Pregenerated sensors for EPN1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035203Ensembl transcript IDs: ENSMUST00000045277.7, ENSMUST00000098845.10, ENSMUST00000208634.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR TCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGAAGAGGGTGTAGTGTaGGTGGGCCCCAGGAGGGGG | + |
Preference number: 2 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSEEGVV*VGPRRG Trigger: CCCCCTCCTGGGGCCCACTCACACTACACCCTCTTC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR TCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGAAGAGGGTGTAGTGTaGGTGGGCCCCAGGAGGGGG | + |
Preference number: 2 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLEEGVV*VGPRRG Trigger: CCCCCTCCTGGGGCCCACTCACACTACACCCTCTTC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR TCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAATTGGGGAAGCCAGCTaGACCAGGCCTCCCTCCTAC | + |
Preference number: 2 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSIGEAS*TRPPSY Trigger: GTAGGAGGGAGGCCTGGTTCAGCTGGCTTCCCCAAT...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR TCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGATTGGGGAAGCCAGCTaGACCAGGCCTCCCTCCTAC | + |
Preference number: 2 (lower is better) Translates to: TKDSPGVPRERGGSNTDLIGEAS*TRPPSY Trigger: GTAGGAGGGAGGCCTGGTTCAGCTGGCTTCCCCAAT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR TCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGATTGGGGAAGCCAGCTaGACCAGGCCTCCCTCCTAC | + |
Preference number: 2 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRIGEAS*TRPPSY Trigger: GTAGGAGGGAGGCCTGGTTCAGCTGGCTTCCCCAAT...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACCAGGGAGCAGAAATTaGGGAAGCCAGCTGAACCAG | + |
Preference number: 2 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSPGSRN*GSQLNQ Trigger: CTGGTTCAGCTGGCTTCCCCAATTTCTGCTCCCTGG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGTTTCTCAAGGGGAGGTaGGGTGGGGACTTGGGAAGA | + |
Preference number: 2 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLFLKGR*GGDLGR Trigger: TCTTCCCAAGTCCCCACCCCACCTCCCCTTGAGAAA...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCCAGGGAGCAGAAATTaGGGAAGCCAGCTGAACCAG | + |
Preference number: 2 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRPGSRN*GSQLNQ Trigger: CTGGTTCAGCTGGCTTCCCCAATTTCTGCTCCCTGG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTTTCTCAAGGGGAGGTaGGGTGGGGACTTGGGAAGA | + |
Preference number: 2 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRFLKGR*GGDLGR Trigger: TCTTCCCAAGTCCCCACCCCACCTCCCCTTGAGAAA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGTTTCTCAAGGGGAGGTaGGGTGGGGACTTGGGAAGA | + |
Preference number: 2 (lower is better) Translates to: TKDSPGVPRERGGSNTDLFLKGR*GGDLGR Trigger: TCTTCCCAAGTCCCCACCCCACCTCCCCTTGAGAAA...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR TCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATATGCACTCACAATACTaGTCTCCCAGGGAGCAGAAA | + |
Preference number: 2 (lower is better) Translates to: ITKDSPGVPRERGGSNTDMHSQY*SPREQK Trigger: TTTCTGCTCCCTGGGAGATCAGTATTGTGAGTGCAT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR TCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTATGCACTCACAATACTaGTCTCCCAGGGAGCAGAAA | + |
Preference number: 2 (lower is better) Translates to: IITKDSPGVPRERGGSNTMHSQY*SPREQK Trigger: TTTCTGCTCCCTGGGAGATCAGTATTGTGAGTGCAT...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CAA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACCCAGGGAGCAGAAATaGGGGAAGCCAGCTGAACCA | + |
Preference number: 3 (lower is better) Translates to: AKIITKDSPGVPRERGGSPREQK*GKPAEP Trigger: TGGTTCAGCTGGCTTCCCCAATTTCTGCTCCCTGGG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CAA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCCCAGGGAGCAGAAATaGGGGAAGCCAGCTGAACCA | + |
Preference number: 3 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRPREQK*GKPAEP Trigger: TGGTTCAGCTGGCTTCCCCAATTTCTGCTCCCTGGG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR TCA 72 bp | ACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTaGTTTGGGGGTTGTCATGAGTTTAGAGGGAGGTGG | + |
Preference number: 3 (lower is better) Translates to: TRGAKGTRRLKH*FGGCHEFRGRW Trigger: CCACCTCCCTCTAAACTCATGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR-3UTR CAA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACCCAGGGAGCAGAAATaGGGGAAGCCAGCTGAACCA | + |
Preference number: 3 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKPREQK*GKPAEP Trigger: TGGTTCAGCTGGCTTCCCCAATTTCTGCTCCCTGGG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR GCA 72 bp | AAGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTaGCAAGGGAACGAGGAGGCTCAAACACTGATTTGG | + |
Preference number: 3 (lower is better) Translates to: KLPKSSPRIHQG*QGNEEAQTLIW Trigger: CCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACTCCGCCTCGGGAGGTaGTCCAGAGCCCACGGCTGC | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSLRLGR*SRAHGC Trigger: GCAGCCGTGGGCTCTGGACCACCTCCCGAGGCGGAG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACCTCCAGGGATCCCCTaGGGCTGGTGTGGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSPPGIP*GWCGGC Trigger: GCAGCCCCCACACCAGCCTCAGGGGATCCCTGGAGG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGGGCCCTGTAGGGGCTaGAGGCCTCCAGGGATCCCC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLGPCRG*RPPGIP Trigger: GGGGATCCCTGGAGGCCTGCAGCCCCTACAGGGCCC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGGGCCCCTCTCCAGCTaGAGGAGCTGGGGTCCCACC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSGPLSS*RSWGPT Trigger: GGTGGGACCCCAGCTCCTGCAGCTGGAGAGGGGCCC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCTCCGCCTCGGGAGGTaGTCCAGAGCCCACGGCTGC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLLRLGR*SRAHGC Trigger: GCAGCCGTGGGCTCTGGACCACCTCCCGAGGCGGAG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCCGCAGGACGGGGGCTaGTCGGCCTCCTCCTTGCTC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLPQDGG*SASSLL Trigger: GAGCAAGGAGGAGGCCGACCAGCCCCCGTCCTGCGG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCCTCCAGGGATCCCCTaGGGCTGGTGTGGGGGCTGC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRPPGIP*GWCGGC Trigger: GCAGCCCCCACACCAGCCTCAGGGGATCCCTGGAGG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGGAGCTGGTTCAGGGTaGGCGTTGCAGGGGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSGAGSG*ALQGVL Trigger: CAGCACCCCCTGCAACGCTCACCCTGAACCAGCTCC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACTCTGTGGCCATGCCTaGTCCGCCTCGGGAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSLCGHA*SASGGG Trigger: ACCACCTCCCGAGGCGGAGCAGGCATGGCCACAGAG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGGGGCCCTGTAGGGGCTaGAGGCCTCCAGGGATCCCC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRGPCRG*RPPGIP Trigger: GGGGATCCCTGGAGGCCTGCAGCCCCTACAGGGCCC...