Pregenerated sensors for EPHX1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038776Ensembl transcript IDs: ENSMUST00000036928.12, ENSMUST00000111068.8, ENSMUST00000147585.2, ENSMUST00000154133.8
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTaGAAGGGCACATCTTCCATAAGTATGACTGGGAAGGAACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: EVWVPQCGQGTNLFL*KGTSSISMTGKEPG Trigger: CCCTGGTTCCTTCCCAGTCATACTTATGGAAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| 3UTR CCA 72 bp | ATTCCTCTGGAAGGGCACATCTTCCATAAGTATGACTaGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTT | + |
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Preference number: 3 (lower is better) Translates to: IPLEGHIFHKYD*EGTRAAAKAMV Trigger: AACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCATACTTATGGAAGATGTGCCCTTCCAGAGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| 3UTR CCA 72 bp | GTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTaGAAGGGCACATCTTCCATAAGTATGACTGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: VPQCGQGTNLFL*KGTSSISMTGK Trigger: CTTCCCAGTCATACTTATGGAAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTGAGCCAGGCCAGCCGTaGACCATCAGCAAGGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTEPGQP*TISKGF Trigger: AAAGCCCTTGCTGATGGTGCACGGCTGGCCTGGCTC...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCCGGCCTGAGGGCAGCTaGGGAGGTTTCACGTGGATG | + |
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Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVRPEGS*GGFTWM Trigger: CATCCACGTGAAACCTCCCCAGCTGCCCTCAGGCCG...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCCAGGGACACGAACTTaGGGATGTCCTGGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTPGTRT*GCPGPE Trigger: TTCTGGCCCAGGACATCCGCAAGTTCGTGTCCCTGG...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCCAGGGACACGAACTTaGGGATGTCCTGGGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNPGTRT*GCPGPE Trigger: TTCTGGCCCAGGACATCCGCAAGTTCGTGTCCCTGG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTACTGCCCTCCAAAGGTaGGGATGCCCGGAACCTATC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTTALQR*GCPEPI Trigger: GATAGGTTCCGGGCATCCCCACCTTTGGAGGGCAGT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTCATCACTCAGGCCGTaGGTCTTGGGGTCTGTCAGC | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTSSLRP*VLGSVS Trigger: GCTGACAGACCCCAAGACCCACGGCCTGAGTGATGA...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCCTGGGCCAGAAGCTTaGGCTCTTCGAAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNPGPEA*ALRRQQ Trigger: TTGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCTTTGGAGTGCGGCCTaGGGGCAGCTGGGGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRLWSAA*GQLGRF Trigger: AAACCTCCCCAGCTGCCCTCAGGCCGCACTCCAAAG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCATAGTGGAAGCGACTaGCCTCCAAAGGTGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNHSGSD*PPKVGM Trigger: CATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCATAGTGGAAGCGACTaGCCTCCAAAGGTGGGGATG | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTHSGSD*PPKVGM Trigger: CATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATG...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCGGCCTGAGGGCAGCTaGGGAGGTTTCACGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRRPEGS*GGFTWM Trigger: CATCCACGTGAAACCTCCCCAGCTGCCCTCAGGCCG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCTCATCACTCAGGCCGTaGGTCTTGGGGTCTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVSSLRP*VLGSVS Trigger: GCTGACAGACCCCAAGACCCACGGCCTGAGTGATGA...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACAATCTCCCAAAACGTTaGCCCAGGAGAGGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNNLPKR*PRRGVR Trigger: CCTGACCCCTCTCCTGGGCCAACGTTTTGGGAGATT...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTAATCTCCCAAAACGTTaGCCCAGGAGAGGGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTNLPKR*PRRGVR Trigger: CCTGACCCCTCTCCTGGGCCAACGTTTTGGGAGATT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCCACAGTGTCCGGCTTaGTGGCCTGGATGTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTPQCPA*WPGCVS Trigger: ACTTACACATCCAGGCCACCAAGCCGGACACTGTGG...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCCACAGTGTCCGGCTTaGTGGCCTGGATGTGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNPQCPA*WPGCVS Trigger: ACTTACACATCCAGGCCACCAAGCCGGACACTGTGG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTATCCCCTCATGTCTATaGACCATGACACCCTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTIPSCL*TMTPWP Trigger: GGGCCAGGGTGTCATGGTCCATAGACATGAGGGGAT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACAACTTGCGGATGTCCTaGGCCAGAAGCTTGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNNLRMS*ARSLGS Trigger: AGAGCCCAAGCTTCTGGCCCAGGACATCCGCAAGTT...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCTGGAAGCCCAGCCGTaGCATCAGCTTGTAGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNLEAQP*HQLVED Trigger: ATCTTCTACAAGCTGATGTCACGGCTGGGCTTCCAG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTACTGCCCTCCAAAGGTaGGGATGCCCGGAACCTATC | + |
