Pregenerated sensors for EPOP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043439Ensembl transcript IDs: ENSMUST00000052281.6
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTCCCCTGCGGTGAAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATaGTCACTAAGCTTTCTGCAGGCTTTCCCGGACGCCAGTCCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LPCGEGSARPQGGRR*SLSFLQAFPDASPW Trigger: CCAAGGACTGGCGTCCGGGAAAGCCTGCAGAAAGCTTAGTGACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACCGCAGGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR GCA 90 bp | CTGTCCCTTTCTTTTGGTCTTCGGGCCTTAGCCGCTGTGCTCCCCTaGGGTGAAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LSLSFGLRALAAVLP*GEGSARPQGGRRWS Trigger: TGACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACCGCAGGGGAGCACAGCGGCTAAGGCCCGAAGACCAAAAGAAAGGGACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR TCA 90 bp | CCTTTCTTTTGGTCTTCGGGCCTTAGCCGCTGTGCTCCCCTGCGGTaGAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATGGTCACTAAG | + |
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Preference number: 1 (lower is better) Translates to: PFFWSSGLSRCAPLR*RLCPPAGRTEMVTK Trigger: CTTAGTGACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACCGCAGGGGAGCACAGCGGCTAAGGCCCGAAGACCAAAAGAAAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR TCA 90 bp | GTCAATCACCTTCAAACCCCAACCACAGCCCCCACACCGCTAAACTaGCCCTCATTCAAACATGGAAACAACCGGTTTGTCCATCACCAA | + |
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Preference number: 1 (lower is better) Translates to: VNHLQTPTTAPTPLN*PSFKHGNNRFVHHQ Trigger: TTGGTGATGGACAAACCGGTTGTTTCCATGTTTGAATGAGGGTCAGTTTAGCGGTGTGGGGGCTGTGGTTGGGGTTTGAAGGTGATTGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR GCA 90 bp | GAAGATCACTGTCATTTGAGGTCCCGCGGGCCACAGCCCATAAAATaGAAAGCAAAGATCAGCCAAATTTCAGAATCGATGCTCCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: EDHCHLRSRGPQPIK*KAKISQISESMLPP Trigger: AGGAGGGAGCATCGATTCTGAAATTTGGCTGATCTTTGCTTTGCATTTTATGGGCTGTGGCCCGCGGGACCTCAAATGACAGTGATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCTGGGACTGAAGATCTTGACAAGGGAAAATCACCTGAACTTGGGGAGGGGGAAGATCACTGTCATTTaGGGTCCCGCGGGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: WLGLKILTRENHLNLGRGKITVI*GPAGHS Trigger: GCTGTGGCCCGCGGGACCTCAAATGACAGTGATCTT...CCCCCTCCCCAAGTTCAGGTGATTTTCCCTTGTCAAGATCTTCAGTCCCAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR-3UTR GCA 90 bp | TTTGAGGTCCCGCGGGCCACAGCCCATAAAATGCAAAGCAAAGATCAGCCAAATCCGGGGAACCCAACTTaGCCCCGGGTAGAAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: FEVPRATAHKMQSKDQPNPGNPT*PRVEEV Trigger: GACCTCTTCTACCCGGGGGCAAGTTGGGTTCCCCGG...ATTTGGCTGATCTTTGCTTTGCATTTTATGGGCTGTGGCCCGCGGGACCTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGCTGTCAATCACCTTCAAACCCCAACCACAGCCCCCACACCGCTAAACCAGGGAGGACGGAGATaGTCACTAAGCTTTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QGAVNHLQTPTTAPTPLNQGGRR*SLSFLQ Trigger: CTGCAGAAAGCTTAGTGACCATCTCCGTCCTCCCTG...GTTTAGCGGTGTGGGGGCTGTGGTTGGGGTTTGAAGGTGATTGACAGCTCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR-3UTR CCA 90 bp | ATGGAAACAACCGGTTTGTCCATCACCAAGGTCCGTCCCTCTGTCCCTTTCTTTATCGATGCTCCCTCCTaGAGCCCTCAGTCTGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: METTGLSITKVRPSVPFFIDAPS*SPQSVR Trigger: CCGGACAGACTGAGGGCTCCAGGAGGGAGCATCGAT...AAAGAAAGGGACAGAGGGACGGACCTTGGTGATGGACAAACCGGTTGTTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR-3UTR TCA 90 bp | CAACCGGTTTGTCCATCACCAAGGTCCGTCCCTCTGTCCCTTTCTTTTGGTCTTGATCTTCCACAAAGATaGGTAGAAAGAGCATCAGCC | + |