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGCCCCTCTCCAGCTaGAGGAGCTGGGGTCCCACC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLGPLSS*RSWGPT Trigger: GGTGGGACCCCAGCTCCTGCAGCTGGAGAGGGGCCC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACCAACTCCCCCGTGCTaGTCCCAGAGGTTGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSPTPPC*SQRLAG Trigger: CCCTGCCAACCTCTGGGAGCAGCACGGGGGAGTTGG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGGTGGGAGTTGGGGTTaGAGCAGGTGGGGGACTCCC | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSGGSWG*SRWGTP Trigger: GGGAGTCCCCCACCTGCTGCAACCCCAACTCCCACC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCCGCAGGACGGGGGCTaGTCGGCCTCCTCCTTGCTC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRPQDGG*SASSLL Trigger: GAGCAAGGAGGAGGCCGACCAGCCCCCGTCCTGCGG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGGAGCTGGTTCAGGGTaGGCGTTGCAGGGGGTGCTG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSGAGSG*ALQGVL Trigger: CAGCACCCCCTGCAACGCTCACCCTGAACCAGCTCC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCTGGGGGCACAGGACTaGGACGGAGCTGGTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLLGAQD*DGAGSG Trigger: CCCTGAACCAGCTCCGTCTCAGTCCTGTGCCCCCAG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGGCCCCAGGGATCATTaGTTGTGGCCTCGCGGACCT | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSGPRDH*LWPRGP Trigger: AGGTCCGCGAGGCCACAAGCAATGATCCCTGGGGCC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACTCTGTGGCCATGCCTaGTCCGCCTCGGGAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSLCGHA*SASGGG Trigger: ACCACCTCCCGAGGCGGAGCAGGCATGGCCACAGAG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGCTGCTCTGTGGCCATaGCTGCTCCGCCTCGGGAGG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLAALWP*LLRLGR Trigger: CCTCCCGAGGCGGAGCAGGCATGGCCACAGAGCAGC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGGCTGCTCTGTGGCCATaGCTGCTCCGCCTCGGGAGG | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRAALWP*LLRLGR Trigger: CCTCCCGAGGCGGAGCAGGCATGGCCACAGAGCAGC...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAACTCCTCCTCCCCGCTaGTCTGTGGCCATGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSTPPPR*SVAMPA Trigger: AGCAGGCATGGCCACAGAGCAGCGGGGAGGAGGAGT...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGGCTGGTGTGGGGGCTaGACCACCCCAAGGATCAGC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSGWCGG*TTPRIS Trigger: GCTGATCCTTGGGGTGGTGCAGCCCCCACACCAGCC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAGGGCCCTGTAGGGGCTaGAGGCCTCCAGGGATCCCC | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKGPCRG*RPPGIP Trigger: GGGGATCCCTGGAGGCCTGCAGCCCCTACAGGGCCC...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAGGGCCCCTCTCCAGCTaGAGGAGCTGGGGTCCCACC | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKGPLSS*RSWGPT Trigger: GGTGGGACCCCAGCTCCTGCAGCTGGAGAGGGGCCC...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACCAACTCCCCCGTGCTaGTCCCAGAGGTTGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSPTPPC*SQRLAG Trigger: CCCTGCCAACCTCTGGGAGCAGCACGGGGGAGTTGG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGGTGGGAGTTGGGGTTaGAGCAGGTGGGGGACTCCC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLGGSWG*SRWGTP Trigger: GGGAGTCCCCCACCTGCTGCAACCCCAACTCCCACC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACTCCGCCTCGGGAGGTaGTCCAGAGCCCACGGCTGC | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKLRLGR*SRAHGC Trigger: GCAGCCGTGGGCTCTGGACCACCTCCCGAGGCGGAG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAGGGCCAGCTGGAGCTaGACGTCATCCTCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSRASWS*TSSSGP Trigger: CGGCCCTGAGGATGACGTCCAGCTCCAGCTGGCCCT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGCTGCTCCCAGAGGTTaGCAGGGCAGTGCGGAGTCG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSAAPRG*QGSAES Trigger: CGACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGTGGTGGTGTGGGGCCTaGTCGGCTCACCAGCGAGTC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLWWCGA*SAHQRV Trigger: GACTCGCTGGTGAGCCGACCAGGCCCCACACCACCA...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGGAAGCCTTGGATCCTaGTGGTGTGGGGCCTGGTCG | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSGSLGS*WCGAWS Trigger: CGACCAGGCCCCACACCACCAGGATCCAAGGCTTCC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCATGGCGCTCCAGGAACTaGGGGCACAGGACTGAGACG | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSWRSRN*GHRTET Trigger: CGTCTCAGTCCTGTGCCCCCAGTTCCTGGAGCGCCA...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAAGATGGGGGCCCACTaGCAGGAGCCCCACCATCAG | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLKMGAH*QEPHHQ Trigger: CTGATGGTGGGGCTCCTGTCAGTGGGCCCCCATCTT...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGCTGGAAAGGATTGGTaGCAGAGGGGCCTGTGGGCG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSAGKDW*QRGLWA Trigger: CGCCCACAGGCCCCTCTGTCACCAATCCTTTCCAGC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGCTGGAAAGGATTGGTaGCAGAGGGGCCTGTGGGCG | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLAGKDW*QRGLWA Trigger: CGCCCACAGGCCCCTCTGTCACCAATCCTTTCCAGC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTCTGGGGGCACAGGACTaGGACGGAGCTGGTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTLGAQD*DGAGSG Trigger: CCCTGAACCAGCTCCGTCTCAGTCCTGTGCCCCCAG...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGGCCCCAGGGATCATTaGTTGTGGCCTCGCGGACCT | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLGPRDH*LWPRGP Trigger: AGGTCCGCGAGGCCACAAGCAATGATCCCTGGGGCC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAGCTGCTCTGTGGCCATaGCTGCTCCGCCTCGGGAGG | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKAALWP*LLRLGR Trigger: CCTCCCGAGGCGGAGCAGGCATGGCCACAGAGCAGC...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGCTGGTGTGGGGGCTaGACCACCCCAAGGATCAGC | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTGWCGG*TTPRIS Trigger: GCTGATCCTTGGGGTGGTGCAGCCCCCACACCAGCC...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGAAAGCCGGGGCAGGTaGCCAGGGGTCAGAAGATGG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSESRGR*PGVRRW Trigger: CCATCTTCTGACCCCTGGGCACCTGCCCCGGCTTTC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATCCAACTCCCCCGTGCTaGTCCCAGAGGTTGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDPTPPC*SQRLAG Trigger: CCCTGCCAACCTCTGGGAGCAGCACGGGGGAGTTGG...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAAGCAGGCACCTCTCCTaGGAGCAACTCCAACTCCCC | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSSRHLS*EQLQLP Trigger: GGGGAGTTGGAGTTGCTCGCAGGAGAGGTGCCTGCT...