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Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLTALQR*GCPEPI Trigger: GATAGGTTCCGGGCATCCCCACCTTTGGAGGGCAGT...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTGGGGAGGTTTCACGTaGATGAAGTGGATGTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTWGGFT*MKWMSS Trigger: GCTGGACATCCACTTCATCCACGTGAAACCTCCCCA...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTGCTGGGAGGAGACAATaGTTCCTGTCGTCCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTAGRRQ*FLSSSR Trigger: TCTACTGGACGACAGGAACCATTGTCTCCTCCCAGC...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCTCAGGTAGCTGGAGTTaGAGCCATAGTGGAAGCGAC | + |
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Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVSGSWS*SHSGSD Trigger: GTCGCTTCCACTATGGCTTCAACTCCAGCTACCTGA...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCGAGGTTTCACGTGGATaGAGTGGATGTCCAGCCCTT | + |
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Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVEVSRG*SGCPAL Trigger: AAGGGCTGGACATCCACTTCATCCACGTGAAACCTC...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCCTTGCTGGATGCCTCTaGGAAGCCATAGCCAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVLAGCL*EAIARN Trigger: ATTCCTGGCTATGGCTTCTCAGAGGCATCCAGCAAG...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTATGACTTCAAACACGTaGTCATCACTCAGGCCGTGG | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTMTSNT*SSLRPW Trigger: CCACGGCCTGAGTGATGAGCACGTGTTTGAAGTCAT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCACTTTTCTGGGGCATaGAGGATCTCAGAAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNHFSGA*RISEGK Trigger: CTTCCCTTCTGAGATCCTGCATGCCCCAGAAAAGTG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCACTTTTCTGGGGCATaGAGGATCTCAGAAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTHFSGA*RISEGK Trigger: CTTCCCTTCTGAGATCCTGCATGCCCCAGAAAAGTG...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCGCTGGGAGGAGACAATaGTTCCTGTCGTCCAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVAGRRQ*FLSSSR Trigger: TCTACTGGACGACAGGAACCATTGTCTCCTCCCAGC...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACAGGCTGAATAGCCAGTaGGCACAAAGACCTTCATCC | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNRLNSQ*AQRPSS Trigger: GGATGAAGGTCTTTGTGCCCACTGGCTATTCAGCCT...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCTTCACCCACTTTTCTaGGGCATGCAGGATCTCAGA | + |
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Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTLHPLF*GMQDLR Trigger: TCTGAGATCCTGCATGCCCCAGAAAAGTGGGTGAAG...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTAACTTGCGGATGTCCTaGGCCAGAAGCTTGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLNLRMS*ARSLGS Trigger: AGAGCCCAAGCTTCTGGCCCAGGACATCCGCAAGTT...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTCTGATGTTTCCACCTTaGAGGGCCGGATGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLLMFPP*RAGCSH Trigger: ATGAGAGCATCCGGCCCTTCAAGGTGGAAACATCAG...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCACGGTATTCTGACTTaGTCCAGGTGGAGAACTTCT | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNHGILT*SRWRTS Trigger: AGAAGTTCTCCACCTGGACCAAGTCAGAATACCGTG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGATCCCCTCATGTCTATaGACCATGACACCCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRIPSCL*TMTPWP Trigger: GGGCCAGGGTGTCATGGTCCATAGACATGAGGGGAT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCTGATGTTTCCACCTTaGAGGGCCGGATGCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRLMFPP*RAGCSH Trigger: ATGAGAGCATCCGGCCCTTCAAGGTGGAAACATCAG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR TCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGAGTGTGGGTATTGGTTaGGGATCTCCACCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRSVGIG*GSPPAS Trigger: GGAAGCAGGTGGAGATCCTCAACCAATACCCACACT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR GCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCTCCAAAGGTGGGGATaGCCGGAACCTATCTATCCT | + |
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Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRLQRWG*PEPIYP Trigger: AGGATAGATAGGTTCCGGGCATCCCCACCTTTGGAG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCTGCTCTCATCTTCTTTaGCTGATGGCTTTGACCCTG | + |
