Pregenerated sensors for EPM2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055493Ensembl transcript IDs: ENSMUST00000069106.5
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTCCCTCCTTCTTTGTCTGCCTCCTCTGAGTGTCACCATGCTGACTaGGATTATACTCCCTTTCCTGAGCAGTACTTAACTTATGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: LPPSLSASSECHHAD*DYTPFPEQYLTYAV Trigger: CACAGCATAAGTTAAGTACTGCTCAGGAAAGGGAGTATAATCTCAGTCAGCATGGTGACACTCAGAGGAGGCAGACAAAGAAGGAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR TCA 90 bp | CACTGTGAGATTGGGCAAGCCAGCTATGCTCAACAATCCTCAACTGAAAACTGGGAGGGCATCTCCAGGTaGCACCAGCCACAGTCCCCT | + |
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Preference number: 2 (lower is better) Translates to: HCEIGQASYAQQSSTENWEGISR*HQPQSP Trigger: AGGGGACTGTGGCTGGTGTCACCTGGAGATGCCCTC...CCAGTTTTCAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR TCA 90 bp | AGACAGAGCTGCAGCCATGACAGTCTGCTAAAAACAAGTGGTACTGAAAGCAGCCAGTCCTCAGGAGGCTaGGCGGGGAGGATCACCATG | + |
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Preference number: 2 (lower is better) Translates to: RQSCSHDSLLKTSGTESSQSSGG*AGRITM Trigger: CATGGTGATCCTCCCCGCTCAGCCTCCTGAGGACTG...GCTGCTTTCAGTACCACTTGTTTTTAGCAGACTGTCATGGCTGCAGCTCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR TCA 90 bp | CCCTGTAAGCAAAGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATACACTGATTGCAAGTGTACTTTaGAGTTTTCTCATGTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: PCKQRPPAGGSSNYRHTLIASVL*SFLMWH Trigger: ATGCCACATGAGAAAACTTCAAAGTACACTTGCAAT...CAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCTTTGCTTACAGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCTGTAGGCTGCTCTGCCCAAAGCAAATGCCACCTCCCATGGGCATCATCGCAACTGGCACACAATaGCATTCAACTGAAGACAAA | + |
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Preference number: 2 (lower is better) Translates to: VSCRLLCPKQMPPPMGIIATGTQ*HSTEDK Trigger: TTTGTCTTCAGTTGAATGCCATTGTGTGCCAGTTGC...GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 90 bp | CTGAGCACATATTTGGGAGGAGCAGCAATTGTGTGTTATACTGAATaGAGTGCCAAGCCAGGATCAGCCCCTAGCTGTCCAAGAATCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSTYLGGAAIVCYTE*SAKPGSAPSCPRIW Trigger: CCAGATTCTTGGACAGCTAGGGGCTGATCCTGGCTTGGCACTCAATTCAGTATAACACACAATTGCTGCTCCTCCCAAATATGTGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR TCA 90 bp | GTTTCCTGTAGGCTGCTCTGCCCAAAGCAAATGCCACCTCCCATGGGCATCATCTTATACTCCCTTTCCTaGGCAGTACTTAACTTATGC | + |
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Preference number: 2 (lower is better) Translates to: VSCRLLCPKQMPPPMGIILYSLS*AVLNLC Trigger: GCATAAGTTAAGTACTGCTCAGGAAAGGGAGTATAA...GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR TCA 90 bp | GTGAGATTGGGCAAGCCAGCTATGCTCAACAATCCTCAACTGAAAACTGGTGTCAACTATGAAGCAGAATaGAGGAAATTACAGAACGCC | + |
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Preference number: 2 (lower is better) Translates to: VRLGKPAMLNNPQLKTGVNYEAE*RKLQNA Trigger: GGCGTTCTGTAATTTCCTTCATTCTGCTTCATAGTT...GACACCAGTTTTCAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 90 bp | TATACTCCCTTTCCTGAGCAGTACTTAACTTATGCTGTGGCCTTATaGTCTCTGCCCCTCCCAAATAATCTCTCTGCTATCTATTATCAC | + |
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Preference number: 2 (lower is better) Translates to: YTPFPEQYLTYAVAL*SLPLPNNLSAIYYH Trigger: GTGATAATAGATAGCAGAGAGATTATTTGGGAGGGGCAGAGACAATAAGGCCACAGCATAAGTTAAGTACTGCTCAGGAAAGGGAGTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 90 bp | ATCTTGCAGAGGGTGGAACACAGGTCTGTTTCTAGGTTTTATATCTaGGGAGGCAAAGTTTTGCTGATGTTTGTGCTTCTGATAGAATCT | + |
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Preference number: 2 (lower is better) Translates to: ILQRVEHRSVSRFYI*GGKVLLMFVLLIES Trigger: AGATTCTATCAGAAGCACAAACATCAGCAAAACTTTGCCTCCCAAGATATAAAACCTAGAAACAGACCTGTGTTCCACCCTCTGCAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 90 bp | TCAGATAAATTAGCCTTGAGAACATACACCAGAGCTTACAGTAGGTaGAACAAAACCCAACTGTTTTCCTACATCCTTTGGCAATGGATC | + |
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Preference number: 2 (lower is better) Translates to: SDKLALRTYTRAYSR*NKTQLFSYILWQWI Trigger: GATCCATTGCCAAAGGATGTAGGAAAACAGTTGGGTTTTGTTCAACCTACTGTAAGCTCTGGTGTATGTTCTCAAGGCTAATTTATCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR GCA 90 bp | ATCTTGGGAGGCAAAGTTTTGCTGATGTTTGTGCTTCTGATAGAATCTAATGGACACTCTCTTGTCTTCTaGATGCCAAAGTCACAAATC | + |