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Preference number: 2 (lower is better) Translates to: QPVCPSPRSVPLSLSFGLDLPQR*VERASA Trigger: GGCTGATGCTCTTTCTACTCATCTTTGTGGAAGATC...AAGACCAAAAGAAAGGGACAGAGGGACGGACCTTGGTGATGGACAAACCGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR-3UTR CCA 90 bp | CATCCAACCTTCCGGCAAAGGGAAACTCCAAAACTGGACAAAAGGGTAAAGTCTTCTGTCCCTTTCTTTTaGTCTTCGGGCCTTAGCCGC | + |
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Preference number: 2 (lower is better) Translates to: HPTFRQRETPKLDKRVKSSVPFF*SSGLSR Trigger: GCGGCTAAGGCCCGAAGACCAAAAGAAAGGGACAGA...AGACTTTACCCTTTTGTCCAGTTTTGGAGTTTCCCTTTGCCGGAAGGTTGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR CCA 72 bp | GGTGAAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATaGTCACTAAGCTTTCTGCAGGCTTTCCCGGACGCC | + |
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Preference number: 3 (lower is better) Translates to: GEGSARPQGGRR*SLSFLQAFPDA Trigger: GGCGTCCGGGAAAGCCTGCAGAAAGCTTAGTGACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR CCA 72 bp | TCCATCACCAAGGTCCGTCCCTCTGTCCCTTTCTTTTaGTCTTCGGGCCTTAGCCGCTGTGCTCCCCTGCGG | + |
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Preference number: 3 (lower is better) Translates to: SITKVRPSVPFF*SSGLSRCAPLR Trigger: CCGCAGGGGAGCACAGCGGCTAAGGCCCGAAGACCAAAAGAAAGGGACAGAGGGACGGACCTTGGTGATGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR CCA 72 bp | AAAGATCAGCCAAATTTCAGAATCGATGCTCCCTCCTaGAGCCCTCAGTCTGTCCGGGGAACCCAACTTGCC | + |
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Preference number: 3 (lower is better) Translates to: KDQPNFRIDAPS*SPQSVRGTQLA Trigger: GGCAAGTTGGGTTCCCCGGACAGACTGAGGGCTCCAGGAGGGAGCATCGATTCTGAAATTTGGCTGATCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR CCA 72 bp | AGCCCCCACACCGCTAAACTGACCCTCATTCAAACATaGAAACAACCGGTTTGTCCATCACCAAGGTCCGTC | + |
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Preference number: 3 (lower is better) Translates to: SPHTAKLTLIQT*KQPVCPSPRSV Trigger: GACGGACCTTGGTGATGGACAAACCGGTTGTTTCCATGTTTGAATGAGGGTCAGTTTAGCGGTGTGGGGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR GCA 72 bp | AATGCAAAGCAAAGATCAGCCAAATTTCAGAATCGATaGTCCCTCCTGGAGCCCTCAGTCTGTCCGGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: NAKQRSAKFQNR*SLLEPSVCPGN Trigger: GTTCCCCGGACAGACTGAGGGCTCCAGGAGGGAGCATCGATTCTGAAATTTGGCTGATCTTTGCTTTGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR GCA 72 bp | TGTCATTTGAGGTCCCGCGGGCCACAGCCCATAAAATaGAAAGCAAAGATCAGCCAAATTTCAGAATCGATG | + |
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Preference number: 3 (lower is better) Translates to: CHLRSRGPQPIK*KAKISQISESM Trigger: CATCGATTCTGAAATTTGGCTGATCTTTGCTTTGCATTTTATGGGCTGTGGCCCGCGGGACCTCAAATGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR TCA 90 bp | CTGTGCTCCCCTGCGGTGAAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATGGTCTGCCGTCGAGGGGCTaGGCGCGGGTGCCTCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: LCSPAVKALPARREDGDGLPSRG*ARVPQA Trigger: CGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAG...ACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACCGCAGGGGAGCACAG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CTGTGCTCCCCTGCGGTGAAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATGGTCGGTTGAAATGTTCCTaGCGGAGATCGCGGGGCGGG | + |
