCAGCTCTTCATATCACGTGGCCCCACCTCAAGTCTGACTGGA | + |
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Preference number: 5 (lower is better) Translates to: AIVSFSPVSRLTATN*QLFISRGPTSSLTG Trigger: TCCAGTCAGACTTGAGGTGGGGCCACGTGATATGAAGAGCTGTCAGTTTGTAGCAGTCAGACGAGATACTGGAGAGAAACTGACAATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 90 bp | AGCAGACACAGGCTTATACTCGATTCCTGTCAGCGACTTGTACTGTaGCTTCAGCTGAAGAAGTTCTTGTACCGCCGAATCCACTTGATC | + |
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Preference number: 5 (lower is better) Translates to: SRHRLILDSCQRLVL*LQLKKFLYRRIHLI Trigger: GATCAAGTGGATTCGGCGGTACAAGAACTTCTTCAGCTGAAGGCACAGTACAAGTCGCTGACAGGAATCGAGTATAAGCCTGTGTCTGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | CATGGAGCTTCTCTGCAACTATATGGGCTGACAGGTTCGTATGGCTaGTCGCATATGAAGAACCCTCTCCTCTGCAGTTGTATGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: HGASLQLYGLTGSYG*SHMKNPLLCSCMMS Trigger: AGACATCATACAACTGCAGAGGAGAGGGTTCTTCATATGCGACCAGCCATACGAACCTGTCAGCCCATATAGTTGCAGAGAAGCTCCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | GATGCATGGAGCTTCTCTGCAACTATATGGGCTGACAGGTTCGTATaGCTGGTCGCATATGAAGAACCCTCTCCTCTGCAGTTGTATGAT | + |
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Preference number: 5 (lower is better) Translates to: DAWSFSATIWADRFV*LVAYEEPSPLQLYD Trigger: ATCATACAACTGCAGAGGAGAGGGTTCTTCATATGCGACCAGCCATACGAACCTGTCAGCCCATATAGTTGCAGAGAAGCTCCATGCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 90 bp | CACATTTTGGAGAAATTCTGGCCTAAATGGTGTGATGTTGCTCCCTaGATGGCGCGTCCGCTGGCAGATATGAAGGCTTCTATTGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: HILEKFWPKWCDVAP*MARPLADMKASIVV Trigger: AACCACAATAGAAGCCTTCATATCTGCCAGCGGACGCGCCATTCAGGGAGCAACATCACACCATTTAGGCCAGAATTTCTCCAAAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 90 bp | TGGCATTTCCTTTGTGTGCCCATCAGGTATGTATATCAGGATGCATaGAGCTTCTCTGCAACTATATGGGCTGACAGGTTCGTATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WHFLCVPIRYVYQDA*SFSATIWADRFVWL Trigger: CAGCCATACGAACCTGTCAGCCCATATAGTTGCAGAGAAGCTCCATGCATCCTGATATACATACCTGATGGGCACACAAAGGAAATGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 90 bp | GCCTTAGGAGCCTTTTCCGCTTTCAGCTTTCGGACCACCTCCCCTTaGGCAGCGACTTTATTGTATAAAGATGTACTTTCCACAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ALGAFSAFSFRTTSP*AATLLYKDVLSTVF Trigger: AAACACTGTGGAAAGTACATCTTTATACAATAAAGTCGCTGCCCAAGGGGAGGTGGTCCGAAAGCTGAAAGCGGAAAAGGCTCCTAAGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 90 bp | GTCTTTGTTGATGTACTGCTTGAAGTCCTCATCTTTTCCCAGCACTaGCTTTGTGATCAAGTGCTCATAAGTGACACAGACGGCTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: VFVDVLLEVLIFSQH*LCDQVLISDTDGWD Trigger: ATCCCAGCCGTCTGTGTCACTTATGAGCACTTGATCACAAAGCCAGTGCTGGGAAAAGATGAGGACTTCAAGCAGTACATCAACAAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS TCA 90 bp | AGCCTATCACACGAAGACAACTTTGTAGCACTAAACTCCAACCAATaGTCAATCTCAGTGTGCTCCATCAGGTTAGTCCCATACAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SLSHEDNFVALNSNQ*SISVCSIRLVPYSP Trigger: TGGGCTGTATGGGACTAACCTGATGGAGCACACTGAGATTGATCATTGGTTGGAGTTTAGTGCTACAAAGTTGTCTTCGTGTGATAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046514.13 ENSMUST00000191900.6 ENSMUST00000195824.2 |
