Pregenerated sensors for EPHX3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037577Ensembl transcript IDs: ENSMUST00000087721.10, ENSMUST00000162117.3
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACTTCTTACAGGGTGGTGGCGGCGCACGCCTTTAATTCCAGCATTTaGGAGGCAGAAGCAGGCAGATCTCCAAGTTCAAGGTCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: TSYRVVAAHAFNSSI*EAEAGRSPSSRSAW Trigger: CCAGGCTGACCTTGAACTTGGAGATCTGCCTGCTTCTGCCTCTCAAATGCTGGAATTAAAGGCGTGCGCCGCCACCACCCTGTAAGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR TCA 90 bp | CAGATCTCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCTaGATGGCCAGGGCTACACAGAGAAACCCTATCTTGAAACACACA | + |
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Preference number: 1 (lower is better) Translates to: QISKFKVSLVYRVSS*MARATQRNPILKHT Trigger: TGTGTGTTTCAAGATAGGGTTTCTCTGTGTAGCCCTGGCCATTCAGGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR-3UTR CCA 90 bp | GGGTGGTGGCGGCGCACGCCTTTAATTCCAGCATTTGAGAGGCAGAAGCAGGCAGGTTTGTGTAGCCCTTaGGGGCAGGGAGGTTTTGAT | + |
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Preference number: 2 (lower is better) Translates to: GWWRRTPLIPAFERQKQAGLCSP*GQGGFD Trigger: ATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACC...TGCCTGCTTCTGCCTCTCAAATGCTGGAATTAAAGGCGTGCGCCGCCACCACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR-3UTR GCA 90 bp | GTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTAGTAAGACATCCACGCAGGTGGGGAGTGCACCCTTATaGACACACTGCATGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VALGGREVLISSKTSTQVGSAPL*THCMDS Trigger: GGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCC...CACCTGCGTGGATGTCTTACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAATGGCCAGGGCTACACAGAGAAACCCTATCTTGAAACACACACACACACAAGACATCCACGCAGGTaGGGCAAGATGCCCACAGAT | + |
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Preference number: 2 (lower is better) Translates to: LNGQGYTEKPYLETHTHTRHPRR*GKMPTD Trigger: ATCTGTGGGCATCTTGCCTCACCTGCGTGGATGTCT...TGTGTGTGTGTGTGTTTCAAGATAGGGTTTCTCTGTGTAGCCCTGGCCATTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR CAA 90 bp | AGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTaGATAAGTAGTAAGACATCCACGCAGGTGAGGCAAGATGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: RLEFMVCVALGGREV*ISSKTSTQVRQDAH Trigger: GTGGGCATCTTGCCTCACCTGCGTGGATGTCTTACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR CAA 90 bp | GAATGTCTGACTTGCATGTCTGTGTGTATGCTGCATGCATGCCTATaGCTCAGGGACACACACACACACACACACACACACACACACACA | + |
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Preference number: 2 (lower is better) Translates to: ECLTCMSVCMLHACL*LRDTHTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCCTGAGCAATAGGCATGCATGCAGCATACACACAGACATGCAAGTCAGACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR-3UTR CCA 90 bp | TTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTAGTTATGCACACACTGCATaGACTCCCAGGTACACAAGG | + |
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Preference number: 2 (lower is better) Translates to: LEFMVCVALGGREVLISSYAHTA*TPRYTR Trigger: CCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATA...ACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR CAA 90 bp | GGGACACACACACACACACACACACACACACACACACATTCCTTATaGACTTTTCTGTATGTAGGAATGTCTGACTTGCATGTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: GTHTHTHTHTHTHSL*TFLYVGMSDLHVCV Trigger: CACACAGACATGCAAGTCAGACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR CAA 90 bp | GCATGCATGCCTATTGCTCAGGGAGACACACACACACATTCCTTATaGACTTTTCTGTATGTAGGAATGTCTGACTTGCATGTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: ACMPIAQGDTHTHSL*TFLYVGMSDLHVCV Trigger: CACACAGACATGCAAGTCAGACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTCTCCCTGAGCAATAGGCATGCATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR CAA 90 bp | CACACACATTCCTTATTGACTTTTCTGTATGTAGGAATGTCTGACTaGCATGTCTGTGTGTATGCTGTATGCATGCCCATTGCTCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: HTHSLLTFLYVGMSD*HVCVYAVCMPIAQG Trigger: TCCCTGAGCAATGGGCATGCATACAGCATACACACAGACATGCAAGTCAGACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR CAA 90 bp | CACACACACACACTCACACACACACACACACACACACATTCCTTATaGACTTTTCTGTATGTAGGAATGTCTGACTTGCATGTCTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: HTHTLTHTHTHTHSL*TFLYVGMSDLHVCV Trigger: CACACAGACATGCAAGTCAGACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTGTGTGTGTGTGAGTGTGTGTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR CCA 72 bp | GGAGTTCTGGGAGTGCACCCTTATGCACACACTGCATaGACTCCCAGGTACACAAGGACAGGGGATATGTGC | + |
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Preference number: 3 (lower is better) Translates to: GVLGVHPYAHTA*TPRYTRTGDMC Trigger: GCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAGAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR GCA 72 bp | ACTCGGAGTTCTGGGAGTGCACCCTTATGCACACACTaGATGGACTCCCAGGTACACAAGGACAGGGGATAT | + |
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Preference number: 3 (lower is better) Translates to: TRSSGSAPLCTH*MDSQVHKDRGY Trigger: ATATCCCCTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAGAACTCCGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR TCA 72 bp | AGATCTCCAAGTTCAAGGTCAGCCTGGTCTACAGAGTaGGTTCCTGAATGGCCAGGGCTACACAGAGAAACC | + |
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Preference number: 3 (lower is better) Translates to: RSPSSRSAWSTE*VPEWPGLHRET Trigger: GGTTTCTCTGTGTAGCCCTGGCCATTCAGGAACTCACTCTGTAGACCAGGCTGACCTTGAACTTGGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR-3UTR CAA 90 bp | GGGTGGTGGCGGCGCACGCCTTTAATTCCAGCATTTGAGAGGCAGAAGCAGGCACACACACATTCCTTATaGACTTTTCTGTATGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: GWWRRTPLIPAFERQKQAHTHSL*TFLYVG Trigger: TCCTACATACAGAAAAGTCAATAAGGAATGTGTGTG...TGCCTGCTTCTGCCTCTCAAATGCTGGAATTAAAGGCGTGCGCCGCCACCACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR TCA 72 bp | CCTGAATGGCCAGGGCTACACAGAGAAACCCTATCTTaGAACACACACACACACACACACACACACACACTC | + |
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Preference number: 3 (lower is better) Translates to: PEWPGLHRETLS*NTHTHTHTHTL Trigger: GAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTCAAGATAGGGTTTCTCTGTGTAGCCCTGGCCATTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| 3UTR GCA 72 bp | GCATGGACTCCCAGGTACACAAGGACAGGGGATATGTaGTCCAACATATCAATGTTAGGCTGGCAAACAAGA | + |
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Preference number: 3 (lower is better) Translates to: AWTPRYTRTGDM*SNISMLGWQTR Trigger: TCTTGTTTGCCAGCCTAACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR TCA 72 bp | ACATTCCTTATTGACTTTTCTGTATGTAGGAATGTCTaGCTTGCATGTCTGTGTGTATGCTGCATGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: TFLIDFSVCRNV*LACLCVCCMHA Trigger: GGCATGCATGCAGCATACACACAGACATGCAAGTCAGACATTCCTACATACAGAAAAGTCAATAAGGAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR CCA 90 bp | GTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACAGGGGATCTGAGCCAGGGGTGCTaGCGCCAGCAGCCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: VHPYAHTAWTPRYTRTGDLSQGC*RQQPTT Trigger: GGTGGTGGGCTGCTGGCGCCAGCACCCCTGGCTCAG...ATCCCCTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR GCA 90 bp | CACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACAGGGGATATGGGCCGCAGCAGCCCCTaGGAGGACGGCACATCACAT | + |