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACCCACTCATGTCGAATaGCCCAGGGCTGCGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSPTHVE*PRAASR Trigger: CCTGCTCGCAGCCCTGGGGCATTCGACATGAGTGGG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGTGGGAGTTGGGGTTaGAGCAGGTGGGGGACTCCC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLGGSWG*SRWGTP Trigger: GGGAGTCCCCCACCTGCTGCAACCCCAACTCCCACC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTAGGGCCAGCTGGAGCTaGACGTCATCCTCAGGGCCG | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTRASWS*TSSSGP Trigger: CGGCCCTGAGGATGACGTCCAGCTCCAGCTGGCCCT...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCCAAGGATCAGCAGCTaGAGGGACAGCAGGTCCCCC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLPRISS*RDSRSP Trigger: GGGGGACCTGCTGTCCCTCCAGCTGCTGATCCTTGG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACCAAGGATCAGCAGCTaGAGGGACAGCAGGTCCCCC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSPRISS*RDSRSP Trigger: GGGGGACCTGCTGTCCCTCCAGCTGCTGATCCTTGG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCATCCAGCTGCAGGAGCTaGGGTCCCACCCCAAGGATC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSSSCRS*GPTPRI Trigger: GATCCTTGGGGTGGGACCCCAGCTCCTGCAGCTGGA...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCTGCTCCCAGAGGTTaGCAGGGCAGTGCGGAGTCG | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTAAPRG*QGSAES Trigger: CGACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGC...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTTGGTGGTGTGGGGCCTaGTCGGCTCACCAGCGAGTC | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTWWCGA*SAHQRV Trigger: GACTCGCTGGTGAGCCGACCAGGCCCCACACCACCA...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGGAAGCCTTGGATCCTaGTGGTGTGGGGCCTGGTCG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSGSLGS*WCGAWS Trigger: CGACCAGGCCCCACACCACCAGGATCCAAGGCTTCC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGTGGCGCTCCAGGAACTaGGGGCACAGGACTGAGACG | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLWRSRN*GHRTET Trigger: CGTCTCAGTCCTGTGCCCCCAGTTCCTGGAGCGCCA...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGAAGATGGGGGCCCACTaGCAGGAGCCCCACCATCAG | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRKMGAH*QEPHHQ Trigger: CTGATGGTGGGGCTCCTGTCAGTGGGCCCCCATCTT...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATAAGATGGGGGCCCACTaGCAGGAGCCCCACCATCAG | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDKMGAH*QEPHHQ Trigger: CTGATGGTGGGGCTCCTGTCAGTGGGCCCCCATCTT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATGCTGGAAAGGATTGGTaGCAGAGGGGCCTGTGGGCG | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDAGKDW*QRGLWA Trigger: CGCCCACAGGCCCCTCTGTCACCAATCCTTTCCAGC...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACTGGGGGCACAGGACTaGGACGGAGCTGGTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKLGAQD*DGAGSG Trigger: CCCTGAACCAGCTCCGTCTCAGTCCTGTGCCCCCAG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGGGCCCCAGGGATCATTaGTTGTGGCCTCGCGGACCT | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRGPRDH*LWPRGP Trigger: AGGTCCGCGAGGCCACAAGCAATGATCCCTGGGGCC...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACTCTGTGGCCATGCCTaGTCCGCCTCGGGAGGTGGT | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKLCGHA*SASGGG Trigger: ACCACCTCCCGAGGCGGAGCAGGCATGGCCACAGAG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATACTCCTCCTCCCCGCTaGTCTGTGGCCATGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDTPPPR*SVAMPA Trigger: AGCAGGCATGGCCACAGAGCAGCGGGGAGGAGGAGT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGACTCCTCCTCCCCGCTaGTCTGTGGCCATGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLTPPPR*SVAMPA Trigger: AGCAGGCATGGCCACAGAGCAGCGGGGAGGAGGAGT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAGGCTGGTGTGGGGGCTaGACCACCCCAAGGATCAGC | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKGWCGG*TTPRIS Trigger: GCTGATCCTTGGGGTGGTGCAGCCCCCACACCAGCC...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAAAGCCGGGGCAGGTaGCCAGGGGTCAGAAGATGG | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTESRGR*PGVRRW Trigger: CCATCTTCTGACCCCTGGGCACCTGCCCCGGCTTTC...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGAAAGCCGGGGCAGGTaGCCAGGGGTCAGAAGATGG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLESRGR*PGVRRW Trigger: CCATCTTCTGACCCCTGGGCACCTGCCCCGGCTTTC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACAACTGCAGTGCCGTTaGTGCTGGGCTTTGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSQLQCR*CWALQV Trigger: CACCTGCAAAGCCCAGCAGCAACGGCACTGCAGTTG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCCCACTCATGTCGAATaGCCCAGGGCTGCGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLPTHVE*PRAASR Trigger: CCTGCTCGCAGCCCTGGGGCATTCGACATGAGTGGG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTCCCACTCATGTCGAATaGCCCAGGGCTGCGAGCAGG | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTPTHVE*PRAASR Trigger: CCTGCTCGCAGCCCTGGGGCATTCGACATGAGTGGG...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGAGCGTTGCAGGGGGTaGTGGCTGGAAAGGATTGGT | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSERCRG*WLERIG Trigger: ACCAATCCTTTCCAGCCAGCACCCCCTGCAACGCTC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACTGCTGCAGTGCCGTTaGTGCTGGGCTTTGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSLLQCR*CWALQV Trigger: CACCTGCAAAGCCCAGCAGCAACGGCACTGCAGCAG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAAAGCCCCCAACTGCTaGAGTGCCGTTGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLKAPNC*SAVAAG Trigger: CCCAGCAGCAACGGCACTGCAGCAGTTGGGGGCTTT...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
||
CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAATAGCCAGGGCCAGCTaGAGCTGCAACTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSIARAS*SCNSSS Trigger: GGAGGAGGAGTTGCAGCTCCAGCTGGCCCTGGCTAT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
||
CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCCAAGGATCAGCAGCTaGAGGGACAGCAGGTCCCCC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLPRISS*RDSRSP Trigger: GGGGGACCTGCTGTCCCTCCAGCTGCTGATCCTTGG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTCCAGCTGCAGGAGCTaGGGTCCCACCCCAAGGATC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRSSCRS*GPTPRI Trigger: GATCCTTGGGGTGGGACCCCAGCTCCTGCAGCTGGA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTCCAGCTGCAGGAGCTaGGGTCCCACCCCAAGGATC | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDSSCRS*GPTPRI Trigger: GATCCTTGGGGTGGGACCCCAGCTCCTGCAGCTGGA...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
||
CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACAGTGCCGTTGCTGCTaGGCTTTGCAGGTGAGCCTC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSQCRCC*ALQVSL Trigger: GAGGCTCACCTGCAAAGCCCAGCAGCAACGGCACTG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAATGGTGGTGTGGGGCCTaGTCGGCTCACCAGCGAGTC | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKWWCGA*SAHQRV Trigger: GACTCGCTGGTGAGCCGACCAGGCCCCACACCACCA...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGAAGCCTTGGATCCTaGTGGTGTGGGGCCTGGTCG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLGSLGS*WCGAWS Trigger: CGACCAGGCCCCACACCACCAGGATCCAAGGCTTCC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
||
CDS-3UTR CCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGCAGGGGGTGCTGGCTaGAAAGGATTGGTGACAGAG | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSAGGAG*KGLVTE Trigger: CTCTGTCACCAATCCTTTCCAGCCAGCACCCCCTGC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACGTTGCAGGGGGTGCTaGCTGGAAAGGATTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSRCRGC*LERIGD Trigger: GTCACCAATCCTTTCCAGCCAGCACCCCCTGCAACG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTGGCGCTCCAGGAACTaGGGGCACAGGACTGAGACG | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDWRSRN*GHRTET Trigger: CGTCTCAGTCCTGTGCCCCCAGTTCCTGGAGCGCCA...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
||
CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAGAGATGTAGGTGGGTaGCGCTCCAGGAACTGGGGG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSRDVGG*RSRNWG Trigger: CCCCCAGTTCCTGGAGCGCCACCCACCTACATCTCT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCATCTTGCCGTGGTCATTaGGCCGCTTCCAGATCATGC | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSSCRGH*AASRSC Trigger: GCATGATCTGGAAGCGGCTCAATGACCACGGCAAGA...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAGCAAAGCCACCAGCTaGTTGGCCTTCTCCCGCACA | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLSKATS*LAFSRT Trigger: TGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTTTGCT...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGGCCGTGGCAGTCTGTaGCAGCTTCTCCTTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSGRGSL*QLLLGL Trigger: AAGACCAAGGAGAAGCTGGCACAGACTGCCACGGCC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGAGATGACTCCTCCTTaGCCCCAGTCTCCCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSEMTPP*PQSPSC Trigger: GCAAGAGGGAGACTGGGGGCAAGGAGGAGTCATCTC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGAGATGACTCCTCCTTaGCCCCAGTCTCCCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLEMTPP*PQSPSC Trigger: GCAAGAGGGAGACTGGGGGCAAGGAGGAGTCATCTC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTCTGCAGTGCCGTTGCTaGTGGGCTTTGCAGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTLQCRC*WALQVS Trigger: GCTCACCTGCAAAGCCCAGCAGCAACGGCACTGCAG...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCTGCAGTGCCGTTGCTaGTGGGCTTTGCAGGTGAGC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLLQCRC*WALQVS Trigger: GCTCACCTGCAAAGCCCAGCAGCAACGGCACTGCAG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGAGCAGGCACCTCTCCTaGGAGCAACTCCAACTCCCC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLSRHLS*EQLQLP Trigger: GGGGAGTTGGAGTTGCTCGCAGGAGAGGTGCCTGCT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATAGCAGGCACCTCTCCTaGGAGCAACTCCAACTCCCC | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDSRHLS*EQLQLP Trigger: GGGGAGTTGGAGTTGCTCGCAGGAGAGGTGCCTGCT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGAGCGTTGCAGGGGGTaGTGGCTGGAAAGGATTGGT | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSERCRG*WLERIG Trigger: ACCAATCCTTTCCAGCCAGCACCCCCTGCAACGCTC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACATGAGGGAGCTGGATaGGCCCCAGGGATCATTGCT | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSHEGAG*APGIIA Trigger: AGCAATGATCCCTGGGGCCCATCCAGCTCCCTCATG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTATAGCCAGGGCCAGCTaGAGCTGCAACTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTIARAS*SCNSSS Trigger: GGAGGAGGAGTTGCAGCTCCAGCTGGCCCTGGCTAT...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGATAGCCAGGGCCAGCTaGAGCTGCAACTCCTCCTCC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLIARAS*SCNSSS Trigger: GGAGGAGGAGTTGCAGCTCCAGCTGGCCCTGGCTAT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCAGTGCCGTTGCTGCTaGGCTTTGCAGGTGAGCCTC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRQCRCC*ALQVSL Trigger: GAGGCTCACCTGCAAAGCCCAGCAGCAACGGCACTG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAATGGGTTGGAAGCCTTaGATCCTGGTGGTGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSMGWKP*ILVVWG Trigger: GCCCCACACCACCAGGATCCAAGGCTTCCAACCCAT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCGTTGCAGGGGGTGCTaGCTGGAAAGGATTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLRCRGC*LERIGD Trigger: GTCACCAATCCTTTCCAGCCAGCACCCCCTGCAACG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGGGACTGAGACGGAGCTaGTTCAGGGTGAGCGTTGCA | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLGLRRS*FRVSVA Trigger: TGCAACGCTCACCCTGAACCAGCTCCGTCTCAGTCC...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTAGAGATGTAGGTGGGTaGCGCTCCAGGAACTGGGGG | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTRDVGG*RSRNWG Trigger: CCCCCAGTTCCTGGAGCGCCACCCACCTACATCTCT...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAGAGGAGAGATGTAGGTaGGTGGCGCTCCAGGAACTG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSEERCR*VALQEL Trigger: CAGTTCCTGGAGCGCCACCCACCTACATCTCTCCTC...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTGGCCTCGCGGACCTTaGTCTCAGCCTCTGAGTAGT | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDWPRGP*SQPLSS Trigger: ACTACTCAGAGGCTGAGATCAAGGTCCGCGAGGCCA...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTGGCCTCGCGGACCTTaGTCTCAGCCTCTGAGTAGT | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRWPRGP*SQPLSS Trigger: ACTACTCAGAGGCTGAGATCAAGGTCCGCGAGGCCA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAGAGTCGGTCGAAGTCTaGGAACTCATCAGGCTCTGT | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSESVEV*ELIRLC Trigger: ACAGAGCCTGATGAGTTCTCAGACTTCGACCGACTC...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGAGCAAAGCCACCAGCTaGTTGGCCTTCTCCCGCACA | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLSKATS*LAFSRT Trigger: TGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTTTGCT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCATCCTCTATTGCCATCTaGAGCCTCAGGTCATCCCCA | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSSSIAI*SLRSSP Trigger: TGGGGATGACCTGAGGCTGCAGATGGCAATAGAGGA...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAGATGACTCCTCCTTaGCCCCAGTCTCCCTCTTGC | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTEMTPP*PQSPSC Trigger: GCAAGAGGGAGACTGGGGGCAAGGAGGAGTCATCTC...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCAACTGCAGTGCCGTTaGTGCTGGGCTTTGCAGGTG | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRQLQCR*CWALQV Trigger: CACCTGCAAAGCCCAGCAGCAACGGCACTGCAGTTG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAGCGTTGCAGGGGGTaGTGGCTGGAAAGGATTGGT | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTERCRG*WLERIG Trigger: ACCAATCCTTTCCAGCCAGCACCCCCTGCAACGCTC...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACCCCAACTGCTGCAGTaGCGTTGCTGCTGGGCTTTG | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKPQLLQ*RCCWAL Trigger: CAAAGCCCAGCAGCAACGGCACTGCAGCAGTTGGGG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGGTCAAAGCCCCCAACTaGTGCAGTGCCGTTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRVKAPN*CSAVAA Trigger: AGCAGCAACGGCACTGCAGCAGTTGGGGGCTTTGAC...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCATGAGGGAGCTGGATaGGCCCCAGGGATCATTGCT | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLHEGAG*APGIIA Trigger: AGCAATGATCCCTGGGGCCCATCCAGCTCCCTCATG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
