Pregenerated sensors for EPP13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053367Ensembl transcript IDs: ENSMUST00000121024.8, ENSMUST00000128903.2, ENSMUST00000155248.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGAAGAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTaGTCTACTGGCTATTGTCACAGGGCACGGTCCCCAGACGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: QKRRCWGKPYKGSLG*STGYCHRARSPDGF Trigger: GAAGCCGTCTGGGGACCGTGCCCTGTGACAATAGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR TCA 90 bp | TCCTTGGGAAGTGAAATGCTCTGGAGACGGAGGGCTTGTGAGGGTTaGGCAAAACAGAGCAGAGCGGCTTCACTGGAAGGAACAGCAGGG | + |
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Preference number: 1 (lower is better) Translates to: SLGSEMLWRRRACEG*AKQSRAASLEGTAG Trigger: CCCTGCTGTTCCTTCCAGTGAAGCCGCTCTGCTCTGTTTTGCTCAACCCTCACAAGCCCTCCGTCTCCAGAGCATTTCACTTCCCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128903.2 |
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| 3UTR CCA 90 bp | GTGCACAATAAAGAAAGGTTGAAAATGGCCCAGAAGAGAAGGTGTTaGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTAT | + |
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Preference number: 1 (lower is better) Translates to: VHNKERLKMAQKRRC*GKPYKGSLGCSTGY Trigger: ATAGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCTTCTGGGCCATTTTCAACCTTTCTTTATTGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCATACTCTGCAGAGCGGCTTCACTaGAAGGAACAGCAGGGGTCG | + |
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Preference number: 2 (lower is better) Translates to: RARSPDGFLLSLWTHSYSAERLH*KEQQGS Trigger: CGACCCCTGCTGTTCCTTCCAGTGAAGCCGCTCTGC...AGAGTATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128903.2 |
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| 3UTR-3UTR CCA 90 bp | TCACAGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCATAGGAAGTGAAATGCTCTaGAGACGGAGGGCTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: SQGTVPRRLPAEPLDTLIGSEML*RRRACE Trigger: CTCACAAGCCCTCCGTCTCCAGAGCATTTCACTTCC...TATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 ENSMUST00000155248.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCCAGAAGAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCGGAAGTGAAATGCTCTaGAGACGGAGGGCTTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: GPEEKVLGKALQRLTRLLGSEML*RRRACE Trigger: CTCACAAGCCCTCCGTCTCCAGAGCATTTCACTTCC...GAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCTTCTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTAGCGCCCCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACGGAAGTGAAATGCTCTaGAGACGGAGGGCTTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: ILSAPPPCVICCSVNVRNGSEML*RRRACE Trigger: CTCACAAGCCCTCCGTCTCCAGAGCATTTCACTTCC...GTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGGGGCGCTAAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR CCA 72 bp | GTGAGGGTTGAGCAAAACAGAGCAGAGCGGCTTCACTaGAAGGAACAGCAGGGGTCGTCTCTCAGATCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VRVEQNRAERLH*KEQQGSSLRSR Trigger: CCTGGATCTGAGAGACGACCCCTGCTGTTCCTTCCAGTGAAGCCGCTCTGCTCTGTTTTGCTCAACCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128903.2 |
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| 3UTR TCA 72 bp | ATTGTCACAGGGCACGGTCCCCAGACGGCTTCCTGCTaGGCCTCTGGACACACTCATACTCTGCTAGTTGAT | + |
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Preference number: 3 (lower is better) Translates to: IVTGHGPQTASC*ASGHTHTLLVD Trigger: ATCAACTAGCAGAGTATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTGACAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 ENSMUST00000155248.2 |
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| 3UTR GCA 72 bp | AAGCCAGAGTTCGAAGAGCTTCCTTGGGAAGTGAAATaGTCTGGAGACGGAGGGCTTGTGAGGGTTGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: KPEFEELPWEVK*SGDGGLVRVEQ Trigger: TTGCTCAACCCTCACAAGCCCTCCGTCTCCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAACTCTGGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 ENSMUST00000155248.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTAGTTCGAAGAGCTTCCTaGGGAAGTGAAATGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: EKVLGKALQRLTRLLYWLVRRAS*GSEMLW Trigger: CCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAAC...TAGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR CCA 72 bp | AAAGAAAGGTTGAAAATGGCCCAGAAGAGAAGGTGTTaGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: KERLKMAQKRRC*GKPYKGSLGCS Trigger: AGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCTTCTGGGCCATTTTCAACCTTTCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTAGCGCCCCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACGTTCGAAGAGCTTCCTaGGGAAGTGAAATGCTCTGG | + |