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| CDS TCA 90 bp | AAGGTCAAGGAGTTCCCAACTAGGTATGTTCTCAGAGACAGGCAATaGTTAAGCTCGTTGATTGCAGAAGTCAGCCTATCACACGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KVKEFPTRYVLRDRQ*LSSLIAEVSLSHED Trigger: GTCTTCGTGTGATAGGCTGACTTCTGCAATCAACGAGCTTAATCATTGCCTGTCTCTGAGAACATACCTAGTTGGGAACTCCTTGACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046514.13 ENSMUST00000191900.6 ENSMUST00000195824.2 |
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| CDS GCA 90 bp | GATAAACATTGTATTTATTCCCAGTCCTTGGGTGGGGCTGGATTTTaGATCGGTAAAGGGTCGGGTCTCTCATACACCCATTGTTACTAC | + |
|
Preference number: 5 (lower is better) Translates to: DKHCIYSQSLGGAGF*IGKGSGLSYTHCYY Trigger: GTAGTAACAATGGGTGTATGAGAGACCCGACCCTTTACCGATGCAAAATCCAGCCCCACCCAAGGACTGGGAATAAATACAATGTTTATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS TCA 90 bp | GACTGTACTCCCAGATGTATGGTTTCCTTATGCCTAAAGCTTCAATaGTCCAATAAAATTGTTCATCTCGGTCGTGGTACTCTGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DCTPRCMVSLCLKLQ*SNKIVHLGRGTLLS Trigger: GGACAACAGAGTACCACGACCGAGATGAACAATTTTATTGGATCATTGAAGCTTTAGGCATAAGGAAACCATACATCTGGGAGTACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS GCA 72 bp | GCTTCCTCAAAGGTGGCAAAGGCGCTGTGCCCCTCCTaGCACAGGAACTCCCGAGTTCGGAGGAAAGGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ASSKVAKALCPS*HRNSRVRRKGC Trigger: ACAGCCTTTCCTCCGAACTCGGGAGTTCCTGTGGCAGGAGGGGCACAGCGCCTTTGCCACCTTTGAGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS GCA 72 bp | TCATCAGCTGCTTCCTCAAAGGTGGCAAAGGCGCTGTaGCCCTCCTGCCACAGGAACTCCCGAGTTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSAASSKVAKAL*PSCHRNSRVRR Trigger: CCTCCGAACTCGGGAGTTCCTGTGGCAGGAGGGGCACAGCGCCTTTGCCACCTTTGAGGAAGCAGCTGATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | GGGTGTTTGAACTCCCAGCGCACCACATTGCACCACTaGTTGAGCCTGACGGGCAGGTCTCTGTGGGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: GCLNSQRTTLHH*LSLTGRSLWDC Trigger: GCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGTGGTGCGCTGGGAGTTCAAACACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 72 bp | TGTTTGAACTCCCAGCGCACCACATTGCACCACTGGTaGAGCCTGACGGGCAGGTCTCTGTGGGACTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: CLNSQRTTLHHW*SLTGRSLWDCT Trigger: GGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGTGGTGCGCTGGGAGTTCAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 90 bp | GGCTGTGGGTGTTTGAACTCCCAGCGCACCACATTGCACCACTGGTaGAGCCTGACGGGCAGGTCTCTGTGGGACTGCACCCATTTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GCGCLNSQRTTLHHW*SLTGRSLWDCTHLA Trigger: TGCTAAATGGGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGTGGTGCGCTGGGAGTTCAAACACCCACAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS TCA 72 bp | GTGGAAGCACTAGGCCCATGTTGTCCCCATGGACCATaGCCATCACACCGATGGTTCGTGTTGTCAGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VEALGPCCPHGP*PSHRWFVLSGP Trigger: GGGGCCTGACAACACGAACCATCGGTGTGATGGTCATGGTCCATGGGGACAACATGGGCCTAGTGCTTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | CTGCCACAGGAACTCCCGAGTTCGGAGGAAAGGCTGTaGGTGTTTGAACTCCCAGCGCACCACATTGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LPQELPSSEERL*VFELPAHHIAP Trigger: TGGTGCAATGTGGTGCGCTGGGAGTTCAAACACCCACAGCCTTTCCTCCGAACTCGGGAGTTCCTGTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 72 bp | AAAGGCTGTGGGTGTTTGAACTCCCAGCGCACCACATaGCACCACTGGTTGAGCCTGACGGGCAGGTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KGCGCLNSQRTT*HHWLSLTGRSL Trigger: CAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAATGTGGTGCGCTGGGAGTTCAAACACCCACAGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 72 bp | TCACGTGGCCCCACCTCAAGTCTGACTGGAACTCCCTaGAGTTCCCAGTGGTTGAACTTCCAGCCTGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRGPTSSLTGTP*SSQWLNFQPGE Trigger: CTCCCCAGGCTGGAAGTTCAACCACTGGGAACTCAAGGGAGTTCCAGTCAGACTTGAGGTGGGGCCACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | CCTGCCCTTCTCCTGCTCCACCTGATGACAGGCCACTaGCTTGGCTTTTGGAAGAGTCTTTCCCTTGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PALLLLHLMTGH*LGFWKSLSLGH Trigger: ATGGCCAAGGGAAAGACTCTTCCAAAAGCCAAGGCAGTGGCCTGTCATCAGGTGGAGCAGGAGAAGGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | GCTTCAAGACCCAATCTGGTCTGTTTCTTAGGCCCCTaGCCTTCTCCTGCTCCACCTGATGACAGGCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: ASRPNLVCFLGP*PSPAPPDDRPL Trigger: CAGTGGCCTGTCATCAGGTGGAGCAGGAGAAGGGCAGGGGCCTAAGAAACAGACCAGATTGGGTCTTGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | ACATCCCACTTGGTGCCAACTGAGCGGAAGGCCTGCTaGGCCTCAAGAAAGCCAAACCAGCGTTTAACGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TSHLVPTERKAC*ASRKPNQRLTW Trigger: CCACGTTAAACGCTGGTTTGGCTTTCTTGAGGCCCAGCAGGCCTTCCGCTCAGTTGGCACCAAGTGGGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | ACTCGGGGTGGAAGCACTAGGCCCATGTTGTCCCCATaGACCATGACCATCACACCGATGGTTCGTGTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TRGGSTRPMLSP*TMTITPMVRVV Trigger: GACAACACGAACCATCGGTGTGATGGTCATGGTCCATGGGGACAACATGGGCCTAGTGCTTCCACCCCGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS GCA 72 bp | GAAACATCCCACTTGGTGCCAACTGAGCGGAAGGCCTaGTGGGCCTCAAGAAAGCCAAACCAGCGTTTAACG | + |
|
Preference number: 6 (lower is better) Translates to: ETSHLVPTERKA*WASRKPNQRLT Trigger: CGTTAAACGCTGGTTTGGCTTTCTTGAGGCCCAGCAGGCCTTCCGCTCAGTTGGCACCAAGTGGGATGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | TCCGACCAAACAAGGTGTAGAACTTGGCAGGATTCTTaGCACAGACACACATGGCTCCGGGCTGCAGCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: SDQTRCRTWQDS*HRHTWLRAAAH Trigger: GTGAGCTGCAGCCCGGAGCCATGTGTGTCTGTGGCAAGAATCCTGCCAAGTTCTACACCTTGTTTGGTCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | TTGCACCACTGGTTGAGCCTGACGGGCAGGTCTCTGTaGGACTGCACCCATTTAGCATATGCCGGATACATC | + |
|
Preference number: 6 (lower is better) Translates to: LHHWLSLTGRSL*DCTHLAYAGYI Trigger: GATGTATCCGGCATATGCTAAATGGGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTGGTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | AGGGCATTTGTGATTCCACAGGGAATGACTACCACCTaGACAGATGCTACTCGGGGTGGAAGCACTAGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RAFVIPQGMTTT*TDATRGGSTRP Trigger: GGGCCTAGTGCTTCCACCCCGAGTAGCATCTGTCCAGGTGGTAGTCATTCCCTGTGGAATCACAAATGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | CACTGGTTGAGCCTGACGGGCAGGTCTCTGTGGGACTaGACCCATTTAGCATATGCCGGATACATCACTGTT | + |
|