||
CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGATGGGTTGGAAGCCTTaGATCCTGGTGGTGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRMGWKP*ILVVWG Trigger: GCCCCACACCACCAGGATCCAAGGCTTCCAACCCAT...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATATGGGTTGGAAGCCTTaGATCCTGGTGGTGTGGGGC | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDMGWKP*ILVVWG Trigger: GCCCCACACCACCAGGATCCAAGGCTTCCAACCCAT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGCAGGGGGTGCTGGCTaGAAAGGATTGGTGACAGAG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLAGGAG*KGLVTE Trigger: CTCTGTCACCAATCCTTTCCAGCCAGCACCCCCTGC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCGTTGCAGGGGGTGCTaGCTGGAAAGGATTGGTGAC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRRCRGC*LERIGD Trigger: GTCACCAATCCTTTCCAGCCAGCACCCCCTGCAACG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGACTGAGACGGAGCTaGTTCAGGGTGAGCGTTGCA | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLGLRRS*FRVSVA Trigger: TGCAACGCTCACCCTGAACCAGCTCCGTCTCAGTCC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGAGGAGAGATGTAGGTaGGTGGCGCTCCAGGAACTG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLEERCR*VALQEL Trigger: CAGTTCCTGGAGCGCCACCCACCTACATCTCTCCTC...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGGAGGAGAGATGTAGGTaGGTGGCGCTCCAGGAACTG | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRREERCR*VALQEL Trigger: CAGTTCCTGGAGCGCCACCCACCTACATCTCTCCTC...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGTCTTGCCGTGGTCATTaGGCCGCTTCCAGATCATGC | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLSCRGH*AASRSC Trigger: GCATGATCTGGAAGCGGCTCAATGACCACGGCAAGA...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTCTTGCCGTGGTCATTaGGCCGCTTCCAGATCATGC | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRSCRGH*AASRSC Trigger: GCATGATCTGGAAGCGGCTCAATGACCACGGCAAGA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCATCACACCCTGGTCCTTaGCATCACGGTCCACATACT | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSSHPGP*HHGPHT Trigger: AGTATGTGGACCGTGATGGCAAGGACCAGGGTGTGA...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAAGCAAAGCCACCAGCTaGTTGGCCTTCTCCCGCACA | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKSKATS*LAFSRT Trigger: TGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTTTGCT...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAGGCCGTGGCAGTCTGTaGCAGCTTCTCCTTGGTCTT | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKGRGSL*QLLLGL Trigger: AAGACCAAGGAGAAGCTGGCACAGACTGCCACGGCC...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACATGAGGGAGCTGGATaGGCCCCAGGGATCATTGCT | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKHEGAG*APGIIA Trigger: AGCAATGATCCCTGGGGCCCATCCAGCTCCCTCATG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGAAGCCACCAGCTGCTTaGCCTTCTCCCGCACATTCA | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRKPPAA*PSPAHS Trigger: TGAATGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTT...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGAAGCCACCAGCTGCTTaGCCTTCTCCCGCACATTCA | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLKPPAA*PSPAHS Trigger: TGAATGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAACTAAGGGCCAGCTaGAGCTGGACGTCATCCTCA | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSKLRAS*SWTSSS Trigger: TGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGTCCGCTTGGAAGGAATaGGTTGGAAGCCTTGGATCC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLSAWKE*VGSLGS Trigger: GGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGA...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAGCAGGGGGTGCTGGCTaGAAAGGATTGGTGACAGAG | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKAGGAG*KGLVTE Trigger: CTCTGTCACCAATCCTTTCCAGCCAGCACCCCCTGC...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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3UTR CAA 72 bp | GGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTaGGGGGTTGTCATGAGTTTAGAGGGAGGTGGAATG | + |
Preference number: 4 (lower is better) Translates to: GVPRERGGSNTD*GVVMSLEGGGM Trigger: CATTCCACCTCCCTCTAAACTCATGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACCACAACATTGTAGGTaGGGTCAGCAATCTCTGACA | + |
Preference number: 4 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSPQHCR*GQQSLT Trigger: TGTCAGAGATTGCTGACCTCACCTACAATGTTGTGG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCATCAGCAAGATCCATaGGAGATGACTCCTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLHQQDP*EMTPPC Trigger: GCAAGGAGGAGTCATCTCTCATGGATCTTGCTGATG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATGAGTCGGTCGAAGTCTaGGAACTCATCAGGCTCTGT | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDESVEV*ELIRLC Trigger: ACAGAGCCTGATGAGTTCTCAGACTTCGACCGACTC...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTTCACACCCTGGTCCTTaGCATCACGGTCCACATACT | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTSHPGP*HHGPHT Trigger: AGTATGTGGACCGTGATGGCAAGGACCAGGGTGTGA...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTCACACCCTGGTCCTTaGCATCACGGTCCACATACT | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRSHPGP*HHGPHT Trigger: AGTATGTGGACCGTGATGGCAAGGACCAGGGTGTGA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACGCTCTTCCTTATCGTaGTCCTCTCGGCTCAAACTA | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSRSSLS*SSRLKL Trigger: TAGTTTGAGCCGAGAGGAGCACGATAAGGAAGAGCG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTTCCTCTATTGCCATCTaGAGCCTCAGGTCATCCCCA | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTSSIAI*SLRSSP Trigger: TGGGGATGACCTGAGGCTGCAGATGGCAATAGAGGA...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTCCTCTATTGCCATCTaGAGCCTCAGGTCATCCCCA | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDSSIAI*SLRSSP Trigger: TGGGGATGACCTGAGGCTGCAGATGGCAATAGAGGA...