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Preference number: 2 (lower is better) Translates to: ILGGKVLLMFVLLIESNGHSLVF*MPKSQI Trigger: GATTTGTGACTTTGGCATGCAGAAGACAAGAGAGTG...TCCATTAGATTCTATCAGAAGCACAAACATCAGCAAAACTTTGCCTCCCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR TCA 72 bp | AAGCCCAACCAAGCCACAATAGAGGGCATCTCCAGGTaGCACCAGCCACAGTCCCCTTTGTCTCCAGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: KPNQATIEGISR*HQPQSPLSPGL Trigger: AAGACCTGGAGACAAAGGGGACTGTGGCTGGTGTCACCTGGAGATGCCCTCTATTGTGGCTTGGTTGGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTGTAGGCTGCTCTGCCCAAAGCAAATGCCACCTCCCATGGGCATCATCTTGGGAGGCAAAGTTTaGCTGATGTTTGTGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: VSCRLLCPKQMPPPMGIILGGKV*LMFVLL Trigger: CAGAAGCACAAACATCAGCAAAACTTTGCCTCCCAA...GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR GCA 72 bp | GCCGGTGGCAGCAGCAACTACAGGCATACACTGCATTaGAAGTGTACTTTGAAGTTTTCTCATGTGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: AGGSSNYRHTLH*KCTLKFSHVAC Trigger: GCATGCCACATGAGAAAACTTCAAAGTACACTTGCAATGCAGTGTATGCCTGTAGTTGCTGCTGCCACCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTGTAGGCTGCTCTGCCCAAAGCAAATGCCACCTCCCATGGGCATCATCCATTGCAAGTGTACTTaGAAGTTTTCTCATGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: VSCRLLCPKQMPPPMGIIHCKCT*KFSHVA Trigger: TGCCACATGAGAAAACTTCAAAGTACACTTGCAATG...GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTGTAGGCTGCTCTGCCCAAAGCAAATGCCACCTCCCATGGGCATCATCTCTAGGTTTTATATCTaGGGAGGCAAAGTTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VSCRLLCPKQMPPPMGIISRFYI*GGKVLL Trigger: CAGCAAAACTTTGCCTCCCAAGATATAAAACCTAGA...GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CCA 72 bp | CAAGTGGTACTGAAAGCAGCTCTGAGCCAAAGAAACTaGATTCCAAACTTCATCTCCTTCCTACCCACTGTG | + |
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Preference number: 3 (lower is better) Translates to: QVVLKAALSQRN*IPNFISFLPTV Trigger: CACAGTGGGTAGGAAGGAGATGAAGTTTGGAATCCAGTTTCTTTGGCTCAGAGCTGCTTTCAGTACCACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CCA 72 bp | GATGTCATCAGAGGTAGGGGAGCAACTGGCACACAATaGCATTCAACTGAAGACAAATATGCCCCTTCTATG | + |
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Preference number: 3 (lower is better) Translates to: DVIRGRGATGTQ*HSTEDKYAPSM Trigger: CATAGAAGGGGCATATTTGTCTTCAGTTGAATGCCATTGTGTGCCAGTTGCTCCCCTACCTCTGATGACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR TCA 72 bp | TCTTTGTCTGCCTCCTCTGAGTGTCACCATGCTGACTaGGATTATACTCCCTTTCCTGAGCAGTACTTAACT | + |
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Preference number: 3 (lower is better) Translates to: SLSASSECHHAD*DYTPFPEQYLT Trigger: AGTTAAGTACTGCTCAGGAAAGGGAGTATAATCTCAGTCAGCATGGTGACACTCAGAGGAGGCAGACAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR GCA 72 bp | TTAAATTACAAGAGAAATGTTTCCTGTAGGCTGCTCTaGCCAAAGCAAATGCCACCTCCCATGGGCATCATC | + |
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Preference number: 3 (lower is better) Translates to: LNYKRNVSCRLL*PKQMPPPMGII Trigger: GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAACATTTCTCTTGTAATTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR GCA 72 bp | CCTAGCTTTGTATCCATGACAACAGAAATGAACATGTaGTTTAAATTCTCTGGGCCTCAACTTCCCCATCTG | + |
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Preference number: 3 (lower is better) Translates to: PSFVSMTTEMNM*FKFSGPQLPHL Trigger: CAGATGGGGAAGTTGAGGCCCAGAGAATTTAAAGCACATGTTCATTTCTGTTGTCATGGATACAAAGCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CCA 72 bp | CATCACCTTGGTAGTTGGACATTATCTTGCAGAGGGTaGAACACAGGTCTGTTTCTAGGTTTTATATCTTGG | + |
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Preference number: 3 (lower is better) Translates to: HHLGSWTLSCRG*NTGLFLGFISW Trigger: CCAAGATATAAAACCTAGAAACAGACCTGTGTTCCACCCTCTGCAAGATAATGTCCAACTACCAAGGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR TCA 72 bp | GCAACTACAGGCATACACTGCATTGCAAGTGTACTTTaGAGTTTTCTCATGTGGCATGCAGTTTTCCTTTGT | + |
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Preference number: 3 (lower is better) Translates to: ATTGIHCIASVL*SFLMWHAVFLC Trigger: ACAAAGGAAAACTGCATGCCACATGAGAAAACTTCAAAGTACACTTGCAATGCAGTGTATGCCTGTAGTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR GCA 72 bp | GATAAGATCCACTTAACCACTCTCTTGTCTTCTGCATaGCAAAGTCACAAATCCATAACAACCTATGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: DKIHLTTLLSSA*QSHKSITTYAD Trigger: GTCTGCATAGGTTGTTATGGATTTGTGACTTTGGCATGCAGAAGACAAGAGAGTGGTTAAGTGGATCTTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR TCA 72 bp | ACTAGCTGTATTGCACAGGGGAGGCTAGACATCACTTaGTGCTGGTTTATAGACTTAACTTTCTTAAATTAC | + |
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Preference number: 3 (lower is better) Translates to: TSCIAQGRLDIT*CWFIDLTFLNY Trigger: GTAATTTAAGAAAGTTAAGTCTATAAACCAGCATCAAGTGATGTCTAGCCTCCCCTGTGCAATACAGCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR GCA 72 bp | ATTCTGTTCAGTAAAAAGCTGTTTGTGTTTCATGTATaGACATACAGTGTGTTGTGTATGTGTGTGTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: ILFSKKLFVFHV*TYSVLCMCVCL Trigger: GAGACACACACACATACACAACACACTGTATGTGCATACATGAAACACAAACAGCTTTTTACTGAACAGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR GCA 90 bp | CCCTGTAAGCAAAGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATACACTGCCTCCAGGCTCGCGCTaGAGGAACTTGTACCAGAAC | + |