Preference number: 6 (lower is better) Translates to: HWLSLTGRSLWD*THLAYAGYITV Trigger: AACAGTGATGTATCCGGCATATGCTAAATGGGTGCAGTCCCACAGAGACCTGCCCGTCAGGCTCAACCAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | ACACCGATGGTTCGTGTTGTCAGGCCCCAGGAGCACTaGTATGCAAACTGCTTTTCTCCTGGTGTCTTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPMVRVVRPQEH*YANCFSPGVLG Trigger: TCCCAAGACACCAGGAGAAAAGCAGTTTGCATACCAGTGCTCCTGGGGCCTGACAACACGAACCATCGGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | ACTCGGACTCGGATGTTAGCACCAAGCAGCCGCCTTCTGTACTCGTaGCATTTTGCCATCAGTGCCTCTCTGTCTTCTTCAGACAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: TRTRMLAPSSRLLYS*HFAISASLSSSDRA Trigger: TGCCCTGTCTGAAGAAGACAGAGAGGCACTGATGGCAAAATGCAACGAGTACAGAAGGCGGCTGCTTGGTGCTAACATCCGAGTCCGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 72 bp | TGTTCACAACAGACCTTGAGGAGCCCTGAGCAGCAATaGACTGCTTCAGCCCCTCAACTGTCATCCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: CSQQTLRSPEQQ*TASAPQLSSLF Trigger: GAAGAGGGATGACAGTTGAGGGGCTGAAGCAGTTCATTGCTGCTCAGGGCTCCTCAAGGTCTGTTGTGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | TTCCTTCATCTCCTCCTGCGCATCCAGGACATTCACTaGGACGACTTCCTTCTTCAGCAATGCAACGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: FLHLLLRIQDIH*DDFLLQQCNVP Trigger: CGGTACGTTGCATTGCTGAAGAAGGAAGTCGTCCCAGTGAATGTCCTGGATGCGCAGGAGGAGATGAAGGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | CAGGCTTCAAACCAACATCAGGATTCTTGGGGTGTCTaGCTACTTCCTTCATCTCCTCCTGCGCATCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: QASNQHQDSWGV*LLPSSPPAHPG Trigger: TCCTGGATGCGCAGGAGGAGATGAAGGAAGTAGCCAGACACCCCAAGAATCCTGATGTTGGTTTGAAGCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | CTTTGTGATCAAGTGCTCATAAGTGACACAGACGGCTaGGATCGAGAGAGCGTGTGTGCTCTCAGCAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LCDQVLISDTDG*DRESVCALSKP Trigger: TGGCTTGCTGAGAGCACACACGCTCTCTCGATCCCAGCCGTCTGTGTCACTTATGAGCACTTGATCACAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | CCTTCTCCTGCTCCACCTGATGACAGGCCACTGCCTTaGCTTTTGGAAGAGTCTTTCCCTTGGCCATCATTT | + |
|
Preference number: 6 (lower is better) Translates to: PSPAPPDDRPLP*LLEESFPWPSF Trigger: AAATGATGGCCAAGGGAAAGACTCTTCCAAAAGCCAAGGCAGTGGCCTGTCATCAGGTGGAGCAGGAGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | GCTCTTCATATCACGTGGCCCCACCTCAAGTCTGACTaGAACTCCCTTGAGTTCCCAGTGGTTGAACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: ALHITWPHLKSD*NSLEFPVVELP Trigger: TGGAAGTTCAACCACTGGGAACTCAAGGGAGTTCCAGTCAGACTTGAGGTGGGGCCACGTGATATGAAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | AAAAGCTGCTTCACAGCTGCGTCTATATCTTCCTTTGGCGCTTTCTaGGCTTTCAATTCACGAACCACATCCCCCTGCACCGCCACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: KSCFTAASISSFGAF*AFNSRTTSPCTATL Trigger: CAGAGTGGCGGTGCAGGGGGATGTGGTTCGTGAATTGAAAGCCAAGAAAGCGCCAAAGGAAGATATAGACGCAGCTGTGAAGCAGCTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 72 bp | CACCCTCTGAGAAAGTCTCTGCATCGGCCCCTTCTATaGAAACCTTGGGACTGTACCACACAGGCTTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HPLRKSLHRPLL*KPWDCTTQASN Trigger: GTTTGAAGCCTGTGTGGTACAGTCCCAAGGTTTTCATAGAAGGGGCCGATGCAGAGACTTTCTCAGAGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 72 bp | AGCACTTTGGCTTCTGGTTTCTCCGCTCCAGCAGGCTaGGCATTACTGACAGGGTTTGAATGTGAGTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: STLASGFSAPAG*ALLTGFECEFC Trigger: GCAGAACTCACATTCAAACCCTGTCAGTAATGCTCAGCCTGCTGGAGCGGAGAAACCAGAAGCCAAAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | CAGGACATTCACTGGGACGACTTCCTTCTTCAGCAATaGAACGTACCGTGGAGCCACTGGGTCAATAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: QDIHWDDFLLQQ*NVPWSHWVNNL