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCCCCAGTCTCCCTCTTaGTCTCCTCTATTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRPQSPS*SPLLPS Trigger: AGATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCCCCAGTCTCCCTCTTaGTCTCCTCTATTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLPQSPS*SPLLPS Trigger: AGATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTAAACTAAGGGCCAGCTaGAGCTGGACGTCATCCTCA | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTKLRAS*SWTSSS Trigger: TGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTT...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCATTGGAAGGAATGGGTTaGAAGCCTTGGATCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: AKIITKDSPGVPRERGGSLEGMG*KPWILV Trigger: CACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAA...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTCCGCTTGGAAGGAATaGGTTGGAAGCCTTGGATCC | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDSAWKE*VGSLGS Trigger: GGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGA...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCCACAACATTGTAGGTaGGGTCAGCAATCTCTGACA | + |
Preference number: 4 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLPQHCR*GQQSLT Trigger: TGTCAGAGATTGCTGACCTCACCTACAATGTTGTGG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTCATCAGCAAGATCCATaGGAGATGACTCCTCCTTGC | + |
Preference number: 4 (lower is better) Translates to: IITKDSPGVPRERGGSNTHQQDP*EMTPPC Trigger: GCAAGGAGGAGTCATCTCTCATGGATCTTGCTGATG...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACCCCAGTCTCCCTCTTaGTCTCCTCTATTGCCATCT | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKPQSPS*SPLLPS Trigger: AGATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAAAACTAAGGGCCAGCTaGAGCTGGACGTCATCCTCA | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKKLRAS*SWTSSS Trigger: TGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTT...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGTTGGAAGGAATGGGTTaGAAGCCTTGGATCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLLEGMG*KPWILV Trigger: CACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAA...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGAAGGAATGGGTTaGAAGCCTTGGATCCTGGTG | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDLEGMG*KPWILV Trigger: CACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAA...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCTTGATCTCAGCCTCTaGGTAGTTGTGGACGATATT | + |
Preference number: 4 (lower is better) Translates to: TKDSPGVPRERGGSNTDLLDLSL*VVVDDI Trigger: AATATCGTCCACAACTACTCAGAGGCTGAGATCAAG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTTGATCTCAGCCTCTaGGTAGTTGTGGACGATATT | + |
Preference number: 4 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRLDLSL*VVVDDI Trigger: AATATCGTCCACAACTACTCAGAGGCTGAGATCAAG...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR TCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACTTGATCTCAGCCTCTaGGTAGTTGTGGACGATATT | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKLDLSL*VVVDDI Trigger: AATATCGTCCACAACTACTCAGAGGCTGAGATCAAG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATCATACATGTTCTCTTTaGACTGTTGTGATACACGCT | + |
Preference number: 4 (lower is better) Translates to: ITKDSPGVPRERGGSNTDHTCSL*TVVIHA Trigger: AGCGTGTATCACAACAGTGCAAAGAGAACATGTATG...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR GCA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACATACATGTTCTCTTTaGACTGTTGTGATACACGCT | + |
Preference number: 4 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKHTCSL*TVVIHA Trigger: AGCGTGTATCACAACAGTGCAAAGAGAACATGTATG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 90 bp | CCCACTCATGTCGAATGCCCCAGGGCTGCGAGCAGGCACCTCTCCTaGGAGCAACTCCAACTCCCCCGTGCTGCTCCCAGAGGTTGGCAG | + |
Preference number: 5 (lower is better) Translates to: PTHVECPRAASRHLS*EQLQLPRAAPRGWQ Trigger: CTGCCAACCTCTGGGAGCAGCACGGGGGAGTTGGAGTTGCTCGCAGGAGAGGTGCCTGCTCGCAGCCCTGGGGCATTCGACATGAGTGGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 90 bp | TCCTTATCGTGCTCCTCTCGGCTCAAACTAAGGGCCAGCTGGAGCTaGACGTCATCCTCAGGGCCGCAGGACGGGGGCTGGTCGGCCTCC | + |
Preference number: 5 (lower is better) Translates to: SLSCSSRLKLRASWS*TSSSGPQDGGWSAS Trigger: GGAGGCCGACCAGCCCCCGTCCTGCGGCCCTGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAGGAGCACGATAAGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 90 bp | CACAGGACTGAGACGGAGCTGGTTCAGGGTGAGCGTTGCAGGGGGTaGTGGCTGGAAAGGATTGGTGACAGAGGGGCCTGTGGGCGGAGC | + |
Preference number: 5 (lower is better) Translates to: HRTETELVQGERCRG*WLERIGDRGACGRS Trigger: GCTCCGCCCACAGGCCCCTCTGTCACCAATCCTTTCCAGCCAGCACCCCCTGCAACGCTCACCCTGAACCAGCTCCGTCTCAGTCCTGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 90 bp | CGCTCTTCCTTATCGTGCTCCTCTCGGCTCAAACTAAGGGCCAGCTaGAGCTGGACGTCATCCTCAGGGCCGCAGGACGGGGGCTGGTCG | + |
Preference number: 5 (lower is better) Translates to: RSSLSCSSRLKLRAS*SWTSSSGPQDGGWS Trigger: CGACCAGCCCCCGTCCTGCGGCCCTGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAGGAGCACGATAAGGAAGAGCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 90 bp | GGGCGGAGCTCCGCTTGGAAGGAATGGGTTGGAAGCCTTGGATCCTaGTGGTGTGGGGCCTGGTCGGCTCACCAGCGAGTCCAGATCCAC | + |
Preference number: 5 (lower is better) Translates to: GRSSAWKEWVGSLGS*WCGAWSAHQRVQIH Trigger: GTGGATCTGGACTCGCTGGTGAGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 90 bp | ATTGGTGACAGAGGGGCCTGTGGGCGGAGCTCCGCTTGGAAGGAATaGGTTGGAAGCCTTGGATCCTGGTGGTGTGGGGCCTGGTCGGCT | + |
Preference number: 5 (lower is better) Translates to: IGDRGACGRSSAWKE*VGSLGSWWCGAWSA Trigger: AGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCCCCTCTGTCACCAAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 90 bp | CGGAGCTCCGCTTGGAAGGAATGGGTTGGAAGCCTTGGATCCTGGTaGTGTGGGGCCTGGTCGGCTCACCAGCGAGTCCAGATCCACAAG | + |
Preference number: 5 (lower is better) Translates to: RSSAWKEWVGSLGSW*CGAWSAHQRVQIHK Trigger: CTTGTGGATCTGGACTCGCTGGTGAGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 90 bp | CTGGAAAGGATTGGTGACAGAGGGGCCTGTGGGCGGAGCTCCGCTTaGAAGGAATGGGTTGGAAGCCTTGGATCCTGGTGGTGTGGGGCC | + |
Preference number: 5 (lower is better) Translates to: LERIGDRGACGRSSA*KEWVGSLGSWWCGA Trigger: GGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCCCCTCTGTCACCAATCCTTTCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS TCA 90 bp | GCTGCTCCCAGAGGTTGGCAGGGCAGTGCGGAGTCGGTCGAAGTCTaGGAACTCATCAGGCTCTGTGTCAAAGCCCCCAACTGCAGTGCC | + |
Preference number: 5 (lower is better) Translates to: AAPRGWQGSAESVEV*ELIRLCVKAPNCSA Trigger: GGCACTGCAGTTGGGGGCTTTGACACAGAGCCTGATGAGTTCTCAGACTTCGACCGACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 |