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Preference number: 4 (lower is better) Translates to: PCKQRPPAGGSSNYRHTLPPGSR*RNLYQN Trigger: GTTCTGGTACAAGTTCCTGCAGCGCGAGCCTGGAGG...CAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCTTTGCTTACAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | AGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATACACTGCATTGCAAGTGTTGGTGTCTGGAGTCATaGGTTCAGGGTAGCGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RPPAGGSSNYRHTLHCKCWCLES*VQGSGC Trigger: GCAACCGCTACCCTGAACCCATGACTCCAGACACCA...ACACTTGCAATGCAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR TCA 90 bp | CCACAGTCCCCTTTGTCTCCAGGTCTTCCACTAACCACACCCCCAGGTTCCTTACAGCAACGGTCATGGTaGGGTCCATTTCCTTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PQSPLSPGLPLTTPPGSLQQRSW*GPFPSQ Trigger: CTGGGAAGGAAATGGACCTCACCATGACCGTTGCTG...TAAGGAACCTGGGGGTGTGGTTAGTGGAAGACCTGGAGACAAAGGGGACTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | AGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATACACTGCATTGCAAGTGTCTCAGTGCTCATGTCTaGAGTGGGCATCCAGATGTA | + |
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Preference number: 4 (lower is better) Translates to: RPPAGGSSNYRHTLHCKCLSAHV*SGHPDV Trigger: TACATCTGGATGCCCACTCCAGACATGAGCACTGAG...ACACTTGCAATGCAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | CCACAGTCCCCTTTGTCTCCAGGTCTTCCACTAACCACACCCCCAGGTTCCTTAACGCCAGCGTTGCAGTaGACATACACCGTGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PQSPLSPGLPLTTPPGSLTPALQ*TYTVCP Trigger: TGGACACACGGTGTATGTCCACTGCAACGCTGGCGT...TAAGGAACCTGGGGGTGTGGTTAGTGGAAGACCTGGAGACAAAGGGGACTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR GCA 90 bp | GCAGACCCTGTAAGCAAAGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATATGTCCTCATTATATGTaGAGCAACGGTCATGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: ADPVSKGPLPVAAATTGICPHYM*SNGHGE Trigger: CTCACCATGACCGTTGCTGCACATATAATGAGGACA...TATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCTTTGCTTACAGGGTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR TCA 90 bp | CCACAGTCCCCTTTGTCTCCAGGTCTTCCACTAACCACACCCCCAGGTTCCTTAAAGTCTTGTTGTGCTTaGGCCAAAGCGTCCTCGTCA | + |
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Preference number: 4 (lower is better) Translates to: PQSPLSPGLPLTTPPGSLKSCCA*AKASSS Trigger: TGACGAGGACGCTTTGGCTCAAGCACAACAAGACTT...TAAGGAACCTGGGGGTGTGGTTAGTGGAAGACCTGGAGACAAAGGGGACTGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | GCAGACCCTGTAAGCAAAGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATATTCTTGAATAGTGCATaGCTTGGTGGCCAGCAATAT | + |
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Preference number: 4 (lower is better) Translates to: ADPVSKGPLPVAAATTGIFLNSA*LGGQQY Trigger: ATATTGCTGGCCACCAAGCCATGCACTATTCAAGAA...TATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCTTTGCTTACAGGGTCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | AGACAGAGCTGCAGCCATGACAGTCTGCTAAAAACAAGTGGTACTGAAAGCAGCGAGACACACAGCCTGTaGCAGCATCTGCACTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RQSCSHDSLLKTSGTESSETHSL*QHLHSA Trigger: GGCCGAGTGCAGATGCTGCCACAGGCTGTGTGTCTC...GCTGCTTTCAGTACCACTTGTTTTTAGCAGACTGTCATGGCTGCAGCTCTGTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR TCA 90 bp | GTTTCCTGTAGGCTGCTCTGCCCAAAGCAAATGCCACCTCCCATGGGCATCATCCTGAAGAATTCTGGATaGTATCCCATTCAGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: VSCRLLCPKQMPPPMGIILKNSG*YPIQSG Trigger: TCCAGACTGAATGGGATATCATCCAGAATTCTTCAG...GATGATGCCCATGGGAGGTGGCATTTGCTTTGGGCAGAGCAGCCTACAGGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR GCA 90 bp | ATGAAGCAGAATGAAGGAAATTACAGAACGCCATTGTTCTATGACCATGCGCAGCCATTTCCTTCCCAGTaGAGCTCGCCTCCAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: MKQNEGNYRTPLFYDHAQPFPSQ*SSPPGS Trigger: CGAGCCTGGAGGCGAGCTGCACTGGGAAGGAAATGG...CTGCGCATGGTCATAGAACAATGGCGTTCTGTAATTTCCTTCATTCTGCTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | CCACAGTCCCCTTTGTCTCCAGGTCTTCCACTAACCACACCCCCAGGTTCCTTAAATCCAGTGTCCTACTaGGAGACAATAAACACCATC | + |
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Preference number: 4 (lower is better) Translates to: PQSPLSPGLPLTTPPGSLNPVSY*ETINTI Trigger: GATGGTGTTTATTGTCTCCCAGTAGGACACTGGATT...TAAGGAACCTGGGGGTGTGGTTAGTGGAAGACCTGGAGACAAAGGGGACTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | GTGAGATTGGGCAAGCCAGCTATGCTCAACAATCCTCAACTGAAAACTGGTGTCCATTGGTGTGCCCAGTaGCCTCAATCCAGTGTCCTA | + |