Trigger: AAGGTTATTGACCCAGTGGCTCCACGGTACGTTGCATTGCTGAAGAAGGAAGTCGTCCCAGTGAATGTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | AGCTTCTCTGCAACTATATGGGCTGACAGGTTCGTATaGCTGGTCGCATATGAAGAACCCTCTCCTCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SFSATIWADRFV*LVAYEEPSPLQ Trigger: CTGCAGAGGAGAGGGTTCTTCATATGCGACCAGCCATACGAACCTGTCAGCCCATATAGTTGCAGAGAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | TCTGACTGCTACAAACTGACAGCTCTTCATATCACGTaGCCCCACCTCAAGTCTGACTGGAACTCCCTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SDCYKLTALHIT*PHLKSDWNSLE Trigger: CTCAAGGGAGTTCCAGTCAGACTTGAGGTGGGGCCACGTGATATGAAGAGCTGTCAGTTTGTAGCAGTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | CCTGCTCCACCTGATGACAGGCCACTGCCTTGGCTTTaGGAAGAGTCTTTCCCTTGGCCATCATTTTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PAPPDDRPLPWL*EESFPWPSFCF Trigger: GAAACAAAATGATGGCCAAGGGAAAGACTCTTCCAAAAGCCAAGGCAGTGGCCTGTCATCAGGTGGAGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | CGGATGTTAGCACCAAGCAGCCGCCTTCTGTACTCGTaGCATTTTGCCATCAGTGCCTCTCTGTCTTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: RMLAPSSRLLYS*HFAISASLSSS Trigger: TGAAGAAGACAGAGAGGCACTGATGGCAAAATGCAACGAGTACAGAAGGCGGCTGCTTGGTGCTAACATCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS TCA 72 bp | TCATCTCGGTCGTGGTACTCTGTTGTCCTCAAGGCATaGGTAACACCTTCAATGCTGTCCACTATAGGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SSRSWYSVVLKA*VTPSMLSTIGQ Trigger: CTGCCCTATAGTGGACAGCATTGAAGGTGTTACTCATGCCTTGAGGACAACAGAGTACCACGACCGAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS GCA 72 bp | GGGCAGGTCTCTGTGGGACTGCACCCATTTAGCATATaGCGGATACATCACTGTTTCACTAGTAGGACGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GQVSVGLHPFSI*RIHHCFTSRTN Trigger: ATTCGTCCTACTAGTGAAACAGTGATGTATCCGGCATATGCTAAATGGGTGCAGTCCCACAGAGACCTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | TGGGACGACTTCCTTCTTCAGCAATGCAACGTACCGTaGAGCCACTGGGTCAATAACCTTTTTGTTGAACGC | + |
|
Preference number: 6 (lower is better) Translates to: WDDFLLQQCNVP*SHWVNNLFVER Trigger: GCGTTCAACAAAAAGGTTATTGACCCAGTGGCTCCACGGTACGTTGCATTGCTGAAGAAGGAAGTCGTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CCA 72 bp | TCTCTGCAACTATATGGGCTGACAGGTTCGTATGGCTaGTCGCATATGAAGAACCCTCTCCTCTGCAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SLQLYGLTGSYG*SHMKNPLLCSC Trigger: ACAACTGCAGAGGAGAGGGTTCTTCATATGCGACCAGCCATACGAACCTGTCAGCCCATATAGTTGCAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 72 bp | AACCGTGGGTCATCCCATCCATCTACCAGTCCTTCATaGACAAACCACGTGAGCTTTCTTTTGGACAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: NRGSSHPSTSPS*TNHVSFLLDST Trigger: CGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGTCAATGAAGGACTGGTAGATGGATGGGATGACCCACGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 72 bp | TTCACAGCTGCGTCTATATCTTCCTTTGGCGCTTTCTaGGCTTTCAATTCACGAACCACATCCCCCTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: FTAASISSFGAF*AFNSRTTSPCT Trigger: GGTGCAGGGGGATGTGGTTCGTGAATTGAAAGCCAAGAAAGCGCCAAAGGAAGATATAGACGCAGCTGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 72 bp | CAGCGACTTGTACTGTGCCTTCAGCTGAAGAAGTTCTaGTACCGCCGAATCCACTTGATCCTTAGAGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QRLVLCLQLKKF*YRRIHLILRGL Trigger: AAGGCCTCTAAGGATCAAGTGGATTCGGCGGTACAAGAACTTCTTCAGCTGAAGGCACAGTACAAGTCGCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 90 bp | ACTGTAGGAAACCGTGGGTCATCCCATCCATCTACCAGTCCTTCATaGACAAACCACGTGAGCTTTCTTTTGGACAGCACGGTGTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: TVGNRGSSHPSTSPS*TNHVSFLLDSTVLL Trigger: CAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGTCAATGAAGGACTGGTAGATGGATGGGATGACCCACGGTTTCCTACAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS CAA 90 bp | TCACCCTCTGAGAAAGTCTCTGCATCGGCCCCTTCTATGAAAACCTaGGGACTGTACCACACAGGCTTCAAACCAACATCAGGATTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPSEKVSASAPSMKT*GLYHTGFKPTSGFL Trigger: CAAGAATCCTGATGTTGGTTTGAAGCCTGTGTGGTACAGTCCCAAGGTTTTCATAGAAGGGGCCGATGCAGAGACTTTCTCAGAGGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
||
| CDS GCA 72 bp | ATCCTCAGCTGTAGCACAAGTAGAACTCACAGCAGGTaGTGGTCTTTCTTTAGGAGCAGAGCTTGTCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: ILSCSTSRTHSR*WSFFRSRACLL Trigger: AAGGAGACAAGCTCTGCTCCTAAAGAAAGACCAGCACCTGCTGTGAGTTCTACTTGTGCTACAGCTGAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | AGGCTTATACTCGATTCCTGTCAGCGACTTGTACTGTaGCTTCAGCTGAAGAAGTTCTTGTACCGCCGAATC | + |
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Preference number: 6 (lower is better) Translates to: RLILDSCQRLVL*LQLKKFLYRRI Trigger: GATTCGGCGGTACAAGAACTTCTTCAGCTGAAGGCACAGTACAAGTCGCTGACAGGAATCGAGTATAAGCCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | GCCTTTTCCGCTTTCAGCTTTCGGACCACCTCCCCTTaGGCAGCGACTTTATTGTATAAAGATGTACTTTCC | + |
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Preference number: 6 (lower is better) Translates to: AFSAFSFRTTSP*AATLLYKDVLS Trigger: GGAAAGTACATCTTTATACAATAAAGTCGCTGCCCAAGGGGAGGTGGTCCGAAAGCTGAAAGCGGAAAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | GAGAAAGTCTCTGCATCGGCCCCTTCTATGAAAACCTaGGGACTGTACCACACAGGCTTCAAACCAACATCA | + |
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Preference number: 6 (lower is better) Translates to: EKVSASAPSMKT*GLYHTGFKPTS Trigger: TGATGTTGGTTTGAAGCCTGTGTGGTACAGTCCCAAGGTTTTCATAGAAGGGGCCGATGCAGAGACTTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | CAGGCCACTGCCTTGGCTTTTGGAAGAGTCTTTCCCTaGGCCATCATTTTGTTTCTGAGGCTTGTTCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QATALAFGRVFP*AIILFLRLVLL Trigger: AAGCAGAACAAGCCTCAGAAACAAAATGATGGCCAAGGGAAAGACTCTTCCAAAAGCCAAGGCAGTGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | GATTCCTGTCAGCGACTTGTACTGTGCCTTCAGCTGAAGAAGTTCTaGTACCGCCGAATCCACTTGATCCTTAGAGGCCTTTTCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: DSCQRLVLCLQLKKF*YRRIHLILRGLFSF Trigger: AAAGCTGAAAAGGCCTCTAAGGATCAAGTGGATTCGGCGGTACAAGAACTTCTTCAGCTGAAGGCACAGTACAAGTCGCTGACAGGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | CATCCATCTACCAGTCCTTCATTGACAAACCACGTGAGCTTTCTTTaGGACAGCACGGTGTTGTTGAGATTTAAGCGACTGTACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: HPSTSPSLTNHVSFL*DSTVLLRFKRLYSQ Trigger: CTGGGAGTACAGTCGCTTAAATCTCAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGTCAATGAAGGACTGGTAGATGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 72 bp | AGACGTAGTTGCAATTCTAGCCAGGTAGCGCAGGATTaGATTCACGTCAGTGAATGCCACAGTCTCAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: RRSCNSSQVAQD*IHVSECHSLRN Trigger: GTTTCTGAGACTGTGGCATTCACTGACGTGAATTCAATCCTGCGCTACCTGGCTAGAATTGCAACTACGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046514.13 ENSMUST00000191900.6 ENSMUST00000195824.2 |