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Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVCSHLL*LMALTL Trigger: CAGGGTCAAAGCCATCAGCCAAAGAAGATGAGAGCA...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTAAAGTGTGGGTATTaGTTGAGGATCTCCACCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNLKCGY*LRISTC Trigger: GCAGGTGGAGATCCTCAACCAATACCCACACTTTAA...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCTTCACGTGGATGAAGTaGATGTCCAGCCCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVFTWMK*MSSPSI Trigger: GATTGAAGGGCTGGACATCCACTTCATCCACGTGAA...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTCTTCACCCACTTTTCTaGGGCATGCAGGATCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLLHPLF*GMQDLR Trigger: TCTGAGATCCTGCATGCCCCAGAAAAGTGGGTGAAG...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTGCCATAGCCAGGAATTaGGGGACAGATGACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLAIARN*GTDDFK Trigger: TTTGAAGTCATCTGTCCCTCAATTCCTGGCTATGGC...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR GCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCCTATCTATCCTCTGGTaGAAGTCCTTGATCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVLSILW*KSLISS Trigger: TGAGGAGATCAAGGACTTGCACCAGAGGATAGATAG...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGATGACTTCAAACACGTaGTCATCACTCAGGCCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRMTSNT*SSLRPW Trigger: CCACGGCCTGAGTGATGAGCACGTGTTTGAAGTCAT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTTAAACCTTTCTTGCTaGATGCCTCTGAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTLNLSC*MPLRSH Trigger: ATGGCTTCTCAGAGGCATCCAGCAAGAAAGGTTTAA...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCCATAGCCAGGAATTaGGGGACAGATGACTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRAIARN*GTDDFK Trigger: TTTGAAGTCATCTGTCCCTCAATTCCTGGCTATGGC...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCAGCCACTCTCCCTCATaGTGTTGTAGAAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVSHSPS*CCRKPF Trigger: AAAAGGTTTTCTACAACATCATGAGGGAGAGTGGCT...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR GCA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTAATTTAAACCTTTCTTaGTGGATGCCTCTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EDSVGLKSGSPSVVREQTNLNLS*WMPLRS Trigger: GCTTCTCAGAGGCATCCAGCAAGAAAGGTTTAAATT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTTTAAAGTGTGGGTATTaGTTGAGGATCTCCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLLKCGY*LRISTC Trigger: GCAGGTGGAGATCCTCAACCAATACCCACACTTTAA...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGTTCACGTGGATGAAGTaGATGTCCAGCCCTTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRFTWMK*MSSPSI Trigger: GATTGAAGGGCTGGACATCCACTTCATCCACGTGAA...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTCTGACTTGGTCCAGGTaGAGAACTTCTCTAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLLTWSR*RTSLRC Trigger: ACATCTTAGAGAAGTTCTCCACCTGGACCAAGTCAG...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCACGGTATTCTGACTTaGTCCAGGTGGAGAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRHGILT*SRWRTS Trigger: AGAAGTTCTCCACCTGGACCAAGTCAGAATACCGTG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGTCTGGTGCAAGTCCTTaGTCTCCTCATCTGATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRSGASP*SPHLMF Trigger: AAACATCAGATGAGGAGATCAAGGACTTGCACCAGA...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTAGAAAACCTTTTCCTTaGATGGGTACAAGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLRKPFP*MGTRAP Trigger: TGGAGCTCTTGTACCCATTCAAGGAAAAGGTTTTCT...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTAGCCACTCTCCCTCATaGTGTTGTAGAAAACCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLSHSPS*CCRKPF Trigger: AAAAGGTTTTCTACAACATCATGAGGGAGAGTGGCT...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACAAAGACATATTCAAGTaGAAACCTTTCACGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNKDIFK*KPFTWL Trigger: CAACCACGTGAAAGGTTTGCACTTGAATATGTCTTT...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036928.12 |
||