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Preference number: 4 (lower is better) Translates to: HPYAHTAWTPRYTRTGDMGRSSP*EDGTSH Trigger: ATGTGATGTGCCGTCCTCGCAGGGGCTGCTGCGGCC...CATATCCCCTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | CTGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACAGGGATGGGTAGTAGATaGAGAACTCCCAGGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LGVHPYAHTAWTPRYTRTGMGSR*RTPRQG Trigger: CCCTTGCCTGGGAGTTCTCCATCTACTACCCATCCC...TGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR GCA 90 bp | GGGTGGTGGCGGCGCACGCCTTTAATTCCAGCATTTGAGAGGCAGAAGCAGGCATTCTCTGGGAAGCCATaGAGAAATAGCATGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GWWRRTPLIPAFERQKQAFSGKP*RNSMSG Trigger: GCCACTCATGCTATTTCTGCATGGCTTCCCAGAGAA...TGCCTGCTTCTGCCTCTCAAATGCTGGAATTAAAGGCGTGCGCCGCCACCACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR CCA 90 bp | TCTGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACCCAGTGCCCACTGCCTaGCAAAATGTGGCTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: SGSAPLCTHCMDSQVHKDPVPTA*QNVAFQ Trigger: TTGGAAAGCCACATTTTGCCAGGCAGTGGGCACTGG...GTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR TCA 90 bp | CATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAACATATCAATGTGCTGGTAGCGCCAGCTaGACCAGTTCTCTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HGLPGTQGQGICAPTYQCAGSAS*TSSLGS Trigger: GCTTCCCAGAGAACTGGTTCAGCTGGCGCTACCAGC...ACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR GCA 90 bp | GAAAGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAGGCCGCAGCAGCCCCTaGGAGGACGGCACATCACAT | + |
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Preference number: 4 (lower is better) Translates to: ERLEFMVCVALGGREVLIGRSSP*EDGTSH Trigger: ATGTGATGTGCCGTCCTCGCAGGGGCTGCTGCGGCC...TATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR TCA 90 bp | ATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAACATATCAATGTTGCTGGTAGCGCCAGCTaGACCAGTTCTCTGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: MDSQVHKDRGYVLQHINVAGSAS*TSSLGS Trigger: GCTTCCCAGAGAACTGGTTCAGCTGGCGCTACCAGC...AACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACATTCCTTATTGACTTTTCTGTATGTAGGAATGTCCTGAGCCAGGGGTGCTaGCGCCAGCAGCCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTFLIDFSVCRNVLSQGC*RQQPTT Trigger: GGTGGTGGGCTGCTGGCGCCAGCACCCCTGGCTCAG...GACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTGTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR TCA 90 bp | CGGCGCACGCCTTTAATTCCAGCATTTGAGAGGCAGAAGCAGGCAGATCTCCAAGAGGCATCCAGGTTGTaGGAAGTGATAAAGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: RRTPLIPAFERQKQADLQEASRL*EVIKEC Trigger: GCATTCCTTTATCACTTCTCACAACCTGGATGCCTC...TTGGAGATCTGCCTGCTTCTGCCTCTCAAATGCTGGAATTAAAGGCGTGCGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR TCA 90 bp | TCTGACTTGCATGTCTGTGTGTATGCTGCATGCATGCCTATTGCTCAGGGAGACCCAGGGGGAAGTTCCTaGACACGTTCCTGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SDLHVCVYAACMPIAQGDPGGSS*TRSCSS Trigger: ACTACTACAGGAACGTGTTCAGGAACTTCCCCCTGG...GTCTCCCTGAGCAATAGGCATGCATGCAGCATACACACAGACATGCAAGTCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR TCA 90 bp | CTGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACACTAGGATGGTATCCTTaGTGTCATCCAACAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: LGVHPYAHTAWTPRYTRTLGWYP*CHPTTS Trigger: ACTTGTTGTTGGATGACATCAAGGATACCATCCTAG...TGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| 3UTR CAA 72 bp | ACTTGCATGTCTGTGTGTATGCTGCATGCATGCCTATaGCTCAGGGACACACACACACACACACACACACAC | + |