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Preference number: 4 (lower is better) Translates to: LCSPAVKALPARREDGDGRLKCS*RRSRGG Trigger: CCCGCCCCGCGATCTCCGCCAGGAACATTTCAACCG...ACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACCGCAGGGGAGCACAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CTGTGCTCCCCTGCGGTGAAGGCTCTGCCCGCCCGCAGGGAGGACGGAGATGGTTTCCACCACCAGAGCTaGGGGACAGGGGAAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LCSPAVKALPARREDGDGFHHQS*GTGEAV Trigger: GACTGCTTCCCCTGTCCCCCAGCTCTGGTGGTGGAA...ACCATCTCCGTCCTCCCTGCGGGCGGGCAGAGCCTTCACCGCAGGGGAGCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR GCA 90 bp | CTTTCTTTTGGTCTTCGGGCCTTAGCCGCTGTGCTCCCCTGCGGTGAAGGCTCTGAACCAGCGCCGAAGTaGGGGAAGCCGCCTCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LSFGLRALAAVLPCGEGSEPAPK*GKPPPP Trigger: GGGCGGAGGCGGCTTCCCGCACTTCGGCGCTGGTTC...AGAGCCTTCACCGCAGGGGAGCACAGCGGCTAAGGCCCGAAGACCAAAAGAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTTGGTCTTCGGGCCTTAGCCGCTGTGCTCCCCTGCGGTGAAGGCTCTGGGCAGGCGGCGGCTTaGCGTCTCCCTGGAGGCGAA | + |
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Preference number: 4 (lower is better) Translates to: LSFGLRALAAVLPCGEGSGQAAA*RLPGGE Trigger: TTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCC...AGAGCCTTCACCGCAGGGGAGCACAGCGGCTAAGGCCCGAAGACCAAAAGAAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CAGGGAGCTGTCAATCACCTTCAAACCCCAACCACAGCCCCCACACCGCTAAACATCAAGACCCCGGGCTaGCCTGGGCGGGGACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: QGAVNHLQTPTTAPTPLNIKTPG*PGRGPG Trigger: GCCTGGTCCCCGCCCAGGCCAGCCCGGGGTCTTGAT...GTTTAGCGGTGTGGGGGCTGTGGTTGGGGTTTGAAGGTGATTGACAGCTCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CTTTCTTTTGGTCTTCGGGCCTTAGCCGCTGTGCTCCCCTGCGGTGAAGGCTCTAGGACGGCCGGGGTTTaGCAAGGGCGCAGAAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: LSFGLRALAAVLPCGEGSRTAGV*QGRRRR Trigger: TCGCCTTCTGCGCCCTTGCCAAACCCCGGCCGTCCT...AGAGCCTTCACCGCAGGGGAGCACAGCGGCTAAGGCCCGAAGACCAAAAGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR GCA 90 bp | TCCTCTCAGAATGTGAGGAGAACGCTGAGGCTGGAGGTCTCTTTCCTTCATCCAGCAGCGGCCCGGAGGTaGGCAGGAACCAGCGCCGAA | + |
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Preference number: 4 (lower is better) Translates to: SSQNVRRTLRLEVSFLHPAAARR*AGTSAE Trigger: TTCGGCGCTGGTTCCTGCGCACCTCCGGGCCGCTGC...TGGATGAAGGAAAGAGACCTCCAGCCTCAGCGTTCTCCTCACATTCTGAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | GGAAACAACCGGTTTGTCCATCACCAAGGTCCGTCCCTCTGTCCCTTTCTTTTGCACTTCCACAGCGGGTaGGCAGGCGGCGGCTTGGCG | + |
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Preference number: 4 (lower is better) Translates to: GNNRFVHHQGPSLCPFLLHFHSG*AGGGLA Trigger: CGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTG...CAAAAGAAAGGGACAGAGGGACGGACCTTGGTGATGGACAAACCGGTTGTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | GAGGAGAACGCTGAGGCTGGAGGTCTCTTTCCTTCATCCAACCTTCCGGCAAAGCCCTCGGCGCAAACTTaGAGTGTCCAGGGCGAACCC | + |