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Preference number: 4 (lower is better) Translates to: VRLGKPAMLNNPQLKTGVHWCAQ*PQSSVL Trigger: TAGGACACTGGATTGAGGCCACTGGGCACACCAATG...GACACCAGTTTTCAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR GCA 90 bp | AGACAGAGCTGCAGCCATGACAGTCTGCTAAAAACAAGTGGTACTGAAAGCAGCGTTCAGGGTAGCGGTTaGAGCCTGAAGAATTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: RQSCSHDSLLKTSGTESSVQGSG*SLKNSG Trigger: TCCAGAATTCTTCAGGCTGCAACCGCTACCCTGAAC...GCTGCTTTCAGTACCACTTGTTTTTAGCAGACTGTCATGGCTGCAGCTCTGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | GAAGTTTTCTCATGTGGCATGCAGTTTTCCTTTGTAAAGCATTTCAAACACAAGCGCACACTGCAGCTGTaGAGCGACCCACGCCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: EVFSCGMQFSFVKHFKHKRTLQL*SDPRQR Trigger: ACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCG...CTTGTGTTTGAAATGCTTTACAAAGGAAAACTGCATGCCACATGAGAAAACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | TGCCGGTGGCAGCAGCAACTACAGGCATACACTGCATaGCAAGTGTACTTTGAAGTTTTCTCATGTGGCATG | + |
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Preference number: 4 (lower is better) Translates to: CRWQQQLQAYTA*QVYFEVFSCGM Trigger: CATGCCACATGAGAAAACTTCAAAGTACACTTGCAATGCAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | CACTGTGAGATTGGGCAAGCCAGCTATGCTCAACAATCCTCAACTGAAAACTGGCTTCATCATGGTGTCTaGAGTCATGGGTTCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: HCEIGQASYAQQSSTENWLHHGV*SHGFRV Trigger: TACCCTGAACCCATGACTCCAGACACCATGATGAAG...CCAGTTTTCAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCACAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | GGAAATTACAGAACGCCATTGTTCTATGACCATGCGCAGGAGCTCTTTCTGAGTTGCTCATGTCTGGAGTaGGCATCCAGATGTAGGACA | + |
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Preference number: 4 (lower is better) Translates to: GNYRTPLFYDHAQELFLSCSCLE*ASRCRT Trigger: TGTCCTACATCTGGATGCCCACTCCAGACATGAGCA...ACTCAGAAAGAGCTCCTGCGCATGGTCATAGAACAATGGCGTTCTGTAATTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | ATTCCAAACTTCATCTCCTTCCTACCCACTGTGAGATaGGGCAAGCCAGCTATGCTCAACAATCCTCAACTG | + |
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Preference number: 4 (lower is better) Translates to: IPNFISFLPTVR*GKPAMLNNPQL Trigger: CAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCACAGTGGGTAGGAAGGAGATGAAGTTTGGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR GCA 90 bp | AAGAAACTGGATTCCAAACTTCATCTCCTTCCTACCCACTGTGAGATTGGGCAATTCATTTCATTGGTGTaGCCAGTGGCCTCAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: KKLDSKLHLLPTHCEIGQFISLV*PVASIQ Trigger: CTGGATTGAGGCCACTGGGCACACCAATGAAATGAA...TTGCCCAATCTCACAGTGGGTAGGAAGGAGATGAAGTTTGGAATCCAGTTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR GCA 90 bp | AGACAGAGCTGCAGCCATGACAGTCTGCTAAAAACAAGTGGTACTGAAAGCAGCGTAACTCCCAGTTCATaGTTCAGTTTGATGGTCACA | + |
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Preference number: 4 (lower is better) Translates to: RQSCSHDSLLKTSGTESSVTPSS*FSLMVT Trigger: TGTGACCATCAAACTGAAGCATGAACTGGGAGTTAC...GCTGCTTTCAGTACCACTTGTTTTTAGCAGACTGTCATGGCTGCAGCTCTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | CATAGTTATCCCTTCCACCAGCAAATGTCTATAATTCTGTTCAGTAAAAAGCTGGTCACATGTTCCAGTTaGCGAGGGCAGCTACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSYPFHQQMSIILFSKKLVTCSS*RGQLPS Trigger: GCTGGGTAGCTGCCCTCGCCAACTGGAACATGTGAC...CAGCTTTTTACTGAACAGAATTATAGACATTTGCTGGTGGAAGGGATAACTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | AGACAAATATGCCCCTTCTATGCCCTTAACATCACCTaGGTAGTTGGACATTATCTTGCAGAGGGTGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RQICPFYALNIT*VVGHYLAEGGT Trigger: TGTTCCACCCTCTGCAAGATAATGTCCAACTACCAAGGTGATGTTAAGGGCATAGAAGGGGCATATTTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | TTTCCTGAGCAGTACTTAACTTATGCTGTGGCCTTATaGTCTCTGCCCCTCCCAAATAATCTCTCTGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: FPEQYLTYAVAL*SLPLPNNLSAI Trigger: GATAGCAGAGAGATTATTTGGGAGGGGCAGAGACAATAAGGCCACAGCATAAGTTAAGTACTGCTCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | ACTATGAAGCAGAATGAAGGAAATTACAGAACGCCATaGTTCTATGACCATGCGCAGGAGCTCTTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TMKQNEGNYRTP*FYDHAQELFLS Trigger: ACTCAGAAAGAGCTCCTGCGCATGGTCATAGAACAATGGCGTTCTGTAATTTCCTTCATTCTGCTTCATAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | CTTCCTCTCTTGAACTGTGGCTCAGATAAATTAGCCTaGAGAACATACACCAGAGCTTACAGTAGGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLNCGSDKLA*RTYTRAYSRLN Trigger: GTTCAACCTACTGTAAGCTCTGGTGTATGTTCTCAAGGCTAATTTATCTGAGCCACAGTTCAAGAGAGGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | AGGGTGGAACACAGGTCTGTTTCTAGGTTTTATATCTaGGGAGGCAAAGTTTTGCTGATGTTTGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVEHRSVSRFYI*GGKVLLMFVLL