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Preference number: 3 (lower is better) Translates to: ILSAPPPCVICCSVNVRNVRRAS*GSEMLW Trigger: CCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAAC...GTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGGGGCGCTAAGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTTAGCGCCCCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACCACAATAAAGAAAGGTaGAAAATGGCCCAGAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: ILSAPPPCVICCSVNVRNHNKER*KMAQKR Trigger: TCTCTTCTGGGCCATTTTCAACCTTTCTTTATTGTG...GTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGGGGCGCTAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR GCA 90 bp | CACAGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCATACAGGAACGCAGGCCTCTaGCAGGCCCAGGAAAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HRARSPDGFLLSLWTHSYRNAGL*QAQEKE Trigger: CTCCTTTTCCTGGGCCTGGCAGAGGCCTGCGTTCCT...GTATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS-3UTR CCA 90 bp | TTGTCACAGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCTCTTCATTCAGTACTTaGAGGCTCAGCAGACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSQGTVPRRLPAEPLDTLSSFST*RLSRPR Trigger: CCTTGGTCTGCTGAGCCTCCAAGTACTGAATGAAGA...GAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 ENSMUST00000155248.2 |
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| CDS-3UTR CCA 90 bp | AGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCATACTCTTTGTCTGAAACCATCTaGGGACAGTCTGCCCATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RARSPDGFLLSLWTHSYSLSETI*GQSAHQ Trigger: TTGATGGGCAGACTGTCCCCAGATGGTTTCAGACAA...AGAGTATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTGACTGTGGTGGTGGCTaGAGGAGGCTTCACTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: REGVGESLTKAHSAALLADCGGG*RRLHFF Trigger: GAAGAAGTGAAGCCTCCTCCAGCCACCACCACAGTC...AGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTGATTTTCTCTTCCATTaGGACTTCACGAGGAACGCA | + |
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Preference number: 4 (lower is better) Translates to: REGVGESLTKAHSAALLADFLFH*DFTRNA Trigger: TGCGTTCCTCGTGAAGTCGCAATGGAAGAGAAAATC...AGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS-3UTR CCA 90 bp | GTTGATAAGCCAGAGTTCGAAGAGCTTCCTTGGGAAGTGAAATGCTCTGGAGACTCTTCATTCAGTACTTaGAGGCTCAGCAGACCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDKPEFEELPWEVKCSGDSSFST*RLSRPR Trigger: CCTTGGTCTGCTGAGCCTCCAAGTACTGAATGAAGA...GTCTCCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAACTCTGGCTTATCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 ENSMUST00000155248.2 |
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| CDS-3UTR CCA 90 bp | CCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTAGCAGACTGTGGTGGTGGCTaGAGGAGGCTTCACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPPCVICCSVNVRNKHLADCGGG*RRLHFF Trigger: GAAGAAGTGAAGCCTCCTCCAGCCACCACCACAGTC...TGCTAAATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CCA 90 bp | CCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTAGCATTGTCTGAAACCATCTaGGGACAGTCTGCCCATCAA | + |
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Preference number: 4 (lower is better) Translates to: PPPCVICCSVNVRNKHLALSETI*GQSAHQ Trigger: TTGATGGGCAGACTGTCCCCAGATGGTTTCAGACAA...TGCTAAATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS-3UTR CCA 90 bp | CCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTAGCATCTTCATTCAGTACTTaGAGGCTCAGCAGACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: PPPCVICCSVNVRNKHLASSFST*RLSRPR Trigger: CCTTGGTCTGCTGAGCCTCCAAGTACTGAATGAAGA...TGCTAAATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR TCA 90 bp | CCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTAGCATTTCATTTCTTCTTCTaGCTTGTCATCTGGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: PPPCVICCSVNVRNKHLAFHFFF*LVIWGQ Trigger: CTGTCCCCAGATGACAAGTCAGAAGAAGAAATGAAA...TGCTAAATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155248.2 |