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Preference number: 4 (lower is better) Translates to: EENAEAGGLFPSSNLPAKPSAQT*SVQGEP Trigger: GGGTTCGCCCTGGACACTCCAAGTTTGCGCCGAGGG...CTTTGCCGGAAGGTTGGATGAAGGAAAGAGACCTCCAGCCTCAGCGTTCTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR GCA 90 bp | CATCCAACCTTCCGGCAAAGGGAAACTCCAAAACTGGACAAAAGGGTAAAGTCTCGGGGAAGCGGGCACTaGCAGGCGGGGAGGAGGACA | + |
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Preference number: 4 (lower is better) Translates to: HPTFRQRETPKLDKRVKSRGSGH*QAGRRT Trigger: TGTCCTCCTCCCCGCCTGGCAGTGCCCGCTTCCCCG...AGACTTTACCCTTTTGTCCAGTTTTGGAGTTTCCCTTTGCCGGAAGGTTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR GCA 90 bp | TTTGAGGTCCCGCGGGCCACAGCCCATAAAATGCAAAGCAAAGATCAGCCAAATGCGGGTCCTCCCATCTaGCACTTCCACAGCGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: FEVPRATAHKMQSKDQPNAGPPI*HFHSGW Trigger: CCACCCGCTGTGGAAGTGGCAGATGGGAGGACCCGC...ATTTGGCTGATCTTTGCTTTGCATTTTATGGGCTGTGGCCCGCGGGACCTCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR TCA 90 bp | TGGCTGGGACTGAAGATCTTGACAAGGGAAAATCACCTGAACTTGGGGAGGGGGGGCGGATCAGGCGGTTaGAATGTTCCTGGCGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: WLGLKILTRENHLNLGRGGGSGG*NVPGGD Trigger: ATCTCCGCCAGGAACATTTCAACCGCCTGATCCGCC...CCCCCTCCCCAAGTTCAGGTGATTTTCCCTTGTCAAGATCTTCAGTCCCAGCCA 56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| 3UTR CAA 72 bp | AGCCGGACCTCTCGGGTGCTTGAAGATCACTGTCATTaGAGGTCCCGCGGGCCACAGCCCATAAAATGCAAA | + |
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Preference number: 4 (lower is better) Translates to: SRTSRVLEDHCH*RSRGPQPIKCK Trigger: TTTGCATTTTATGGGCTGTGGCCCGCGGGACCTCAAATGACAGTGATCTTCAAGCACCCGAGAGGTCCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CATCCAACCTTCCGGCAAAGGGAAACTCCAAAACTGGACAAAAGGGTAAAGTCTCAGTGGGGAGAACTCTaGGGTCCCCCGACGCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HPTFRQRETPKLDKRVKSQWGEL*GPPTRL Trigger: AAGCCGCGTCGGGGGACCCCAGAGTTCTCCCCACTG...AGACTTTACCCTTTTGTCCAGTTTTGGAGTTTCCCTTTGCCGGAAGGTTGGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | AAATGCAAAGCAAAGATCAGCCAAATTTCAGAATCGATGCTCCCTCCTGGAGCCGGCACGCAGGCACAGTaGGGAGAACTCTGGGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KCKAKISQISESMLPPGAGTQAQ*GELWGP Trigger: GGGACCCCAGAGTTCTCCCCACTGTGCCTGCGTGCC...GGCTCCAGGAGGGAGCATCGATTCTGAAATTTGGCTGATCTTTGCTTTGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CCA 90 bp | CCCATAAAATGCAAAGCAAAGATCAGCCAAATTTCAGAATCGATGCTCCCTCCTGGCTTGGCGTCTCCCTaGAGGCGAAGCGAGGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: PIKCKAKISQISESMLPPGLASP*RRSEEA Trigger: GGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCC...AGGAGGGAGCATCGATTCTGAAATTTGGCTGATCTTTGCTTTGCATTTTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS TCA 90 bp | GGAGATCGCGGGGCGGGTCCGGTGCTGCGTCTGCCGTCGAGGGGCTaGGCGCGGGTGCCTCAGGCGCGGTCGGCGCAGGGTCTCCACCCC | + |
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Preference number: 5 (lower is better) Translates to: GDRGAGPVLRLPSRG*ARVPQARSAQGLHP Trigger: GGGGTGGAGACCCTGCGCCGACCGCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 90 bp | GGGCGGGTCCGGTGCTGCGTCTGCCGTCGAGGGGCTGAGCGCGGGTaGCTCAGGCGCGGTCGGCGCAGGGTCTCCACCCCCTGGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: GRVRCCVCRRGAERG*LRRGRRRVSTPWSL Trigger: GAGGCTCCAGGGGGTGGAGACCCTGCGCCGACCGCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 90 bp | GGCGCAGGGTCTCCACCCCCTGGAGCCTCGGAGGCCGGCACAGGCTaGTCGGAAGGCGCAGGCTCCGGGGAGAGGCCCGCAGGTGGCGAC | + |