Trigger: CAGAAGCACAAACATCAGCAAAACTTTGCCTCCCAAGATATAAAACCTAGAAACAGACCTGTGTTCCACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | AGCAACTACAGGCATACACTGCATTGCAAGTGTACTTaGAAGTTTTCTCATGTGGCATGCAGTTTTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNYRHTLHCKCT*KFSHVACSFPL Trigger: CAAAGGAAAACTGCATGCCACATGAGAAAACTTCAAAGTACACTTGCAATGCAGTGTATGCCTGTAGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | TTAGCCTTGAGAACATACACCAGAGCTTACAGTAGGTaGAACAAAACCCAACTGTTTTCCTACATCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LALRTYTRAYSR*NKTQLFSYILW Trigger: CCAAAGGATGTAGGAAAACAGTTGGGTTTTGTTCAACCTACTGTAAGCTCTGGTGTATGTTCTCAAGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | CATAGTTATCCCTTCCACCAGCAAATGTCTATAATTCTGTTCAGTAAAAAGCTGTGTGCTTCATTTCATTaGTGTGCCCAGTGGCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HSYPFHQQMSIILFSKKLCASFH*CAQWPQ Trigger: TTGAGGCCACTGGGCACACCAATGAAATGAAGCACA...CAGCTTTTTACTGAACAGAATTATAGACATTTGCTGGTGGAAGGGATAACTATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR TCA 90 bp | ATCTTGGGAGGCAAAGTTTTGCTGATGTTTGTGCTTCTGATAGAATCTAATGGAGTTCATGCTTCAGTTTaGTGGTCACATGTTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILGGKVLLMFVLLIESNGVHASV*WSHVPV Trigger: AACTGGAACATGTGACCATCAAACTGAAGCATGAAC...TCCATTAGATTCTATCAGAAGCACAAACATCAGCAAAACTTTGCCTCCCAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
||
| CDS-3UTR TCA 90 bp | GAAGTTTTCTCATGTGGCATGCAGTTTTCCTTTGTAAAGCATTTCAAACACAAGACCTTCCCGAACTTCTaGGAAAAGTCTTGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EVFSCGMQFSFVKHFKHKTFPNF*EKSCCA Trigger: AGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGT...CTTGTGTTTGAAATGCTTTACAAAGGAAAACTGCATGCCACATGAGAAAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | GATGTACATAGTTATCCCTTCCACCAGCAAATGTCTATAATTCTGTTCAGTAAACAGCCTGAAGAATTCTaGATGATATCCCATTCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYPFHQQMSIILFSKQPEEF*MISHSV Trigger: GACTGAATGGGATATCATCCAGAATTCTTCAGGCTG...TTTACTGAACAGAATTATAGACATTTGCTGGTGGAAGGGATAACTATGTACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CCA 90 bp | GATGTACATAGTTATCCCTTCCACCAGCAAATGTCTATAATTCTGTTCAGTAAATATACAGCTTCATCATaGTGTCTGGAGTCATGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYPFHQQMSIILFSKYTASS*CLESWV Trigger: AACCCATGACTCCAGACACCATGATGAAGCTGTATA...TTTACTGAACAGAATTATAGACATTTGCTGGTGGAAGGGATAACTATGTACATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
||
| CDS-3UTR CCA 90 bp | CATAGTTATCCCTTCCACCAGCAAATGTCTATAATTCTGTTCAGTAAAAAGCTGATATCCCATTCAGTCTaGAAATTCATGACAGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HSYPFHQQMSIILFSKKLISHSV*KFMTAV Trigger: TACAGCTGTCATGAATTTCCAGACTGAATGGGATAT...CAGCTTTTTACTGAACAGAATTATAGACATTTGCTGGTGGAAGGGATAACTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| 3UTR CAA 72 bp | TCTGTTTCTAGGTTTTATATCTTGGGAGGCAAAGTTTaGCTGATGTTTGTGCTTCTGATAGAATCTAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: SVSRFYILGGKV*LMFVLLIESNG Trigger: TCCATTAGATTCTATCAGAAGCACAAACATCAGCAAAACTTTGCCTCCCAAGATATAAAACCTAGAAACAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | TCCCAGCGCCCTAACTCGGGCCGCGAGCCGGCGAGCAGCAGCTCCTaGCGAGCGCCGGCCACCGCGGGCGGCACCACCACGCCGAAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SQRPNSGREPASSSS*RAPATAGGTTTPKR Trigger: CCGCTTCGGCGTGGTGGTGCCGCCCGCGGTGGCCGGCGCTCGGCAGGAGCTGCTGCTCGCCGGCTCGCGGCCCGAGTTAGGGCGCTGGGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | TCGTACGCCTCCAGCTCCACCTCGGCGAGCCACAGGCCGGGCTCCTaGAGCGCCAGCGCAGCGGCGCCCGCCGCGGTACCCGCGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SYASSSTSASHRPGS*SASAAAPAAVPAGL Trigger: CAGGCCCGCGGGTACCGCGGCGGGCGCCGCTGCGCTGGCGCTGCAGGAGCCCGGCCTGTGGCTCGCCGAGGTGGAGCTGGAGGCGTACGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | GGAGCCAGCCGCACACTGCAGCTGTGGAGCGACCCACGCCAGCGTTaGAGTGGACATACACCGTGTGTCCATTCTCCAGAAGCGCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GASRTLQLWSDPRQR*SGHTPCVHSPEARA Trigger: TGCACGCGCTTCTGGAGAATGGACACACGGTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTGGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 90 bp | CAGCCGCACACTGCAGCTGTGGAGCGACCCACGCCAGCGTTGCAGTaGACATACACCGTGTGTCCATTCTCCAGAAGCGCGTGCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPHTAAVERPTPALQ*TYTVCPFSRSACRR Trigger: TCTCCTGCACGCGCTTCTGGAGAATGGACACACGGTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 90 bp | CGTGTGTCCATTCTCCAGAAGCGCGTGCAGGAGACACACAGCCTGTaGCAGCATCTGCACTCGGCCCTCAGTGCTCATGTCTGGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSILQKRVQETHSL*QHLHSALSAHVWSG Trigger: CCCACTCCAGACATGAGCACTGAGGGCCGAGTGCAGATGCTGCCACAGGCTGTGTGTCTCCTGCACGCGCTTCTGGAGAATGGACACACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | TTCTCCAGAAGCGCGTGCAGGAGACACACAGCCTGTGGCAGCATCTaGACTCGGCCCTCAGTGCTCATGTCTGGAGTGGGCATCCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FSRSACRRHTACGSI*TRPSVLMSGVGIQM Trigger: CATCTGGATGCCCACTCCAGACATGAGCACTGAGGGCCGAGTGCAGATGCTGCCACAGGCTGTGTGTCTCCTGCACGCGCTTCTGGAGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | GCGTTGCAGTGGACATACACCGTGTGTCCATTCTCCAGAAGCGCGTaGAGGAGACACACAGCCTGTGGCAGCATCTGCACTCGGCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALQWTYTVCPFSRSA*RRHTACGSICTRPS Trigger: TGAGGGCCGAGTGCAGATGCTGCCACAGGCTGTGTGTCTCCTGCACGCGCTTCTGGAGAATGGACACACGGTGTATGTCCACTGCAACGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | CTTGCGCAGATTCCAGCCAATCACATAGTGGAGCCAGCCGCACACTaGAGCTGTGGAGCGACCCACGCCAGCGTTGCAGTGGACATACAC | + |