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| CDS-3UTR GCA 90 bp | GTTGATAAGCCAGAGTTCGAAGAGCTTCCTTGGGAAGTGAAATGCTCTGGAGACGCTTCACTTCTTCTTTaGAGTTACTTGTTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VDKPEFEELPWEVKCSGDASLLL*SYLFLH Trigger: ATGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGC...GTCTCCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAACTCTGGCTTATCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR GCA 90 bp | CCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTAGCAATTAATGCTTCACTTCTTCTTTaGAGTTACTTGTTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PCVICCSVNVRNKHLAINASLLL*SYLFLH Trigger: ATGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGC...ATTAATTGCTAAATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | TCACAGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCATATTCTTCATTCAGTACTaGGAGGCTCAGCAGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: SQGTVPRRLPAEPLDTLIFFIQY*EAQQTK Trigger: CTTGGTCTGCTGAGCCTCCAAGTACTGAATGAAGAA...TATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | TCACAGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCATAGGAGGATATGATGTTTaGTCTGAAACCATCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: SQGTVPRRLPAEPLDTLIGGYDV*SETIWG Trigger: TCCCCAGATGGTTTCAGACAAAACATCATATCCTCC...TATGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTAACCAGGGGAGGCGTCTaGGAGGAGGATATGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: EKVLGKALQRLTRLLYWLTRGGV*EEDMMF Trigger: AAACATCATATCCTCCTCCAAGACGCCTCCCCTGGT...TAGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS-3UTR CAA 90 bp | GGCCCAGAAGAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTTCTTCATTCAGTACTaGGAGGCTCAGCAGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: GPEEKVLGKALQRLTRLLFFIQY*EAQQTK Trigger: CTTGGTCTGCTGAGCCTCCAAGTACTGAATGAAGAA...GAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCTTCTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | TGTCACAGGGCACGGTCCCCAGACGGCTTCCTGCTGAGCCTCTGGACACACTCAATTCCTTTCAGCATTTaGATTTTCTCTTCCATTGCG | + |
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Preference number: 5 (lower is better) Translates to: CHRARSPDGFLLSLWTHSIPFSI*IFSSIA Trigger: CGCAATGGAAGAGAAAATCAAAATGCTGAAAGGAAT...TGAGTGTGTCCAGAGGCTCAGCAGGAAGCCGTCTGGGGACCGTGCCCTGTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS CCA 90 bp | GTTCCATCCACTGGTCCTCACAAGTCCCCTGACTGTGGTGGTGGCTaGAGGAGGCTTCACTTCTTCTTTGCAGTTACTTGTTTCTTCATT | + |
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Preference number: 5 (lower is better) Translates to: VPSTGPHKSPDCGGG*RRLHFFFAVTCFFI Trigger: AATGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGCCTCCTCCAGCCACCACCACAGTCAGGGGACTTGTGAGGACCAGTGGATGGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | GTTGATAAGCCAGAGTTCGAAGAGCTTCCTTGGGAAGTGAAATGCTCTGGAGACACCAGGGGAGGCGTCTaGGAGGAGGATATGATGTTT | + |
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Preference number: 5 (lower is better) Translates to: VDKPEFEELPWEVKCSGDTRGGV*EEDMMF Trigger: AAACATCATATCCTCCTCCAAGACGCCTCCCCTGGT...GTCTCCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAACTCTGGCTTATCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTAATTTCTTCTTCTGACTaGTCATCTGGGGACAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: EKVLGKALQRLTRLLYWLISSSD*SSGDSL Trigger: CAGACTGTCCCCAGATGACAAGTCAGAAGAAGAAAT...TAGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155248.2 |
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| CDS CCA 90 bp | GGGAGGCGTCTTGGAGGAGGATATGATGTTTTGTCTGAAACCATCTaGGGACAGTCTGCCCATCAACCCCAAGATTCCTTTCAGCATTTT | + |
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Preference number: 5 (lower is better) Translates to: GRRLGGGYDVLSETI*GQSAHQPQDSFQHF Trigger: AAAATGCTGAAAGGAATCTTGGGGTTGATGGGCAGACTGTCCCCAGATGGTTTCAGACAAAACATCATATCCTCCTCCAAGACGCCTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS-3UTR CAA 90 bp | AGCGCCCCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTCTTCATTCAGTACTaGGAGGCTCAGCAGACCAAG | + |