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Preference number: 5 (lower is better) Translates to: GAGSPPPGASEAGTG*SEGAGSGERPAGGD Trigger: GTCGCCACCTGCGGGCCTCTCCCCGGAGCCTGCGCCTTCCGAGCAGCCTGTGCCGGCCTCCGAGGCTCCAGGGGGTGGAGACCCTGCGCC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 90 bp | GAAATGTTCCTGGCGGAGATCGCGGGGCGGGTCCGGTGCTGCGTCTaGCGTCGAGGGGCTGAGCGCGGGTGCCTCAGGCGCGGTCGGCGC | + |
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Preference number: 5 (lower is better) Translates to: EMFLAEIAGRVRCCV*RRGAERGCLRRGRR Trigger: GCGCCGACCGCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACATTTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 90 bp | GCGGTTGAAATGTTCCTGGCGGAGATCGCGGGGCGGGTCCGGTGCTaGGTCTGCCGTCGAGGGGCTGAGCGCGGGTGCCTCAGGCGCGGT | + |
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Preference number: 5 (lower is better) Translates to: AVEMFLAEIAGRVRC*VCRRGAERGCLRRG Trigger: ACCGCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACATTTCAACCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 90 bp | CAGGCGGTTGAAATGTTCCTGGCGGAGATCGCGGGGCGGGTCCGGTaGTGCGTCTGCCGTCGAGGGGCTGAGCGCGGGTGCCTCAGGCGC | + |
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Preference number: 5 (lower is better) Translates to: QAVEMFLAEIAGRVR*CVCRRGAERGCLRR Trigger: GCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACATTTCAACCGCCTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 90 bp | GGGGCGGCGCTGGCCGCCGTCGTTTCTTGGCTGCTCCACGGGCTTTaGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTTGGAGTGTCCA | + |
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Preference number: 5 (lower is better) Translates to: GAALAAVVSWLLHGL*PRAVRALGANLECP Trigger: TGGACACTCCAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAGCCCGTGGAGCAGCCAAGAAACGACGGCGGCCAGCGCCGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 90 bp | CAGGATTTGAGACCCGGGGGCTCAGGGACAGCGGGTCCTCCCATCTaGCACTTCCACAGCGGGTGGGCAGGCGGCGGCTTGGCGTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: QDLRPGGSGTAGPPI*HFHSGWAGGGLASP Trigger: GGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCAGATGGGAGGACCCGCTGTCCCTGAGCCCCCGGGTCTCAAATCCTG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 90 bp | GTCCTCCCATCTGCCACTTCCACAGCGGGTGGGCAGGCGGCGGCTTaGCGTCTCCCTGGAGGCGAAGCGAGGAAGCCGGCCCTAGGTCTC | + |
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Preference number: 5 (lower is better) Translates to: VLPSATSTAGGQAAA*RLPGGEARKPALGL Trigger: GAGACCTAGGGCCGGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCAGATGGGAGGAC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 90 bp | GGCTCAGGGACAGCGGGTCCTCCCATCTGCCACTTCCACAGCGGGTaGGCAGGCGGCGGCTTGGCGTCTCCCTGGAGGCGAAGCGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: GSGTAGPPICHFHSG*AGGGLASPWRRSEE Trigger: TTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCAGATGGGAGGACCCGCTGTCCCTGAGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 90 bp | TGCCACTTCCACAGCGGGTGGGCAGGCGGCGGCTTGGCGTCTCCCTaGAGGCGAAGCGAGGAAGCCGGCCCTAGGTCTCCGTTCTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: CHFHSGWAGGGLASP*RRSEEAGPRSPFSS Trigger: GGAAGAGAACGGAGACCTAGGGCCGGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 90 bp | TCCACGGGCTTTGGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTTaGAGTGTCCAGGGCGAACCCCTTCGCGTAACACCAAAGTTTCGA | + |