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| CDS GCA 72 bp | ACGTGGACTAGAGTTTTGTTCTGTTTCAAGTGTTCCTaGCATGCAGCACTTCCTTTTAGGGTGGCCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: TWTRVLFCFKCS*HAALPFRVAQT Trigger: TGTTTGGGCCACCCTAAAAGGAAGTGCTGCATGGCAGGAACACTTGAAACAGAACAAAACTCTAGTCCACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | TGCTGGGCCTCAAGAAAGCCAAACCAGCGTTTAACGTaGACTAGAGTTTTGTTCTGTTTCAAGTGTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: CWASRKPNQRLT*TRVLFCFKCSC Trigger: GCAGGAACACTTGAAACAGAACAAAACTCTAGTCCACGTTAAACGCTGGTTTGGCTTTCTTGAGGCCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | CTTTGTGTGCCCATCAGGTATGTATATCAGGATGCATaGAGCTTCTCTGCAACTATATGGGCTGACAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: LCVPIRYVYQDA*SFSATIWADRF Trigger: GAACCTGTCAGCCCATATAGTTGCAGAGAAGCTCCATGCATCCTGATATACATACCTGATGGGCACACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | CTCAGCTGTAGCACAAGTAGAACTCACAGCAGGTGCTaGTCTTTCTTTAGGAGCAGAGCTTGTCTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: LSCSTSRTHSRC*SFFRSRACLLF Trigger: AAAAAGGAGACAAGCTCTGCTCCTAAAGAAAGACCAGCACCTGCTGTGAGTTCTACTTGTGCTACAGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | AACCACGTGAGCTTTCTTTTGGACAGCACGGTGTTGTaGAGATTTAAGCGACTGTACTCCCAGATGTATGGT | + |
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Preference number: 6 (lower is better) Translates to: NHVSFLLDSTVL*RFKRLYSQMYG Trigger: ACCATACATCTGGGAGTACAGTCGCTTAAATCTCAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | ACCAGTCCTTCATTGACAAACCACGTGAGCTTTCTTTaGGACAGCACGGTGTTGTTGAGATTTAAGCGACTG | + |
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Preference number: 6 (lower is better) Translates to: TSPSLTNHVSFL*DSTVLLRFKRL Trigger: CAGTCGCTTAAATCTCAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGTCAATGAAGGACTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | CCTTCATTGACAAACCACGTGAGCTTTCTTTTGGACAGCACGGTGTaGTTGAGATTTAAGCGACTGTACTCCCAGATGTATGGTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PSLTNHVSFLLDSTV*LRFKRLYSQMYGFL Trigger: AAGGAAACCATACATCTGGGAGTACAGTCGCTTAAATCTCAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGTCAATGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | TTAAGGCAAGGATCTCCTAGCATTAGCTCTTCATGCTTACTGTCTTaGTTGATGTACTGCTTGAAGTCCTCATCTTTTCCCAGCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: LRQGSPSISSSCLLS*LMYCLKSSSFPSTG Trigger: GCCAGTGCTGGGAAAAGATGAGGACTTCAAGCAGTACATCAACAAAGACAGTAAGCATGAAGAGCTAATGCTAGGAGATCCTTGCCTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | TCCGCTTTCAGCTTTCGGACCACCTCCCCTTGGGCAGCGACTTTATaGTATAAAGATGTACTTTCCACAGTGTTTGATGATGACTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: SAFSFRTTSPWAATL*YKDVLSTVFDDDFV Trigger: TACAAAGTCATCATCAAACACTGTGGAAAGTACATCTTTATACAATAAAGTCGCTGCCCAAGGGGAGGTGGTCCGAAAGCTGAAAGCGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 72 bp | TCTCAGCAATTGTCAGTTTCTCTCCAGTATCTCGTCTaGCTGCTACAAACTGACAGCTCTTCATATCACGTG | + |