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Preference number: 4 (lower is better) Translates to: TCMSVCMLHACL*LRDTHTHTHTH Trigger: GTGTGTGTGTGTGTGTGTGTGTGTGTCCCTGAGCAATAGGCATGCATGCAGCATACACACAGACATGCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR GCA 90 bp | ATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAACATATCAATGTTTTTGGGATTCCACCGTaGTATCGGAGTCCACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: MDSQVHKDRGYVLQHINVFGIPP*YRSPLD Trigger: GTCCAGTGGACTCCGATAGCACGGTGGAATCCCAAA...AACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | AGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTGGGATGGGTAGTAGATaGAGAACTCCCAGGCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: RLEFMVCVALGGREVLISGMGSR*RTPRQG Trigger: CCCTTGCCTGGGAGTTCTCCATCTACTACCCATCCC...ACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | GTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTAGTAAGACATCCACGCAGGTGAATATCTGGCCGATGTaGTGGATTGAGTATTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VALGGREVLISSKTSTQVNIWPM*WIEYSW Trigger: CCAAGAATACTCAATCCACCACATCGGCCAGATATT...CACCTGCGTGGATGTCTTACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | TATGCACACACTGCATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAATATCTGGCCGATGTaGTGGATTGAGTATTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: YAHTAWTPRYTRTGDMCSNIWPM*WIEYSW Trigger: CCAAGAATACTCAATCCACCACATCGGCCAGATATT...GGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | TGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACAGGTGTCTTTGAGAATCTaGAAGTCAGACATAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: WECTLMHTLHGLPGTQGQVSLRI*KSDIDN Trigger: GTTGTCTATGTCTGACTTCCAGATTCTCAAAGACAC...CTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | ATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAACATATCAATGTTCAAAGTGTCTTCCAATaGCTTCCACCAGCCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: MDSQVHKDRGYVLQHINVQSVFQ*LPPAPA Trigger: AGCAGGGGCTGGTGGAAGCCATTGGAAGACACTTTG...AACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR TCA 90 bp | GAAAGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATACCAGGGGGAAGTTCCTaGACACGTTCCTGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: ERLEFMVCVALGGREVLIPGGSS*TRSCSS Trigger: ACTACTACAGGAACGTGTTCAGGAACTTCCCCCTGG...TATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | GAAAGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGACAACAGCTTCTCTaGCAGCCAGGGAAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: ERLEFMVCVALGGREVLIRQQLL*QPGKLE Trigger: TTCCAGCTTCCCTGGCTGCCAGAGAAGCTGTTGTCT...TATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | TTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTAGTAAGACACAAAGTGTCTTCCAATaGCTTCCACCAGCCCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: FMVCVALGGREVLISSKTQSVFQ*LPPAPA Trigger: AGCAGGGGCTGGTGGAAGCCATTGGAAGACACTTTG...TGTCTTACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR GCA 90 bp | ATGCTTTTAGTCACTCAGCTGTCGGTCTTCCTGGCTTCAGAGACATTGTATTTTTTTGGGATTCCACCGTaGTATCGGAGTCCACTGGAC | + |