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CDS TCA 90 bp | GCTGCTCCCAGAGGTTGGCAGGGCAGTGCGGAGTCGGTCGAAGTCTaGGAACTCATCAGGCTCTGTGTCAAAGCCCCCAACTGCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: AAPRGWQGSAESVEV*ELIRLCVKAPNCCS Trigger: ACTGCAGCAGTTGGGGGCTTTGACACAGAGCCTGATGAGTTCTCAGACTTCGACCGACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
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CDS GCA 90 bp | GCAACTCCAACTCCCCCGTGCTGCTCCCAGAGGTTGGCAGGGCAGTaGGGAGTCGGTCGAAGTCTGAGAACTCATCAGGCTCTGTGTCAA | + |
Preference number: 5 (lower is better) Translates to: ATPTPPCCSQRLAGQ*GVGRSLRTHQALCQ Trigger: TTGACACAGAGCCTGATGAGTTCTCAGACTTCGACCGACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGCACGGGGGAGTTGGAGTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAGCTTCTCCTTGGTCTaGAGCGCGTGGGCGCGCTCC | + |
Preference number: 5 (lower is better) Translates to: AKIITKDSPGVPRERGGSSFSLV*SAWARS Trigger: GGAGCGCGCCCACGCGCTCAAGACCAAGGAGAAGCT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAGCTTCTCCTTGGTCTaGAGCGCGTGGGCGCGCTCC | + |
Preference number: 5 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLSFSLV*SAWARS Trigger: GGAGCGCGCCCACGCGCTCAAGACCAAGGAGAAGCT...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGTGGTCGGCCTCCTCCTaGCTCATAGCCAGGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLWSASS*LIARAS Trigger: GCTGGCCCTGGCTATGAGCAAGGAGGAGGCCGACCA...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCATGCTGCTCCCAGAGGTaGGCAGGGCAGTGCGGAGTC | + |
Preference number: 5 (lower is better) Translates to: AKIITKDSPGVPRERGGSCCSQR*AGQCGV Trigger: GACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGCA...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTGGTCGGCCTCCTCCTaGCTCATAGCCAGGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRWSASS*LIARAS Trigger: GCTGGCCCTGGCTATGAGCAAGGAGGAGGCCGACCA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCGTTGCTGCTGGGCTTaGCAGGTGAGCCTCCCCAGG | + |
Preference number: 5 (lower is better) Translates to: TKDSPGVPRERGGSNTDLRCCWA*QVSLPR Trigger: CCTGGGGAGGCTCACCTGCAAAGCCCAGCAGCAACG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | AGTTGCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGTGCTGCTCCCAGAGGTaGGCAGGGCAGTGCGGAGTC | + |
Preference number: 5 (lower is better) Translates to: SCQNHHQGFTRGAKGTRRCCSQR*AGQCGV Trigger: GACTCCGCACTGCCCTGCCAACCTCTGGGAGCAGCA...CCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAAAGCTTCTCCTTGGTCTaGAGCGCGTGGGCGCGCTCC | + |
Preference number: 5 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKSFSLV*SAWARS Trigger: GGAGCGCGCCCACGCGCTCAAGACCAAGGAGAAGCT...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGTGTGCCAGCTTCTCCTaGGTCTTGAGCGCGTGGGCG | + |
Preference number: 5 (lower is better) Translates to: TKDSPGVPRERGGSNTDLCASFS*VLSAWA Trigger: CGCCCACGCGCTCAAGACCAAGGAGAAGCTGGCACA...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAATGGTCGGCCTCCTCCTaGCTCATAGCCAGGGCCAGC | + |
Preference number: 5 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKWSASS*LIARAS Trigger: GCTGGCCCTGGCTATGAGCAAGGAGGAGGCCGACCA...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCAAGAGATGACTCCTCCTaGCCCCCAGTCTCCCTCTTG | + |
Preference number: 5 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSRDDSS*PPVSLL Trigger: CAAGAGGGAGACTGGGGGCAAGGAGGAGTCATCTCT...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACGTTGCTGCTGGGCTTaGCAGGTGAGCCTCCCCAGG | + |
Preference number: 5 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKRCCWA*QVSLPR Trigger: CCTGGGGAGGCTCACCTGCAAAGCCCAGCAGCAACG...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | CAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAATGTGCCAGCTTCTCCTaGGTCTTGAGCGCGTGGGCG | + |
Preference number: 5 (lower is better) Translates to: QNHHQGFTRGAKGTRRLKCASFS*VLSAWA Trigger: CGCCCACGCGCTCAAGACCAAGGAGAAGCTGGCACA...TTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCCCCCAGTCTCCCTCTaGCTCTCCTCTATTGCCATC | + |
Preference number: 5 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLPPVSL*LSSIAI Trigger: GATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGGG...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCACCCCCAGTCTCCCTCTaGCTCTCCTCTATTGCCATC | + |
Preference number: 5 (lower is better) Translates to: AKIITKDSPGVPRERGGSPPVSL*LSSIAI Trigger: GATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGGG...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | TCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGAGAGATGACTCCTCCTaGCCCCCAGTCTCCCTCTTG | + |
Preference number: 5 (lower is better) Translates to: SSPRIHQGCQGNEEAQTLRDDSS*PPVSLL Trigger: CAAGAGGGAGACTGGGGGCAAGGAGGAGTCATCTCT...CAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | GCCAAAATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAATGGGTTGGAAGCCTaGGATCCTGGTGGTGTGGGG | + |
Preference number: 5 (lower is better) Translates to: AKIITKDSPGVPRERGGSNGLEA*DPGGVG Trigger: CCCCACACCACCAGGATCCAAGGCTTCCAACCCATT...TGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGATTTTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATGCTGGCTGGAAAGGATaGGTGACAGAGGGGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: ITKDSPGVPRERGGSNTDAGWKG*VTEGPV Trigger: CACAGGCCCCTCTGTCACCAATCCTTTCCAGCCAGC...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGCTGGCTGGAAAGGATaGGTGACAGAGGGGCCTGTG | + |
Preference number: 5 (lower is better) Translates to: IITKDSPGVPRERGGSNTAGWKG*VTEGPV Trigger: CACAGGCCCCTCTGTCACCAATCCTTTCCAGCCAGC...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTACTGCTGCAGTGCCGTaGCTGCTGGGCTTTGCAGGT | + |
Preference number: 5 (lower is better) Translates to: IITKDSPGVPRERGGSNTTAAVP*LLGFAG Trigger: ACCTGCAAAGCCCAGCAGCAACGGCACTGCAGCAGT...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | CACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGGGGGTTGTCACGCTCAGAGCCAGTCTaGATGAGGTACTCCATCAAC | + |
Preference number: 5 (lower is better) Translates to: HQGCQGNEEAQTLIWGLSRSEPV*MRYSIN Trigger: GTTGATGGAGTACCTCATCAAGACTGGCTCTGAGCG...TGACAACCCCCAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATAAAGCCACCAGCTGCTaGGCCTTCTCCCGCACATTC | + |
Preference number: 5 (lower is better) Translates to: ITKDSPGVPRERGGSNTDKATSC*AFSRTF Trigger: GAATGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTTT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGAAAGCCACCAGCTGCTaGGCCTTCTCCCGCACATTC | + |
Preference number: 5 (lower is better) Translates to: TKDSPGVPRERGGSNTDLKATSC*AFSRTF Trigger: GAATGTGCGGGAGAAGGCCAAGCAGCTGGTGGCTTT...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATCCCCCAGTCTCCCTCTaGCTCTCCTCTATTGCCATC | + |