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Preference number: 5 (lower is better) Translates to: SAPPPCVICCSVNVRNKHFFIQY*EAQQTK Trigger: CTTGGTCTGCTGAGCCTCCAAGTACTGAATGAAGAA...ATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGGGGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | GAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACTGGCTAGGCTTCACTTCTTCTTaGCAGTTACTTGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: EKVLGKALQRLTRLLYWLGFTSS*QLLVSS Trigger: TGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGCC...TAGCCAGTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | CCAGAAGAGAAGGTGTTGGGGAAAGCCTTACAAAGGCTCACTCGGCTGCTCTACGGCTTCACTTCTTCTTaGCAGTTACTTGTTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: PEEKVLGKALQRLTRLLYGFTSS*QLLVSS Trigger: TGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGCC...GTAGAGCAGCCGAGTGAGCCTTTGTAAGGCTTTCCCCAACACCTTCTCTTCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS-3UTR CAA 90 bp | GTTGATAAGCCAGAGTTCGAAGAGCTTCCTTGGGAAGTGAAATGCTCTGGAGACGGAGGATATGATGTTTaGTCTGAAACCATCTGGGGA | + |
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Preference number: 5 (lower is better) Translates to: VDKPEFEELPWEVKCSGDGGYDV*SETIWG Trigger: TCCCCAGATGGTTTCAGACAAAACATCATATCCTCC...GTCTCCAGAGCATTTCACTTCCCAAGGAAGCTCTTCGAACTCTGGCTTATCAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS-3UTR CAA 90 bp | CCTCCACCCTGTGTCATTTGCTGTTCTGTGAATGTAAGAAACAAGCATTTAGCAATTTCTTCTTCTGACTaGTCTGGAGTGGTTACCAGG | + |
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Preference number: 5 (lower is better) Translates to: PPPCVICCSVNVRNKHLAISSSD*SGVVTR Trigger: CCTGGTAACCACTCCAGACAAGTCAGAAGAAGAAAT...TGCTAAATGCTTGTTTCTTACATTCACAGAACAGCAAATGACACAGGGTGGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS CAA 72 bp | TACCAGGGGAGGCGTCTTGGAGGAGGATATGATGTTTaGTCTGAAACCATCTGGGGACAGTCTGCCCATCAA | + |
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Preference number: 6 (lower is better) Translates to: YQGRRLGGGYDV*SETIWGQSAHQ Trigger: TTGATGGGCAGACTGTCCCCAGATGGTTTCAGACAAAACATCATATCCTCCTCCAAGACGCCTCCCCTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS CAA 90 bp | AGTCCCCTGACTGTGGTGGTGGCTGGAGGAGGCTTCACTTCTTCTTaGCAGTTACTTGTTTCTTCATTCAGTACTTGGAGGCTCAGCAGA | + |
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Preference number: 6 (lower is better) Translates to: SPLTVVVAGGGFTSS*QLLVSSFSTWRLSR Trigger: TCTGCTGAGCCTCCAAGTACTGAATGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGCCTCCTCCAGCCACCACCACAGTCAGGGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS GCA 72 bp | CTGTGGTGGTGGCTGGAGGAGGCTTCACTTCTTCTTTaGAGTTACTTGTTTCTTCATTCAGTACTTGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LWWWLEEASLLL*SYLFLHSVLGG Trigger: GCCTCCAAGTACTGAATGAAGAAACAAGTAACTGCAAAGAAGAAGTGAAGCCTCCTCCAGCCACCACCACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000155248.2 |
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| CDS CAA 72 bp | TCTGACTTGTCTGGAGTGGTTACCAGGGGAGGCGTCTaGGAGGAGGATATGATGTTTTGTCTGAAACCATCT | + |
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Preference number: 6 (lower is better) Translates to: SDLSGVVTRGGV*EEDMMFCLKPS Trigger: AGATGGTTTCAGACAAAACATCATATCCTCCTCCAAGACGCCTCCCCTGGTAACCACTCCAGACAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS CCA 72 bp | CTTGGAGGAGGATATGATGTTTTGTCTGAAACCATCTaGGGACAGTCTGCCCATCAACCCCAAGATTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LGGGYDVLSETI*GQSAHQPQDSF Trigger: AAAGGAATCTTGGGGTTGATGGGCAGACTGTCCCCAGATGGTTTCAGACAAAACATCATATCCTCCTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000121024.8 ENSMUST00000128903.2 |
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| CDS CAA 72 bp | AGTCTGCCCATCAACCCCAAGATTCCTTTCAGCATTTaGATTTTCTCTTCCATTGCGACTTCACGAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: SLPINPKIPFSI*IFSSIATSRGT Trigger: CGTTCCTCGTGAAGTCGCAATGGAAGAGAAAATCAAAATGCTGAAAGGAATCTTGGGGTTGATGGGCAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121024.8 |
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| CDS CAA 72 bp | ACAGTAGCGGCAGTAACACTTCTTCTTTGCAGTTACTaGTTTCTTCATTCAGTACTTGGAGGCTCAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: TVAAVTLLLCSY*FLHSVLGGSAD Trigger: GTCTGCTGAGCCTCCAAGTACTGAATGAAGAAACAAGTAACTGCAAAGAAGAAGTGTTACTGCCGCTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128903.2 |
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