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Preference number: 5 (lower is better) Translates to: STGFGRGPFGPSAQT*SVQGEPLRVTPKFR Trigger: TCGAAACTTTGGTGTTACGCGAAGGGGTTCGCCCTGGACACTCCAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAGCCCGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS TCA 90 bp | ACCCCTTCGCGTAACACCAAAGTTTCGAGCGGCGGATCAGGCGGTTaGAATGTTCCTGGCGGAGATCGCGGGGCGGGTCCGGTGCTGCGT | + |
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Preference number: 5 (lower is better) Translates to: TPSRNTKVSSGGSGG*NVPGGDRGAGPVLR Trigger: ACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACATTTCAACCGCCTGATCCGCCGCTCGAAACTTTGGTGTTACGCGAAGGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGGACTGAAGATCTTGACAAGGGAAAATCACCTGAACTTGGGGAGGGGGTGGGCAGGCGGCGGCTaGGCGTCTCCCTGGAGGCGA | + |
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Preference number: 5 (lower is better) Translates to: WLGLKILTRENHLNLGRGWAGGG*ASPWRR Trigger: TCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCA...CCCCCTCCCCAAGTTCAGGTGATTTTCCCTTGTCAAGATCTTCAGTCCCAGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CAA 90 bp | CAGGGAGCTGTCAATCACCTTCAAACCCCAACCACAGCCCCCACACCGCTAAACGCCCTCGGCGCAAACTaGGAGTGTCCAGGGCGAACC | + |
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Preference number: 5 (lower is better) Translates to: QGAVNHLQTPTTAPTPLNALGAN*ECPGRT Trigger: GGTTCGCCCTGGACACTCCAAGTTTGCGCCGAGGGC...GTTTAGCGGTGTGGGGGCTGTGGTTGGGGTTTGAAGGTGATTGACAGCTCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CAA 90 bp | TGGCTGGGACTGAAGATCTTGACAAGGGAAAATCACCTGAACTTGGGGAGGGGGTTGACCCACCAGGATTaGAGACCCGGGGGCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: WLGLKILTRENHLNLGRGLTHQD*RPGGSG Trigger: CCCTGAGCCCCCGGGTCTCAAATCCTGGTGGGTCAA...CCCCCTCCCCAAGTTCAGGTGATTTTCCCTTGTCAAGATCTTCAGTCCCAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS-3UTR CAA 90 bp | GACCCTCATTCAAACATGGAAACAACCGGTTTGTCCATCACCAAGGTCCGTCCCCGGCGGATCAGGCGGTaGAAATGTTCCTGGCGGAGA | + |
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Preference number: 5 (lower is better) Translates to: DPHSNMETTGLSITKVRPRRIRR*KCSWRR Trigger: TCTCCGCCAGGAACATTTCAACCGCCTGATCCGCCG...GGGACGGACCTTGGTGATGGACAAACCGGTTGTTTCCATGTTTGAATGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS TCA 72 bp | GGGGCGGGTCCGGTGCTGCGTCTGCCGTCGAGGGGCTaGGCGCGGGTGCCTCAGGCGCGGTCGGCGCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: GAGPVLRLPSRG*ARVPQARSAQG Trigger: ACCCTGCGCCGACCGCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 72 bp | CGGTGCTGCGTCTGCCGTCGAGGGGCTGAGCGCGGGTaGCTCAGGCGCGGTCGGCGCAGGGTCTCCACCCCC | + |
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Preference number: 6 (lower is better) Translates to: RCCVCRRGAERG*LRRGRRRVSTP Trigger: GGGGGTGGAGACCCTGCGCCGACCGCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 72 bp | CTGGCGGAGATCGCGGGGCGGGTCCGGTGCTGCGTCTaGCGTCGAGGGGCTGAGCGCGGGTGCCTCAGGCGC | + |
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Preference number: 6 (lower is better) Translates to: LAEIAGRVRCCV*RRGAERGCLRR Trigger: GCGCCTGAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 72 bp | CTCGATGTAGGAAGCGTCGGGACGGGCCGCCGTGGCTaGACACTGGGCGGGGGCGGCGCTGGCCGCCGTCGT | + |