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Preference number: 6 (lower is better) Translates to: SQQLSVSLQYLV*LLQTDSSSYHV Trigger: CACGTGATATGAAGAGCTGTCAGTTTGTAGCAGTCAGACGAGATACTGGAGAGAAACTGACAATTGCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | TTTTCCTTTGATCCGGATGTTGGCATTTCCTTTGTGTaGCCATCAGGTATGTATATCAGGATGCATGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: FSFDPDVGISFV*PSGMYIRMHGA Trigger: AGCTCCATGCATCCTGATATACATACCTGATGGGCACACAAAGGAAATGCCAACATCCGGATCAAAGGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | ACAAACCACGTGAGCTTTCTTTTGGACAGCACGGTGTaGTTGAGATTTAAGCGACTGTACTCCCAGATGTAT | + |
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Preference number: 6 (lower is better) Translates to: TNHVSFLLDSTV*LRFKRLYSQMY Trigger: ATACATCTGGGAGTACAGTCGCTTAAATCTCAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | AGCTTTCGGACCACCTCCCCTTGGGCAGCGACTTTATaGTATAAAGATGTACTTTCCACAGTGTTTGATGAT | + |
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Preference number: 6 (lower is better) Translates to: SFRTTSPWAATL*YKDVLSTVFDD Trigger: ATCATCAAACACTGTGGAAAGTACATCTTTATACAATAAAGTCGCTGCCCAAGGGGAGGTGGTCCGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 72 bp | CTTCAGCTGAAGAAGTTCTTGTACCGCCGAATCCACTaGATCCTTAGAGGCCTTTTCAGCTTTAAGTTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LQLKKFLYRRIH*ILRGLFSFKFS Trigger: CGAAAACTTAAAGCTGAAAAGGCCTCTAAGGATCAAGTGGATTCGGCGGTACAAGAACTTCTTCAGCTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CAA 90 bp | TCATTGACAAACCACGTGAGCTTTCTTTTGGACAGCACGGTGTTGTaGAGATTTAAGCGACTGTACTCCCAGATGTATGGTTTCCTTATG | + |
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Preference number: 6 (lower is better) Translates to: SLTNHVSFLLDSTVL*RFKRLYSQMYGFLM Trigger: CATAAGGAAACCATACATCTGGGAGTACAGTCGCTTAAATCTCAACAACACCGTGCTGTCCAAAAGAAAGCTCACGTGGTTTGTCAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS GCA 72 bp | TGTTCTCAGAGACAGGCAATGATTAAGCTCGTTGATTaGAGAAGTCAGCCTATCACACGAAGACAACTTTGT | + |
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Preference number: 6 (lower is better) Translates to: CSQRQAMIKLVD*RSQPITRRQLC Trigger: ACAAAGTTGTCTTCGTGTGATAGGCTGACTTCTGCAATCAACGAGCTTAATCATTGCCTGTCTCTGAGAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046514.13 ENSMUST00000191900.6 ENSMUST00000195824.2 |
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| CDS CAA 72 bp | GGATCTCCTAGCATTAGCTCTTCATGCTTACTGTCTTaGTTGATGTACTGCTTGAAGTCCTCATCTTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GSPSISSSCLLS*LMYCLKSSSFP Trigger: GGGAAAAGATGAGGACTTCAAGCAGTACATCAACAAAGACAGTAAGCATGAAGAGCTAATGCTAGGAGATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS TCA 72 bp | GCCTTTTCAGCTTTAAGTTTTCGAACTACTTCTCCTTaGCAAGCCACTCTGTCAAATAGCACTTTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: AFSALSFRTTSP*QATLSNSTLAS Trigger: AGAAGCCAAAGTGCTATTTGACAGAGTGGCTTGTCAAGGAGAAGTAGTTCGAAAACTTAAAGCTGAAAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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| CDS CCA 72 bp | AATGCTGTCCACTATAGGGCAGGCAAAGTCATATGTTaGATAAACATTGTATTTATTCCCAGTCCTTGGGTG | + |
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Preference number: 6 (lower is better) Translates to: NAVHYRAGKVIC*INIVFIPSPWV Trigger: CACCCAAGGACTGGGAATAAATACAATGTTTATCCAACATATGACTTTGCCTGCCCTATAGTGGACAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046514.13 |
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