|
Preference number: 5 (lower is better) Translates to: LAQIPANHIVEPAAH*SCGATHASVAVDIH Trigger: GTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTGGCTCCACTATGTGATTGGCTGGAATCTGCGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 90 bp | GATTCCAGCCAATCACATAGTGGAGCCAGCCGCACACTGCAGCTGTaGAGCGACCCACGCCAGCGTTGCAGTGGACATACACCGTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: DSSQSHSGASRTLQL*SDPRQRCSGHTPCV Trigger: GACACACGGTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTGGCTCCACTATGTGATTGGCTGGAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS TCA 90 bp | CCATCCACCAAGTTGTCCTCATTATATGTGCAGCAACGGTCATGGTaGGGTCCATTTCCTTCCCAGTGCAGCTCGCCTCCAGGCTCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PSTKLSSLYVQQRSW*GPFPSQCSSPPGSR Trigger: GCGCGAGCCTGGAGGCGAGCTGCACTGGGAAGGAAATGGACCTCACCATGACCGTTGCTGCACATATAATGAGGACAACTTGGTGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | CCCTGTAAGCAAAGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATACACTGACACCATCCACCAAGTaGTCCTCATTATATGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: PCKQRPPAGGSSNYRHTLTPSTK*SSLYVQ Trigger: CTGCACATATAATGAGGACAACTTGGTGGATGGTGT...CAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCTTTGCTTACAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | GTGAGATTGGGCAAGCCAGCTATGCTCAACAATCCTCAACTGAAAACTGGTGTCGGTCACATGTTCCAGTaGGCGAGGGCAGCTACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VRLGKPAMLNNPQLKTGVGHMFQ*ARAATQ Trigger: CTGGGTAGCTGCCCTCGCCAACTGGAACATGTGACC...GACACCAGTTTTCAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 90 bp | GCATCCAGATGTAGGACAAGCCTTCTTCCTTATACAGCTTCATCATaGTGTCTGGAGTCATGGGTTCAGGGTAGCGGTTGCAGCCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ASRCRTSLLPYTASS*CLESWVQGSGCSLK Trigger: CTTCAGGCTGCAACCGCTACCCTGAACCCATGACTCCAGACACCATGATGAAGCTGTATAAGGAAGAAGGCTTGTCCTACATCTGGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | CACTGTGAGATTGGGCAAGCCAGCTATGCTCAACAATCCTCAACTGAAAACTGGTCGCGCTGCAGGAACTaGTACCAGAACGTGTCAACG | + |
|
Preference number: 5 (lower is better) Translates to: HCEIGQASYAQQSSTENWSRCRN*YQNVST Trigger: CGTTGACACGTTCTGGTACAAGTTCCTGCAGCGCGA...CCAGTTTTCAGTTGAGGATTGTTGAGCATAGCTGGCTTGCCCAATCTCACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | AGGCCCCCTGCCGGTGGCAGCAGCAACTACAGGCATACACTGCATTGCAAGTGTTATTTGGTAGAATTCTaGAATAGTGCATGGCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RPPAGGSSNYRHTLHCKCYLVEF*NSAWLG Trigger: ACCAAGCCATGCACTATTCAAGAATTCTACCAAATA...ACACTTGCAATGCAGTGTATGCCTGTAGTTGCTGCTGCCACCGGCAGGGGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | CTGGGAGACAATAAACACCATCCACCAAGTTGTCCTCATTATATGTaGAGCAACGGTCATGGTGAGGTCCATTTCCTTCCCAGTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LGDNKHHPPSCPHYM*SNGHGEVHFLPSAA Trigger: AGCTGCACTGGGAAGGAAATGGACCTCACCATGACCGTTGCTGCACATATAATGAGGACAACTTGGTGGATGGTGTTTATTGTCTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | TATGGAAGAGTGAACCTTCCCGAACTTCTGAGAAAAGTCTTGTTGTaGTTGAGCCAAAGCGTCCTCGTCAATGTAGACCGCAGGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YGRVNLPELLRKVLL*LSQSVLVNVDRRPL Trigger: AAGAGGCCTGCGGTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCACTCTTCCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | GGAAATTACAGAACGCCATTGTTCTATGACCATGCGCAGGAGCTCTTTCTGAGTGTGTGCTTCATTTCATaGGTGTGCCCAGTGGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GNYRTPLFYDHAQELFLSVCFIS*VCPVAS Trigger: TGAGGCCACTGGGCACACCAATGAAATGAAGCACAC...ACTCAGAAAGAGCTCCTGCGCATGGTCATAGAACAATGGCGTTCTGTAATTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 90 bp | TCCCATTCAGTCTGGAAATTCATGACAGCTGTAACTCCCAGTTCATaGTTCAGTTTGATGGTCACATGTTCCAGTTGGCGAGGGCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: SHSVWKFMTAVTPSS*FSLMVTCSSWRGQL Trigger: TAGCTGCCCTCGCCAACTGGAACATGTGACCATCAAACTGAAGCATGAACTGGGAGTTACAGCTGTCATGAATTTCCAGACTGAATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 90 bp | CTTCATTTCATTGGTGTGCCCAGTGGCCTCAATCCAGTGTCCTACTaGGAGACAATAAACACCATCCACCAAGTTGTCCTCATTATATGT | + |
|