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Preference number: 4 (lower is better) Translates to: MLLVTQLSVFLASETLYFFGIPP*YRSPLD Trigger: GTCCAGTGGACTCCGATAGCACGGTGGAATCCCAAA...AAAATACAATGTCTCTGAAGCCAGGAAGACCGACAGCTGAGTGACTAAAAGCAT 47% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR CCA 90 bp | TTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTAGTAGACAACAGCTTCTCTaGCAGCCAGGGAAGCTGGAA | + |
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Preference number: 4 (lower is better) Translates to: LEFMVCVALGGREVLISSRQQLL*QPGKLE Trigger: TTCCAGCTTCCCTGGCTGCCAGAGAAGCTGTTGTCT...ACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | ATGCATGCCTATTGCTCAGGGAGACACACACACACATTCCTTATTGACTTTTCTCCAGTGCCCACTGCCTaGCAAAATGTGGCTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: MHAYCSGRHTHTFLIDFSPVPTA*QNVAFQ Trigger: TTGGAAAGCCACATTTTGCCAGGCAGTGGGCACTGG...AGAAAAGTCAATAAGGAATGTGTGTGTGTGTCTCCCTGAGCAATAGGCATGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR TCA 90 bp | AAACAAGACAGAAAGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGAGGCATCCAGGTTGTaGGAAGTGATAAAGGAATGC | + |
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Preference number: 4 (lower is better) Translates to: KQDRKVRIYGLCSPWGQGEASRL*EVIKEC Trigger: GCATTCCTTTATCACTTCTCACAACCTGGATGCCTC...TCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCTTTCTGTCTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR TCA 90 bp | CTCAGCTGTCGGTCTTCCTGGCTTCAGAGACATTGTATTTTTCATAGTGGTTCGCTAGGATGGTATCCTTaGTGTCATCCAACAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: LSCRSSWLQRHCIFHSGSLGWYP*CHPTTS Trigger: ACTTGTTGTTGGATGACATCAAGGATACCATCCTAG...CGAACCACTATGAAAAATACAATGTCTCTGAAGCCAGGAAGACCGACAGCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR TCA 90 bp | ATGCATGCCTATTGCTCAGGGAGACACACACACACATTCCTTATTGACTTTTCTATGCCGTTCTTGCGGTaGGTGAATGTGTCTTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: MHAYCSGRHTHTFLIDFSMPFLR*VNVSLR Trigger: TCTCAAAGACACATTCACTCACCGCAAGAACGGCAT...AGAAAAGTCAATAAGGAATGTGTGTGTGTGTCTCCCTGAGCAATAGGCATGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR GCA 90 bp | GTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTAGTAAGACATCCACGGAAGTGATAAAGGAATaGTTCAAGTTCAGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: VCVALGGREVLISSKTSTEVIKE*FKFRRS Trigger: ACTCCTTCTGAACTTGAAGCATTCCTTTATCACTTC...CGTGGATGTCTTACTACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | ATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAACATATCAATGTTGTGTCTTTGAGAATCTaGAAGTCAGACATAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: MDSQVHKDRGYVLQHINVVSLRI*KSDIDN Trigger: GTTGTCTATGTCTGACTTCCAGATTCTCAAAGACAC...AACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR GCA 90 bp | AGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTGAAGTGATAAAGGAATaGTTCAAGTTCAGAAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: RLEFMVCVALGGREVLISEVIKE*FKFRRS Trigger: ACTCCTTCTGAACTTGAAGCATTCCTTTATCACTTC...ACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CCA 90 bp | ACACACACACACACACACACATTCCTTATTGACTTTTCTGTATGTAGGAATGTCATCTGGCCGATGTGGTaGATTGAGTATTCTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: THTHTHTFLIDFSVCRNVIWPMW*IEYSWI Trigger: GATCCAAGAATACTCAATCCACCACATCGGCCAGAT...GACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS GCA 90 bp | GTGAGGGTGCGAGTAGCGCTGTCACCACAAACTCCGGCATATCCTTaGGCTCTGGGACGACTACAGAGCCGCCGTGGTCGGGAGACTGAG | + |