| CDS-3UTR CCA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTTTAAACCTTTCTTGCTaGATGCCTCTGAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSPSVVREQTYSSGRAHLLNLSC*MPLRSH Trigger: ATGGCTTCTCAGAGGCATCCAGCAAGAAAGGTTTAA...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCTGACTTGGTCCAGGTaGAGAACTTCTCTAAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRLTWSR*RTSLRC Trigger: ACATCTTAGAGAAGTTCTCCACCTGGACCAAGTCAG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR TCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGAGAAAACCTTTTCCTTaGATGGGTACAAGAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRRKPFP*MGTRAP Trigger: TGGAGCTCTTGTACCCATTCAAGGAAAAGGTTTTCT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR GCA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGAATTTAAACCTTTCTTaGTGGATGCCTCTGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKSGSPSVVREQTYSSGRNLNLS*WMPLRS Trigger: GCTTCTCAGAGGCATCCAGCAAGAAAGGTTTAAATT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS TCA 90 bp | GCCAGGCCAGCCGTGCACCATCAGCAAGGGCTTTGGAGTGCGGCCTaGGGGCAGCTGGGGAGGTTTCACGTGGATGAAGTGGATGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ARPAVHHQQGLWSAA*GQLGRFHVDEVDVQ Trigger: CTGGACATCCACTTCATCCACGTGAAACCTCCCCAGCTGCCCTCAGGCCGCACTCCAAAGCCCTTGCTGATGGTGCACGGCTGGCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CCA 90 bp | GCTCAGCCAGGGACACGAACTTGCGGATGTCCTGGGCCAGAAGCTTaGGCTCTTCGAAGGCAGCAAAGTGGCCCCCACGTTCCATGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: AQPGTRTCGCPGPEA*ALRRQQSGPHVPCR Trigger: CCTACATGGAACGTGGGGGCCACTTTGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGGACATCCGCAAGTTCGTGTCCCTGGCTGAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCTCAGGCCGTGGGTCTaGGGGTCTGTCAGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNLRPWV*GSVSSG Trigger: CCCACTGCTGACAGACCCCAAGACCCACGGCCTGAG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
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| CDS-3UTR CAA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCTCAGGCCGTGGGTCTaGGGGTCTGTCAGCAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGLKSGSPSVVREQTLRPWV*GSVSSG Trigger: CCCACTGCTGACAGACCCCAAGACCCACGGCCTGAG...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CCA 90 bp | CCGTGCACCATCAGCAAGGGCTTTGGAGTGCGGCCTGAGGGCAGCTaGGGAGGTTTCACGTGGATGAAGTGGATGTCCAGCCCTTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: PCTISKGFGVRPEGS*GGFTWMKWMSSPSI Trigger: GATTGAAGGGCTGGACATCCACTTCATCCACGTGAAACCTCCCCAGCTGCCCTCAGGCCGCACTCCAAAGCCCTTGCTGATGGTGCACGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCTTTGGCTGATGGCTTaGACCCTGGGCCCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNLWLMA*TLGPTT Trigger: GGTGGTGGGGCCCAGGGTCAAAGCCATCAGCCAAAG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACCCATCAGCAAGGGCTTaGGAGTGCGGCCTGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNPSARA*ECGLRA Trigger: TGCCCTCAGGCCGCACTCCAAAGCCCTTGCTGATGG...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACGCCAGGGACACGAACTaGCGGATGTCCTGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNARDTN*RMSWAR Trigger: TCTGGCCCAGGACATCCGCAAGTTCGTGTCCCTGGC...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTCCTGGGCCAGAAGCTaGGGCTCTTCGAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGLKSGSPSVVREQTSWARS*GSSKAA Trigger: TGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGGA...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCGCCAGGGACACGAACTaGCGGATGTCCTGGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVARDTN*RMSWAR Trigger: TCTGGCCCAGGACATCCGCAAGTTCGTGTCCCTGGC...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCTTTGGCTGATGGCTTaGACCCTGGGCCCCACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LKSGSPSVVREQTYSSGRLWLMA*TLGPTT Trigger: GGTGGTGGGGCCCAGGGTCAAAGCCATCAGCCAAAG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCCATCAGCAAGGGCTTaGGAGTGCGGCCTGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSGSPSVVREQTYSSGRPSARA*ECGLRA Trigger: TGCCCTCAGGCCGCACTCCAAAGCCCTTGCTGATGG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACACCATCTGGGCTATGTaGGTGCAGATGAGAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNTIWAM*VQMRDP Trigger: GGGGTCTCTCATCTGCACCAACATAGCCCAGATGGT...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTAAATCTCCCAAAACGTaGGCCCAGGAGAGGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGLKSGSPSVVREQTKSPKT*AQERGQ Trigger: CTGACCCCTCTCCTGGGCCAACGTTTTGGGAGATTT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS GCA 90 bp | GGAGTTGAAGCCATAGTGGAAGCGACTGCCCTCCAAAGGTGGGGATaGCCGGAACCTATCTATCCTCTGGTGCAAGTCCTTGATCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GVEAIVEATALQRWG*PEPIYPLVQVLDLL Trigger: GAGGAGATCAAGGACTTGCACCAGAGGATAGATAGGTTCCGGGCATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATGGCTTCAACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 90 bp | CCAGGCCTCCATCCTCCAGTTCACGGTATTCTGACTTGGTCCAGGTaGAGAACTTCTCTAAGATGTAGGCAGCCAGGCCCACAGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGLHPPVHGILTWSR*RTSLRCRQPGPQES Trigger: ACTCTCCTGTGGGCCTGGCTGCCTACATCTTAGAGAAGTTCTCCACCTGGACCAAGTCAGAATACCGTGAACTGGAGGATGGAGGCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS-3UTR CAA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCACCATCTGGGCTATGTaGGTGCAGATGAGAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVTIWAM*VQMRDP Trigger: GGGGTCTCTCATCTGCACCAACATAGCCCAGATGGT...