Preference number: 5 (lower is better) Translates to: LHFIGVPSGLNPVSY*ETINTIHQVVLIIC Trigger: ACATATAATGAGGACAACTTGGTGGATGGTGTTTATTGTCTCCCAGTAGGACACTGGATTGAGGCCACTGGGCACACCAATGAAATGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | AAGAAACTGGATTCCAAACTTCATCTCCTTCCTACCCACTGTGAGATTGGGCAAAGTTCATGCTTCAGTTaGATGGTCACATGTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: KKLDSKLHLLPTHCEIGQSSCFS*MVTCSS Trigger: ACTGGAACATGTGACCATCAAACTGAAGCATGAACT...TTGCCCAATCTCACAGTGGGTAGGAAGGAGATGAAGTTTGGAATCCAGTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | GATACACTGGACAACGCACTCACTGAGGGAGTCATTTTAAAATGTTCTTCAATAATGAAGTACTGCACCTaGCGCAGATTCCAGCCAATC | + |
|
Preference number: 5 (lower is better) Translates to: DTLDNALTEGVILKCSSIMKYCT*RRFQPI Trigger: GATTGGCTGGAATCTGCGCAAGGTGCAGTACTTCAT...TATTGAAGAACATTTTAAAATGACTCCCTCAGTGAGTGCGTTGTCCAGTGTATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | GAAGTTTTCTCATGTGGCATGCAGTTTTCCTTTGTAAAGCATTTCAAACACAAGCTTCTGAGAAAAGTCTaGTTGTGCTTGAGCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: EVFSCGMQFSFVKHFKHKLLRKV*LCLSQS Trigger: GCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAG...CTTGTGTTTGAAATGCTTTACAAAGGAAAACTGCATGCCACATGAGAAAACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS-3UTR CAA 90 bp | GATACACTGGACAACGCACTCACTGAGGGAGTCATTTTAAAATGTTCTTCAATATACCCAGCCAGATATTaGGTAGAATTCTTGAATAGT | + |
|
Preference number: 5 (lower is better) Translates to: DTLDNALTEGVILKCSSIYPARY*VEFLNS Trigger: ACTATTCAAGAATTCTACCAAATATCTGGCTGGGTA...TATTGAAGAACATTTTAAAATGACTCCCTCAGTGAGTGCGTTGTCCAGTGTATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 72 bp | TCCAGCTCCACCTCGGCGAGCCACAGGCCGGGCTCCTaGAGCGCCAGCGCAGCGGCGCCCGCCGCGGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSTSASHRPGS*SASAAAPAAVP Trigger: GGGTACCGCGGCGGGCGCCGCTGCGCTGGCGCTGCAGGAGCCCGGCCTGTGGCTCGCCGAGGTGGAGCTGGA 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 90 bp | TTTCCTTCCCAGTGCAGCTCGCCTCCAGGCTCGCGCTGCAGGAACTaGTACCAGAACGTGTCAACGCGGCCCGGCTCCGCCCCGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FPSQCSSPPGSRCRN*YQNVSTRPGSAPPA Trigger: GGCCGGCGGGGCGGAGCCGGGCCGCGTTGACACGTTCTGGTACAAGTTCCTGCAGCGCGAGCCTGGAGGCGAGCTGCACTGGGAAGGAAA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 72 bp | CAGTGCAGCTCGCCTCCAGGCTCGCGCTGCAGGAACTaGTACCAGAACGTGTCAACGCGGCCCGGCTCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: QCSSPPGSRCRN*YQNVSTRPGSA Trigger: GGCGGAGCCGGGCCGCGTTGACACGTTCTGGTACAAGTTCCTGCAGCGCGAGCCTGGAGGCGAGCTGCACTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 90 bp | TGGAGCCAGCCGCACACTGCAGCTGTGGAGCGACCCACGCCAGCGTaGCAGTGGACATACACCGTGTGTCCATTCTCCAGAAGCGCGTGC | + |
|
Preference number: 6 (lower is better) Translates to: WSQPHTAAVERPTPA*QWTYTVCPFSRSAC Trigger: GCACGCGCTTCTGGAGAATGGACACACGGTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTGGCTCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 72 bp | TTTCCTTCCCAGTGCAGCTCGCCTCCAGGCTCGCGCTaGAGGAACTTGTACCAGAACGTGTCAACGCGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: FPSQCSSPPGSR*RNLYQNVSTRP Trigger: GGGCCGCGTTGACACGTTCTGGTACAAGTTCCTGCAGCGCGAGCCTGGAGGCGAGCTGCACTGGGAAGGAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 72 bp | ATTCCAGCCAATCACATAGTGGAGCCAGCCGCACACTaGAGCTGTGGAGCGACCCACGCCAGCGTTGCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: IPANHIVEPAAH*SCGATHASVAV Trigger: CACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTGGCTCCACTATGTGATTGGCTGGAAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
||
| CDS CAA 72 bp | CCGCACACTGCAGCTGTGGAGCGACCCACGCCAGCGTaGCAGTGGACATACACCGTGTGTCCATTCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PHTAAVERPTPA*QWTYTVCPFSR Trigger: TCTGGAGAATGGACACACGGTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 72 bp | CGCACACTGCAGCTGTGGAGCGACCCACGCCAGCGTTaGAGTGGACATACACCGTGTGTCCATTCTCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RTLQLWSDPRQR*SGHTPCVHSPE Trigger: TTCTGGAGAATGGACACACGGTGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 72 bp | ATTCTCCAGAAGCGCGTGCAGGAGACACACAGCCTGTaGCAGCATCTGCACTCGGCCCTCAGTGCTCATGTC | + |
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Preference number: 6 (lower is better) Translates to: ILQKRVQETHSL*QHLHSALSAHV Trigger: GACATGAGCACTGAGGGCCGAGTGCAGATGCTGCCACAGGCTGTGTGTCTCCTGCACGCGCTTCTGGAGAAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 72 bp | CAATCACATAGTGGAGCCAGCCGCACACTGCAGCTGTaGAGCGACCCACGCCAGCGTTGCAGTGGACATACA | + |
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Preference number: 6 (lower is better) Translates to: QSHSGASRTLQL*SDPRQRCSGHT Trigger: TGTATGTCCACTGCAACGCTGGCGTGGGTCGCTCCACAGCTGCAGTGTGCGGCTGGCTCCACTATGTGATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 72 bp | TGGACATACACCGTGTGTCCATTCTCCAGAAGCGCGTaGAGGAGACACACAGCCTGTGGCAGCATCTGCACT | + |