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Preference number: 6 (lower is better) Translates to: LDVGSVGTGRRG*TLGGGGAGRRR Trigger: ACGACGGCGGCCAGCGCCGCCCCCGCCCAGTGTGCAGCCACGGCGGCCCGTCCCGACGCTTCCTACATCGAG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | CACTGGGCGGGGGCGGCGCTGGCCGCCGTCGTTTCTTaGCTGCTCCACGGGCTTTGGCCGCGGGCCGTTCGG | + |
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Preference number: 6 (lower is better) Translates to: HWAGAALAAVVS*LLHGLWPRAVR Trigger: CCGAACGGCCCGCGGCCAAAGCCCGTGGAGCAGCCAAGAAACGACGGCGGCCAGCGCCGCCCCCGCCCAGTG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 72 bp | ACACTGGGCGGGGGCGGCGCTGGCCGCCGTCGTTTCTaGGCTGCTCCACGGGCTTTGGCCGCGGGCCGTTCG | + |
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Preference number: 6 (lower is better) Translates to: TLGGGGAGRRRF*AAPRALAAGRS Trigger: CGAACGGCCCGCGGCCAAAGCCCGTGGAGCAGCCAAGAAACGACGGCGGCCAGCGCCGCCCCCGCCCAGTGT 75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 72 bp | ATGTTCCTGGCGGAGATCGCGGGGCGGGTCCGGTGCTaGGTCTGCCGTCGAGGGGCTGAGCGCGGGTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: MFLAEIAGRVRC*VCRRGAERGCL Trigger: GAGGCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | CTCCAGGCCCCAGGCCCAGGGAGGACGGCCGGGGTTTaGCAAGGGCGCAGAAGGCGAGGGCACGCAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LQAPGPGRTAGV*QGRRRRGHAGT Trigger: TGTGCCTGCGTGCCCTCGCCTTCTGCGCCCTTGCCAAACCCCGGCCGTCCTCCCTGGGCCTGGGGCCTGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | CACAGCGGGTGGGCAGGCGGCGGCTTGGCGTCTCCCTaGAGGCGAAGCGAGGAAGCCGGCCCTAGGTCTCCG | + |
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Preference number: 6 (lower is better) Translates to: HSGWAGGGLASP*RRSEEAGPRSP Trigger: CGGAGACCTAGGGCCGGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 90 bp | GGGGGCGGCGCTGGCCGCCGTCGTTTCTTGGCTGCTCCACGGGCTTaGGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTTGGAGTGTCC | + |
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Preference number: 6 (lower is better) Translates to: GGGAGRRRFLAAPRA*AAGRSGPRRKLGVS Trigger: GGACACTCCAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAGCCCGTGGAGCAGCCAAGAAACGACGGCGGCCAGCGCCGCCCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 72 bp | TTCCTCCTCTCCACCGCCTGGGCACACCGCGACGTCTaGATCCTCGCGGGCCGGGGAGCTCACGTCGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FLLSTAWAHRDV*ILAGRGAHVAR Trigger: CCGAGCGACGTGAGCTCCCCGGCCCGCGAGGATGCAGACGTCGCGGTGTGCCCAGGCGGTGGAGAGGAGGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS GCA 72 bp | GAAATGTTCCTGGCGGAGATCGCGGGGCGGGTCCGGTaGTGCGTCTGCCGTCGAGGGGCTGAGCGCGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: EMFLAEIAGRVR*CVCRRGAERGC Trigger: GCACCCGCGCTCAGCCCCTCGACGGCAGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACATTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | TCTGCCACTTCCACAGCGGGTGGGCAGGCGGCGGCTTaGCGTCTCCCTGGAGGCGAAGCGAGGAAGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SATSTAGGQAAA*RLPGGEARKPA Trigger: GGCCGGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCAGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | GGCAAGGGCGCAGAAGGCGAGGGCACGCAGGCACAGTaGGGAGAACTCTGGGGTCCCCCGACGCGGCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: GKGAEGEGTQAQ*GELWGPPTRLQ Trigger: CTGAAGCCGCGTCGGGGGACCCCAGAGTTCTCCCCACTGTGCCTGCGTGCCCTCGCCTTCTGCGCCCTTGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | CTGGCCGCCGTCGTTTCTTGGCTGCTCCACGGGCTTTaGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTTG | + |
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Preference number: 6 (lower is better) Translates to: LAAVVSWLLHGL*PRAVRALGANL Trigger: CAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAGCCCGTGGAGCAGCCAAGAAACGACGGCGGCCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 72 bp | GCTGGCCGCCGTCGTTTCTTGGCTGCTCCACGGGCTTaGGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: AGRRRFLAAPRA*AAGRSGPRRKL Trigger: AAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAGCCCGTGGAGCAGCCAAGAAACGACGGCGGCCAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 72 bp | ATCTGCCACTTCCACAGCGGGTGGGCAGGCGGCGGCTaGGCGTCTCCCTGGAGGCGAAGCGAGGAAGCCGGC | + |
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Preference number: 6 (lower is better) Translates to: ICHFHSGWAGGG*ASPWRRSEEAG Trigger: GCCGGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCAGAT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 90 bp | GGTCCTCCCATCTGCCACTTCCACAGCGGGTGGGCAGGCGGCGGCTaGGCGTCTCCCTGGAGGCGAAGCGAGGAAGCCGGCCCTAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GPPICHFHSGWAGGG*ASPWRRSEEAGPRS Trigger: AGACCTAGGGCCGGCTTCCTCGCTTCGCCTCCAGGGAGACGCCAAGCCGCCGCCTGCCCACCCGCTGTGGAAGTGGCAGATGGGAGGACC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 72 bp | CTTTGGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTaGGAGTGTCCAGGGCGAACCCCTTCGCGTAACACC | + |
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Preference number: 6 (lower is better) Translates to: LWPRAVRALGAN*ECPGRTPSRNT Trigger: GGTGTTACGCGAAGGGGTTCGCCCTGGACACTCCAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | TTTGGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTTaGAGTGTCCAGGGCGAACCCCTTCGCGTAACACCA | + |
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Preference number: 6 (lower is better) Translates to: FGRGPFGPSAQT*SVQGEPLRVTP Trigger: TGGTGTTACGCGAAGGGGTTCGCCCTGGACACTCCAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CAA 90 bp | CTCCACGGGCTTTGGCCGCGGGCCGTTCGGGCCCTCGGCGCAAACTaGGAGTGTCCAGGGCGAACCCCTTCGCGTAACACCAAAGTTTCG | + |
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Preference number: 6 (lower is better) Translates to: LHGLWPRAVRALGAN*ECPGRTPSRNTKVS Trigger: CGAAACTTTGGTGTTACGCGAAGGGGTTCGCCCTGGACACTCCAAGTTTGCGCCGAGGGCCCGAACGGCCCGCGGCCAAAGCCCGTGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS CCA 72 bp | AGTTTCGAGCGGCGGATCAGGCGGTTGAAATGTTCCTaGCGGAGATCGCGGGGCGGGTCCGGTGCTGCGTCT | + |
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Preference number: 6 (lower is better) Translates to: SFERRIRRLKCS*RRSRGGSGAAS Trigger: AGACGCAGCACCGGACCCGCCCCGCGATCTCCGCCAGGAACATTTCAACCGCCTGATCCGCCGCTCGAAACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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| CDS TCA 72 bp | CGTAACACCAAAGTTTCGAGCGGCGGATCAGGCGGTTaGAATGTTCCTGGCGGAGATCGCGGGGCGGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: RNTKVSSGGSGG*NVPGGDRGAGP Trigger: CGGACCCGCCCCGCGATCTCCGCCAGGAACATTTCAACCGCCTGATCCGCCGCTCGAAACTTTGGTGTTACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052281.6 |
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