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Preference number: 5 (lower is better) Translates to: VRVRVALSPQTPAYP*ALGRLQSRRGRETE Trigger: CTCAGTCTCCCGACCACGGCGGCTCTGTAGTCGTCCCAGAGCGCAAGGATATGCCGGAGTTTGTGGTGACAGCGCTACTCGCACCCTCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS TCA 90 bp | TGCCATGACCAGCAGAGACATAGTGCAGACGCAGGCCGGAACTCCTaGGGGTTAGAAAGCAATGCTCGCCCAGCGTGGGGTCTCTCAGGC | + |
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Preference number: 5 (lower is better) Translates to: CHDQQRHSADAGRNS*GLESNARPAWGLSG Trigger: GCCTGAGAGACCCCACGCTGGGCGAGCATTGCTTTCTAACCCTCAGGAGTTCCGGCCTGCGTCTGCACTATGTCTCTGCTGGTCATGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | GGGTGGTGGCGGCGCACGCCTTTAATTCCAGCATTTGAGAGGCAGAAGCAGGCACTAGCCCAGCAGGTCTaGCAAGAAGGCCCACATGTA | + |
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Preference number: 5 (lower is better) Translates to: GWWRRTPLIPAFERQKQALAQQV*QEGPHV Trigger: TACATGTGGGCCTTCTTGCAAGACCTGCTGGGCTAG...TGCCTGCTTCTGCCTCTCAAATGCTGGAATTAAAGGCGTGCGCCGCCACCACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS GCA 90 bp | ACTGATGCATCTCCTGAGGATGGCTCTGTGGAATCCAGTGCCCACTaGCTGGCAAAATGTGGCTTTCCAACCGGCCGGGCACAAAGTGTC | + |
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Preference number: 5 (lower is better) Translates to: TDASPEDGSVESSAH*LAKCGFPTGRAQSV Trigger: GACACTTTGTGCCCGGCCGGTTGGAAAGCCACATTTTGCCAGGCAGTGGGCACTGGATTCCACAGAGCCATCCTCAGGAGATGCATCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 90 bp | CAAGAAGGCCCACATGTACTGATGCATCTCCTGAGGATGGCTCTGTaGAATCCAGTGCCCACTGCCTGGCAAAATGTGGCTTTCCAACCG | + |
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Preference number: 5 (lower is better) Translates to: QEGPHVLMHLLRMAL*NPVPTAWQNVAFQP Trigger: CGGTTGGAAAGCCACATTTTGCCAGGCAGTGGGCACTGGATTCCACAGAGCCATCCTCAGGAGATGCATCAGTACATGTGGGCCTTCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | GTTCTGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGCCCACCACCTTTGTTTaGGGATTCCACCGTGCTATC | + |
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Preference number: 5 (lower is better) Translates to: VLGVHPYAHTAWTPRYTRPTTFV*GFHRAI Trigger: GATAGCACGGTGGAATCCCAAAACAAAGGTGGTGGG...CCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | CTGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACACCCACCACCTTTGTTTaGGGATTCCACCGTGCTATC | + |
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Preference number: 5 (lower is better) Translates to: LGVHPYAHTAWTPRYTRTPTTFV*GFHRAI Trigger: GATAGCACGGTGGAATCCCAAAACAAAGGTGGTGGG...TGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | TGGGAGTGCACCCTTATGCACACACTGCATGGACTCCCAGGTACACAAGGACAGACAGGAACATGTAGTTaGATCGGAATATCTGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: WECTLMHTLHGLPGTQGQTGTCS*IGISGR Trigger: TCGGCCAGATATTCCGATCAAACTACATGTTCCTGT...CTGTCCTTGTGTACCTGGGAGTCCATGCAGTGTGTGCATAAGGGTGCACTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | CATGGACTCCCAGGTACACAAGGACAGGGGATATGTGCTCCAACATATCAATGTGCAACAGCGTGGGTGTaGACAGTTTCTTGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: HGLPGTQGQGICAPTYQCATAWV*TVSWAP Trigger: TGGAGCCCAAGAAACTGTCAACACCCACGCTGTTGC...ACATTGATATGTTGGAGCACATATCCCCTGTCCTTGTGTACCTGGGAGTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 90 bp | TGTGGTGGATTGAGTATTCTTGGATCACTGACATGGGAGGACCATTaGCCACAACCATACGCTCCACTAGGGATGGGTAGTAGATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: CGGLSILGSLTWEDH*PQPYAPLGMGSRWR Trigger: TCTCCATCTACTACCCATCCCTAGTGGAGCGTATGGTTGTGGCCAATGGTCCTCCCATGTCAGTGATCCAAGAATACTCAATCCACCACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS TCA 90 bp | CACGTTCCTGTAGTAGTTGATGGGCCCAGTGAGGCATCCAGGTTGTaGGAAGTGATAAAGGAATGCTTCAAGTTCAGAAGGAGTCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: HVPVVVDGPSEASRL*EVIKECFKFRRSQS Trigger: GGACTGACTCCTTCTGAACTTGAAGCATTCCTTTATCACTTCTCACAACCTGGATGCCTCACTGGGCCCATCAACTACTACAGGAACGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | AGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGAGGTTTTGATAAGTGCAACAGCGTGGGTGTaGACAGTTTCTTGGGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: RLEFMVCVALGGREVLISATAWV*TVSWAP Trigger: TGGAGCCCAAGAAACTGTCAACACCCACGCTGTTGC...ACTTATCAAAACCTCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | AAACAAGACAGAAAGGTTAGAATTTATGGTTTGTGTAGCCCTTGGGGGCAGGGACTAGCCCAGCAGGTCTaGCAAGAAGGCCCACATGTA | + |
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Preference number: 5 (lower is better) Translates to: KQDRKVRIYGLCSPWGQGLAQQV*QEGPHV Trigger: TACATGTGGGCCTTCTTGCAAGACCTGCTGGGCTAG...TCCCTGCCCCCAAGGGCTACACAAACCATAAATTCTAACCTTTCTGTCTTGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS TCA 90 bp | GCTTCAAGTTCAGAAGGAGTCAGTCCTGGGATGCCGTTCTTGCGGTaGGTGAATGTGTCTTTGAGAATCTGGAAGTCAGACATAGACAAC | + |
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Preference number: 5 (lower is better) Translates to: ASSSEGVSPGMPFLR*VNVSLRIWKSDIDN Trigger: GTTGTCTATGTCTGACTTCCAGATTCTCAAAGACACATTCACTCACCGCAAGAACGGCATCCCAGGACTGACTCCTTCTGAACTTGAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACATTCCTTATTGACTTTTCTGTATGTAGGAATGTCGGTGTTGACAGTTTCTaGGGCTCCAGGGGGAAGTTC | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTFLIDFSVCRNVGVDSF*GSRGKF Trigger: GAACTTCCCCCTGGAGCCCAAGAAACTGTCAACACC...GACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTGTGTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS-3UTR CAA 90 bp | ACACACACACACACACACACATTCCTTATTGACTTTTCTGTATGTAGGAATGTCACAGGAACATGTAGTTaGATCGGAATATCTGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: THTHTHTFLIDFSVCRNVTGTCS*IGISGR Trigger: TCGGCCAGATATTCCGATCAAACTACATGTTCCTGT...GACATTCCTACATACAGAAAAGTCAATAAGGAATGTGTGTGTGTGTGTGTGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087721.10 |
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| CDS TCA 72 bp | TCTGGGACGACTACAGAGCCGCCGTGGTCGGGAGACTaGGCCAGGGGTGCTGGCGCCAGCAGCCCACCACCT | + |
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Preference number: 6 (lower is better) Translates to: SGTTTEPPWSGD*ARGAGASSPPP Trigger: AGGTGGTGGGCTGCTGGCGCCAGCACCCCTGGCTCAGTCTCCCGACCACGGCGGCTCTGTAGTCGTCCCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 72 bp | AGGGGTGCTGGCGCCAGCAGCCCACCACCTTTGTTTTaGGATTCCACCGTGCTATCGGAGTCCACTGGACCG | + |
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Preference number: 6 (lower is better) Translates to: RGAGASSPPPLF*DSTVLSESTGP Trigger: CGGTCCAGTGGACTCCGATAGCACGGTGGAATCCCAAAACAAAGGTGGTGGGCTGCTGGCGCCAGCACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CAA 72 bp | CAGGGGTGCTGGCGCCAGCAGCCCACCACCTTTGTTTaGGGATTCCACCGTGCTATCGGAGTCCACTGGACC | + |
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Preference number: 6 (lower is better) Translates to: QGCWRQQPTTFV*GFHRAIGVHWT Trigger: GGTCCAGTGGACTCCGATAGCACGGTGGAATCCCAAAACAAAGGTGGTGGGCTGCTGGCGCCAGCACCCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS TCA 72 bp | CAGCAGAGACATAGTGCAGACGCAGGCCGGAACTCCTaGGGGTTAGAAAGCAATGCTCGCCCAGCGTGGGGT | + |