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGTCCTGGGCCAGAAGCTaGGGCTCTTCGAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSGSPSVVREQTYSSGRSWARS*GSSKAA Trigger: TGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGGA...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS TCA 90 bp | ACTCATTCCTCCAGAAGGACACCACTTTCTTCAGGTAGCTGGAGTTaGAGCCATAGTGGAAGCGACTGCCCTCCAAAGGTGGGGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: THSSRRTPLSSGSWS*SHSGSDCPPKVGMP Trigger: GGGCATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATGGCTTCAACTCCAGCTACCTGAAGAAAGTGGTGTCCTTCTGGAGGAATGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS TCA 90 bp | TGCTGGATGCCTCTGAGAAGCCATAGCCAGGAATTGAGGGACAGATaGCTTCAAACACGTGCTCATCACTCAGGCCGTGGGTCTTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CWMPLRSHSQELRDR*LQTRAHHSGRGSWG Trigger: ACCCCAAGACCCACGGCCTGAGTGATGAGCACGTGTTTGAAGTCATCTGTCCCTCAATTCCTGGCTATGGCTTCTCAGAGGCATCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS TCA 90 bp | AACCTTTCACGTGGTTGGGCACCATCTGGGCTATGTTGGTGCAGATaGGAGACCCCCAGTCGCCGCCTTGAATGTAGAACTTCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: NLSRGWAPSGLCWCR*ETPSRRLECRTSGS Trigger: GCTTCCAGAAGTTCTACATTCAAGGCGGCGACTGGGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAACCACGTGAAAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
||
| CDS CCA 90 bp | GTAGCTGGAGTTGAAGCCATAGTGGAAGCGACTGCCCTCCAAAGGTaGGGATGCCCGGAACCTATCTATCCTCTGGTGCAAGTCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VAGVEAIVEATALQR*GCPEPIYPLVQVLD Trigger: ATCAAGGACTTGCACCAGAGGATAGATAGGTTCCGGGCATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATGGCTTCAACTCCAGCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 90 bp | ACTTCCTCTCCAGGCCTCCATCCTCCAGTTCACGGTATTCTGACTTaGTCCAGGTGGAGAACTTCTCTAAGATGTAGGCAGCCAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSSPGLHPPVHGILT*SRWRTSLRCRQPGP Trigger: TGGGCCTGGCTGCCTACATCTTAGAGAAGTTCTCCACCTGGACCAAGTCAGAATACCGTGAACTGGAGGATGGAGGCCTGGAGAGGAAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTAAATCTCCCAAAACGTaGGCCCAGGAGAGGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPSVVREQTYSSGRAHLKSPKT*AQERGQ Trigger: CTGACCCCTCTCCTGGGCCAACGTTTTGGGAGATTT...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTATGCTCTCATCTTCTTaGGCTGATGGCTTTGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGLKSGSPSVVREQTMLSSS*ADGFDP Trigger: AGGGTCAAAGCCATCAGCCAAAGAAGATGAGAGCAT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTAAGTGTGGGTATTGGTaGAGGATCTCCACCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPSVVREQTYSSGRAHLKCGYW*RISTCF Trigger: GAAGCAGGTGGAGATCCTCAACCAATACCCACACTT...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCCTTAAAGTGTGGGTATaGGTTGAGGATCTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVLKVWV*VEDLHL Trigger: CAGGTGGAGATCCTCAACCAATACCCACACTTTAAG...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTCCAGCCCTTCAATCTaGGTCTTAAAGTGTGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNSSPSI*VLKCGY Trigger: ATACCCACACTTTAAGACCAAGATTGAAGGGCTGGA...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTCCAGCCCTTCAATCTaGGTCTTAAAGTGTGGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGLKSGSPSVVREQTSSPSI*VLKCGY Trigger: ATACCCACACTTTAAGACCAAGATTGAAGGGCTGGA...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGAAACCTTTCACGTGGTaGGGCACCATCTGGGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGSPSVVREQTYSSGRKPFTW*GTIWAM Trigger: CATAGCCCAGATGGTGCCCAACCACGTGAAAGGTTT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036928.12 |
||
| CDS-3UTR CAA 90 bp | GAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTATGAGTTTGGGGTACTaGACCTTCACCCACTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EDSVGLKSGSPSVVREQTMSLGY*TFTHFS Trigger: AGAAAAGTGGGTGAAGGTCAAGTACCCCAAACTCAT...AGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS TCA 90 bp | GGGAATAAATGTTTTTGGGCACCATCTGGGCTATGTTGGTGCAGATaGGAGACCCCCAGTCGCCGCCTTGAATGTAGAACTTCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GNKCFWAPSGLCWCR*ETPSRRLECRTSGS Trigger: GCTTCCAGAAGTTCTACATTCAAGGCGGCGACTGGGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAAAAACATTTATTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGACTCTGTGGGGTTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACGAATTTAAACCTTTCTaGCTGGATGCCTCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLCGVEVWVPQCGQGTNEFKPF*LDASEK Trigger: CTTCTCAGAGGCATCCAGCAAGAAAGGTTTAAATTC...GTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAACCCCACAGAGTCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | ATGACTGGGAAGGAACCAGGGCTGCTGCTAAAGCCATGGTTGGTGTGTAGCGTCATGAGTTTGGGGTACTaGACCTTCACCCACTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MTGKEPGLLLKPWLVCSVMSLGY*TFTHFS Trigger: AGAAAAGTGGGTGAAGGTCAAGTACCCCAAACTCAT...GACGCTACACACCAACCATGGCTTTAGCAGCAGCCCTGGTTCCTTCCCAGTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGATGCTCTCATCTTCTTaGGCTGATGGCTTTGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: LKSGSPSVVREQTYSSGRMLSSS*ADGFDP Trigger: AGGGTCAAAGCCATCAGCCAAAGAAGATGAGAGCAT...