Preference number: 5 (lower is better) Translates to: ITKDSPGVPRERGGSNTDPPVSL*LSSIAI Trigger: GATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGGG...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATAATGGGTTGGAAGCCTaGGATCCTGGTGGTGTGGGG | + |
Preference number: 5 (lower is better) Translates to: ITKDSPGVPRERGGSNTDNGLEA*DPGGVG Trigger: CCCCACACCACCAGGATCCAAGGCTTCCAACCCATT...ATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTGATTTGCGCTCAGAGCCAGTCTaGATGAGGTACTCCATCAAC | + |
Preference number: 5 (lower is better) Translates to: TKDSPGVPRERGGSNTDLRSEPV*MRYSIN Trigger: GTTGATGGAGTACCTCATCAAGACTGGCTCTGAGCG...CAAATCAGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS-3UTR CAA 90 bp | ATCATCACCAAGGATTCACCAGGGGTGCCAAGGGAACGAGGAGGCTCAAACACTCGCTCAGAGCCAGTCTaGATGAGGTACTCCATCAAC | + |
Preference number: 5 (lower is better) Translates to: IITKDSPGVPRERGGSNTRSEPV*MRYSIN Trigger: GTTGATGGAGTACCTCATCAAGACTGGCTCTGAGCG...AGTGTTTGAGCCTCCTCGTTCCCTTGGCACCCCTGGTGAATCCTTGGTGATGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CAA 90 bp | CCCACGGCTGCTGAGGAGGCCGTGGCAGTCTGTGCCAGCTTCTCCTaGGTCTTGAGCGCGTGGGCGCGCTCCTCCCGGAGCCGATCCTCA | + |
Preference number: 6 (lower is better) Translates to: PTAAEEAVAVCASFS*VLSAWARSSRSRSS Trigger: TGAGGATCGGCTCCGGGAGGAGCGCGCCCACGCGCTCAAGACCAAGGAGAAGCTGGCACAGACTGCCACGGCCTCCTCAGCAGCCGTGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 72 bp | TGCAACTCCTCCTCCCCGCTGCTCTGTGGCCATGCCTaGTCCGCCTCGGGAGGTGGTCCAGAGCCCACGGCT | + |
Preference number: 6 (lower is better) Translates to: CNSSSPLLCGHA*SASGGGPEPTA Trigger: AGCCGTGGGCTCTGGACCACCTCCCGAGGCGGAGCAGGCATGGCCACAGAGCAGCGGGGAGGAGGAGTTGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CAA 72 bp | GCTGAGGAGGCCGTGGCAGTCTGTGCCAGCTTCTCCTaGGTCTTGAGCGCGTGGGCGCGCTCCTCCCGGAGC | + |
Preference number: 6 (lower is better) Translates to: AEEAVAVCASFS*VLSAWARSSRS Trigger: GCTCCGGGAGGAGCGCGCCCACGCGCTCAAGACCAAGGAGAAGCTGGCACAGACTGCCACGGCCTCCTCAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CAA 90 bp | GGGCCTGTGGGCGGAGCTCCGCTTGGAAGGAATGGGTTGGAAGCCTaGGATCCTGGTGGTGTGGGGCCTGGTCGGCTCACCAGCGAGTCC | + |
Preference number: 6 (lower is better) Translates to: GPVGGAPLGRNGLEA*DPGGVGPGRLTSES Trigger: GGACTCGCTGGTGAGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 72 bp | TGCTCCTCTCGGCTCAAACTAAGGGCCAGCTGGAGCTaGACGTCATCCTCAGGGCCGCAGGACGGGGGCTGG | + |
Preference number: 6 (lower is better) Translates to: CSSRLKLRASWS*TSSSGPQDGGW Trigger: CCAGCCCCCGTCCTGCGGCCCTGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAGGAGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CAA 90 bp | GTGACAGAGGGGCCTGTGGGCGGAGCTCCGCTTGGAAGGAATGGGTaGGAAGCCTTGGATCCTGGTGGTGTGGGGCCTGGTCGGCTCACC | + |
Preference number: 6 (lower is better) Translates to: VTEGPVGGAPLGRNG*EALDPGGVGPGRLT Trigger: GGTGAGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCCCCTCTGTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 72 bp | GGCCTGTGGGCGGAGCTCCGCTTGGAAGGAATGGGTTaGAAGCCTTGGATCCTGGTGGTGTGGGGCCTGGTC | + |
Preference number: 6 (lower is better) Translates to: GLWAELRLEGMG*KPWILVVWGLV Trigger: GACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 72 bp | AGAGGGGCCTGTGGGCGGAGCTCCGCTTGGAAGGAATaGGTTGGAAGCCTTGGATCCTGGTGGTGTGGGGCC | + |
Preference number: 6 (lower is better) Translates to: RGACGRSSAWKE*VGSLGSWWCGA Trigger: GGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCCCCTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 72 bp | TGGGTTGGAAGCCTTGGATCCTGGTGGTGTGGGGCCTaGTCGGCTCACCAGCGAGTCCAGATCCACAAGGGC | + |
Preference number: 6 (lower is better) Translates to: WVGSLGSWWCGA*SAHQRVQIHKG Trigger: GCCCTTGTGGATCTGGACTCGCTGGTGAGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CCA 72 bp | GCGGAGCTCCGCTTGGAAGGAATGGGTTGGAAGCCTTaGATCCTGGTGGTGTGGGGCCTGGTCGGCTCACCA | + |
Preference number: 6 (lower is better) Translates to: AELRLEGMGWKP*ILVVWGLVGSP Trigger: TGGTGAGCCGACCAGGCCCCACACCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 72 bp | GAGACGGAGCTGGTTCAGGGTGAGCGTTGCAGGGGGTaGTGGCTGGAAAGGATTGGTGACAGAGGGGCCTGT | + |
Preference number: 6 (lower is better) Translates to: ETELVQGERCRG*WLERIGDRGAC Trigger: ACAGGCCCCTCTGTCACCAATCCTTTCCAGCCAGCACCCCCTGCAACGCTCACCCTGAACCAGCTCCGTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 72 bp | CATCAGGCTCTGTGTCAAAGCCCCCAACTGCTGCAGTaGCGTTGCTGCTGGGCTTTGCAGGTGAGCCTCCCC | + |
Preference number: 6 (lower is better) Translates to: HQALCQSPQLLQ*RCCWALQVSLP Trigger: GGGGAGGCTCACCTGCAAAGCCCAGCAGCAACGGCACTGCAGCAGTTGGGGGCTTTGACACAGAGCCTGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208634.2 |
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CDS CCA 72 bp | TTATCGTGCTCCTCTCGGCTCAAACTAAGGGCCAGCTaGAGCTGGACGTCATCCTCAGGGCCGCAGGACGGG | + |
Preference number: 6 (lower is better) Translates to: LSCSSRLKLRAS*SWTSSSGPQDG Trigger: CCCGTCCTGCGGCCCTGAGGATGACGTCCAGCTCCAGCTGGCCCTTAGTTTGAGCCGAGAGGAGCACGATAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 72 bp | ACTCATCAGGCTCTGTGTCAAAGCCCCCAACTGCAGTaGCGTTGCTGCTGGGCTTTGCAGGTGAGCCTCCCC | + |
Preference number: 6 (lower is better) Translates to: THQALCQSPQLQ*RCCWALQVSLP Trigger: GGGGAGGCTCACCTGCAAAGCCCAGCAGCAACGGCACTGCAGTTGGGGGCTTTGACACAGAGCCTGATGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 |
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CDS CCA 72 bp | ATTGGTGACAGAGGGGCCTGTGGGCGGAGCTCCGCTTaGAAGGAATGGGTTGGAAGCCTTGGATCCTGGTGG | + |
Preference number: 6 (lower is better) Translates to: IGDRGACGRSSA*KEWVGSLGSWW Trigger: CCACCAGGATCCAAGGCTTCCAACCCATTCCTTCCAAGCGGAGCTCCGCCCACAGGCCCCTCTGTCACCAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS GCA 72 bp | CACAGGACTGAGACGGAGCTGGTTCAGGGTGAGCGTTaGAGGGGGTGCTGGCTGGAAAGGATTGGTGACAGA | + |
Preference number: 6 (lower is better) Translates to: HRTETELVQGER*RGCWLERIGDR Trigger: TCTGTCACCAATCCTTTCCAGCCAGCACCCCCTGCAACGCTCACCCTGAACCAGCTCCGTCTCAGTCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS TCA 72 bp | AGAGGTTGGCAGGGCAGTGCGGAGTCGGTCGAAGTCTaGGAACTCATCAGGCTCTGTGTCAAAGCCCCCAAC | + |
Preference number: 6 (lower is better) Translates to: RGWQGSAESVEV*ELIRLCVKAPN Trigger: GTTGGGGGCTTTGACACAGAGCCTGATGAGTTCTCAGACTTCGACCGACTCCGCACTGCCCTGCCAACCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |
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CDS CAA 90 bp | GCAAGATCCATGAGAGATGACTCCTCCTTGCCCCCAGTCTCCCTCTaGCTCTCCTCTATTGCCATCTGCAGCCTCAGGTCATCCCCACGA | + |
Preference number: 6 (lower is better) Translates to: ARSMRDDSSLPPVSL*LSSIAICSLRSSPR Trigger: TCGTGGGGATGACCTGAGGCTGCAGATGGCAATAGAGGAGAGCAAGAGGGAGACTGGGGGCAAGGAGGAGTCATCTCTCATGGATCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045277.7 ENSMUST00000098845.10 ENSMUST00000208634.2 |