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Preference number: 6 (lower is better) Translates to: QQRHSADAGRNS*GLESNARPAWG Trigger: ACCCCACGCTGGGCGAGCATTGCTTTCTAACCCTCAGGAGTTCCGGCCTGCGTCTGCACTATGTCTCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162117.3 |
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| CDS CCA 72 bp | CTGAGGATGGCTCTGTGGAATCCAGTGCCCACTGCCTaGCAAAATGTGGCTTTCCAACCGGCCGGGCACAAA | + |
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Preference number: 6 (lower is better) Translates to: LRMALWNPVPTA*QNVAFQPAGHK Trigger: TTTGTGCCCGGCCGGTTGGAAAGCCACATTTTGCCAGGCAGTGGGCACTGGATTCCACAGAGCCATCCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 72 bp | CTCTGTGGAATCCAGTGCCCACTGCCTGGCAAAATGTaGCTTTCCAACCGGCCGGGCACAAAGTGTCTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LCGIQCPLPGKM*LSNRPGTKCLP Trigger: TGGAAGACACTTTGTGCCCGGCCGGTTGGAAAGCCACATTTTGCCAGGCAGTGGGCACTGGATTCCACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 72 bp | CCACATGTACTGATGCATCTCCTGAGGATGGCTCTGTaGAATCCAGTGCCCACTGCCTGGCAAAATGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PHVLMHLLRMAL*NPVPTAWQNVA Trigger: AGCCACATTTTGCCAGGCAGTGGGCACTGGATTCCACAGAGCCATCCTCAGGAGATGCATCAGTACATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS TCA 72 bp | AATGGCTCTGAAACTCTCGCAGCTGGTAGCGCCAGCTaGACCAGTTCTCTGGGAAGCCATGCAGAAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: NGSETLAAGSAS*TSSLGSHAEIA Trigger: TGCTATTTCTGCATGGCTTCCCAGAGAACTGGTTCAGCTGGCGCTACCAGCTGCGAGAGTTTCAGAGCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CAA 72 bp | CTGGCAGCCAGGGAAGCTGGAACAGGAACATGTAGTTaGATCGGAATATCTGGCCGATGTGGTGGATTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LAAREAGTGTCS*IGISGRCGGLS Trigger: ACTCAATCCACCACATCGGCCAGATATTCCGATCAAACTACATGTTCCTGTTCCAGCTTCCCTGGCTGCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 72 bp | TTGAGTATTCTTGGATCACTGACATGGGAGGACCATTaGCCACAACCATACGCTCCACTAGGGATGGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LSILGSLTWEDH*PQPYAPLGMGS Trigger: ACTACCCATCCCTAGTGGAGCGTATGGTTGTGGCCAATGGTCCTCCCATGTCAGTGATCCAAGAATACTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CAA 90 bp | ACAGGAACATGTAGTTTGATCGGAATATCTGGCCGATGTGGTGGATaGAGTATTCTTGGATCACTGACATGGGAGGACCATTGGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: TGTCSLIGISGRCGG*SILGSLTWEDHWPQ Trigger: TTGTGGCCAATGGTCCTCCCATGTCAGTGATCCAAGAATACTCAATCCACCACATCGGCCAGATATTCCGATCAAACTACATGTTCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS TCA 72 bp | GTAGTAGTTGATGGGCCCAGTGAGGCATCCAGGTTGTaGGAAGTGATAAAGGAATGCTTCAAGTTCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: VVVDGPSEASRL*EVIKECFKFRR Trigger: CCTTCTGAACTTGAAGCATTCCTTTATCACTTCTCACAACCTGGATGCCTCACTGGGCCCATCAACTACTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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| CDS CCA 72 bp | CAACAACAAGTCAATGGTGTAACAATCCACTTCCTTTaGAGCATCAGAGGGACTATAACCACGCATGTCTAC | + |
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Preference number: 6 (lower is better) Translates to: QQQVNGVTIHFL*SIRGTITTHVY Trigger: GTAGACATGCGTGGTTATAGTCCCTCTGATGCTCCAAAGGAAGTGGATTGTTACACCATTGACTTGTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087721.10 ENSMUST00000162117.3 |
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