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | TTGAAGTCTGGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGCTTAAAGTGTGGGTATaGGTTGAGGATCTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKSGSPSVVREQTYSSGRLKVWV*VEDLHL Trigger: CAGGTGGAGATCCTCAACCAATACCCACACTTTAAG...CCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCCAGACTTCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS-3UTR CAA 90 bp | GGGTCCCCCAGTGTGGTCAGGGAACAAACTTATTCCTCTGGAAGGGCACATCTTGAATTTAAACCTTTCTaGCTGGATGCCTCTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSPSVVREQTYSSGRAHLEFKPF*LDASEK Trigger: CTTCTCAGAGGCATCCAGCAAGAAAGGTTTAAATTC...AAGATGTGCCCTTCCAGAGGAATAAGTTTGTTCCCTGACCACACTGGGGGACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CCA 90 bp | AAGTGGATGTCCAGCCCTTCAATCTTGGTCTTAAAGTGTGGGTATTaGTTGAGGATCTCCACCTGCTTCCTCCAGTCAAACTCATTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KWMSSPSILVLKCGY*LRISTCFLQSNSFL Trigger: GAGGAATGAGTTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGACATCCACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 90 bp | ATGTTTCTTGAAATGAAAGACATATTCAAGTGCAAACCTTTCACGTaGTTGGGCACCATCTGGGCTATGTTGGTGCAGATGAGAGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: MFLEMKDIFKCKPFT*LGTIWAMLVQMRDP Trigger: GGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAACCACGTGAAAGGTTTGCACTTGAATATGTCTTTCATTTCAAGAAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
||
| CDS TCA 72 bp | GCCGTGCACCATCAGCAAGGGCTTTGGAGTGCGGCCTaGGGGCAGCTGGGGAGGTTTCACGTGGATGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: AVHHQQGLWSAA*GQLGRFHVDEV Trigger: CACTTCATCCACGTGAAACCTCCCCAGCTGCCCTCAGGCCGCACTCCAAAGCCCTTGCTGATGGTGCACGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CCA 72 bp | GGGACACGAACTTGCGGATGTCCTGGGCCAGAAGCTTaGGCTCTTCGAAGGCAGCAAAGTGGCCCCCACGTT | + |
|
Preference number: 6 (lower is better) Translates to: GTRTCGCPGPEA*ALRRQQSGPHV Trigger: AACGTGGGGGCCACTTTGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGGACATCCGCAAGTTCGTGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CAA 72 bp | AGGGACACGAACTTGCGGATGTCCTGGGCCAGAAGCTaGGGCTCTTCGAAGGCAGCAAAGTGGCCCCCACGT | + |
|
Preference number: 6 (lower is better) Translates to: RDTNLRMSWARS*GSSKAAKWPPR Trigger: ACGTGGGGGCCACTTTGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGGACATCCGCAAGTTCGTGTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CCA 72 bp | ATCAGCAAGGGCTTTGGAGTGCGGCCTGAGGGCAGCTaGGGAGGTTTCACGTGGATGAAGTGGATGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISKGFGVRPEGS*GGFTWMKWMSS Trigger: GCTGGACATCCACTTCATCCACGTGAAACCTCCCCAGCTGCCCTCAGGCCGCACTCCAAAGCCCTTGCTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CCA 72 bp | TGCAGCTCAGCCAGGGACACGAACTTGCGGATGTCCTaGGCCAGAAGCTTGGGCTCTTCGAAGGCAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSSARDTNLRMS*ARSLGSSKAAK Trigger: CTTTGCTGCCTTCGAAGAGCCCAAGCTTCTGGCCCAGGACATCCGCAAGTTCGTGTCCCTGGCTGAGCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS TCA 72 bp | CGTGGTTGGGCACCATCTGGGCTATGTTGGTGCAGATaGGAGACCCCCAGTCGCCGCCTTGAATGTAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: RGWAPSGLCWCR*ETPSRRLECRT Trigger: AGTTCTACATTCAAGGCGGCGACTGGGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAACCACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
||
| CDS GCA 72 bp | GCCATAGTGGAAGCGACTGCCCTCCAAAGGTGGGGATaGCCGGAACCTATCTATCCTCTGGTGCAAGTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: AIVEATALQRWG*PEPIYPLVQVL Trigger: AAGGACTTGCACCAGAGGATAGATAGGTTCCGGGCATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 72 bp | GAGAGTCATTCAGAGCACAGCCCACAGTGTCCGGCTTaGTGGCCTGGATGTGTAAGTAGCCACTCTCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ESHSEHSPQCPA*WPGCVSSHSPS Trigger: TGAGGGAGAGTGGCTACTTACACATCCAGGCCACCAAGCCGGACACTGTGGGCTGTGCTCTGAATGACTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS TCA 72 bp | GCCGCCTTGAATGTAGAACTTCTGGAAGCCCAGCCGTaGCATCAGCTTGTAGAAGATCCTCGCAGTGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AALNVELLEAQP*HQLVEDPRSGH Trigger: GTGGCCACTGCGAGGATCTTCTACAAGCTGATGTCACGGCTGGGCTTCCAGAAGTTCTACATTCAAGGCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CCA 72 bp | GTTGAAGCCATAGTGGAAGCGACTGCCCTCCAAAGGTaGGGATGCCCGGAACCTATCTATCCTCTGGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: VEAIVEATALQR*GCPEPIYPLVQ Trigger: TTGCACCAGAGGATAGATAGGTTCCGGGCATCCCCACCTTTGGAGGGCAGTCGCTTCCACTATGGCTTCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