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Preference number: 6 (lower is better) Translates to: WTYTVCPFSRSA*RRHTACGSICT Trigger: AGTGCAGATGCTGCCACAGGCTGTGTGTCTCCTGCACGCGCTTCTGGAGAATGGACACACGGTGTATGTCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 90 bp | GGAAGAGTGAACCTTCCCGAACTTCTGAGAAAAGTCTTGTTGTGCTaGAGCCAAAGCGTCCTCGTCAATGTAGACCGCAGGCCTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRVNLPELLRKVLLC*SQSVLVNVDRRPLG Trigger: GCCAAGAGGCCTGCGGTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCACTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 90 bp | GTCTGGAAATTCATGACAGCTGTAACTCCCAGTTCATGCTTCAGTTaGATGGTCACATGTTCCAGTTGGCGAGGGCAGCTACCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: VWKFMTAVTPSSCFS*MVTCSSWRGQLPSQ Trigger: CTGGCTGGGTAGCTGCCCTCGCCAACTGGAACATGTGACCATCAAACTGAAGCATGAACTGGGAGTTACAGCTGTCATGAATTTCCAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS TCA 72 bp | AAGTTGTCCTCATTATATGTGCAGCAACGGTCATGGTaGGGTCCATTTCCTTCCCAGTGCAGCTCGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: KLSSLYVQQRSW*GPFPSQCSSPP Trigger: TGGAGGCGAGCTGCACTGGGAAGGAAATGGACCTCACCATGACCGTTGCTGCACATATAATGAGGACAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 72 bp | ATTGGTGTGCCCAGTGGCCTCAATCCAGTGTCCTACTaGGAGACAATAAACACCATCCACCAAGTTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: IGVPSGLNPVSY*ETINTIHQVVL Trigger: GAGGACAACTTGGTGGATGGTGTTTATTGTCTCCCAGTAGGACACTGGATTGAGGCCACTGGGCACACCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 72 bp | GTTCCAGTTGGCGAGGGCAGCTACCCAGCCAGATATTaGGTAGAATTCTTGAATAGTGCATGGCTTGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: VPVGEGSYPARY*VEFLNSAWLGG Trigger: GCCACCAAGCCATGCACTATTCAAGAATTCTACCAAATATCTGGCTGGGTAGCTGCCCTCGCCAACTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 90 bp | GCATATGGAAGAGTGAACCTTCCCGAACTTCTGAGAAAAGTCTTGTaGTGCTTGAGCCAAAGCGTCCTCGTCAATGTAGACCGCAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: AYGRVNLPELLRKVL*CLSQSVLVNVDRRP Trigger: AGGCCTGCGGTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCACTCTTCCATATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 90 bp | AGCGCATATGGAAGAGTGAACCTTCCCGAACTTCTGAGAAAAGTCTaGTTGTGCTTGAGCCAAAGCGTCCTCGTCAATGTAGACCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: SAYGRVNLPELLRKV*LCLSQSVLVNVDRR Trigger: CCTGCGGTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCACTCTTCCATATGCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS GCA 72 bp | GTGAACCTTCCCGAACTTCTGAGAAAAGTCTTGTTGTaGTTGAGCCAAAGCGTCCTCGTCAATGTAGACCGC | + |
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Preference number: 6 (lower is better) Translates to: VNLPELLRKVLL*LSQSVLVNVDR Trigger: GCGGTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 72 bp | AACCTTCCCGAACTTCTGAGAAAAGTCTTGTTGTGCTaGAGCCAAAGCGTCCTCGTCAATGTAGACCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: NLPELLRKVLLC*SQSVLVNVDRR Trigger: CCTGCGGTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 72 bp | CTTCCTTATACAGCTTCATCATGGTGTCTGGAGTCATaGGTTCAGGGTAGCGGTTGCAGCCTGAAGAATTCT | + |
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Preference number: 6 (lower is better) Translates to: LPYTASSWCLES*VQGSGCSLKNS Trigger: AGAATTCTTCAGGCTGCAACCGCTACCCTGAACCCATGACTCCAGACACCATGATGAAGCTGTATAAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 72 bp | TTCATGACAGCTGTAACTCCCAGTTCATGCTTCAGTTaGATGGTCACATGTTCCAGTTGGCGAGGGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: FMTAVTPSSCFS*MVTCSSWRGQL Trigger: TAGCTGCCCTCGCCAACTGGAACATGTGACCATCAAACTGAAGCATGAACTGGGAGTTACAGCTGTCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 72 bp | AGAGTGAACCTTCCCGAACTTCTGAGAAAAGTCTTGTaGTGCTTGAGCCAAAGCGTCCTCGTCAATGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: RVNLPELLRKVL*CLSQSVLVNVD Trigger: GTCTACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CAA 72 bp | GGAAGAGTGAACCTTCCCGAACTTCTGAGAAAAGTCTaGTTGTGCTTGAGCCAAAGCGTCCTCGTCAATGTA | + |
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Preference number: 6 (lower is better) Translates to: GRVNLPELLRKV*LCLSQSVLVNV Trigger: TACATTGACGAGGACGCTTTGGCTCAAGCACAACAAGACTTTTCTCAGAAGTTCGGGAAGGTTCACTCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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| CDS CCA 72 bp | CAGCCTGAAGAATTCTGGATGATATCCCATTCAGTCTaGAAATTCATGACAGCTGTAACTCCCAGTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: QPEEFWMISHSV*KFMTAVTPSSC Trigger: GCATGAACTGGGAGTTACAGCTGTCATGAATTTCCAGACTGAATGGGATATCATCCAGAATTCTTCAGGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069106.5 |
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