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| CDS TCA 72 bp | CCTCTGAGAAGCCATAGCCAGGAATTGAGGGACAGATaGCTTCAAACACGTGCTCATCACTCAGGCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLRSHSQELRDR*LQTRAHHSGRG Trigger: CCCACGGCCTGAGTGATGAGCACGTGTTTGAAGTCATCTGTCCCTCAATTCCTGGCTATGGCTTCTCAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CCA 72 bp | TTCAAGTGCAAACCTTTCACGTGGTTGGGCACCATCTaGGCTATGTTGGTGCAGATGAGAGACCCCCAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: FKCKPFTWLGTI*AMLVQMRDPQS Trigger: CGACTGGGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAACCACGTGAAAGGTTTGCACTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
||
| CDS CAA 90 bp | TCATCTGATGTTTCCACCTTGAAGGGCCGGATGCTCTCATCTTCTTaGGCTGATGGCTTTGACCCTGGGCCCCACCACCCATCTTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSDVSTLKGRMLSSS*ADGFDPGPHHPSSS Trigger: ACTTGAAGATGGGTGGTGGGGCCCAGGGTCAAAGCCATCAGCCAAAGAAGATGAGAGCATCCGGCCCTTCAAGGTGGAAACATCAGATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS TCA 72 bp | TCCAGAAGGACACCACTTTCTTCAGGTAGCTGGAGTTaGAGCCATAGTGGAAGCGACTGCCCTCCAAAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SRRTPLSSGSWS*SHSGSDCPPKV Trigger: CACCTTTGGAGGGCAGTCGCTTCCACTATGGCTTCAACTCCAGCTACCTGAAGAAAGTGGTGTCCTTCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS TCA 72 bp | TGTTTTTGGGCACCATCTGGGCTATGTTGGTGCAGATaGGAGACCCCCAGTCGCCGCCTTGAATGTAGAACT | + |
|
Preference number: 6 (lower is better) Translates to: CFWAPSGLCWCR*ETPSRRLECRT Trigger: AGTTCTACATTCAAGGCGGCGACTGGGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000111068.8 |
||
| CDS CCA 72 bp | CCTGAGGGCAGCTGGGGAGGTTTCACGTGGATGAAGTaGATGTCCAGCCCTTCAATCTTGGTCTTAAAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: PEGSWGGFTWMK*MSSPSILVLKC Trigger: ACACTTTAAGACCAAGATTGAAGGGCTGGACATCCACTTCATCCACGTGAAACCTCCCCAGCTGCCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 |
||
| CDS CCA 72 bp | ATCACTCAGGCCGTGGGTCTTGGGGTCTGTCAGCAGTaGGATAATCTTGTAGAACTCATAGAAGGAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ITQAVGLGVCQQ*DNLVELIEGAR Trigger: CCTGGCTCCTTCTATGAGTTCTACAAGATTATCCCACTGCTGACAGACCCCAAGACCCACGGCCTGAGTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CCA 72 bp | CATCCTCCAGTTCACGGTATTCTGACTTGGTCCAGGTaGAGAACTTCTCTAAGATGTAGGCAGCCAGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: HPPVHGILTWSR*RTSLRCRQPGP Trigger: TGGGCCTGGCTGCCTACATCTTAGAGAAGTTCTCCACCTGGACCAAGTCAGAATACCGTGAACTGGAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS GCA 72 bp | AAAGGTGGGGATGCCCGGAACCTATCTATCCTCTGGTaGAAGTCCTTGATCTCCTCATCTGATGTTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: KGGDARNLSILW*KSLISSSDVST Trigger: GGTGGAAACATCAGATGAGGAGATCAAGGACTTGCACCAGAGGATAGATAGGTTCCGGGCATCCCCACCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 72 bp | TCCAAAGGTGGGGATGCCCGGAACCTATCTATCCTCTaGTGCAAGTCCTTGATCTCCTCATCTGATGTTTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKGGDARNLSIL*CKSLISSSDVS Trigger: GGAAACATCAGATGAGGAGATCAAGGACTTGCACCAGAGGATAGATAGGTTCCGGGCATCCCCACCTTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 72 bp | TCCTCGCAGTGGCCACCGAATTTAAACCTTTCTTGCTaGATGCCTCTGAGAAGCCATAGCCAGGAATTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSQWPPNLNLSC*MPLRSHSQELR Trigger: CCTCAATTCCTGGCTATGGCTTCTCAGAGGCATCCAGCAAGAAAGGTTTAAATTCGGTGGCCACTGCGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CCA 72 bp | CCAGCCGTGACATCAGCTTGTAGAAGATCCTCGCAGTaGCCACCGAATTTAAACCTTTCTTGCTGGATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAVTSACRRSSQ*PPNLNLSCWMP Trigger: AGGCATCCAGCAAGAAAGGTTTAAATTCGGTGGCCACTGCGAGGATCTTCTACAAGCTGATGTCACGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CAA 90 bp | ATCCTCTGGTGCAAGTCCTTGATCTCCTCATCTGATGTTTCCACCTaGAAGGGCCGGATGCTCTCATCTTCTTTGGCTGATGGCTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ILWCKSLISSSDVST*KGRMLSSSLADGFD Trigger: GTCAAAGCCATCAGCCAAAGAAGATGAGAGCATCCGGCCCTTCAAGGTGGAAACATCAGATGAGGAGATCAAGGACTTGCACCAGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS GCA 72 bp | AGATCCTCGCAGTGGCCACCGAATTTAAACCTTTCTTaGTGGATGCCTCTGAGAAGCCATAGCCAGGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: RSSQWPPNLNLS*WMPLRSHSQEL Trigger: CAATTCCTGGCTATGGCTTCTCAGAGGCATCCAGCAAGAAAGGTTTAAATTCGGTGGCCACTGCGAGGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
||
| CDS CCA 72 bp | GTGGATGTCCAGCCCTTCAATCTTGGTCTTAAAGTGTaGGTATTGGTTGAGGATCTCCACCTGCTTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: VDVQPFNLGLKV*VLVEDLHLLPP Trigger: TGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGACATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CAA 90 bp | TGGATGTCCAGCCCTTCAATCTTGGTCTTAAAGTGTGGGTATTGGTaGAGGATCTCCACCTGCTTCCTCCAGTCAAACTCATTCCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: WMSSPSILVLKCGYW*RISTCFLQSNSFLQ Trigger: CTGGAGGAATGAGTTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGACATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS GCA 72 bp | GTCTTAAAGTGTGGGTATTGGTTGAGGATCTCCACCTaGTTCCTCCAGTCAAACTCATTCCTCCAGAAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VLKCGYWLRIST*FLQSNSFLQKD Trigger: GTCCTTCTGGAGGAATGAGTTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CCA 72 bp | TCCAGCCCTTCAATCTTGGTCTTAAAGTGTGGGTATTaGTTGAGGATCTCCACCTGCTTCCTCCAGTCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSPSILVLKCGY*LRISTCFLQSN Trigger: GTTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CAA 72 bp | TGCAAGTCCTTGATCTCCTCATCTGATGTTTCCACCTaGAAGGGCCGGATGCTCTCATCTTCTTTGGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: CKSLISSSDVST*KGRMLSSSLAD Trigger: ATCAGCCAAAGAAGATGAGAGCATCCGGCCCTTCAAGGTGGAAACATCAGATGAGGAGATCAAGGACTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
||
| CDS CAA 72 bp | GTCCAGCCCTTCAATCTTGGTCTTAAAGTGTGGGTATaGGTTGAGGATCTCCACCTGCTTCCTCCAGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: VQPFNLGLKVWV*VEDLHLLPPVK Trigger: TTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
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| CDS CAA 90 bp | GAAGTGGATGTCCAGCCCTTCAATCTTGGTCTTAAAGTGTGGGTATaGGTTGAGGATCTCCACCTGCTTCCTCCAGTCAAACTCATTCCT | + |
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Preference number: 6 (lower is better) Translates to: EVDVQPFNLGLKVWV*VEDLHLLPPVKLIP Trigger: AGGAATGAGTTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGACATCCACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
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| CDS CAA 90 bp | TTTCTTGAAATGAAAGACATATTCAAGTGCAAACCTTTCACGTGGTaGGGCACCATCTGGGCTATGTTGGTGCAGATGAGAGACCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: FLEMKDIFKCKPFTW*GTIWAMLVQMRDPQ Trigger: CTGGGGGTCTCTCATCTGCACCAACATAGCCCAGATGGTGCCCAACCACGTGAAAGGTTTGCACTTGAATATGTCTTTCATTTCAAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
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| CDS CAA 72 bp | AGCCCTTCAATCTTGGTCTTAAAGTGTGGGTATTGGTaGAGGATCTCCACCTGCTTCCTCCAGTCAAACTCA | + |
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Preference number: 6 (lower is better) Translates to: SPSILVLKCGYW*RISTCFLQSNS Trigger: TGAGTTTGACTGGAGGAAGCAGGTGGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
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| CDS CAA 72 bp | TTCACGTGGATGAAGTGGATGTCCAGCCCTTCAATCTaGGTCTTAAAGTGTGGGTATTGGTTGAGGATCTCC | + |
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Preference number: 6 (lower is better) Translates to: FTWMKWMSSPSI*VLKCGYWLRIS Trigger: GGAGATCCTCAACCAATACCCACACTTTAAGACCAAGATTGAAGGGCTGGACATCCACTTCATCCACGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000147585.2 |
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| CDS CCA 72 bp | GAAATGAAAGACATATTCAAGTGCAAACCTTTCACGTaGTTGGGCACCATCTGGGCTATGTTGGTGCAGATG | + |
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Preference number: 6 (lower is better) Translates to: EMKDIFKCKPFT*LGTIWAMLVQM Trigger: CATCTGCACCAACATAGCCCAGATGGTGCCCAACCACGTGAAAGGTTTGCACTTGAATATGTCTTTCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
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| CDS CCA 72 bp | CTCCCTCATGATGTTGTAGAAAACCTTTTCCTTGAATaGGTACAAGAGCTCCAGATCCTTCTCTGTGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: LPHDVVENLFLE*VQELQILLCVA Trigger: GGCTACACAGAGAAGGATCTGGAGCTCTTGTACCCATTCAAGGAAAAGGTTTTCTACAACATCATGAGGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000036928.12 ENSMUST00000111068.8 ENSMUST00000154133.8 |
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| CDS CAA 72 bp | ATGAAAGACATATTCAAGTGCAAACCTTTCACGTGGTaGGGCACCATCTGGGCTATGTTGGTGCAGATGAGA | + |
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Preference number: 6 (lower is better) Translates to: MKDIFKCKPFTW*GTIWAMLVQMR Trigger: TCTCATCTGCACCAACATAGCCCAGATGGTGCCCAACCACGTGAAAGGTTTGCACTTGAATATGTCTTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036928.12 ENSMUST00000154133.8 |
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